Rorug02G0028600

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002206
Physical Location & Seq
Reverse (-)
2267369 .. 2269629
2261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0028600.1

Sequence Viewer

Length: 1302 bp
ATGGGTAGTGAACTCAAATATTTCGCCGTTCTAGCCATAACAGTGGCTGCCCTCCTTCACTCCACAGCAGCAATAGAAACCCACGTCGTTGGAGATGAATTCGGATGGATTGTTCCTCCCGGAGGTCATTACGCTTACGAAGCCTGGGCTTCCGGGCACAAATTCTCCGTCGGCGACATTCTTGAGTTCAACTTCACAACTGGTGACCAGGACGTAGCCATGGTTACAAAGGAAGCTTTCGATAGCTGCAATTCCACAAGCCCCATCGAGCTTAAAACAACTGGTCCGGCCAATTTCACATTGGATACGATTGGGTCGTACTATTTCATTGGAACCATGGACAAGCACTGCGAGTTGGGACAGAAGCTAGCCATCAACGTGACTGCTCATTCTGGATCACCTACTCCAAGCCCTTCACCTAAACCTAGTCCTACACCAAGAGGCCCTGTGACTTACGTCGTCGGCGATCATTTTGGATGGATTGTCCCACCGGGCGGTGAACTTGCTTATTCTGCTTGGGCTTACGGCAAGACTTTCTATGTTGGTGACACTCTAGAGTTCAACTTCACAACCGGAGATCAAGATGTAGCCATGGTCACAAAACAAGCTTACGAGAGCTGCAATTTTAATAAATCCCAAATCACAATATTAACAACTGGACCGGCCTATATCAAGCTGAATCTCACAGGCGAGTATTACTTCATTGGCACCATGGACAAGCACTGCGAATTGGGACAAAAGCTAGCCATCAACGTGACTACAAATCCTGGTGGCCCTTCAGCCTCCCCTACTCCTGCTCCTGCTCCTGCTCGTACTGGTCCAGTGACTTACATCGTCGGCGATCAATTGGGTTGGTTTGTGCCCGGTCAATATGATTATTCTGCTTGGGCTAACGGCAAAACTTTTATCGTTGGAGACACGCTAGTTTTCAACTTCATCAACGGGACACAAGATGTAGCTGTCGTGACCAAGGCTGTTTTTGACAACTGCACCACCAATAGCACCCTAGCTGTTTTTAAAAATAGTCCGGTGAACATCATCCTCAACACCACCGGTGAACACTACTTCACATCCACCTACGATCGCCACTGCGAATTGGGACAGAAGCTAGCGATTAACGTGACCGCCAAGAGCACAGGAACGGCCACGTCTCCCTCGAGCTCCACAACGCCTTCTTCATATGCTCCGTCAGCTCATTCACCGGCCGCTTCTGGTCCATACAACTCTGCCGCCCCTTCCACCATTAATGGCAGTGGCTACTTCTTCACCTTCTTGCTCATTGGATTGGCTTTCTTCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000418 GO:0000419 GO:0000428 GO:0000785 GO:0000790 GO:0000792 GO:0002682 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005720 GO:0005730 GO:0005736 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009620 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016020 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019222 GO:0019438 GO:0030422 GO:0030880 GO:0031047 GO:0031050 GO:0031974 GO:0031981 GO:0032259 GO:0032774 GO:0032991 GO:0034062 GO:0034641 GO:0034654 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044452 GO:0044454 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0048583 GO:0050776 GO:0050789 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097747 GO:0098542 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1901698 GO:1901699 GO:1902494 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko00230 ko00240 ko01100 ko03020 ko05016 ko05169 map00230 map00240 map01100 map03020 map05016 map05169
Pfam Domains
Protein Families
RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7

Protein Analysis

433

Amino Acids

46.16

Weight (kDa)

5.38

Isoelectric Point (pI)

35.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu_bind_like PF02298 44 - 121 3.1e-20 Plastocyanin-like domain
Cu_bind_like PF02298 168 - 246 2.8e-20 Plastocyanin-like domain
Cu_bind_like PF02298 285 - 368 2.3e-22 Plastocyanin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 707
AciI CCGC 4 cut(s) 495, 1125, 1206, 1230
AclWI GGATC 1 cut(s) 403
AcoI YGGCCR 3 cut(s) 288, 1143, 1203
AcsI RAATTY 2 cut(s) 98, 161
AcuI CTGAAG 1 cut(s) 762
AfaI GTAC 2 cut(s) 320, 814
AfiI CCNNNNNNNGG 2 cut(s) 122, 494
AgeI ACCGGT 1 cut(s) 1052
AgsI TTSAA 3 cut(s) 190, 562, 931
AjiI CACGTC 2 cut(s) 85, 1149
AjnI CCWGG 3 cut(s) 143, 207, 766
AloI GAACNNNNNNTCC 2 cut(s) 96, 128
Alw21I GWGCWC 2 cut(s) 1136, 1163
Alw26I GTCTC 2 cut(s) 909, 1155
AlwI GGATC 1 cut(s) 403
AlwNI CAGNNNCTG 1 cut(s) 47
Ama87I CYCGRG 1 cut(s) 1156
AoxI GGCC 6 cut(s) 288, 442, 663, 772, 1143, 1203
ApeKI GCWGC 4 cut(s) 47, 68, 246, 618
ApoI RAATTY 2 cut(s) 98, 161
ArsI GACNNNNNNTTYG 2 cut(s) 153, 185
AseI ATTAAT 1 cut(s) 1245
AsiGI ACCGGT 1 cut(s) 1052
AspS9I GGNCC 6 cut(s) 284, 443, 659, 773, 818, 1214
AsuC2I CCSGG 4 cut(s) 120, 154, 492, 864
AsuHPI GGTGA 9 cut(s) 215, 390, 408, 509, 557, 1042, 1067, 1191, 1258
AsuNHI GCTAGC 3 cut(s) 367, 742, 1108
AvaI CYCGRG 1 cut(s) 1156
AvaII GGWCC 4 cut(s) 284, 659, 818, 1214
BaeGI GKGCMC 2 cut(s) 159, 864
BanI GGYRCC 1 cut(s) 707
BanII GRGCYC 1 cut(s) 1163
Bbv12I GWGCWC 2 cut(s) 1136, 1163
BbvI GCAGC 4 cut(s) 34, 80, 233, 605
BccI CCATC 5 cut(s) 99, 272, 380, 471, 755
BceAI ACGGC 4 cut(s) 11, 541, 910, 1158
BciT130I CCWGG 3 cut(s) 145, 209, 768
BciVI GTATCC 1 cut(s) 298
BcnI CCSGG 4 cut(s) 120, 154, 492, 864
BcoDI GTCTC 2 cut(s) 909, 1155
BfaI CTAG 8 cut(s) 32, 368, 426, 554, 743, 923, 1007, 1109
BfuI GTATCC 1 cut(s) 298
BisI GCNGC 6 cut(s) 48, 69, 247, 619, 1206, 1230
BlsI GCNGC 6 cut(s) 49, 70, 248, 620, 1207, 1231
Bme1390I CCNGG 7 cut(s) 120, 145, 154, 209, 492, 768, 864
Bme18I GGWCC 4 cut(s) 284, 659, 818, 1214
BmeT110I CYCGRG 1 cut(s) 1156
BmgBI CACGTC 2 cut(s) 85, 1149
BmgT120I GGNCC 6 cut(s) 284, 443, 659, 773, 818, 1214
BmiI GGNNCC 2 cut(s) 334, 709
BmrFI CCNGG 7 cut(s) 120, 145, 154, 209, 492, 768, 864
BmtI GCTAGC 3 cut(s) 371, 746, 1112
BoxI GACNNNNGTC 1 cut(s) 455
BpuEI CTTGAG 1 cut(s) 203
BpuMI CCSGG 4 cut(s) 120, 154, 492, 864
BsaJI CCNNGG 6 cut(s) 144, 219, 336, 591, 711, 969
BsaWI WCCGGW 3 cut(s) 572, 1027, 1052
BsaXI ACNNNNNCTCC 4 cut(s) 149, 179, 781, 811
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 494
Bse118I RCCGGY 3 cut(s) 661, 1052, 1201
Bse1I ACTGG 5 cut(s) 205, 286, 661, 820, 821
BseBI CCWGG 3 cut(s) 145, 209, 768
BseDI CCNNGG 6 cut(s) 144, 219, 336, 591, 711, 969
BseGI GGATG 4 cut(s) 110, 482, 1038, 1070
BseLI CCNNNNNNNGG 2 cut(s) 122, 494
BseNI ACTGG 5 cut(s) 205, 286, 661, 820, 821
BseSI GKGCMC 2 cut(s) 159, 864
BseX3I CGGCCG 1 cut(s) 1203
BseXI GCAGC 4 cut(s) 34, 80, 233, 605
BsgI GTGCAG 1 cut(s) 973
Bsh1285I CGRYCG 2 cut(s) 1084, 1206
BshFI GGCC 6 cut(s) 290, 444, 665, 774, 1145, 1205
BshNI GGYRCC 1 cut(s) 707
BshTI ACCGGT 1 cut(s) 1052
BsiEI CGRYCG 2 cut(s) 1084, 1206
BsiHKAI GWGCWC 2 cut(s) 1136, 1163
BsiHKCI CYCGRG 1 cut(s) 1156
BslFI GGGAC 5 cut(s) 372, 470, 747, 958, 1113
BslI CCNNNNNNNGG 2 cut(s) 122, 494
BsmAI GTCTC 2 cut(s) 909, 1155
BsmBI CGTCTC 1 cut(s) 1155
BsmFI GGGAC 5 cut(s) 372, 470, 747, 958, 1113
BsnI GGCC 6 cut(s) 290, 444, 665, 774, 1145, 1205
BsoBI CYCGRG 1 cut(s) 1156
Bsp1286I GDGCHC 4 cut(s) 159, 864, 1136, 1163
Bsp143I GATC 5 cut(s) 395, 466, 577, 841, 1081
Bsp19I CCATGG 4 cut(s) 219, 336, 591, 711
BspACI CCGC 4 cut(s) 495, 1125, 1206, 1230
BspANI GGCC 6 cut(s) 290, 444, 665, 774, 1145, 1205
BspLI GGNNCC 2 cut(s) 334, 709
BspOI GCTAGC 3 cut(s) 371, 746, 1112
BspPI GGATC 1 cut(s) 403
BspT107I GGYRCC 1 cut(s) 707
BsrFI RCCGGY 3 cut(s) 661, 1052, 1201
BsrI ACTGG 5 cut(s) 205, 286, 661, 820, 821
BssAI RCCGGY 3 cut(s) 661, 1052, 1201
BssECI CCNNGG 6 cut(s) 144, 219, 336, 591, 711, 969
BssMI GATC 5 cut(s) 395, 466, 577, 841, 1081
BssT1I CCWWGG 5 cut(s) 219, 336, 591, 711, 969
Bst2UI CCWGG 3 cut(s) 145, 209, 768
Bst4CI ACNGT 1 cut(s) 43
BstC8I GCNNGC 3 cut(s) 369, 744, 1110
BstDSI CCRYGG 4 cut(s) 219, 336, 591, 711
BstEII GGTNACC 1 cut(s) 203
BstENI CCTNNNNNAGG 1 cut(s) 120
BstF5I GGATG 4 cut(s) 110, 482, 1038, 1070
BstKTI GATC 5 cut(s) 398, 469, 580, 844, 1084
BstMAI GTCTC 2 cut(s) 909, 1155
BstMBI GATC 5 cut(s) 395, 466, 577, 841, 1081
BstMCI CGRYCG 2 cut(s) 1084, 1206
BstMWI GCNNNNNNNGC 4 cut(s) 32, 140, 512, 1190
BstNI CCWGG 3 cut(s) 145, 209, 768
BstPAI GACNNNNGTC 1 cut(s) 455
BstPI GGTNACC 1 cut(s) 203
BstSCI CCNGG 7 cut(s) 118, 143, 152, 207, 490, 766, 862
BstSLI GKGCMC 2 cut(s) 159, 864
BstV1I GCAGC 4 cut(s) 34, 80, 233, 605
BstXI CCANNNNNNTGG 2 cut(s) 43, 89
BstZI CGGCCG 1 cut(s) 1203
BsuI GTATCC 1 cut(s) 298
BsuRI GGCC 6 cut(s) 290, 444, 665, 774, 1145, 1205
BtgI CCRYGG 4 cut(s) 219, 336, 591, 711
BtrI CACGTC 2 cut(s) 85, 1149
BtsCI GGATG 4 cut(s) 110, 482, 1038, 1070
BtsI GCAGTG 4 cut(s) 346, 721, 1087, 1258
BtsIMutI CAGTG 6 cut(s) 48, 346, 721, 828, 1087, 1258
Cac8I GCNNGC 3 cut(s) 369, 744, 1110
CaiI CAGNNNCTG 1 cut(s) 47
Cfr10I RCCGGY 3 cut(s) 661, 1052, 1201
Cfr13I GGNCC 6 cut(s) 284, 443, 659, 773, 818, 1214
Csp6I GTAC 2 cut(s) 319, 813
CspAI ACCGGT 1 cut(s) 1052
CviAII CATG 4 cut(s) 220, 337, 592, 712
CviQI GTAC 2 cut(s) 319, 813
DpnI GATC 5 cut(s) 397, 468, 579, 843, 1083
DpnII GATC 5 cut(s) 395, 466, 577, 841, 1081
DraI TTTAAA 1 cut(s) 1018
EaeI YGGCCR 3 cut(s) 288, 1143, 1203
EagI CGGCCG 1 cut(s) 1203
Ecl136II GAGCTC 1 cut(s) 1161
EclXI CGGCCG 1 cut(s) 1203
Eco130I CCWWGG 5 cut(s) 219, 336, 591, 711, 969
Eco24I GRGCYC 1 cut(s) 1163
Eco47I GGWCC 4 cut(s) 284, 659, 818, 1214
Eco52I CGGCCG 1 cut(s) 1203
Eco53kI GAGCTC 1 cut(s) 1161
Eco57I CTGAAG 1 cut(s) 762
Eco88I CYCGRG 1 cut(s) 1156
Eco91I GGTNACC 1 cut(s) 203
EcoICRI GAGCTC 1 cut(s) 1161
EcoNI CCTNNNNNAGG 1 cut(s) 120
EcoO109I RGGNCCY 1 cut(s) 443
EcoO65I GGTNACC 1 cut(s) 203
EcoRI GAATTC 1 cut(s) 98
EcoRII CCWGG 3 cut(s) 143, 207, 766
EcoT14I CCWWGG 5 cut(s) 219, 336, 591, 711, 969
EcoT38I GRGCYC 1 cut(s) 1163
ErhI CCWWGG 5 cut(s) 219, 336, 591, 711, 969
Esp3I CGTCTC 1 cut(s) 1155
FaeI CATG 4 cut(s) 223, 340, 595, 715
FaqI GGGAC 5 cut(s) 372, 470, 747, 958, 1113
FatI CATG 4 cut(s) 219, 336, 591, 711
FauNDI CATATG 1 cut(s) 1180
Fnu4HI GCNGC 6 cut(s) 48, 69, 247, 619, 1206, 1230
FokI GGATG 4 cut(s) 117, 489, 1025, 1057
FriOI GRGCYC 1 cut(s) 1163
Fsp4HI GCNGC 6 cut(s) 48, 69, 247, 619, 1206, 1230
FspBI CTAG 8 cut(s) 32, 368, 426, 554, 743, 923, 1007, 1109
GluI GCNGC 6 cut(s) 48, 69, 247, 619, 1206, 1230
HaeIII GGCC 6 cut(s) 290, 444, 665, 774, 1145, 1205
Hin1II CATG 4 cut(s) 223, 340, 595, 715
HindIII AAGCTT 2 cut(s) 234, 606
HinfI GANTC 1 cut(s) 679
HphI GGTGA 9 cut(s) 215, 390, 408, 509, 557, 1042, 1067, 1191, 1258
Hpy166II GTNNAC 4 cut(s) 11, 500, 1033, 1058
Hpy188I TCNGA 1 cut(s) 104
Hpy188III TCNNGA 5 cut(s) 182, 393, 554, 581, 964
Hpy8I GTNNAC 4 cut(s) 11, 500, 1033, 1058
Hpy99I CGWCG 5 cut(s) 89, 173, 461, 464, 839
HpyAV CCTTC 6 cut(s) 65, 423, 786, 1182, 1245, 1279
HpyCH4III ACNGT 1 cut(s) 43
HpyCH4IV ACGT 7 cut(s) 84, 213, 378, 456, 753, 1119, 1148
HpyCH4V TGCA 3 cut(s) 249, 621, 990
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 140, 512, 1190
HpySE526I ACGT 7 cut(s) 84, 213, 378, 456, 753, 1119, 1148
Hsp92II CATG 4 cut(s) 223, 340, 595, 715
Kzo9I GATC 5 cut(s) 395, 466, 577, 841, 1081
LmnI GCTCC 4 cut(s) 802, 808, 1166, 1189
Lsp1109I GCAGC 4 cut(s) 34, 80, 233, 605
MaeI CTAG 8 cut(s) 32, 368, 426, 554, 743, 923, 1007, 1109
MaeII ACGT 7 cut(s) 84, 213, 378, 456, 753, 1119, 1148
MalI GATC 5 cut(s) 397, 468, 579, 843, 1083
MboI GATC 5 cut(s) 395, 466, 577, 841, 1081
MboII GAAGA 3 cut(s) 1167, 1255, 1285
MfeI CAATTG 1 cut(s) 845
MhlI GDGCHC 4 cut(s) 159, 864, 1136, 1163
MluCI AATT 8 cut(s) 98, 161, 250, 292, 622, 728, 845, 1094
MmeI TCCRAC 2 cut(s) 70, 892
MnlI CCTC 7 cut(s) 62, 116, 126, 434, 793, 1052, 1165
MseI TTAA 6 cut(s) 273, 627, 650, 1017, 1116, 1245
MslI CAYNNNNRTG 3 cut(s) 41, 377, 752
MspR9I CCNGG 7 cut(s) 120, 145, 154, 209, 492, 768, 864
MunI CAATTG 1 cut(s) 845
MvaI CCWGG 3 cut(s) 145, 209, 768
MwoI GCNNNNNNNGC 4 cut(s) 32, 140, 512, 1190
NciI CCSGG 4 cut(s) 120, 154, 492, 864
NcoI CCATGG 4 cut(s) 219, 336, 591, 711
NdeI CATATG 1 cut(s) 1180
NdeII GATC 5 cut(s) 395, 466, 577, 841, 1081
NheI GCTAGC 3 cut(s) 367, 742, 1108
NlaIII CATG 4 cut(s) 223, 340, 595, 715
NlaIV GGNNCC 2 cut(s) 334, 709
NmuCI GTSAC 9 cut(s) 203, 379, 448, 545, 595, 754, 823, 964, 1120
PaeR7I CTCGAG 1 cut(s) 1156
PcsI WCGNNNNNNNCGW 3 cut(s) 314, 462, 1154
PfeI GAWTC 1 cut(s) 679
PfoI TCCNGGA 1 cut(s) 118
PinAI ACCGGT 1 cut(s) 1052
PkrI GCNGC 6 cut(s) 49, 70, 248, 620, 1207, 1231
Ple19I CGATCG 1 cut(s) 1084
PshAI GACNNNNGTC 1 cut(s) 455
PshBI ATTAAT 1 cut(s) 1245
Psp124BI GAGCTC 1 cut(s) 1163
Psp6I CCWGG 3 cut(s) 143, 207, 766
PspEI GGTNACC 1 cut(s) 203
PspGI CCWGG 3 cut(s) 143, 207, 766
PspN4I GGNNCC 2 cut(s) 334, 709
PspPI GGNCC 6 cut(s) 284, 443, 659, 773, 818, 1214
PspXI VCTCGAGB 1 cut(s) 1156
PstNI CAGNNNCTG 1 cut(s) 47
PvuI CGATCG 1 cut(s) 1084
RsaI GTAC 2 cut(s) 320, 814
RsaNI GTAC 2 cut(s) 319, 813
RseI CAYNNNNRTG 3 cut(s) 41, 377, 752
SacI GAGCTC 1 cut(s) 1163
SaqAI TTAA 6 cut(s) 273, 627, 650, 1017, 1116, 1245
SatI GCNGC 6 cut(s) 48, 69, 247, 619, 1206, 1230
Sau3AI GATC 5 cut(s) 395, 466, 577, 841, 1081
Sau96I GGNCC 6 cut(s) 284, 443, 659, 773, 818, 1214
ScrFI CCNGG 7 cut(s) 120, 145, 154, 209, 492, 768, 864
SduI GDGCHC 4 cut(s) 159, 864, 1136, 1163
Sfr274I CTCGAG 1 cut(s) 1156
SgrAI CRCCGGYG 1 cut(s) 1052
SinI GGWCC 4 cut(s) 284, 659, 818, 1214
SlaI CTCGAG 1 cut(s) 1156
SmiMI CAYNNNNRTG 3 cut(s) 41, 377, 752
SmlI CTYRAG 2 cut(s) 182, 1156
SmoI CTYRAG 2 cut(s) 182, 1156
Sse9I AATT 8 cut(s) 98, 161, 250, 292, 622, 728, 845, 1094
SsiI CCGC 4 cut(s) 495, 1125, 1206, 1230
SspI AATATT 2 cut(s) 20, 648
SspMI CTAG 8 cut(s) 32, 368, 426, 554, 743, 923, 1007, 1109
SstI GAGCTC 1 cut(s) 1163
StyD4I CCNGG 7 cut(s) 118, 143, 152, 207, 490, 766, 862
StyI CCWWGG 5 cut(s) 219, 336, 591, 711, 969
TaaI ACNGT 1 cut(s) 43
TaiI ACGT 7 cut(s) 87, 216, 381, 459, 756, 1122, 1151
TaqI TCGA 3 cut(s) 240, 267, 1157
TasI AATT 8 cut(s) 98, 161, 250, 292, 622, 728, 845, 1094
TauI GCSGC 2 cut(s) 1208, 1232
TfiI GAWTC 1 cut(s) 679
Tru1I TTAA 6 cut(s) 273, 627, 650, 1017, 1116, 1245
Tru9I TTAA 6 cut(s) 273, 627, 650, 1017, 1116, 1245
TscAI CASTG 6 cut(s) 48, 353, 728, 828, 1094, 1258
TseFI GTSAC 9 cut(s) 203, 379, 448, 545, 595, 754, 823, 964, 1120
TseI GCWGC 4 cut(s) 47, 68, 246, 618
Tsp45I GTSAC 9 cut(s) 203, 379, 448, 545, 595, 754, 823, 964, 1120
TspDTI ATGAA 5 cut(s) 111, 316, 691, 925, 1167
TspGWI ACGGA 2 cut(s) 157, 1176
TspRI CASTG 6 cut(s) 48, 353, 728, 828, 1094, 1258
VpaK11BI GGWCC 4 cut(s) 284, 659, 818, 1214
VspI ATTAAT 1 cut(s) 1245
XagI CCTNNNNNAGG 1 cut(s) 120
XapI RAATTY 2 cut(s) 98, 161
XbaI TCTAGA 1 cut(s) 553
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
XhoI CTCGAG 1 cut(s) 1156
XspI CTAG 8 cut(s) 32, 368, 426, 554, 743, 923, 1007, 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.