Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002871

Physical Location & Seq

Genomic Coordinates Reverse (-)

246759 .. 252775

Gene Structure 6017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0002400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGACCTACTTCCTTGCCGTAATGGGAGTCGTCAAAGATGGGACGATATCTGGGTTTCTTCCTAGCAGCCAAGTTTTTGGTGTCCACTATCCTGGTTATCCTTCCTCCATCTCTCGAGCCATCGACACTCTCGGCGGCACCCAAGCAATCCATAAGGCTCACAGCTCACACTCCAACAACAACAACAACAGGTTGGAGCTCCATTTCCGCCATGATGACCCCTATTCGCATCCTGCATTTGGAGACCTTCGTTCCTGCAACACTTTTCTGCTTAAAATATCTAAAACTAAGTCTGCTGGTGGACAAAACGATCAAGTTTCCGCACATAACTTGGATACTTCTGTACAGTTAACTCAACCTGAAAGTGACTTACTTGATGGCAAACAACCTGAAACTGATCAAGTAACCGTTTGCGCTGATATTGTTGCTCGTGTCCCACAGGCTTATCACTTTGATGGAATGGTAGACTACCAGCATGTCATTGCTGTTCATGCTGATGTTGCACGCAAGAGAAAGAGAAACTGGGTCGAGACAGAGGAGCCGCACTTTGACAGAGGTGGTCTTATGGATATTGATCAGGAGGATGTGATGATTCTATTGCCCCAACTTTTTGCACCCAAAGATGTTCCGGATAATTTAGTGTTGAAACCATCAGGGACATTGAGTGTAAAAAAGAATCAAGAAGAACCTGTGCAGCACCAACCGGAGATGGATATGGAGCCAGTTCTTGCAATTGACTTTGGAATCACTGATATCCTAATGATTCCTAAGAGAACAAACTGGGAGGAATATATACCTCAAGATTCAGATCAGTGGGAGTCACAGATGGCCGTTTCTAGCCTGTTTGATGAGAGGCCTGTATGGCCAAAGGATTCAGTAACTGAACGCTTGCTTGATAAGGGCTGCAGTTTTTCAGATCATATGCTGAGAAGGCTTCTTTCTAGAGTTGCATACTACTTTTCTCGTGGACCGTTTCTCAGGTTCTGGATAAAAAAAGGATTTGATCCTCGGAAAGATCCTGATTCTCGCATATATCAGAAAATTGATTTTCGAGTAAAACCACCATTACAAGGTTATTGTGAGGCTAATTCAGCCAATCAACTAAAGCATAAATGGGGGGATTTATGTGCATTTCGAGTGTTTCCTTACAAGTGCCATACAACATTGCAACTCTTTGAACTTGATGATGATTACATTCAAGAACAGATAAGAAAGGCTCCAGCTCAGACAACGTGCTCTCCGGAGACGGGATGGTTTTCATATAACTTGCTTGAGAACTTGAAACATCGCGTTCAGGTGAGGTTCCTATCCGTATACCCAAGACCGGGTGCAGAGCACTTGCTCAAAGCTGCTACTGAAAGCTTTAAAAAGTCAAAGAGGATATGCAATAAAGACAACTTAGTGCGTGATGAAATTGTCCAGCAACAAGCCAATGCAGGTGATGTAGATGCGGAGGAACCCAACAATGTTGAGGATGATGAGGAAGATGATATTGAGGTTGATAACGGTGAAGAAGCATTAGATACATATGATGGACATGATCTGGCTGAGGATGGTGAAATTTCTTTGCAGCCACATTCATATCTTAACATGGAGAACATTTCAAGAACTCATTTACAGGAGCTTTTTGGTAGTTTTCCATCCCCTGAAGCAGGGGGCAATAGAATACAAGATGCATATACCAGTGATGAAGAATACCAGATTTATGAGCAAGATAGTGATGGCAACTTCTCTGACGAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

581

Amino Acids

66.25

Weight (kDa)

4.9

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tau95_N	PF17682	27 - 159	2.1e-26	Tau95 Triple barrel domain
Tau95	PF09734	198 - 351	8.2e-27	RNA polymerase III transcription factor (TF)IIIC subunit HTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002871)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g12870 FvH4_7g12880
rosa_chinensis	RchiOBHm_Chr1g0351951 RchiOBHm_Chr2g0089651 RchiOBHm_Chr2g0123231 RchiOBHm_Chr4g0439191
rosa_laevigata	RLG00000006289 RLG00000016048 RLG00000028372
rosa_multiflora	Rmu_sc0000665.1_g000025 Rmu_sc0002236.1_g000010 Rmu_sc0007728.1_g000009
rosa_roxburghii	Rroxscaffold_2G00151690 Rroxscaffold_4G00303430 Rroxscaffold_5G00380180
rosa_rugosa	Rorug01G0223100 Rorug02G0002200 Rorug02G0002300 Rorug02G0002400 Rorug04G0316500.1 Rorug04G0316600 Rorug04G0316700 Rorug04G0316800 Rorug04G0316800 Rorug04G0316900
rosa_samantha	Rh1AG237100 Rh1BG207300 Rh1CG221500 Rh1DG234300 Rh2AG047700 Rh2BG046300 Rh2CG048300 Rh2DG047700 Rh4AG367400 Rh4BG379000 Rh4CG393400 Rh4DG373600
rosa_wichuraiana	Rw1G020620 Rw2G004280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1427
Acc36I	ACCTGC	1 cut(s)	1427
AccB1I	GGYRCC	1 cut(s)	137
AccI	GTMKAC	2 cut(s)	465, 1314
AccII	CGCG	1 cut(s)	1290
AccIII	TCCGGA	2 cut(s)	628, 1240
AciI	CCGC	5 cut(s)	135, 208, 321, 542, 1451
AclWI	GGATC	2 cut(s)	998, 1010
AcoI	YGGCCR	2 cut(s)	828, 863
AcsI	RAATTY	1 cut(s)	1560
AcuI	CTGAAG	1 cut(s)	1668
AfaI	GTAC	1 cut(s)	345
AfiI	CCNNNNNNNGG	6 cut(s)	239, 1070, 1247, 1324, 1325, 1652
AgsI	TTSAA	5 cut(s)	646, 1178, 1199, 1282, 1605
AjnI	CCWGG	1 cut(s)	91
AluBI	AGCT	6 cut(s)	165, 199, 1223, 1349, 1362, 1624
AluI	AGCT	6 cut(s)	165, 199, 1223, 1349, 1362, 1624
Alw21I	GWGCWC	3 cut(s)	201, 1238, 1338
Alw26I	GTCTC	3 cut(s)	237, 524, 1238
AlwI	GGATC	2 cut(s)	998, 1010
AlwNI	CAGNNNCTG	2 cut(s)	881, 984
Ama87I	CYCGRG	1 cut(s)	114
Aor13HI	TCCGGA	2 cut(s)	628, 1240
AoxI	GGCC	3 cut(s)	828, 854, 863
ApeKI	GCWGC	5 cut(s)	66, 694, 903, 1349, 1570
ApoI	RAATTY	1 cut(s)	1560
AspLEI	GCGC	1 cut(s)	416
AspS9I	GGNCC	1 cut(s)	968
AsuC2I	CCSGG	1 cut(s)	1326
AsuHPI	GGTGA	4 cut(s)	1309, 1451, 1520, 1568
AvaI	CYCGRG	1 cut(s)	114
AvaII	GGWCC	1 cut(s)	968
BaeI	ACNNNNGTAYC	2 cut(s)	327, 360
BalI	TGGCCA	1 cut(s)	865
BanI	GGYRCC	1 cut(s)	137
BanII	GRGCYC	1 cut(s)	201
BauI	CACGAG	2 cut(s)	429, 963
Bbv12I	GWGCWC	3 cut(s)	201, 1238, 1338
BbvCI	CCTCAGC	1 cut(s)	1548
BbvI	GCAGC	5 cut(s)	78, 706, 890, 1336, 1582
BceAI	ACGGC	2 cut(s)	2, 815
BciT130I	CCWGG	1 cut(s)	93
BciVI	GTATCC	1 cut(s)	328
BclI	TGATCA	2 cut(s)	397, 574
BcnI	CCSGG	1 cut(s)	1326
BcoDI	GTCTC	3 cut(s)	237, 524, 1238
BfaI	CTAG	3 cut(s)	63, 837, 942
BfmI	CTRYAG	1 cut(s)	904
BfuAI	ACCTGC	1 cut(s)	1427
BfuI	GTATCC	1 cut(s)	328
BglI	GCCNNNNNGGC	1 cut(s)	862
BisI	GCNGC	7 cut(s)	67, 136, 542, 695, 904, 1350, 1571
BlsI	GCNGC	7 cut(s)	68, 137, 543, 696, 905, 1351, 1572
Bme1390I	CCNGG	2 cut(s)	93, 1326
Bme18I	GGWCC	1 cut(s)	968
BmeT110I	CYCGRG	1 cut(s)	114
BmgT120I	GGNCC	1 cut(s)	968
BmiI	GGNNCC	6 cut(s)	139, 540, 720, 1218, 1304, 1458
BmrFI	CCNGG	2 cut(s)	93, 1326
BmrI	ACTGGG	2 cut(s)	532, 790
BmsI	GCATC	3 cut(s)	238, 1438, 1663
BmuI	ACTGGG	2 cut(s)	532, 790
BpmI	CTGGAG	1 cut(s)	1203
Bpu10I	CCTNAGC	1 cut(s)	1548
BpuEI	CTTGAG	2 cut(s)	783, 1292
BpuMI	CCSGG	1 cut(s)	1326
BsaBI	GATNNNNATC	2 cut(s)	573, 807
BsaI	GGTCTC	1 cut(s)	237
BsaJI	CCNNGG	1 cut(s)	1007
BsaWI	WCCGGW	3 cut(s)	628, 703, 1240
BsaXI	ACNNNNNCTCC	2 cut(s)	1222, 1252
Bsc4I	CCNNNNNNNGG	6 cut(s)	239, 1070, 1247, 1324, 1325, 1652
Bse1I	ACTGG	4 cut(s)	527, 722, 785, 1683
Bse3DI	GCAATG	2 cut(s)	480, 1163
Bse8I	GATNNNNATC	2 cut(s)	573, 807
BseAI	TCCGGA	2 cut(s)	628, 1240
BseBI	CCWGG	1 cut(s)	93
BseDI	CCNNGG	1 cut(s)	1007
BseGI	GGATG	6 cut(s)	229, 589, 1256, 1480, 1558, 1640
BseJI	GATNNNNATC	2 cut(s)	573, 807
BseLI	CCNNNNNNNGG	6 cut(s)	239, 1070, 1247, 1324, 1325, 1652
BseMI	GCAATG	2 cut(s)	480, 1163
BseMII	CTCAG	4 cut(s)	917, 991, 1238, 1539
BseNI	ACTGG	4 cut(s)	527, 722, 785, 1683
BseRI	GAGGAG	1 cut(s)	551
BseXI	GCAGC	5 cut(s)	78, 706, 890, 1336, 1582
BsgI	GTGCAG	2 cut(s)	713, 1350
Bsh1236I	CGCG	1 cut(s)	1290
BshFI	GGCC	3 cut(s)	830, 856, 865
BshNI	GGYRCC	1 cut(s)	137
BsiHKAI	GWGCWC	3 cut(s)	201, 1238, 1338
BsiHKCI	CYCGRG	1 cut(s)	114
BsiSI	CCGG	4 cut(s)	629, 704, 1241, 1325
BslFI	GGGAC	3 cut(s)	55, 419, 670
BslI	CCNNNNNNNGG	6 cut(s)	239, 1070, 1247, 1324, 1325, 1652
BsmAI	GTCTC	3 cut(s)	237, 524, 1238
BsmBI	CGTCTC	1 cut(s)	1238
BsmFI	GGGAC	3 cut(s)	55, 419, 670
BsnI	GGCC	3 cut(s)	830, 856, 865
Bso31I	GGTCTC	1 cut(s)	237
BsoBI	CYCGRG	1 cut(s)	114
Bsp1286I	GDGCHC	3 cut(s)	201, 1238, 1338
Bsp13I	TCCGGA	2 cut(s)	628, 1240
Bsp1407I	TGTACA	1 cut(s)	343
Bsp143I	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
BspACI	CCGC	5 cut(s)	135, 208, 321, 542, 1451
BspANI	GGCC	3 cut(s)	830, 856, 865
BspCNI	CTCAG	4 cut(s)	918, 990, 1237, 1540
BspEI	TCCGGA	2 cut(s)	628, 1240
BspFNI	CGCG	1 cut(s)	1290
BspLI	GGNNCC	6 cut(s)	139, 540, 720, 1218, 1304, 1458
BspMAI	CTGCAG	1 cut(s)	908
BspMI	ACCTGC	1 cut(s)	1427
BspPI	GGATC	2 cut(s)	998, 1010
BspT107I	GGYRCC	1 cut(s)	137
BspTNI	GGTCTC	1 cut(s)	237
BsrDI	GCAATG	2 cut(s)	480, 1163
BsrGI	TGTACA	1 cut(s)	343
BsrI	ACTGG	4 cut(s)	527, 722, 785, 1683
BssECI	CCNNGG	1 cut(s)	1007
BssMI	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
BssNAI	GTATAC	1 cut(s)	1315
BssSI	CACGAG	2 cut(s)	429, 963
Bst1107I	GTATAC	1 cut(s)	1315
Bst2BI	CACGAG	2 cut(s)	429, 963
Bst2UI	CCWGG	1 cut(s)	93
Bst4CI	ACNGT	4 cut(s)	348, 409, 972, 1508
BstAUI	TGTACA	1 cut(s)	343
BstC8I	GCNNGC	2 cut(s)	505, 890
BstDEI	CTNAG	7 cut(s)	288, 768, 926, 977, 1224, 1399, 1548
BstENI	CCTNNNNNAGG	1 cut(s)	1650
BstF5I	GGATG	6 cut(s)	229, 589, 1256, 1480, 1558, 1640
BstFNI	CGCG	1 cut(s)	1290
BstHHI	GCGC	1 cut(s)	416
BstKTI	GATC	8 cut(s)	313, 400, 577, 811, 919, 1006, 1018, 1543
BstMAI	GTCTC	3 cut(s)	237, 524, 1238
BstMBI	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
BstMWI	GCNNNNNNNGC	5 cut(s)	491, 500, 862, 931, 1091
BstNI	CCWGG	1 cut(s)	93
BstNSI	RCATGY	1 cut(s)	479
BstSCI	CCNGG	2 cut(s)	91, 1324
BstSFI	CTRYAG	1 cut(s)	904
BstUI	CGCG	1 cut(s)	1290
BstV1I	GCAGC	5 cut(s)	78, 706, 890, 1336, 1582
BstX2I	RGATCY	1 cut(s)	1015
BstXI	CCANNNNNNTGG	2 cut(s)	77, 92
BstYI	RGATCY	1 cut(s)	1015
BstZ17I	GTATAC	1 cut(s)	1315
BsuI	GTATCC	1 cut(s)	328
BsuRI	GGCC	3 cut(s)	830, 856, 865
BtgZI	GCGATG	1 cut(s)	1271
BtsCI	GGATG	6 cut(s)	229, 589, 1256, 1480, 1558, 1640
BtsIMutI	CAGTG	3 cut(s)	747, 818, 1690
BveI	ACCTGC	1 cut(s)	1427
Cac8I	GCNNGC	2 cut(s)	505, 890
CaiI	CAGNNNCTG	2 cut(s)	881, 984
CfoI	GCGC	1 cut(s)	416
Cfr13I	GGNCC	1 cut(s)	968
Csp6I	GTAC	1 cut(s)	344
CviAII	CATG	5 cut(s)	212, 476, 491, 1538, 1591
CviQI	GTAC	1 cut(s)	344
DdeI	CTNAG	7 cut(s)	288, 768, 926, 977, 1224, 1399, 1548
DpnI	GATC	8 cut(s)	312, 399, 576, 810, 918, 1005, 1017, 1542
DpnII	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
DraI	TTTAAA	1 cut(s)	1366
EaeI	YGGCCR	2 cut(s)	828, 863
EciI	GGCGGA	1 cut(s)	197
Ecl136II	GAGCTC	1 cut(s)	199
Eco147I	AGGCCT	1 cut(s)	856
Eco24I	GRGCYC	1 cut(s)	201
Eco31I	GGTCTC	1 cut(s)	237
Eco32I	GATATC	2 cut(s)	48, 754
Eco47I	GGWCC	1 cut(s)	968
Eco53kI	GAGCTC	1 cut(s)	199
Eco57I	CTGAAG	1 cut(s)	1668
Eco88I	CYCGRG	1 cut(s)	114
EcoICRI	GAGCTC	1 cut(s)	199
EcoNI	CCTNNNNNAGG	1 cut(s)	1650
EcoRII	CCWGG	1 cut(s)	91
EcoRV	GATATC	2 cut(s)	48, 754
EcoT22I	ATGCAT	1 cut(s)	1678
EcoT38I	GRGCYC	1 cut(s)	201
Esp3I	CGTCTC	1 cut(s)	1238
FaeI	CATG	5 cut(s)	215, 479, 494, 1541, 1594
FaqI	GGGAC	3 cut(s)	55, 419, 670
FatI	CATG	5 cut(s)	211, 475, 490, 1537, 1590
FauNDI	CATATG	2 cut(s)	921, 1528
FbaI	TGATCA	2 cut(s)	397, 574
FblI	GTMKAC	2 cut(s)	465, 1314
Fnu4HI	GCNGC	7 cut(s)	67, 136, 542, 695, 904, 1350, 1571
FokI	GGATG	6 cut(s)	216, 596, 1263, 1487, 1565, 1627
FriOI	GRGCYC	1 cut(s)	201
Fsp4HI	GCNGC	7 cut(s)	67, 136, 542, 695, 904, 1350, 1571
FspBI	CTAG	3 cut(s)	63, 837, 942
GlaI	GCGC	1 cut(s)	415
GluI	GCNGC	7 cut(s)	67, 136, 542, 695, 904, 1350, 1571
GsuI	CTGGAG	1 cut(s)	1203
HaeIII	GGCC	3 cut(s)	830, 856, 865
HapII	CCGG	4 cut(s)	629, 704, 1241, 1325
HhaI	GCGC	1 cut(s)	416
Hin1II	CATG	5 cut(s)	215, 479, 494, 1541, 1594
Hin6I	GCGC	1 cut(s)	414
HinP1I	GCGC	1 cut(s)	414
HincII	GTYRAC	1 cut(s)	351
HindII	GTYRAC	1 cut(s)	351
HindIII	AAGCTT	1 cut(s)	1360
HinfI	GANTC	9 cut(s)	27, 592, 676, 744, 763, 803, 818, 872, 1022
HpaI	GTTAAC	1 cut(s)	351
HpaII	CCGG	4 cut(s)	629, 704, 1241, 1325
HphI	GGTGA	4 cut(s)	1309, 1451, 1520, 1568
Hpy166II	GTNNAC	6 cut(s)	85, 302, 351, 466, 968, 1315
Hpy188I	TCNGA	6 cut(s)	808, 916, 1011, 1038, 1227, 1735
Hpy8I	GTNNAC	6 cut(s)	85, 302, 351, 466, 968, 1315
HpyAV	CCTTC	3 cut(s)	111, 257, 924
HpyCH4III	ACNGT	4 cut(s)	348, 409, 972, 1508
HpyCH4IV	ACGT	1 cut(s)	1232
HpyF10VI	GCNNNNNNNGC	5 cut(s)	491, 500, 862, 931, 1091
HpyF3I	CTNAG	7 cut(s)	288, 768, 926, 977, 1224, 1399, 1548
HpySE526I	ACGT	1 cut(s)	1232
Hsp92II	CATG	5 cut(s)	215, 479, 494, 1541, 1594
HspAI	GCGC	1 cut(s)	414
Kpn2I	TCCGGA	2 cut(s)	628, 1240
Ksp22I	TGATCA	2 cut(s)	397, 574
KspAI	GTTAAC	1 cut(s)	351
Kzo9I	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
LmnI	GCTCC	6 cut(s)	196, 204, 538, 718, 1222, 1621
Lsp1109I	GCAGC	5 cut(s)	78, 706, 890, 1336, 1582
LweI	GCATC	3 cut(s)	238, 1438, 1663
MaeI	CTAG	3 cut(s)	63, 837, 942
MaeII	ACGT	1 cut(s)	1232
MaeIII	GTNAC	4 cut(s)	365, 403, 819, 877
MalI	GATC	8 cut(s)	312, 399, 576, 810, 918, 1005, 1017, 1542
MboI	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
MboII	GAAGA	5 cut(s)	50, 695, 1496, 1523, 1703
MfeI	CAATTG	1 cut(s)	732
MflI	RGATCY	1 cut(s)	1015
MhlI	GDGCHC	3 cut(s)	201, 1238, 1338
MlsI	TGGCCA	1 cut(s)	865
MluCI	AATT	6 cut(s)	634, 732, 1041, 1087, 1413, 1560
MluNI	TGGCCA	1 cut(s)	865
MlyI	GAGTC	2 cut(s)	36, 827
MmeI	TCCRAC	2 cut(s)	174, 198
Mox20I	TGGCCA	1 cut(s)	865
Mph1103I	ATGCAT	1 cut(s)	1678
MroI	TCCGGA	2 cut(s)	628, 1240
MscI	TGGCCA	1 cut(s)	865
MseI	TTAA	4 cut(s)	273, 350, 1365, 1587
MslI	CAYNNNNRTG	2 cut(s)	453, 495
Msp20I	TGGCCA	1 cut(s)	865
MspI	CCGG	4 cut(s)	629, 704, 1241, 1325
MspR9I	CCNGG	2 cut(s)	93, 1326
MunI	CAATTG	1 cut(s)	732
MvaI	CCWGG	1 cut(s)	93
MvnI	CGCG	1 cut(s)	1290
MwoI	GCNNNNNNNGC	5 cut(s)	491, 500, 862, 931, 1091
NciI	CCSGG	1 cut(s)	1326
NdeI	CATATG	2 cut(s)	921, 1528
NdeII	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
NlaIII	CATG	5 cut(s)	215, 479, 494, 1541, 1594
NlaIV	GGNNCC	6 cut(s)	139, 540, 720, 1218, 1304, 1458
NmeAIII	GCCGAG	1 cut(s)	111
NmuCI	GTSAC	2 cut(s)	365, 819
NsiI	ATGCAT	1 cut(s)	1678
NspI	RCATGY	1 cut(s)	479
PaeR7I	CTCGAG	1 cut(s)	114
PaqCI	CACCTGC	1 cut(s)	1427
PceI	AGGCCT	1 cut(s)	856
PfeI	GAWTC	7 cut(s)	592, 676, 744, 763, 803, 872, 1022
PkrI	GCNGC	7 cut(s)	68, 137, 543, 696, 905, 1351, 1572
PleI	GAGTC	2 cut(s)	35, 826
PpsI	GAGTC	2 cut(s)	35, 826
Psp124BI	GAGCTC	1 cut(s)	201
Psp6I	CCWGG	1 cut(s)	91
PspGI	CCWGG	1 cut(s)	91
PspN4I	GGNNCC	6 cut(s)	139, 540, 720, 1218, 1304, 1458
PspPI	GGNCC	1 cut(s)	968
PstI	CTGCAG	1 cut(s)	908
PstNI	CAGNNNCTG	2 cut(s)	881, 984
PsuI	RGATCY	1 cut(s)	1015
RsaI	GTAC	1 cut(s)	345
RsaNI	GTAC	1 cut(s)	344
RseI	CAYNNNNRTG	2 cut(s)	453, 495
SacI	GAGCTC	1 cut(s)	201
SaqAI	TTAA	4 cut(s)	273, 350, 1365, 1587
SatI	GCNGC	7 cut(s)	67, 136, 542, 695, 904, 1350, 1571
Sau3AI	GATC	8 cut(s)	310, 397, 574, 808, 916, 1003, 1015, 1540
Sau96I	GGNCC	1 cut(s)	968
SchI	GAGTC	2 cut(s)	36, 827
ScrFI	CCNGG	2 cut(s)	93, 1326
SduI	GDGCHC	3 cut(s)	201, 1238, 1338
SfaNI	GCATC	3 cut(s)	238, 1438, 1663
SfcI	CTRYAG	1 cut(s)	904
SfiI	GGCCNNNNNGGCC	1 cut(s)	862
Sfr274I	CTCGAG	1 cut(s)	114
SinI	GGWCC	1 cut(s)	968
SlaI	CTCGAG	1 cut(s)	114
SmiMI	CAYNNNNRTG	2 cut(s)	453, 495
SmlI	CTYRAG	3 cut(s)	114, 798, 1271
SmoI	CTYRAG	3 cut(s)	114, 798, 1271
Sse9I	AATT	6 cut(s)	634, 732, 1041, 1087, 1413, 1560
SseBI	AGGCCT	1 cut(s)	856
SsiI	CCGC	5 cut(s)	135, 208, 321, 542, 1451
SspMI	CTAG	3 cut(s)	63, 837, 942
SstI	GAGCTC	1 cut(s)	201
StuI	AGGCCT	1 cut(s)	856
StyD4I	CCNGG	2 cut(s)	91, 1324
TaaI	ACNGT	4 cut(s)	348, 409, 972, 1508
TaiI	ACGT	1 cut(s)	1235
TaqI	TCGA	5 cut(s)	115, 123, 528, 1051, 1135
TasI	AATT	6 cut(s)	634, 732, 1041, 1087, 1413, 1560
TatI	WGTACW	1 cut(s)	343
TauI	GCSGC	2 cut(s)	138, 544
TfiI	GAWTC	7 cut(s)	592, 676, 744, 763, 803, 872, 1022
Tru1I	TTAA	4 cut(s)	273, 350, 1365, 1587
Tru9I	TTAA	4 cut(s)	273, 350, 1365, 1587
TscAI	CASTG	3 cut(s)	754, 818, 1690
TseFI	GTSAC	2 cut(s)	365, 819
TseI	GCWGC	5 cut(s)	66, 694, 903, 1349, 1570
Tsp45I	GTSAC	2 cut(s)	365, 819
TspDTI	ATGAA	5 cut(s)	479, 1248, 1425, 1569, 1704
TspGWI	ACGGA	1 cut(s)	1300
TspRI	CASTG	3 cut(s)	754, 818, 1690
VpaK11BI	GGWCC	1 cut(s)	968
XagI	CCTNNNNNAGG	1 cut(s)	1650
XapI	RAATTY	1 cut(s)	1560
XbaI	TCTAGA	1 cut(s)	941
XceI	RCATGY	1 cut(s)	479
XhoI	CTCGAG	1 cut(s)	114
XmiI	GTMKAC	2 cut(s)	465, 1314
XspI	CTAG	3 cut(s)	63, 837, 942
Zsp2I	ATGCAT	1 cut(s)	1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.