Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002871

Physical Location & Seq

Genomic Coordinates Forward (+)

244072 .. 246000

Gene Structure 1929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0002300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAACCGATCGTCGTCGTCAAAGGCGGCGAAGAAGCCCTCTCCGGCGCCGGCGAATAAGAATAAGAAGAAGAACAACAACAAAAAAGAGCAGAGCCCTCGAAACCCGTTGCAGGATCTCAATGTCATTAGCACCACCACTAGCAACCATGGGAGCGAAGCTTCTTCTTCTTCAATGTCCATCGAAGCCCCACGAGGTTGCCTCAGGTTCTTTCTCTCTCACTCCTCTTCCTCTAATTTAAAAACCCCTATACGCACACGCACACGCACACGCACACGCACCAGGCCTAAAACTCTCTCCAAAACCCCTAAATCAGCTCCTCTTGTGAGGCACCCCTCCAATTCCAAATGCAATGTTTCCAAACACAACCCGCAGAAATCAAAATTCAAGACTAGCTCTTCTTGCTTGTATCACTGGCAGCCTGGGAACCTACCTAGTTGTAGGAATGGGCTCAAGTTGAAAGCTTGTCCAGCTTTCAATTCCTTTGAACAAGGTGCTGTCAGGGTAGGTCAACCCACAGGTTCTAGTGATGCAACTTTTACTCCCTTGTGTAAGATACCTACCGGGTTGGGTTTGGACCGCAAAGTCGATAACACTGAGGAGGAGGATGTGCAACAGAATTCTAACAAGAGTAATAGTACAACTCCTCCTGTTCAGGCCTCTGTGTCTCCAGAGATACAAGTTGGATCGTCTGCCGTGTCATCAGCCTCGCTGGCTTGTTATGCTGCAGGCCATGTTCTTTCGGGGATCGCTGACAAGAGGAAGTGCAGACCTAGGGGAATTCTCAATGTAGGAGAGAATGATTCTGGCTTTGGGAAAGGGAAGGCTTCATGCAGTTTTGAGCAAGTGGTGGAGGATGACGATGCAACTGGCAAAGGAATGGTTGGAGATCCTGATGCTTCTATGCTTCCCTTACCTACTGAAGCTTCAATGCATTGGATTTTATCACCATGTAATGAGGAAGATGAGGATCACAAGGAGCATTCTGAATCTAGTTTTCAGAATCCTGCAGGGTCCCCCAATAGTGGTCGTCGTGAATTCTCTTCAGATGTATGCTGCGATAACAACTATGAAAGCAGTACTTGCCGTAGCAGGAGGAATACTTCCATTTCTCCTAAGTCTCAAGAATTGTTAAATGAGCATGTGCCTGTTTTGTCTTCTCCGCGTTCTACACCTGGTTGTGAGGCTCTACCCTTGAAAGATGAAAGGCAATACATTTATGAGTTTGATGCAGAGAATTCTCCGTTTTCTCTGGCTTCACTGAGTAGTGGGAATGTTATTCTTACACCTCAATCAGACTCAAGTGCAGATAGACATGCTGGCCTCTCATGGTCTAATACAGACAACCATAGGAAACACTACGATTCTGAACTCAGTTCAGTGGCTGAAGCTATTCGGATGGCAAGCTTGTCTCCAAACCGTCATGAACTGATTGAGGATCAGATTGATTCAAGTTTCCAATTTGATTGTCTAACTACAACTTGTAATTCGATCAGTCGAATCCAGAAAATGTTGGATGATCAGGCTCCCTGGCATTCCAACTCCACTTTAGAGAATGTGTCACAATCCCAGCTGAGGATATCATGGAGAGAAGGGTTAATGAGCCGTATGCATGACATGGATGAATATGATTGCTGCAGATGTTTATCAGACGAAGAGGAAGATATCAATGGCTGCAGCAATGACCTTCCCAAAAAGTCCTGTCTAAGTCCTGAAATCACCAACAACGTTGAGGCAGATCAGATTTTAACTGATACTTCCTGGTCTGCTGATATACTGGATGATGAACCAGGAGTTGCGGGAAAAGTTAAAGAAGACTTTCATCCTCAATCATGTGCTGAGTCCATAAGCACTGATGGAGGCGGCCTGCTTGCTTCAGGGGATTCAGACTGGAATCTCTGCTACAAGAATGAGCTGTTCCATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

642

Amino Acids

70.14

Weight (kDa)

5.88

Isoelectric Point (pI)

64.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002871)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g12870 FvH4_7g12880
rosa_chinensis	RchiOBHm_Chr1g0351951 RchiOBHm_Chr2g0089651 RchiOBHm_Chr2g0123231 RchiOBHm_Chr4g0439191
rosa_laevigata	RLG00000006289 RLG00000016048 RLG00000028372
rosa_multiflora	Rmu_sc0000665.1_g000025 Rmu_sc0002236.1_g000010 Rmu_sc0007728.1_g000009
rosa_roxburghii	Rroxscaffold_2G00151690 Rroxscaffold_4G00303430 Rroxscaffold_5G00380180
rosa_rugosa	Rorug01G0223100 Rorug02G0002200 Rorug02G0002300 Rorug02G0002400 Rorug04G0316500.1 Rorug04G0316600 Rorug04G0316700 Rorug04G0316800 Rorug04G0316800 Rorug04G0316900
rosa_samantha	Rh1AG237100 Rh1BG207300 Rh1CG221500 Rh1DG234300 Rh2AG047700 Rh2BG046300 Rh2CG048300 Rh2DG047700 Rh4AG367400 Rh4BG379000 Rh4CG393400 Rh4DG373600
rosa_wichuraiana	Rw1G020620 Rw2G004280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	584
AccB1I	GGYRCC	2 cut(s)	46, 330
AccII	CGCG	1 cut(s)	1165
AciI	CCGC	6 cut(s)	26, 371, 580, 1163, 1799, 1863
AclI	AACGTT	1 cut(s)	1728
AclWI	GGATC	6 cut(s)	123, 694, 755, 884, 978, 1446
AcsI	RAATTY	5 cut(s)	383, 619, 780, 1037, 1237
AcuI	CTGAAG	4 cut(s)	942, 1029, 1407, 1860
AcyI	GRCGYC	1 cut(s)	47
AfaI	GTAC	2 cut(s)	640, 1081
AfiI	CCNNNNNNNGG	3 cut(s)	112, 1025, 1575
AgsI	TTSAA	8 cut(s)	174, 388, 460, 478, 488, 930, 1198, 1452
AjnI	CCWGG	6 cut(s)	281, 421, 1174, 1529, 1760, 1789
Alw26I	GTCTC	3 cut(s)	672, 1125, 1416
AlwI	GGATC	6 cut(s)	123, 694, 755, 884, 978, 1446
AlwNI	CAGNNNCTG	1 cut(s)	1385
AoxI	GGCC	5 cut(s)	284, 657, 730, 1321, 1864
ApeKI	GCWGC	6 cut(s)	418, 725, 1056, 1635, 1674, 1677
ApoI	RAATTY	5 cut(s)	383, 619, 780, 1037, 1237
Asp700I	GAANNNNTTC	2 cut(s)	1392, 1818
AspA2I	CCTAGG	1 cut(s)	773
AspLEI	GCGC	1 cut(s)	49
AspS9I	GGNCC	2 cut(s)	577, 1014
AsuC2I	CCSGG	1 cut(s)	565
AsuHPI	GGTGA	2 cut(s)	939, 1711
AvaII	GGWCC	2 cut(s)	577, 1014
AvrII	CCTAGG	1 cut(s)	773
AxyI	CCTNAGG	1 cut(s)	203
BanI	GGYRCC	2 cut(s)	46, 330
BanII	GRGCYC	2 cut(s)	98, 453
BauI	CACGAG	1 cut(s)	192
BbsI	GAAGAC	2 cut(s)	1149, 1821
BbvCI	CCTCAGC	1 cut(s)	1574
BbvI	GCAGC	6 cut(s)	430, 712, 1043, 1622, 1661, 1689
BccI	CCATC	3 cut(s)	188, 1393, 1850
BceAI	ACGGC	3 cut(s)	680, 1071, 1590
BcgI	CGANNNNNNTGC	2 cut(s)	80, 114
BciT130I	CCWGG	6 cut(s)	283, 423, 1176, 1531, 1762, 1791
BclI	TGATCA	1 cut(s)	1519
BcnI	CCSGG	1 cut(s)	565
BcoDI	GTCTC	3 cut(s)	672, 1125, 1416
BfaI	CTAG	6 cut(s)	141, 393, 435, 525, 774, 993
BfmI	CTRYAG	4 cut(s)	726, 1008, 1636, 1675
BfoI	RGCGCY	1 cut(s)	50
BglI	GCCNNNNNGGC	1 cut(s)	713
BisI	GCNGC	8 cut(s)	27, 419, 726, 1057, 1636, 1675, 1678, 1864
BlnI	CCTAGG	1 cut(s)	773
BlsI	GCNGC	8 cut(s)	28, 420, 727, 1058, 1637, 1676, 1679, 1865
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	7 cut(s)	283, 423, 565, 1176, 1531, 1762, 1791
Bme18I	GGWCC	2 cut(s)	577, 1014
BmgT120I	GGNCC	2 cut(s)	577, 1014
BmiI	GGNNCC	6 cut(s)	48, 332, 428, 1015, 1016, 1527
BmrFI	CCNGG	7 cut(s)	283, 423, 565, 1176, 1531, 1762, 1791
BmsI	GCATC	4 cut(s)	520, 853, 886, 1219
BpiI	GAAGAC	2 cut(s)	1149, 1821
BplI	GAGNNNNNCTC	2 cut(s)	186, 218
BpmI	CTGGAG	1 cut(s)	654
Bpu10I	CCTNAGC	1 cut(s)	1574
BpuEI	CTTGAG	3 cut(s)	437, 1107, 1285
BpuMI	CCSGG	1 cut(s)	565
BsaBI	GATNNNNATC	2 cut(s)	969, 1645
BsaHI	GRCGYC	1 cut(s)	47
BsaJI	CCNNGG	4 cut(s)	148, 422, 773, 1529
BsaXI	ACNNNNNCTCC	4 cut(s)	526, 556, 631, 661
Bsc4I	CCNNNNNNNGG	3 cut(s)	112, 1025, 1575
Bse118I	RCCGGY	1 cut(s)	49
Bse1I	ACTGG	4 cut(s)	419, 874, 1782, 1895
Bse21I	CCTNAGG	1 cut(s)	203
Bse3DI	GCAATG	2 cut(s)	358, 1687
Bse8I	GATNNNNATC	2 cut(s)	969, 1645
BseBI	CCWGG	6 cut(s)	283, 423, 1176, 1531, 1762, 1791
BseDI	CCNNGG	4 cut(s)	148, 422, 773, 1529
BseGI	GGATG	7 cut(s)	613, 862, 1404, 1522, 1627, 1786, 1822
BseJI	GATNNNNATC	2 cut(s)	969, 1645
BseLI	CCNNNNNNNGG	3 cut(s)	112, 1025, 1575
BseMI	GCAATG	2 cut(s)	358, 1687
BseMII	CTCAG	6 cut(s)	217, 588, 1253, 1387, 1565, 1830
BseNI	ACTGG	4 cut(s)	419, 874, 1782, 1895
BseRI	GAGGAG	5 cut(s)	214, 309, 614, 617, 636
BseXI	GCAGC	6 cut(s)	430, 712, 1043, 1622, 1661, 1689
BseYI	CCCAGC	1 cut(s)	1569
BsgI	GTGCAG	2 cut(s)	787, 1326
Bsh1236I	CGCG	1 cut(s)	1165
Bsh1285I	CGRYCG	1 cut(s)	11
BshFI	GGCC	5 cut(s)	286, 659, 732, 1323, 1866
BshNI	GGYRCC	2 cut(s)	46, 330
BsiEI	CGRYCG	1 cut(s)	11
BsiSI	CCGG	3 cut(s)	44, 50, 564
BslFI	GGGAC	1 cut(s)	1000
BslI	CCNNNNNNNGG	3 cut(s)	112, 1025, 1575
BsmAI	GTCTC	3 cut(s)	672, 1125, 1416
BsmFI	GGGAC	1 cut(s)	1000
BsmI	GAATGC	2 cut(s)	982, 1534
BsnI	GGCC	5 cut(s)	286, 659, 732, 1323, 1866
Bsp1286I	GDGCHC	2 cut(s)	98, 453
Bsp19I	CCATGG	1 cut(s)	148
BspACI	CCGC	6 cut(s)	26, 371, 580, 1163, 1799, 1863
BspANI	GGCC	5 cut(s)	286, 659, 732, 1323, 1866
BspCNI	CTCAG	6 cut(s)	216, 589, 1254, 1386, 1566, 1831
BspFNI	CGCG	1 cut(s)	1165
BspHI	TCATGA	1 cut(s)	1423
BspLI	GGNNCC	6 cut(s)	48, 332, 428, 1015, 1016, 1527
BspMAI	CTGCAG	4 cut(s)	730, 1012, 1640, 1679
BspPI	GGATC	6 cut(s)	123, 694, 755, 884, 978, 1446
BspQI	GCTCTTC	1 cut(s)	403
BspT107I	GGYRCC	2 cut(s)	46, 330
BsrDI	GCAATG	2 cut(s)	358, 1687
BsrFI	RCCGGY	1 cut(s)	49
BsrI	ACTGG	4 cut(s)	419, 874, 1782, 1895
BssAI	RCCGGY	1 cut(s)	49
BssECI	CCNNGG	4 cut(s)	148, 422, 773, 1529
BssNI	GRCGYC	1 cut(s)	47
BssSI	CACGAG	1 cut(s)	192
BssT1I	CCWWGG	2 cut(s)	148, 773
Bst2BI	CACGAG	1 cut(s)	192
Bst2UI	CCWGG	6 cut(s)	283, 423, 1176, 1531, 1762, 1791
Bst4CI	ACNGT	1 cut(s)	1421
Bst6I	CTCTTC	4 cut(s)	232, 403, 1048, 1650
BstACI	GRCGYC	1 cut(s)	47
BstAPI	GCANNNNNTGC	1 cut(s)	1083
BstC8I	GCNNGC	7 cut(s)	51, 714, 730, 1321, 1405, 1868, 1872
BstDEI	CTNAG	8 cut(s)	203, 597, 1116, 1262, 1373, 1574, 1706, 1839
BstDSI	CCRYGG	1 cut(s)	148
BstF5I	GGATG	7 cut(s)	613, 862, 1404, 1522, 1627, 1786, 1822
BstFNI	CGCG	1 cut(s)	1165
BstH2I	RGCGCY	1 cut(s)	50
BstHHI	GCGC	1 cut(s)	49
BstMAI	GTCTC	3 cut(s)	672, 1125, 1416
BstMCI	CGRYCG	1 cut(s)	11
BstMWI	GCNNNNNNNGC	5 cut(s)	402, 470, 713, 722, 1083
BstNI	CCWGG	6 cut(s)	283, 423, 1176, 1531, 1762, 1791
BstNSI	RCATGY	2 cut(s)	1145, 1319
BstSCI	CCNGG	7 cut(s)	281, 421, 563, 1174, 1529, 1760, 1789
BstSFI	CTRYAG	4 cut(s)	726, 1008, 1636, 1675
BstUI	CGCG	1 cut(s)	1165
BstV1I	GCAGC	6 cut(s)	430, 712, 1043, 1622, 1661, 1689
BstV2I	GAAGAC	2 cut(s)	1149, 1821
BstX2I	RGATCY	2 cut(s)	115, 889
BstYI	RGATCY	2 cut(s)	115, 889
Bsu36I	CCTNAGG	1 cut(s)	203
BsuRI	GGCC	5 cut(s)	286, 659, 732, 1323, 1866
BtgI	CCRYGG	1 cut(s)	148
BtsCI	GGATG	7 cut(s)	613, 862, 1404, 1522, 1627, 1786, 1822
BtsIMutI	CAGTG	5 cut(s)	412, 594, 1259, 1386, 1851
Cac8I	GCNNGC	7 cut(s)	51, 714, 730, 1321, 1405, 1868, 1872
CaiI	CAGNNNCTG	1 cut(s)	1385
CciI	TCATGA	1 cut(s)	1423
CfoI	GCGC	1 cut(s)	49
Cfr10I	RCCGGY	1 cut(s)	49
Cfr13I	GGNCC	2 cut(s)	577, 1014
CsiI	ACCWGGT	1 cut(s)	1174
Csp6I	GTAC	2 cut(s)	639, 1080
CviQI	GTAC	2 cut(s)	639, 1080
DdeI	CTNAG	8 cut(s)	203, 597, 1116, 1262, 1373, 1574, 1706, 1839
DinI	GGCGCC	1 cut(s)	48
DraI	TTTAAA	1 cut(s)	240
DrdI	GACNNNNNNGTC	1 cut(s)	584
DseDI	GACNNNNNNGTC	1 cut(s)	584
Eam1104I	CTCTTC	4 cut(s)	232, 403, 1048, 1650
EarI	CTCTTC	4 cut(s)	232, 403, 1048, 1650
Eco130I	CCWWGG	2 cut(s)	148, 773
Eco147I	AGGCCT	2 cut(s)	286, 659
Eco24I	GRGCYC	2 cut(s)	98, 453
Eco32I	GATATC	2 cut(s)	1581, 1666
Eco47I	GGWCC	2 cut(s)	577, 1014
Eco57I	CTGAAG	4 cut(s)	942, 1029, 1407, 1860
Eco81I	CCTNAGG	1 cut(s)	203
EcoO109I	RGGNCCY	1 cut(s)	1014
EcoRI	GAATTC	4 cut(s)	619, 780, 1037, 1237
EcoRII	CCWGG	6 cut(s)	281, 421, 1174, 1529, 1760, 1789
EcoRV	GATATC	2 cut(s)	1581, 1666
EcoT14I	CCWWGG	2 cut(s)	148, 773
EcoT22I	ATGCAT	2 cut(s)	936, 1614
EcoT38I	GRGCYC	2 cut(s)	98, 453
EgeI	GGCGCC	1 cut(s)	48
EheI	GGCGCC	1 cut(s)	48
ErhI	CCWWGG	2 cut(s)	148, 773
FalI	AAGNNNNNCTT	2 cut(s)	1066, 1098
FaqI	GGGAC	1 cut(s)	1000
FauI	CCCGC	2 cut(s)	378, 1792
FbaI	TGATCA	1 cut(s)	1519
Fnu4HI	GCNGC	8 cut(s)	27, 419, 726, 1057, 1636, 1675, 1678, 1864
FokI	GGATG	7 cut(s)	620, 869, 1411, 1529, 1634, 1793, 1809
FriOI	GRGCYC	2 cut(s)	98, 453
Fsp4HI	GCNGC	8 cut(s)	27, 419, 726, 1057, 1636, 1675, 1678, 1864
FspBI	CTAG	6 cut(s)	141, 393, 435, 525, 774, 993
GlaI	GCGC	1 cut(s)	48
GluI	GCNGC	8 cut(s)	27, 419, 726, 1057, 1636, 1675, 1678, 1864
GsaI	CCCAGC	1 cut(s)	1573
GsuI	CTGGAG	1 cut(s)	654
HaeII	RGCGCY	1 cut(s)	50
HaeIII	GGCC	5 cut(s)	286, 659, 732, 1323, 1866
HapII	CCGG	3 cut(s)	44, 50, 564
HhaI	GCGC	1 cut(s)	49
Hin1I	GRCGYC	1 cut(s)	47
Hin6I	GCGC	1 cut(s)	47
HinP1I	GCGC	1 cut(s)	47
HincII	GTYRAC	1 cut(s)	512
HindII	GTYRAC	1 cut(s)	512
HindIII	AAGCTT	4 cut(s)	159, 462, 924, 1405
HpaII	CCGG	3 cut(s)	44, 50, 564
HphI	GGTGA	2 cut(s)	939, 1711
Hpy166II	GTNNAC	1 cut(s)	512
Hpy188III	TCNNGA	8 cut(s)	388, 671, 893, 1034, 1124, 1424, 1504, 1712
Hpy8I	GTNNAC	1 cut(s)	512
Hpy99I	CGWCG	3 cut(s)	16, 19, 1035
HpyAV	CCTTC	3 cut(s)	817, 1586, 1697
HpyCH4III	ACNGT	1 cut(s)	1421
HpyCH4IV	ACGT	1 cut(s)	1728
HpyF10VI	GCNNNNNNNGC	5 cut(s)	402, 470, 713, 722, 1083
HpyF3I	CTNAG	8 cut(s)	203, 597, 1116, 1262, 1373, 1574, 1706, 1839
HpySE526I	ACGT	1 cut(s)	1728
Hsp92I	GRCGYC	1 cut(s)	47
HspAI	GCGC	1 cut(s)	47
KasI	GGCGCC	1 cut(s)	46
KflI	GGGWCCC	1 cut(s)	1014
KroI	GCCGGC	1 cut(s)	49
KroNI	GCCGGC	1 cut(s)	51
Ksp22I	TGATCA	1 cut(s)	1519
LguI	GCTCTTC	1 cut(s)	403
LmnI	GCTCC	4 cut(s)	153, 322, 979, 1531
Lsp1109I	GCAGC	6 cut(s)	430, 712, 1043, 1622, 1661, 1689
LweI	GCATC	4 cut(s)	520, 853, 886, 1219
MabI	ACCWGGT	1 cut(s)	1174
MaeI	CTAG	6 cut(s)	141, 393, 435, 525, 774, 993
MaeII	ACGT	1 cut(s)	1728
MaeIII	GTNAC	1 cut(s)	1560
MflI	RGATCY	2 cut(s)	115, 889
MhlI	GDGCHC	2 cut(s)	98, 453
Mly113I	GGCGCC	1 cut(s)	47
MlyI	GAGTC	2 cut(s)	1292, 1850
MmeI	TCCRAC	4 cut(s)	664, 865, 1494, 1563
Mph1103I	ATGCAT	2 cut(s)	936, 1614
MreI	CGCCGGCG	1 cut(s)	49
MroNI	GCCGGC	1 cut(s)	49
MroXI	GAANNNNTTC	2 cut(s)	1392, 1818
MseI	TTAA	6 cut(s)	239, 1133, 1598, 1748, 1809, 1927
MspA1I	CMGCKG	1 cut(s)	1573
MspI	CCGG	3 cut(s)	44, 50, 564
MspR9I	CCNGG	7 cut(s)	283, 423, 565, 1176, 1531, 1762, 1791
Mva1269I	GAATGC	2 cut(s)	982, 1534
MvaI	CCWGG	6 cut(s)	283, 423, 1176, 1531, 1762, 1791
MvnI	CGCG	1 cut(s)	1165
MwoI	GCNNNNNNNGC	5 cut(s)	402, 470, 713, 722, 1083
NaeI	GCCGGC	1 cut(s)	51
NarI	GGCGCC	1 cut(s)	47
NciI	CCSGG	1 cut(s)	565
NcoI	CCATGG	1 cut(s)	148
NgoMIV	GCCGGC	1 cut(s)	49
NlaIV	GGNNCC	6 cut(s)	48, 332, 428, 1015, 1016, 1527
NmuCI	GTSAC	1 cut(s)	1560
NsiI	ATGCAT	2 cut(s)	936, 1614
NspI	RCATGY	2 cut(s)	1145, 1319
PagI	TCATGA	1 cut(s)	1423
PceI	AGGCCT	2 cut(s)	286, 659
PciSI	GCTCTTC	1 cut(s)	403
PctI	GAATGC	2 cut(s)	982, 1534
PdiI	GCCGGC	1 cut(s)	51
PdmI	GAANNNNTTC	2 cut(s)	1392, 1818
PfeI	GAWTC	8 cut(s)	803, 989, 1003, 1364, 1448, 1500, 1883, 1894
PkrI	GCNGC	8 cut(s)	28, 420, 727, 1058, 1637, 1676, 1679, 1865
Ple19I	CGATCG	1 cut(s)	11
PleI	GAGTC	2 cut(s)	1292, 1849
PluTI	GGCGCC	1 cut(s)	50
PpsI	GAGTC	2 cut(s)	1292, 1849
PpuMI	RGGWCCY	1 cut(s)	1014
Psp1406I	AACGTT	1 cut(s)	1728
Psp5II	RGGWCCY	1 cut(s)	1014
Psp6I	CCWGG	6 cut(s)	281, 421, 1174, 1529, 1760, 1789
PspFI	CCCAGC	1 cut(s)	1569
PspGI	CCWGG	6 cut(s)	281, 421, 1174, 1529, 1760, 1789
PspN4I	GGNNCC	6 cut(s)	48, 332, 428, 1015, 1016, 1527
PspPI	GGNCC	2 cut(s)	577, 1014
PspPPI	RGGWCCY	1 cut(s)	1014
PstI	CTGCAG	4 cut(s)	730, 1012, 1640, 1679
PstNI	CAGNNNCTG	1 cut(s)	1385
PsuI	RGATCY	2 cut(s)	115, 889
PvuI	CGATCG	1 cut(s)	11
PvuII	CAGCTG	1 cut(s)	1573
RsaI	GTAC	2 cut(s)	640, 1081
RsaNI	GTAC	2 cut(s)	639, 1080
SapI	GCTCTTC	1 cut(s)	403
SaqAI	TTAA	6 cut(s)	239, 1133, 1598, 1748, 1809, 1927
SatI	GCNGC	8 cut(s)	27, 419, 726, 1057, 1636, 1675, 1678, 1864
Sau96I	GGNCC	2 cut(s)	577, 1014
SbfI	CCTGCAGG	1 cut(s)	1012
ScaI	AGTACT	1 cut(s)	1081
SchI	GAGTC	2 cut(s)	1292, 1850
ScrFI	CCNGG	7 cut(s)	283, 423, 565, 1176, 1531, 1762, 1791
SdaI	CCTGCAGG	1 cut(s)	1012
SduI	GDGCHC	2 cut(s)	98, 453
SexAI	ACCWGGT	1 cut(s)	1174
SfaNI	GCATC	4 cut(s)	520, 853, 886, 1219
SfcI	CTRYAG	4 cut(s)	726, 1008, 1636, 1675
SfoI	GGCGCC	1 cut(s)	48
SgrAI	CRCCGGYG	1 cut(s)	49
SinI	GGWCC	2 cut(s)	577, 1014
SmlI	CTYRAG	3 cut(s)	452, 1122, 1300
SmoI	CTYRAG	3 cut(s)	452, 1122, 1300
Sse8387I	CCTGCAGG	1 cut(s)	1012
SseBI	AGGCCT	2 cut(s)	286, 659
SsiI	CCGC	6 cut(s)	26, 371, 580, 1163, 1799, 1863
SspDI	GGCGCC	1 cut(s)	46
SspMI	CTAG	6 cut(s)	141, 393, 435, 525, 774, 993
StuI	AGGCCT	2 cut(s)	286, 659
StyD4I	CCNGG	7 cut(s)	281, 421, 563, 1174, 1529, 1760, 1789
StyI	CCWWGG	2 cut(s)	148, 773
TaaI	ACNGT	1 cut(s)	1421
TaiI	ACGT	1 cut(s)	1731
TaqI	TCGA	5 cut(s)	100, 183, 588, 1490, 1498
TatI	WGTACW	2 cut(s)	638, 1079
TauI	GCSGC	2 cut(s)	29, 1866
TfiI	GAWTC	8 cut(s)	803, 989, 1003, 1364, 1448, 1500, 1883, 1894
Tru1I	TTAA	6 cut(s)	239, 1133, 1598, 1748, 1809, 1927
Tru9I	TTAA	6 cut(s)	239, 1133, 1598, 1748, 1809, 1927
TscAI	CASTG	5 cut(s)	419, 601, 1266, 1386, 1858
TseFI	GTSAC	1 cut(s)	1560
TseI	GCWGC	6 cut(s)	418, 725, 1056, 1635, 1674, 1677
Tsp45I	GTSAC	1 cut(s)	1560
TspDTI	ATGAA	8 cut(s)	17, 819, 1086, 1218, 1440, 1638, 1800, 1811
TspGWI	ACGGA	1 cut(s)	1233
TspRI	CASTG	5 cut(s)	419, 601, 1266, 1386, 1858
VpaK11BI	GGWCC	2 cut(s)	577, 1014
XapI	RAATTY	5 cut(s)	383, 619, 780, 1037, 1237
XceI	RCATGY	2 cut(s)	1145, 1319
XmaJI	CCTAGG	1 cut(s)	773
XmnI	GAANNNNTTC	2 cut(s)	1392, 1818
XspI	CTAG	6 cut(s)	141, 393, 435, 525, 774, 993
ZrmI	AGTACT	1 cut(s)	1081
Zsp2I	ATGCAT	2 cut(s)	936, 1614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.