No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33800 AT4G33800 |
| fragaria_vesca | FvH4_2g03590 FvH4_2g03590 FvH4_2g32900 FvH4_2g32900 |
| malus_domestica | MD05G1102500.v1.1 MD08G1080400.v1.1 MD10G1108100.v1.1 MD15G1067500.v1.1 |
| prunus_persica | Prupe.1G421400_v2.0.a1 Prupe.1G421400_v2.0.a1 Prupe.8G147000_v2.0.a1 |
| pyrus_communis | pycom08g06640 pycom10g09340 pycom15g06400 |
| rosa_chinensis | RchiOBHm_Chr6g0252561 RchiOBHm_Chr6g0309821 |
| rosa_laevigata | RLG00000010533 RLG00000015088 |
| rosa_multiflora | Rmu_sc0002016.1_g000030 Rmu_ssc0000373.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00159150 Rroxscaffold_7G00212580 |
| rosa_rugosa | Rorug05G0536900 Rorug06G0375000 Rorug06G0375100 |
| rosa_samantha | Rh6AG053300 Rh6AG488400 Rh6BG047100 Rh6BG498000 Rh6CG045800 Rh6CG502800 Rh6DG041500 Rh6DG488900 |
| rosa_wichuraiana | Rw6G004780 Rw6G042540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 369 |
| AcuI | CTGAAG | 2 cut(s) | 248, 341 |
| AgsI | TTSAA | 6 cut(s) | 37, 112, 164, 222, 332, 385 |
| AjnI | CCWGG | 3 cut(s) | 278, 309, 343 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 223, 255 |
| AluBI | AGCT | 1 cut(s) | 210 |
| AluI | AGCT | 1 cut(s) | 210 |
| AlwI | GGATC | 1 cut(s) | 369 |
| AoxI | GGCC | 1 cut(s) | 23 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 238 |
| AspS9I | GGNCC | 2 cut(s) | 23, 313 |
| AsuHPI | GGTGA | 1 cut(s) | 280 |
| AsuNHI | GCTAGC | 1 cut(s) | 206 |
| AvaII | GGWCC | 1 cut(s) | 313 |
| BccI | CCATC | 2 cut(s) | 97, 193 |
| BciT130I | CCWGG | 3 cut(s) | 280, 311, 345 |
| BfaI | CTAG | 2 cut(s) | 194, 207 |
| BglII | AGATCT | 1 cut(s) | 299 |
| Bme1390I | CCNGG | 3 cut(s) | 280, 311, 345 |
| Bme18I | GGWCC | 1 cut(s) | 313 |
| BmgT120I | GGNCC | 2 cut(s) | 23, 313 |
| BmrFI | CCNGG | 3 cut(s) | 280, 311, 345 |
| BmtI | GCTAGC | 1 cut(s) | 210 |
| Bse1I | ACTGG | 1 cut(s) | 370 |
| BseBI | CCWGG | 3 cut(s) | 280, 311, 345 |
| BseGI | GGATG | 1 cut(s) | 89 |
| BseNI | ACTGG | 1 cut(s) | 370 |
| BseRI | GAGGAG | 1 cut(s) | 18 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp143I | GATC | 4 cut(s) | 135, 166, 299, 361 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspOI | GCTAGC | 1 cut(s) | 210 |
| BspPI | GGATC | 1 cut(s) | 369 |
| BsrI | ACTGG | 1 cut(s) | 370 |
| BssMI | GATC | 4 cut(s) | 135, 166, 299, 361 |
| Bst2UI | CCWGG | 3 cut(s) | 280, 311, 345 |
| Bst4CI | ACNGT | 1 cut(s) | 274 |
| BstC8I | GCNNGC | 1 cut(s) | 208 |
| BstF5I | GGATG | 1 cut(s) | 89 |
| BstKTI | GATC | 4 cut(s) | 138, 169, 302, 364 |
| BstMBI | GATC | 4 cut(s) | 135, 166, 299, 361 |
| BstNI | CCWGG | 3 cut(s) | 280, 311, 345 |
| BstSCI | CCNGG | 3 cut(s) | 278, 309, 343 |
| BstX2I | RGATCY | 1 cut(s) | 299 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 377 |
| BstYI | RGATCY | 1 cut(s) | 299 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BtsCI | GGATG | 1 cut(s) | 89 |
| BtsI | GCAGTG | 1 cut(s) | 201 |
| BtsIMutI | CAGTG | 2 cut(s) | 201, 279 |
| Cac8I | GCNNGC | 1 cut(s) | 208 |
| Cfr13I | GGNCC | 2 cut(s) | 23, 313 |
| CviAII | CATG | 1 cut(s) | 243 |
| CviJI | RGCY | 3 cut(s) | 25, 210, 262 |
| CviKI_1 | RGCY | 3 cut(s) | 25, 210, 262 |
| DpnI | GATC | 4 cut(s) | 137, 168, 301, 363 |
| DpnII | GATC | 4 cut(s) | 135, 166, 299, 361 |
| Eco47I | GGWCC | 1 cut(s) | 313 |
| Eco57I | CTGAAG | 2 cut(s) | 248, 341 |
| EcoRII | CCWGG | 3 cut(s) | 278, 309, 343 |
| FaeI | CATG | 1 cut(s) | 246 |
| FaiI | YATR | 4 cut(s) | 244, 307, 321, 397 |
| FatI | CATG | 1 cut(s) | 242 |
| FokI | GGATG | 1 cut(s) | 76 |
| FspBI | CTAG | 2 cut(s) | 194, 207 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| Hin1II | CATG | 1 cut(s) | 246 |
| HphI | GGTGA | 1 cut(s) | 280 |
| Hpy166II | GTNNAC | 1 cut(s) | 52 |
| Hpy188I | TCNGA | 1 cut(s) | 10 |
| Hpy188III | TCNNGA | 3 cut(s) | 164, 194, 359 |
| Hpy8I | GTNNAC | 1 cut(s) | 52 |
| HpyAV | CCTTC | 1 cut(s) | 379 |
| HpyCH4III | ACNGT | 1 cut(s) | 274 |
| HpyCH4V | TGCA | 1 cut(s) | 305 |
| Hsp92II | CATG | 1 cut(s) | 246 |
| Kzo9I | GATC | 4 cut(s) | 135, 166, 299, 361 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| MaeI | CTAG | 2 cut(s) | 194, 207 |
| MaeIII | GTNAC | 1 cut(s) | 268 |
| MalI | GATC | 4 cut(s) | 137, 168, 301, 363 |
| MboI | GATC | 4 cut(s) | 135, 166, 299, 361 |
| MboII | GAAGA | 3 cut(s) | 9, 53, 145 |
| MflI | RGATCY | 1 cut(s) | 299 |
| MluCI | AATT | 1 cut(s) | 237 |
| MnlI | CCTC | 5 cut(s) | 36, 39, 40, 96, 113 |
| MroXI | GAANNNNTTC | 1 cut(s) | 238 |
| MslI | CAYNNNNRTG | 1 cut(s) | 36 |
| MspR9I | CCNGG | 3 cut(s) | 280, 311, 345 |
| MvaI | CCWGG | 3 cut(s) | 280, 311, 345 |
| NdeII | GATC | 4 cut(s) | 135, 166, 299, 361 |
| NheI | GCTAGC | 1 cut(s) | 206 |
| NlaIII | CATG | 1 cut(s) | 246 |
| NmuCI | GTSAC | 1 cut(s) | 268 |
| PdmI | GAANNNNTTC | 1 cut(s) | 238 |
| PflFI | GACNNNGTC | 1 cut(s) | 274 |
| PfoI | TCCNGGA | 1 cut(s) | 278 |
| Psp6I | CCWGG | 3 cut(s) | 278, 309, 343 |
| PspGI | CCWGG | 3 cut(s) | 278, 309, 343 |
| PspPI | GGNCC | 2 cut(s) | 23, 313 |
| PsuI | RGATCY | 1 cut(s) | 299 |
| PsyI | GACNNNGTC | 1 cut(s) | 274 |
| RseI | CAYNNNNRTG | 1 cut(s) | 36 |
| Sau3AI | GATC | 4 cut(s) | 135, 166, 299, 361 |
| Sau96I | GGNCC | 2 cut(s) | 23, 313 |
| ScrFI | CCNGG | 3 cut(s) | 280, 311, 345 |
| SetI | ASST | 5 cut(s) | 51, 124, 212, 270, 346 |
| SinI | GGWCC | 1 cut(s) | 313 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 36 |
| Sse9I | AATT | 1 cut(s) | 237 |
| SspMI | CTAG | 2 cut(s) | 194, 207 |
| StyD4I | CCNGG | 3 cut(s) | 278, 309, 343 |
| TaaI | ACNGT | 1 cut(s) | 274 |
| TasI | AATT | 1 cut(s) | 237 |
| TscAI | CASTG | 2 cut(s) | 208, 279 |
| TseFI | GTSAC | 1 cut(s) | 268 |
| Tsp45I | GTSAC | 1 cut(s) | 268 |
| TspDTI | ATGAA | 3 cut(s) | 54, 75, 231 |
| TspRI | CASTG | 2 cut(s) | 208, 279 |
| Tth111I | GACNNNGTC | 1 cut(s) | 274 |
| VpaK11BI | GGWCC | 1 cut(s) | 313 |
| XbaI | TCTAGA | 1 cut(s) | 193 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 317 |
| XmnI | GAANNNNTTC | 1 cut(s) | 238 |
| XspI | CTAG | 2 cut(s) | 194, 207 |