Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0002927

Physical Location & Seq

Genomic Coordinates Forward (+)

15284457 .. 15287987

Gene Structure 3531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG173800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGAAATGGAAGACCAGTATGGTTTAGGAGATCTCAGGCAGCTCATGAACGGAACTGGTAGGTCTCACTTCCCGGCCATCCAGACTCCGACGGAGCTCTTCCCCAGTAGCCACCACCATAGGCCTCAGCTCCTCGCTCCGGCCCATCATCATCATCATCATCAGCATCAGCAGCAGCAGCAGCATCCCTACGAAATCATGATGATGGGCCGGCTTCAGACCGCCCACGACATCATACCACGTGGGATTCATGAGTTTCGGTCTGCTGACTCGGCCGGTGGTTGTGGTGGTGGTGGTGGTGCTTGTACTAATAATACTGTTGCGGCTACTTCTTCTCTCAGTGGCGGCGGTGGTCTGGAGGCTGAGGGCGGAGGCTGTCTCGGCGGTGATGGCGGGTCCGGGAGGTGGCCGAGGCAAGAGACTCTCACGCTTCTGGAGATCCGGTCACGACTCGATTACAAGTTCAAAGAGGCTAATCAAAAAGGGCCGCTCTGGGATGAAGTCTCTAGGATCATGTGTGAGGAACATGGGTATCAAAGAAGCGGAAAAAAATGCAGGGAAAAATTCGAAAACTTATACAAGTATTACAAGAAGACAAAGGAAGGGAAGGCCGGAAGACAAGATGGAAAGCACTATAGATTCTTTCGGCAGCTTGAAGCTCTCTATGGCGAAACTAGCAACAACATTGCCGTCTCATCACTCCCACCAGATCAATCCCATTTCGTCGGTAATAATAATATCAATAACAATAATAATACTTTTCGTTATCAAGCTCAACCGAGTCATCAAGATACTACTACCGCTACTACTTATCAGTCCACTCAAAGCGTCTCGAACTCTTCCGATTTCGAGGACTCGTCTTCCTCGGAGGACAACGACGGCAGTGCCATTGCTCCGATGGACGATGAAGTGCTTGAGATGAAGAGGACGAGGAAGAGGAGGGGATGGAAGGTAAAGATAAAGGAGTTTATCGACGTGCAAATGAGGAAGATGATGGAGAAGCAAGAGGAGTGGTTGGAGAAGCTGATGGGCACGCTTGAGCAGAAAGAAAGGGAGAGGGTGTTGAGAGAGGAAGAGTGGCGAAAACAAGAGGCGGGCCGGGTGGAGCGAGAGCAGCAGTTTTGGGCTAAAGAGAGAGCTTGGATTGAAGCAAGGGATAAAGCTCTCATGGATGCATTGCAGAAATTAACAGGAAGTAGTACTAGTCATGAAGTAAAGACTTCTTCTTCAACCCCTGATCATGATCATGAGGATATTGTGAGTGAGCAAGAGACATGGCCGGAATGCGAGATTAACAAATTGATTCAGTTGAGAGGAAGCATGGAGTCGAGGTTTAGTACTAGTCAGAGAGGTGGGTGTGTGGAGGAAAGACTTTGGGAGGAGATAGCGGCGAAGATGAGTTGTTTGGGATATGAAAGGAGTGGAATGGTCTGCAAGGAGAAATGGGAGAGCATAAACTATGTGAGGAAGTGTTCCAAAGAGTTGTTCAGTAAGAAGAGGAAGGAGAACAATTCAAGGTCAAGCTCTTGTTACTTTGGGAACAATGAGTCAAATTCCTCATTGTATAGTAGTCAAGGAGGAGTCTATGCTACATGTGAAATGAATAATCATGAACAAGGTAATGGTGGTTCTCCCTCTAATAATCCAAATGTAGGCAATGCTGCAGTGGTGAACGACACTTGTTTTCCATTTTTGATGGGCGAAGGAGACAATTTGTGGGAGAACTACGGGTTGAAGCTCAGCAAGGGTAGCCAAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009798 GO:0009889 GO:0009908 GO:0009909 GO:0010016 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045926 GO:0046620 GO:0046621 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048439 GO:0048441 GO:0048442 GO:0048444 GO:0048446 GO:0048464 GO:0048465 GO:0048498 GO:0048519 GO:0048559 GO:0048560 GO:0048580 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090428 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090707 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

587

Amino Acids

66.56

Weight (kDa)

6.29

Isoelectric Point (pI)

53.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	135 - 221	4.8e-21	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	425 - 501	1e-12	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10000 AT3G10000 AT5G03680
fragaria_vesca	FvH4_6g17990 FvH4_6g17990 FvH4_7g05970
malus_domestica	MD02G1247700.v1.1 MD07G1068800.v1.1 MD12G1018900.v1.1 MD14G1016900.v1.1
prunus_persica	Prupe.2G086500_v2.0.a1 Prupe.7G116400_v2.0.a1
pyrus_communis	pycom02g21160 pycom07g05290 pycom12g01570 pycom14g01450
rosa_chinensis	RchiOBHm_Chr1g0333231 RchiOBHm_Chr3g0472271
rosa_laevigata	RLG00000024094 RLG00000029619
rosa_multiflora	Rmu_sc0001214.1_g000051 Rmu_sc0008192.1_g000003
rosa_roxburghii	Rroxscaffold_4G00317680 Rroxscaffold_6G00409120
rosa_rugosa	Rorug01G0108100 Rorug03G0123400
rosa_samantha	Rh1AG131100 Rh1BG100500 Rh1CG125000 Rh1DG136500 Rh3AG175700 Rh3BG201200 Rh3CG192500 Rh3CG199600 Rh3CG199700 Rh3DG173800
rosa_wichuraiana	Rw1G010840 Rw3G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	490
AclWI	GGATC	2 cut(s)	433, 518
AcoI	YGGCCR	4 cut(s)	75, 273, 407, 1277
AcsI	RAATTY	2 cut(s)	563, 1552
AcuI	CTGAAG	1 cut(s)	200
AcvI	CACGTG	1 cut(s)	242
AfaI	GTAC	3 cut(s)	307, 1201, 1339
AfiI	CCNNNNNNNGG	3 cut(s)	139, 405, 1652
AflIII	ACRYGT	1 cut(s)	1592
AgsI	TTSAA	6 cut(s)	466, 656, 1148, 1230, 1515, 1735
AhlI	ACTAGT	2 cut(s)	1202, 1340
AjiI	CACGTC	1 cut(s)	976
AjuI	GAANNNNNNNTTGG	2 cut(s)	1469, 1501
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	8 cut(s)	69, 383, 413, 508, 697, 835, 1265, 1701
AlwI	GGATC	2 cut(s)	433, 518
ApeKI	GCWGC	8 cut(s)	40, 172, 175, 178, 181, 649, 1114, 1661
ApoI	RAATTY	2 cut(s)	563, 1552
AspS9I	GGNCC	5 cut(s)	142, 208, 396, 485, 1096
AsuC2I	CCSGG	3 cut(s)	74, 400, 1100
AsuHPI	GGTGA	2 cut(s)	398, 1681
AsuII	TTCGAA	1 cut(s)	567
AvaII	GGWCC	1 cut(s)	396
BaeGI	GKGCMC	1 cut(s)	1034
BaeI	ACNNNNGTAYC	2 cut(s)	515, 548
BanII	GRGCYC	1 cut(s)	99
BbrPI	CACGTG	1 cut(s)	242
BbsI	GAAGAC	4 cut(s)	18, 599, 622, 852
Bbv12I	GWGCWC	1 cut(s)	99
BbvCI	CCTCAGC	2 cut(s)	126, 363
BbvI	GCAGC	8 cut(s)	52, 184, 187, 190, 193, 661, 1126, 1648
BceAI	ACGGC	2 cut(s)	674, 895
BcgI	CGANNNNNNTGC	2 cut(s)	866, 900
BclI	TGATCA	2 cut(s)	1237, 1243
BcnI	CCSGG	3 cut(s)	74, 400, 1100
BcoDI	GTCTC	8 cut(s)	69, 383, 413, 508, 697, 835, 1265, 1701
BcuI	ACTAGT	2 cut(s)	1202, 1340
BfaI	CTAG	4 cut(s)	507, 675, 1203, 1341
BfmI	CTRYAG	2 cut(s)	634, 1662
BglII	AGATCT	1 cut(s)	31
BlpI	GCTNAGC	1 cut(s)	1739
BmcAI	AGTACT	2 cut(s)	1201, 1339
Bme1390I	CCNGG	3 cut(s)	74, 400, 1100
Bme18I	GGWCC	1 cut(s)	396
BmgBI	CACGTC	1 cut(s)	976
BmgT120I	GGNCC	5 cut(s)	142, 208, 396, 485, 1096
BmiI	GGNNCC	1 cut(s)	397
BmrFI	CCNGG	3 cut(s)	74, 400, 1100
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	3 cut(s)	175, 193, 1162
BmuI	ACTGGG	1 cut(s)	99
BpiI	GAAGAC	4 cut(s)	18, 599, 622, 852
BplI	GAGNNNNNCTC	2 cut(s)	363, 395
BpmI	CTGGAG	2 cut(s)	377, 455
Bpu10I	CCTNAGC	2 cut(s)	126, 363
Bpu1102I	GCTNAGC	1 cut(s)	1739
Bpu14I	TTCGAA	1 cut(s)	567
BpuEI	CTTGAG	2 cut(s)	935, 1058
BpuMI	CCSGG	3 cut(s)	74, 400, 1100
BsaAI	YACGTR	1 cut(s)	242
BsaBI	GATNNNNATC	1 cut(s)	1242
BsaI	GGTCTC	1 cut(s)	69
BsaJI	CCNNGG	2 cut(s)	410, 864
BsaWI	WCCGGW	1 cut(s)	441
BsaXI	ACNNNNNCTCC	6 cut(s)	428, 458, 1046, 1076, 1316, 1346
Bsc4I	CCNNNNNNNGG	3 cut(s)	139, 405, 1652
Bse118I	RCCGGY	2 cut(s)	210, 275
Bse1I	ACTGG	4 cut(s)	16, 61, 105, 1759
Bse3DI	GCAATG	4 cut(s)	684, 888, 1175, 1663
Bse8I	GATNNNNATC	1 cut(s)	1242
BseDI	CCNNGG	2 cut(s)	410, 864
BseGI	GGATG	5 cut(s)	78, 184, 502, 950, 1177
BseJI	GATNNNNATC	1 cut(s)	1242
BseLI	CCNNNNNNNGG	3 cut(s)	139, 405, 1652
BseMI	GCAATG	4 cut(s)	684, 888, 1175, 1663
BseMII	CTCAG	5 cut(s)	49, 140, 352, 354, 1753
BseNI	ACTGG	4 cut(s)	16, 61, 105, 1759
BseRI	GAGGAG	5 cut(s)	122, 952, 1022, 1394, 1593
BseSI	GKGCMC	1 cut(s)	1034
BseX3I	CGGCCG	1 cut(s)	273
BseXI	GCAGC	8 cut(s)	52, 184, 187, 190, 193, 661, 1126, 1648
Bsh1285I	CGRYCG	1 cut(s)	276
BsiEI	CGRYCG	1 cut(s)	276
BsiHKAI	GWGCWC	1 cut(s)	99
BsiSI	CCGG	9 cut(s)	74, 140, 211, 276, 399, 442, 612, 1099, 1280
BslI	CCNNNNNNNGG	3 cut(s)	139, 405, 1652
BsmAI	GTCTC	8 cut(s)	69, 383, 413, 508, 697, 835, 1265, 1701
BsmBI	CGTCTC	2 cut(s)	697, 835
BsmI	GAATGC	1 cut(s)	1289
Bso31I	GGTCTC	1 cut(s)	69
Bsp119I	TTCGAA	1 cut(s)	567
Bsp1286I	GDGCHC	2 cut(s)	99, 1034
Bsp143I	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
Bsp1720I	GCTNAGC	1 cut(s)	1739
BspCNI	CTCAG	5 cut(s)	48, 139, 351, 355, 1752
BspHI	TCATGA	7 cut(s)	45, 198, 250, 1207, 1240, 1246, 1609
BspLI	GGNNCC	1 cut(s)	397
BspMAI	CTGCAG	1 cut(s)	1666
BspPI	GGATC	2 cut(s)	433, 518
BspQI	GCTCTTC	1 cut(s)	104
BspT104I	TTCGAA	1 cut(s)	567
BspTNI	GGTCTC	1 cut(s)	69
BsrBI	CCGCTC	1 cut(s)	490
BsrDI	GCAATG	4 cut(s)	684, 888, 1175, 1663
BsrFI	RCCGGY	2 cut(s)	210, 275
BsrI	ACTGG	4 cut(s)	16, 61, 105, 1759
BssAI	RCCGGY	2 cut(s)	210, 275
BssECI	CCNNGG	2 cut(s)	410, 864
BssMI	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
Bst4CI	ACNGT	1 cut(s)	319
Bst6I	CTCTTC	6 cut(s)	104, 844, 917, 929, 1068, 1490
BstBAI	YACGTR	1 cut(s)	242
BstBI	TTCGAA	1 cut(s)	567
BstC8I	GCNNGC	3 cut(s)	212, 1034, 1096
BstDEI	CTNAG	5 cut(s)	35, 126, 338, 363, 1739
BstF5I	GGATG	5 cut(s)	78, 184, 502, 950, 1177
BstKTI	GATC	6 cut(s)	34, 441, 513, 712, 1240, 1246
BstMAI	GTCTC	8 cut(s)	69, 383, 413, 508, 697, 835, 1265, 1701
BstMBI	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
BstMCI	CGRYCG	1 cut(s)	276
BstMWI	GCNNNNNNNGC	9 cut(s)	172, 178, 181, 272, 381, 390, 675, 1114, 1749
BstNSI	RCATGY	1 cut(s)	1596
BstSCI	CCNGG	3 cut(s)	72, 398, 1098
BstSFI	CTRYAG	2 cut(s)	634, 1662
BstSLI	GKGCMC	1 cut(s)	1034
BstV1I	GCAGC	8 cut(s)	52, 184, 187, 190, 193, 661, 1126, 1648
BstV2I	GAAGAC	4 cut(s)	18, 599, 622, 852
BstX2I	RGATCY	2 cut(s)	31, 438
BstYI	RGATCY	2 cut(s)	31, 438
BstZI	CGGCCG	1 cut(s)	273
BtrI	CACGTC	1 cut(s)	976
BtsCI	GGATG	5 cut(s)	78, 184, 502, 950, 1177
BtsI	GCAGTG	2 cut(s)	889, 1671
BtsIMutI	CAGTG	3 cut(s)	346, 889, 1671
Cac8I	GCNNGC	3 cut(s)	212, 1034, 1096
CciI	TCATGA	7 cut(s)	45, 198, 250, 1207, 1240, 1246, 1609
Cfr10I	RCCGGY	2 cut(s)	210, 275
Cfr13I	GGNCC	5 cut(s)	142, 208, 396, 485, 1096
CseI	GACGC	1 cut(s)	817
Csp6I	GTAC	3 cut(s)	306, 1200, 1338
CspCI	CAANNNNNGTGG	2 cut(s)	992, 1027
CviQI	GTAC	3 cut(s)	306, 1200, 1338
DdeI	CTNAG	5 cut(s)	35, 126, 338, 363, 1739
DpnI	GATC	6 cut(s)	33, 440, 512, 711, 1239, 1245
DpnII	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
EaeI	YGGCCR	4 cut(s)	75, 273, 407, 1277
EagI	CGGCCG	1 cut(s)	273
Eam1104I	CTCTTC	6 cut(s)	104, 844, 917, 929, 1068, 1490
EarI	CTCTTC	6 cut(s)	104, 844, 917, 929, 1068, 1490
EciI	GGCGGA	1 cut(s)	384
Ecl136II	GAGCTC	1 cut(s)	97
EclXI	CGGCCG	1 cut(s)	273
Eco147I	AGGCCT	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	396
Eco52I	CGGCCG	1 cut(s)	273
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	1 cut(s)	200
Eco72I	CACGTG	1 cut(s)	242
EcoICRI	GAGCTC	1 cut(s)	97
EcoT22I	ATGCAT	1 cut(s)	1177
EcoT38I	GRGCYC	1 cut(s)	99
Esp3I	CGTCTC	2 cut(s)	697, 835
FauI	CCCGC	2 cut(s)	386, 1087
FbaI	TGATCA	2 cut(s)	1237, 1243
FokI	GGATG	5 cut(s)	65, 171, 509, 957, 1184
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	4 cut(s)	507, 675, 1203, 1341
GsuI	CTGGAG	2 cut(s)	377, 455
HapII	CCGG	9 cut(s)	74, 140, 211, 276, 399, 442, 612, 1099, 1280
HgaI	GACGC	1 cut(s)	817
HpaII	CCGG	9 cut(s)	74, 140, 211, 276, 399, 442, 612, 1099, 1280
HphI	GGTGA	2 cut(s)	398, 1681
Hpy166II	GTNNAC	2 cut(s)	819, 1672
Hpy188I	TCNGA	6 cut(s)	90, 219, 844, 868, 897, 1347
Hpy8I	GTNNAC	2 cut(s)	819, 1672
Hpy99I	CGWCG	4 cut(s)	94, 728, 881, 977
HpyAV	CCTTC	5 cut(s)	596, 601, 943, 1495, 1697
HpyCH4III	ACNGT	1 cut(s)	319
HpyCH4IV	ACGT	2 cut(s)	241, 975
HpyCH4V	TGCA	6 cut(s)	555, 979, 1175, 1180, 1434, 1664
HpyF10VI	GCNNNNNNNGC	9 cut(s)	172, 178, 181, 272, 381, 390, 675, 1114, 1749
HpyF3I	CTNAG	5 cut(s)	35, 126, 338, 363, 1739
HpySE526I	ACGT	2 cut(s)	241, 975
KroI	GCCGGC	1 cut(s)	210
KroNI	GCCGGC	1 cut(s)	212
Ksp22I	TGATCA	2 cut(s)	1237, 1243
Kzo9I	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	5 cut(s)	94, 135, 142, 898, 1105
Lsp1109I	GCAGC	8 cut(s)	52, 184, 187, 190, 193, 661, 1126, 1648
LweI	GCATC	3 cut(s)	175, 193, 1162
MaeI	CTAG	4 cut(s)	507, 675, 1203, 1341
MaeII	ACGT	2 cut(s)	241, 975
MaeIII	GTNAC	2 cut(s)	444, 1529
MalI	GATC	6 cut(s)	33, 440, 512, 711, 1239, 1245
MbiI	CCGCTC	1 cut(s)	490
MboI	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
MflI	RGATCY	2 cut(s)	31, 438
MhlI	GDGCHC	2 cut(s)	99, 1034
MluCI	AATT	6 cut(s)	563, 1184, 1298, 1510, 1552, 1711
MlyI	GAGTC	9 cut(s)	79, 263, 415, 444, 790, 848, 1334, 1556, 1590
MmeI	TCCRAC	2 cut(s)	113, 996
Mph1103I	ATGCAT	1 cut(s)	1177
MroNI	GCCGGC	1 cut(s)	210
MseI	TTAA	2 cut(s)	1187, 1293
MslI	CAYNNNNRTG	2 cut(s)	203, 1245
MspI	CCGG	9 cut(s)	74, 140, 211, 276, 399, 442, 612, 1099, 1280
MspR9I	CCNGG	3 cut(s)	74, 400, 1100
Mva1269I	GAATGC	1 cut(s)	1289
MwoI	GCNNNNNNNGC	9 cut(s)	172, 178, 181, 272, 381, 390, 675, 1114, 1749
NaeI	GCCGGC	1 cut(s)	212
NciI	CCSGG	3 cut(s)	74, 400, 1100
NdeII	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
NgoMIV	GCCGGC	1 cut(s)	210
NlaIV	GGNNCC	1 cut(s)	397
NmeAIII	GCCGAG	3 cut(s)	251, 360, 435
NmuCI	GTSAC	1 cut(s)	444
NsiI	ATGCAT	1 cut(s)	1177
NspI	RCATGY	1 cut(s)	1596
NspV	TTCGAA	1 cut(s)	567
PagI	TCATGA	7 cut(s)	45, 198, 250, 1207, 1240, 1246, 1609
PceI	AGGCCT	1 cut(s)	124
PciI	ACATGT	1 cut(s)	1592
PciSI	GCTCTTC	1 cut(s)	104
PctI	GAATGC	1 cut(s)	1289
PdiI	GCCGGC	1 cut(s)	212
PfeI	GAWTC	3 cut(s)	247, 639, 1303
PfoI	TCCNGGA	1 cut(s)	398
PleI	GAGTC	9 cut(s)	79, 263, 415, 444, 789, 848, 1333, 1555, 1589
PmaCI	CACGTG	1 cut(s)	242
PmlI	CACGTG	1 cut(s)	242
PpsI	GAGTC	9 cut(s)	79, 263, 415, 444, 789, 848, 1333, 1555, 1589
Ppu21I	YACGTR	1 cut(s)	242
PscI	ACATGT	1 cut(s)	1592
Psp124BI	GAGCTC	1 cut(s)	99
PspCI	CACGTG	1 cut(s)	242
PspN4I	GGNNCC	1 cut(s)	397
PspPI	GGNCC	5 cut(s)	142, 208, 396, 485, 1096
PsrI	GAACNNNNNNTAC	2 cut(s)	1612, 1644
PstI	CTGCAG	1 cut(s)	1666
PsuI	RGATCY	2 cut(s)	31, 438
RsaI	GTAC	3 cut(s)	307, 1201, 1339
RsaNI	GTAC	3 cut(s)	306, 1200, 1338
RseI	CAYNNNNRTG	2 cut(s)	203, 1245
SacI	GAGCTC	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	104
SaqAI	TTAA	2 cut(s)	1187, 1293
Sau3AI	GATC	6 cut(s)	31, 438, 510, 709, 1237, 1243
Sau96I	GGNCC	5 cut(s)	142, 208, 396, 485, 1096
ScaI	AGTACT	2 cut(s)	1201, 1339
SchI	GAGTC	9 cut(s)	79, 263, 415, 444, 790, 848, 1334, 1556, 1590
ScrFI	CCNGG	3 cut(s)	74, 400, 1100
SduI	GDGCHC	2 cut(s)	99, 1034
SfaNI	GCATC	3 cut(s)	175, 193, 1162
SfcI	CTRYAG	2 cut(s)	634, 1662
SfuI	TTCGAA	1 cut(s)	567
SinI	GGWCC	1 cut(s)	396
SmiMI	CAYNNNNRTG	2 cut(s)	203, 1245
SmlI	CTYRAG	2 cut(s)	914, 1037
SmoI	CTYRAG	2 cut(s)	914, 1037
SpeI	ACTAGT	2 cut(s)	1202, 1340
Sse9I	AATT	6 cut(s)	563, 1184, 1298, 1510, 1552, 1711
SseBI	AGGCCT	1 cut(s)	124
SspMI	CTAG	4 cut(s)	507, 675, 1203, 1341
SstI	GAGCTC	1 cut(s)	99
StuI	AGGCCT	1 cut(s)	124
StyD4I	CCNGG	3 cut(s)	72, 398, 1098
TaaI	ACNGT	1 cut(s)	319
TaiI	ACGT	2 cut(s)	244, 978
TaqI	TCGA	6 cut(s)	453, 567, 833, 849, 972, 1328
TaqII	GACCGA	1 cut(s)	249
TasI	AATT	6 cut(s)	563, 1184, 1298, 1510, 1552, 1711
TatI	WGTACW	3 cut(s)	305, 1199, 1337
TauI	GCSGC	4 cut(s)	326, 348, 490, 1391
TfiI	GAWTC	3 cut(s)	247, 639, 1303
Tru1I	TTAA	2 cut(s)	1187, 1293
Tru9I	TTAA	2 cut(s)	1187, 1293
TscAI	CASTG	3 cut(s)	346, 889, 1671
TseFI	GTSAC	1 cut(s)	444
TseI	GCWGC	8 cut(s)	40, 172, 175, 178, 181, 649, 1114, 1661
Tsp45I	GTSAC	1 cut(s)	444
TspDTI	ATGAA	9 cut(s)	62, 239, 513, 921, 935, 1224, 1428, 1616, 1626
TspGWI	ACGGA	2 cut(s)	66, 107
TspRI	CASTG	3 cut(s)	346, 889, 1671
VpaK11BI	GGWCC	1 cut(s)	396
XapI	RAATTY	2 cut(s)	563, 1552
XceI	RCATGY	1 cut(s)	1596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	895
XspI	CTAG	4 cut(s)	507, 675, 1203, 1341
ZrmI	AGTACT	2 cut(s)	1201, 1339
Zsp2I	ATGCAT	1 cut(s)	1177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.