Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003719

Physical Location & Seq

Genomic Coordinates Forward (+)

46508344 .. 46510836

Gene Structure 2493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0346800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGGGAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGCCCTCAACCCTGAATCCAAGGAAAAGAAAGATCAGAAATCCAAGTCAAAGAAAAAATGGTTTGGGAAAAACAAGAATGTGGATGAGGATTATGAGGAAAATGTAGACCATTTGGAAAATGCAGACCACTTGAAAAATGCAGATCATGTGGAAAACGTAGACCATGTGGATCATGTGGTATCTTCCAAGGAAGAATCTGCATTTGTGATTCCCACTTCTTTTGCGCCACCTCCTCCTCCACCACCTCTTCCTACTCTTCCTCCAATAAAAGAGAAGTTAGAGGAGGGTGAGGATTCACAGAGAACCTCTCTTGCTCTAAAGGAAGATGTCGAATTACTGGAGGCAGAGGATGCTCAGAGCAAGCATGTTTACTCTGTGGCGGTCGCCACAGCAATGGCTGCAGAGGCGGCTGTTGCTGCTGCTCGGGCTGCCGCAGAGGTTGTACGTCTCACTGGGCTGACTCATTTCCCGGGGAAATCTTTGGAGGAGGTAGCAGTCATCAAGATTCAGACGGCATTCCGAGGGCACTTGGCAAGGAGGGCATTACGGGCTTTGAGAGGGTTGGTGAGGTTGAAATCATTGGTAGAGGGTCAATCTGTTAAACGCCAGGCGACTACCACATTAAAATGCATGCAGACCGTTGCTCGTGTACAATCTGAGATTCGTGCAAGGAGGATTAGAATGTCTGAGGAGAATCAGGCGCTTCAGCGACAGATTCAACAGAAACAAGAGAAAGAGTTGAAAGAGATGGAGAAACACAGAGTTGCTTCTATTGGAGACAACTGGAACCATAGCCCCCAATCTAAGGAGGAGGTTGAGGCAAAGCTACAGAGCAGACAAGAGGCTGCTAAGAGAAGAGAAAAGGCCTTGGCTTATTCATTCTCTCATCAGAGAATGTGGAAGAACTCTTCGAAATCTCAACATCCTACGTTCATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGAGATGGATGGCTGCAAGACCATGGGAGAGCCAAAGCACATCAGACTACAATGACCGGGCCTCCTTGAGGAGTGCAGCAAGCCGTGCATCAATGTCAGTTGCGGAAATCACCAAAGCTTATGCTCTTCGTGATGTCCACCGCGATAACAAGCCTCCTTCCCCAACTGGCCAAAAATCAAGCCGGCCTCCTAGTCGCCAATCCCCTTCAGCTCTTACCAAGACACCATCTTCATCATGGAGAACCCCAAAAAAGAATGGCTCAGGCGGGGACGAGGACTCCAGAAGTACTTACAGTGTGCAGTCGGAGCGATTCAACAGGAGGCATAGCATTGCAGGGTCCTCAGTAAGAGATGATGAGAGCCTTGCAAGCACGCCTTCAGTTCCTTCTTCAAAAAGATACCTGACACCCACAAGCTCAAAGAAGACAAGGTCACGACTGGCAAGCCCGAGCTCATCGGGGTTAGAAAAGAACAGGACACCAACACCAGACAAGGGATCATCACCATCAGTCAGTTCTGTGAAGAAGCGGCTGTCTTACCCTGCTTCCCCTGCTGGACAAAGGAGGCACTCGGGTCCTCCTAGGGTTGGCGGTAGCTCCCCTAAGGGTGCAGCTCACACAGAGAAGAAAGTTAGCAATGGTTGGGGAAGCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006950 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0016043 GO:0022607 GO:0043933 GO:0044085 GO:0050896 GO:0051259 GO:0065003 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

HSP20

Protein Analysis

555

Amino Acids

61.57

Weight (kDa)

10.0

Isoelectric Point (pI)

64.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53540 AT3G46230 AT5G59720
fragaria_vesca	FvH4_7g23710 FvH4_7g23710 FvH4_7g23710 FvH4_7g23710
malus_domestica	MD01G1144400.v1.1 MD07G1210400.v1.1 MD07G1210700.v1.1
prunus_persica	Prupe.2G243800_v2.0.a1
pyrus_communis	pycom01g16380 pycom07g19420
rosa_chinensis	RchiOBHm_Chr1g0368991 RchiOBHm_Chr4g0447191
rosa_laevigata	RLG00000027166
rosa_multiflora	Rmu_co8089732.1_g000001 Rmu_sc0004199.1_g000023
rosa_roxburghii	Rroxscaffold_4G00288100
rosa_rugosa	Rorug01G0346800 Rorug07G0282400
rosa_samantha	Rh1AG353700 Rh1BG317200 Rh1DG348100 Rh2AG301700 Rh2DG325800 Rh4AG440100 Rh4BG218600 Rh4DG210300 Rh4DG447600 Rh6BG181000 Rh6BG387100 Rh7DG008800
rosa_wichuraiana	Rw1G031250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	144, 198
AccII	CGCG	1 cut(s)	1155
AciI	CCGC	8 cut(s)	419, 446, 471, 1115, 1153, 1278, 1540, 1602
AclWI	GGATC	4 cut(s)	216, 971, 984, 1516
AcoI	YGGCCR	1 cut(s)	1180
AcuI	CTGAAG	3 cut(s)	728, 1203, 1374
AfaI	GTAC	3 cut(s)	483, 690, 1300
AfiI	CCNNNNNNNGG	5 cut(s)	844, 995, 1080, 1505, 1598
AgsI	TTSAA	6 cut(s)	172, 613, 758, 781, 1327, 1404
AjnI	CCWGG	1 cut(s)	645
AluBI	AGCT	7 cut(s)	865, 1130, 1223, 1428, 1464, 1608, 1625
AluI	AGCT	7 cut(s)	865, 1130, 1223, 1428, 1464, 1608, 1625
Alw21I	GWGCWC	1 cut(s)	1466
Alw26I	GTCTC	2 cut(s)	491, 810
AlwI	GGATC	4 cut(s)	216, 971, 984, 1516
Ama87I	CYCGRG	4 cut(s)	462, 508, 1459, 1582
AoxI	GGCC	4 cut(s)	903, 1071, 1180, 1196
ApeKI	GCWGC	8 cut(s)	437, 455, 458, 467, 884, 1025, 1088, 1622
AspA2I	CCTAGG	1 cut(s)	1592
AspLEI	GCGC	2 cut(s)	265, 742
AspS9I	GGNCC	3 cut(s)	1071, 1350, 1586
AsuC2I	CCSGG	3 cut(s)	509, 510, 1070
AsuHPI	GGTGA	4 cut(s)	338, 616, 1114, 1506
AsuII	TTCGAA	1 cut(s)	950
AvaI	CYCGRG	4 cut(s)	462, 508, 1459, 1582
AvaII	GGWCC	2 cut(s)	1350, 1586
AvrII	CCTAGG	1 cut(s)	1592
AxyI	CCTNAGG	1 cut(s)	1614
BaeGI	GKGCMC	1 cut(s)	567
BalI	TGGCCA	1 cut(s)	1182
BamHI	GGATCC	1 cut(s)	976
BanII	GRGCYC	1 cut(s)	1466
BauI	CACGAG	1 cut(s)	684
BbsI	GAAGAC	1 cut(s)	1442
Bbv12I	GWGCWC	1 cut(s)	1466
BbvI	GCAGC	8 cut(s)	424, 442, 445, 454, 871, 1012, 1100, 1634
BccI	CCATC	5 cut(s)	781, 1011, 1015, 1246, 1525
BceAI	ACGGC	2 cut(s)	567, 1080
BciT130I	CCWGG	1 cut(s)	647
BcnI	CCSGG	3 cut(s)	509, 510, 1070
BcoDI	GTCTC	2 cut(s)	491, 810
BfaI	CTAG	2 cut(s)	1203, 1593
BfmI	CTRYAG	3 cut(s)	27, 438, 866
BfoI	RGCGCY	1 cut(s)	743
BlnI	CCTAGG	1 cut(s)	1592
BmcAI	AGTACT	1 cut(s)	1300
Bme1390I	CCNGG	4 cut(s)	509, 510, 647, 1070
Bme18I	GGWCC	2 cut(s)	1350, 1586
BmeT110I	CYCGRG	4 cut(s)	462, 508, 1459, 1582
BmgT120I	GGNCC	3 cut(s)	1071, 1350, 1586
BmiI	GGNNCC	4 cut(s)	827, 978, 1351, 1587
BmrFI	CCNGG	4 cut(s)	509, 510, 647, 1070
BmrI	ACTGGG	2 cut(s)	501, 1003
BmsI	GCATC	2 cut(s)	379, 1109
BmuI	ACTGGG	2 cut(s)	501, 1003
BpiI	GAAGAC	1 cut(s)	1442
BplI	GAGNNNNNCTC	2 cut(s)	331, 363
BpmI	CTGGAG	2 cut(s)	398, 1276
Bpu10I	CCTNAGC	1 cut(s)	1273
Bpu14I	TTCGAA	1 cut(s)	950
BpuEI	CTTGAG	1 cut(s)	1099
BpuMI	CCSGG	3 cut(s)	509, 510, 1070
BsaJI	CCNNGG	8 cut(s)	57, 225, 508, 509, 559, 906, 1034, 1592
BsaXI	ACNNNNNCTCC	6 cut(s)	283, 313, 1058, 1088, 1274, 1304
Bsc4I	CCNNNNNNNGG	5 cut(s)	844, 995, 1080, 1505, 1598
Bse118I	RCCGGY	1 cut(s)	1194
Bse1I	ACTGG	6 cut(s)	381, 496, 827, 998, 1183, 1455
Bse21I	CCTNAGG	1 cut(s)	1614
Bse3DI	GCAATG	3 cut(s)	438, 1341, 1654
BseBI	CCWGG	1 cut(s)	647
BseDI	CCNNGG	8 cut(s)	57, 225, 508, 509, 559, 906, 1034, 1592
BseGI	GGATG	4 cut(s)	127, 394, 961, 1026
BseLI	CCNNNNNNNGG	5 cut(s)	844, 995, 1080, 1505, 1598
BseMI	GCAATG	3 cut(s)	438, 1341, 1654
BseMII	CTCAG	5 cut(s)	407, 687, 717, 1287, 1368
BseNI	ACTGG	6 cut(s)	381, 496, 827, 998, 1183, 1455
BseRI	GAGGAG	7 cut(s)	261, 264, 335, 539, 743, 863, 1096
BseSI	GKGCMC	1 cut(s)	567
BseXI	GCAGC	8 cut(s)	424, 442, 445, 454, 871, 1012, 1100, 1634
BseYI	CCCAGC	1 cut(s)	980
BsgI	GTGCAG	3 cut(s)	1107, 1331, 1641
Bsh1236I	CGCG	1 cut(s)	1155
Bsh1285I	CGRYCG	1 cut(s)	423
BshFI	GGCC	4 cut(s)	905, 1073, 1182, 1198
BsiEI	CGRYCG	1 cut(s)	423
BsiHKAI	GWGCWC	1 cut(s)	1466
BsiHKCI	CYCGRG	4 cut(s)	462, 508, 1459, 1582
BsiSI	CCGG	3 cut(s)	509, 1069, 1195
BslFI	GGGAC	1 cut(s)	1295
BslI	CCNNNNNNNGG	5 cut(s)	844, 995, 1080, 1505, 1598
BsmAI	GTCTC	2 cut(s)	491, 810
BsmBI	CGTCTC	1 cut(s)	491
BsmFI	GGGAC	1 cut(s)	1295
BsmI	GAATGC	1 cut(s)	554
BsnI	GGCC	4 cut(s)	905, 1073, 1182, 1198
BsoBI	CYCGRG	4 cut(s)	462, 508, 1459, 1582
Bsp119I	TTCGAA	1 cut(s)	950
Bsp1286I	GDGCHC	2 cut(s)	567, 1466
Bsp1407I	TGTACA	1 cut(s)	688
Bsp143I	GATC	5 cut(s)	70, 181, 208, 976, 1508
Bsp19I	CCATGG	1 cut(s)	1034
BspACI	CCGC	8 cut(s)	419, 446, 471, 1115, 1153, 1278, 1540, 1602
BspANI	GGCC	4 cut(s)	905, 1073, 1182, 1198
BspCNI	CTCAG	5 cut(s)	406, 688, 718, 1286, 1367
BspFNI	CGCG	1 cut(s)	1155
BspLI	GGNNCC	4 cut(s)	827, 978, 1351, 1587
BspMAI	CTGCAG	2 cut(s)	31, 442
BspPI	GGATC	4 cut(s)	216, 971, 984, 1516
BspQI	GCTCTTC	1 cut(s)	1143
BspT104I	TTCGAA	1 cut(s)	950
BsrDI	GCAATG	3 cut(s)	438, 1341, 1654
BsrFI	RCCGGY	1 cut(s)	1194
BsrGI	TGTACA	1 cut(s)	688
BsrI	ACTGG	6 cut(s)	381, 496, 827, 998, 1183, 1455
BssAI	RCCGGY	1 cut(s)	1194
BssECI	CCNNGG	8 cut(s)	57, 225, 508, 509, 559, 906, 1034, 1592
BssMI	GATC	5 cut(s)	70, 181, 208, 976, 1508
BssSI	CACGAG	1 cut(s)	684
BssT1I	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
Bst2BI	CACGAG	1 cut(s)	684
Bst2UI	CCWGG	1 cut(s)	647
Bst4CI	ACNGT	2 cut(s)	679, 1307
Bst6I	CTCTTC	5 cut(s)	291, 300, 889, 952, 1143
BstAPI	GCANNNNNTGC	3 cut(s)	389, 437, 1097
BstAUI	TGTACA	1 cut(s)	688
BstBI	TTCGAA	1 cut(s)	950
BstC8I	GCNNGC	7 cut(s)	401, 671, 1093, 1196, 1381, 1385, 1456
BstDEI	CTNAG	8 cut(s)	393, 696, 726, 843, 888, 1273, 1354, 1614
BstDSI	CCRYGG	1 cut(s)	1034
BstENI	CCTNNNNNAGG	1 cut(s)	1078
BstF5I	GGATG	4 cut(s)	127, 394, 961, 1026
BstFNI	CGCG	1 cut(s)	1155
BstH2I	RGCGCY	1 cut(s)	743
BstHHI	GCGC	2 cut(s)	265, 742
BstKTI	GATC	5 cut(s)	73, 184, 211, 979, 1511
BstMAI	GTCTC	2 cut(s)	491, 810
BstMBI	GATC	5 cut(s)	70, 181, 208, 976, 1508
BstMCI	CGRYCG	1 cut(s)	423
BstNI	CCWGG	1 cut(s)	647
BstNSI	RCATGY	2 cut(s)	407, 673
BstSCI	CCNGG	4 cut(s)	507, 508, 645, 1068
BstSFI	CTRYAG	3 cut(s)	27, 438, 866
BstSLI	GKGCMC	1 cut(s)	567
BstUI	CGCG	1 cut(s)	1155
BstV1I	GCAGC	8 cut(s)	424, 442, 445, 454, 871, 1012, 1100, 1634
BstV2I	GAAGAC	1 cut(s)	1442
BstX2I	RGATCY	1 cut(s)	976
BstXI	CCANNNNNNTGG	1 cut(s)	433
BstYI	RGATCY	1 cut(s)	976
Bsu36I	CCTNAGG	1 cut(s)	1614
BsuRI	GGCC	4 cut(s)	905, 1073, 1182, 1198
BtgI	CCRYGG	1 cut(s)	1034
BtsCI	GGATG	4 cut(s)	127, 394, 961, 1026
BtsI	GCAGTG	1 cut(s)	36
BtsIMutI	CAGTG	4 cut(s)	36, 489, 991, 1312
Cac8I	GCNNGC	7 cut(s)	401, 671, 1093, 1196, 1381, 1385, 1456
CfoI	GCGC	2 cut(s)	265, 742
Cfr10I	RCCGGY	1 cut(s)	1194
Cfr13I	GGNCC	3 cut(s)	1071, 1350, 1586
Cfr9I	CCCGGG	1 cut(s)	508
Csp6I	GTAC	3 cut(s)	482, 689, 1299
CspCI	CAANNNNNGTGG	4 cut(s)	241, 276, 980, 1015
CviAII	CATG	8 cut(s)	185, 203, 212, 404, 670, 973, 1035, 1248
CviQI	GTAC	3 cut(s)	482, 689, 1299
DdeI	CTNAG	8 cut(s)	393, 696, 726, 843, 888, 1273, 1354, 1614
DpnI	GATC	5 cut(s)	72, 183, 210, 978, 1510
DpnII	GATC	5 cut(s)	70, 181, 208, 976, 1508
EaeI	YGGCCR	1 cut(s)	1180
Eam1104I	CTCTTC	5 cut(s)	291, 300, 889, 952, 1143
EarI	CTCTTC	5 cut(s)	291, 300, 889, 952, 1143
Ecl136II	GAGCTC	1 cut(s)	1464
Eco130I	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
Eco147I	AGGCCT	1 cut(s)	905
Eco24I	GRGCYC	1 cut(s)	1466
Eco47I	GGWCC	2 cut(s)	1350, 1586
Eco53kI	GAGCTC	1 cut(s)	1464
Eco57I	CTGAAG	3 cut(s)	728, 1203, 1374
Eco81I	CCTNAGG	1 cut(s)	1614
Eco88I	CYCGRG	4 cut(s)	462, 508, 1459, 1582
EcoICRI	GAGCTC	1 cut(s)	1464
EcoNI	CCTNNNNNAGG	1 cut(s)	1078
EcoO109I	RGGNCCY	2 cut(s)	1350, 1586
EcoRII	CCWGG	1 cut(s)	645
EcoT14I	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
EcoT22I	ATGCAT	1 cut(s)	671
EcoT38I	GRGCYC	1 cut(s)	1466
ErhI	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
Esp3I	CGTCTC	1 cut(s)	491
FaeI	CATG	8 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251
FalI	AAGNNNNNCTT	2 cut(s)	1372, 1404
FaqI	GGGAC	1 cut(s)	1295
FatI	CATG	8 cut(s)	184, 202, 211, 403, 669, 972, 1034, 1247
FauI	CCCGC	1 cut(s)	1271
FblI	GTMKAC	2 cut(s)	144, 198
FokI	GGATG	4 cut(s)	134, 401, 948, 1033
FriOI	GRGCYC	1 cut(s)	1466
FspBI	CTAG	2 cut(s)	1203, 1593
GlaI	GCGC	2 cut(s)	264, 741
GsaI	CCCAGC	1 cut(s)	984
GsuI	CTGGAG	2 cut(s)	398, 1276
HaeII	RGCGCY	1 cut(s)	743
HaeIII	GGCC	4 cut(s)	905, 1073, 1182, 1198
HapII	CCGG	3 cut(s)	509, 1069, 1195
HhaI	GCGC	2 cut(s)	265, 742
Hin1II	CATG	8 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251
Hin6I	GCGC	2 cut(s)	263, 740
HinP1I	GCGC	2 cut(s)	263, 740
HindIII	AAGCTT	1 cut(s)	1128
HpaII	CCGG	3 cut(s)	509, 1069, 1195
HphI	GGTGA	4 cut(s)	338, 616, 1114, 1506
Hpy166II	GTNNAC	5 cut(s)	145, 199, 409, 689, 1150
Hpy188I	TCNGA	9 cut(s)	75, 396, 549, 560, 697, 727, 930, 1057, 1318
Hpy188III	TCNNGA	4 cut(s)	541, 1142, 1293, 1446
Hpy8I	GTNNAC	5 cut(s)	145, 199, 409, 689, 1150
HpyAV	CCTTC	4 cut(s)	1179, 1227, 1398, 1407
HpyCH4III	ACNGT	2 cut(s)	679, 1307
HpyCH4IV	ACGT	3 cut(s)	195, 484, 968
HpyF3I	CTNAG	8 cut(s)	393, 696, 726, 843, 888, 1273, 1354, 1614
HpySE526I	ACGT	3 cut(s)	195, 484, 968
Hsp92II	CATG	8 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251
HspAI	GCGC	2 cut(s)	263, 740
KroI	GCCGGC	1 cut(s)	1194
KroNI	GCCGGC	1 cut(s)	1196
Kzo9I	GATC	5 cut(s)	70, 181, 208, 976, 1508
LguI	GCTCTTC	1 cut(s)	1143
LmnI	GCTCC	2 cut(s)	1318, 1613
Lsp1109I	GCAGC	8 cut(s)	424, 442, 445, 454, 871, 1012, 1100, 1634
LweI	GCATC	2 cut(s)	379, 1109
MaeI	CTAG	2 cut(s)	1203, 1593
MaeII	ACGT	3 cut(s)	195, 484, 968
MaeIII	GTNAC	1 cut(s)	1443
MalI	GATC	5 cut(s)	72, 183, 210, 978, 1510
MboI	GATC	5 cut(s)	70, 181, 208, 976, 1508
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	2 cut(s)	567, 1466
MlsI	TGGCCA	1 cut(s)	1182
MluCI	AATT	1 cut(s)	371
MluNI	TGGCCA	1 cut(s)	1182
MlyI	GAGTC	2 cut(s)	493, 1283
MmeI	TCCRAC	2 cut(s)	980, 1296
Mox20I	TGGCCA	1 cut(s)	1182
Mph1103I	ATGCAT	1 cut(s)	671
MroNI	GCCGGC	1 cut(s)	1194
MscI	TGGCCA	1 cut(s)	1182
MseI	TTAA	2 cut(s)	639, 662
MslI	CAYNNNNRTG	2 cut(s)	431, 664
Msp20I	TGGCCA	1 cut(s)	1182
MspI	CCGG	3 cut(s)	509, 1069, 1195
MspR9I	CCNGG	4 cut(s)	509, 510, 647, 1070
Mva1269I	GAATGC	1 cut(s)	554
MvaI	CCWGG	1 cut(s)	647
MvnI	CGCG	1 cut(s)	1155
NaeI	GCCGGC	1 cut(s)	1196
NciI	CCSGG	3 cut(s)	509, 510, 1070
NcoI	CCATGG	1 cut(s)	1034
NdeII	GATC	5 cut(s)	70, 181, 208, 976, 1508
NgoMIV	GCCGGC	1 cut(s)	1194
NlaIII	CATG	8 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251
NlaIV	GGNNCC	4 cut(s)	827, 978, 1351, 1587
NmuCI	GTSAC	1 cut(s)	1443
NsiI	ATGCAT	1 cut(s)	671
NspI	RCATGY	2 cut(s)	407, 673
NspV	TTCGAA	1 cut(s)	950
PaeI	GCATGC	1 cut(s)	673
PceI	AGGCCT	1 cut(s)	905
PciSI	GCTCTTC	1 cut(s)	1143
PctI	GAATGC	1 cut(s)	554
PdiI	GCCGGC	1 cut(s)	1196
PfeI	GAWTC	9 cut(s)	53, 233, 247, 332, 544, 700, 733, 754, 1323
PflFI	GACNNNGTC	1 cut(s)	1441
PleI	GAGTC	2 cut(s)	493, 1283
PpsI	GAGTC	2 cut(s)	493, 1283
PpuMI	RGGWCCY	2 cut(s)	1350, 1586
Psp124BI	GAGCTC	1 cut(s)	1466
Psp5II	RGGWCCY	2 cut(s)	1350, 1586
Psp6I	CCWGG	1 cut(s)	645
PspFI	CCCAGC	1 cut(s)	980
PspGI	CCWGG	1 cut(s)	645
PspN4I	GGNNCC	4 cut(s)	827, 978, 1351, 1587
PspPI	GGNCC	3 cut(s)	1071, 1350, 1586
PspPPI	RGGWCCY	2 cut(s)	1350, 1586
PstI	CTGCAG	2 cut(s)	31, 442
PsuI	RGATCY	1 cut(s)	976
PsyI	GACNNNGTC	1 cut(s)	1441
RsaI	GTAC	3 cut(s)	483, 690, 1300
RsaNI	GTAC	3 cut(s)	482, 689, 1299
RseI	CAYNNNNRTG	2 cut(s)	431, 664
SacI	GAGCTC	1 cut(s)	1466
SapI	GCTCTTC	1 cut(s)	1143
SaqAI	TTAA	2 cut(s)	639, 662
Sau3AI	GATC	5 cut(s)	70, 181, 208, 976, 1508
Sau96I	GGNCC	3 cut(s)	1071, 1350, 1586
ScaI	AGTACT	1 cut(s)	1300
SchI	GAGTC	2 cut(s)	493, 1283
ScrFI	CCNGG	4 cut(s)	509, 510, 647, 1070
SduI	GDGCHC	2 cut(s)	567, 1466
SfaNI	GCATC	2 cut(s)	379, 1109
SfcI	CTRYAG	3 cut(s)	27, 438, 866
SfuI	TTCGAA	1 cut(s)	950
SinI	GGWCC	2 cut(s)	1350, 1586
SmaI	CCCGGG	1 cut(s)	510
SmiMI	CAYNNNNRTG	2 cut(s)	431, 664
SmlI	CTYRAG	1 cut(s)	1078
SmoI	CTYRAG	1 cut(s)	1078
SphI	GCATGC	1 cut(s)	673
Sse9I	AATT	1 cut(s)	371
SseBI	AGGCCT	1 cut(s)	905
SsiI	CCGC	8 cut(s)	419, 446, 471, 1115, 1153, 1278, 1540, 1602
SspMI	CTAG	2 cut(s)	1203, 1593
SstI	GAGCTC	1 cut(s)	1466
StuI	AGGCCT	1 cut(s)	905
StyD4I	CCNGG	4 cut(s)	507, 508, 645, 1068
StyI	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
TaaI	ACNGT	2 cut(s)	679, 1307
TaiI	ACGT	3 cut(s)	198, 487, 971
TaqI	TCGA	2 cut(s)	369, 950
TasI	AATT	1 cut(s)	371
TatI	WGTACW	2 cut(s)	688, 1298
TauI	GCSGC	3 cut(s)	449, 473, 1543
TfiI	GAWTC	9 cut(s)	53, 233, 247, 332, 544, 700, 733, 754, 1323
Tru1I	TTAA	2 cut(s)	639, 662
Tru9I	TTAA	2 cut(s)	639, 662
TscAI	CASTG	4 cut(s)	36, 496, 998, 1312
TseFI	GTSAC	1 cut(s)	1443
TseI	GCWGC	8 cut(s)	437, 455, 458, 467, 884, 1025, 1088, 1622
Tsp45I	GTSAC	1 cut(s)	1443
TspDTI	ATGAA	3 cut(s)	906, 961, 1233
TspMI	CCCGGG	1 cut(s)	508
TspRI	CASTG	4 cut(s)	36, 496, 998, 1312
Tth111I	GACNNNGTC	1 cut(s)	1441
VpaK11BI	GGWCC	2 cut(s)	1350, 1586
XagI	CCTNNNNNAGG	1 cut(s)	1078
XceI	RCATGY	2 cut(s)	407, 673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1245
XmaI	CCCGGG	1 cut(s)	508
XmaJI	CCTAGG	1 cut(s)	1592
XmiI	GTMKAC	2 cut(s)	144, 198
XspI	CTAG	2 cut(s)	1203, 1593
ZrmI	AGTACT	1 cut(s)	1300
Zsp2I	ATGCAT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.