Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004342

Physical Location & Seq

Genomic Coordinates Forward (+)

32733124 .. 32742779

Gene Structure 9656 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0188200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTCGCAGTGGGCTTGTGTCTCTGCCACCAACTTGAGCTACCAAGCCAACTTCATCAACACCCAAAACCCACAAACCACTCCCAGATATGATGCGCTCTCCTTTCACGGCAGTGAAATTGTTGCTCGGAATTTTGGGTTTCTGAGCTCACAAGCTACTACTAGTATTGGTAAAAGGCTGAGGAAGGGTGCTCTCCCTTTGAAGGTGGTTTGTGTGGATTATCCGAGACCCGAGCTTGACAATACTGTAAATTTCTTAGAAGCTGCGCTCTTGTCTTCCTCCTTTCGATCCTCTTCTCGCCCAGCTAAGCCCCTGAAGGTTGTGATTGCTGGTGCAGGTTTGGCTGGGTTGTCAACTGCAAAGTATTTGGCAGATGCAGGTCATAAACCCATACTACTCGAAGCAAGAGACGTTTTGGGTGGAAAGATTGCAGCATGGAAAGATAAAGATGGAGACTGGTATGAGACAGGCCTACATATATTTTTTGGGGCTTATCCAAATATTCAGAACTTGTTTGGAGAGCTTGGTATCGATGATCGATTGCAGTGGAAGGAACACTCTATGATATTTGCAATGCCAAACAAGCCAGGAGAGTTCAGCCGGTTTGATTTCCCTGAAGTTCTGCCAGCACCCTTAAATGGAATATGGGCCATATTAAAGAACAATGAGATGCTGACATGGCCAGAAAAAGTGAAGTTTGCTATCGGACTTGTGCCAGCAATTCTTGGTGGACAGGCTTATGTTGAAGCTCAGGATGGCTTGACTGTAAAGGAGTGGATGACAAAACAGGGGATACCTGATCGAGTAACTACTGAGGTGTTTATTGCCATGTCAAAGGCCCTTAACTTTATTAATCCTGATGAGCTCTCAATGCAATGCATATTGATTGCTTTGAATCGATTTCTTCAGGAGAAACACGGTTCCAAGATGGCTTTCCTTGATGGAAGTCCTCCCGAGAGACTCTGTCAACCAATCGTTGATCATATCCAGTCATTGGGGGGTGAAGTCCGGCTTAATTCCCGATTACAGAAGATTGAGCTAAATAATGATGGAACAGTGAAGAGTTTTGTACTACAAAATAACAGTGTGATTGAAGCGGATGCTTATGTATCTGCCGCTCCAGTCGATATCTTCAAGCTTCTAGTGCCTGAAAACTGGAAAGAGATTCCATATTTCAAGAAATTGGACAAACTAGTTGGGGTTCCAGTCATCAATGTACACATATGGTTTGACAGAAAACTAAAGAACACATATGATCACCTACTTTTTAGCAGAAGTCCTCTTCTAAGTGTGTATGCTGATATGTCGGTAACATGTAAGGAGTATTACAATCCAAATCAGTCTATGCTGGAGTTGGTTTTTGCACCAGCAGAAGAATGGATTTCACGCAGTGATTCAGAAATTATTGATGCTACACTCAAAGAACTTGCAAAGCTCTTTCCCGATGAGATAGCTGCAGATCAAAGCAAAGCGAAGATTTTGAAGTACCATGTTGTTAAAACACCAAGGTCTGTGTACAAAACTATACCAGATTGTGAACCTTGTCGTCCGTTGCAAAGATCTCCCTTGGAGGGTTTCTATTTAACTGGTGACTATACAAAACAAAAATACTTAGCCTCTATGGAAGGTGCTGTTCTATCAGGGAAACTTTGTGCACAGGCGATTGTACAGGACTATGAATTGCTCGTTGCTCGGGGCCAGAAAAGGTTGGCAGAGGCAGGTGCTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

576

Amino Acids

64.31

Weight (kDa)

7.55

Isoelectric Point (pI)

40.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAD_binding_8	PF13450	109 - 175	5e-14	NAD(P)-binding Rossmann-like domain
Amino_oxidase	PF01593	114 - 555	6.5e-94	Flavin containing amine oxidoreductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004342)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15990 AT4G16000 AT4G16024
fragaria_vesca	FvH4_4g18730 FvH4_4g25960
malus_domestica	MD16G1163500.v1.1
rosa_chinensis	RchiOBHm_Chr4g0423471 RchiOBHm_Chr4g0423481
rosa_laevigata	RLG00000007556 RLG00000007557
rosa_roxburghii	Rroxscaffold_5G00365680 Rroxscaffold_5G00365690 Rroxscaffold_5G00365710
rosa_rugosa	Rorug04G0187800 Rorug04G0187900 Rorug04G0188200 Rorug04G0188300 Rorug05G0470000
rosa_samantha	Rh2AG302600 Rh2DG326700 Rh3DG172500 Rh4AG246500 Rh4AG246900 Rh4AG247000 Rh4BG252000 Rh4BG252300 Rh4BG252400 Rh4CG260500 Rh4CG260700 Rh4CG260800 Rh4DG247300 Rh4DG247400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1709
Acc36I	ACCTGC	3 cut(s)	326, 368, 1709
AccB7I	CCANNNNNTGG	1 cut(s)	994
AccBSI	CCGCTC	1 cut(s)	1118
AciI	CCGC	2 cut(s)	1097, 1116
AclWI	GGATC	1 cut(s)	282
AcoI	YGGCCR	1 cut(s)	680
AcsI	RAATTY	2 cut(s)	130, 250
AcuI	CTGAAG	3 cut(s)	335, 636, 890
AdeI	CACNNNGTG	1 cut(s)	1391
AfaI	GTAC	5 cut(s)	1071, 1218, 1487, 1517, 1668
AfiI	CCNNNNNNNGG	4 cut(s)	202, 638, 994, 1571
AflIII	ACRYGT	1 cut(s)	1313
AgsI	TTSAA	7 cut(s)	202, 746, 895, 1094, 1135, 1177, 1483
AhlI	ACTAGT	2 cut(s)	161, 1192
AjnI	CCWGG	1 cut(s)	586
AjuI	GAANNNNNNNTTGG	2 cut(s)	917, 949
AleI	CACNNNNGTG	1 cut(s)	111
Alw21I	GWGCWC	5 cut(s)	149, 193, 867, 1657, 1726
Alw26I	GTCTC	6 cut(s)	25, 220, 402, 447, 458, 952
Alw44I	GTGCAC	1 cut(s)	1653
AlwI	GGATC	1 cut(s)	282
Ama87I	CYCGRG	3 cut(s)	230, 953, 1692
AoxI	GGCC	5 cut(s)	469, 648, 680, 837, 1696
ApaLI	GTGCAC	1 cut(s)	1653
ApeKI	GCWGC	3 cut(s)	263, 431, 1454
ApoI	RAATTY	2 cut(s)	130, 250
AseI	ATTAAT	1 cut(s)	852
AspLEI	GCGC	2 cut(s)	97, 268
AspS9I	GGNCC	3 cut(s)	648, 838, 1696
AsuHPI	GGTGA	3 cut(s)	1013, 1250, 1601
AvaI	CYCGRG	3 cut(s)	230, 953, 1692
BaeGI	GKGCMC	1 cut(s)	1657
BalI	TGGCCA	1 cut(s)	682
BanII	GRGCYC	2 cut(s)	149, 867
BbsI	GAAGAC	1 cut(s)	267
Bbv12I	GWGCWC	5 cut(s)	149, 193, 867, 1657, 1726
BbvCI	CCTCAGC	1 cut(s)	179
BbvI	GCAGC	3 cut(s)	250, 443, 1441
BccI	CCATC	5 cut(s)	443, 749, 922, 935, 1043
BceAI	ACGGC	1 cut(s)	124
BciT130I	CCWGG	1 cut(s)	588
BciVI	GTATCC	1 cut(s)	786
BclI	TGATCA	2 cut(s)	979, 1255
BcoDI	GTCTC	6 cut(s)	25, 220, 402, 447, 458, 952
BcuI	ACTAGT	2 cut(s)	161, 1192
BfaI	CTAG	3 cut(s)	162, 1142, 1193
BfmI	CTRYAG	1 cut(s)	1455
BfuAI	ACCTGC	3 cut(s)	326, 368, 1709
BfuI	GTATCC	1 cut(s)	786
BglII	AGATCT	1 cut(s)	1559
BisI	GCNGC	4 cut(s)	264, 432, 1116, 1455
BlpI	GCTNAGC	1 cut(s)	306
BlsI	GCNGC	4 cut(s)	265, 433, 1117, 1456
Bme1390I	CCNGG	1 cut(s)	588
BmeT110I	CYCGRG	3 cut(s)	230, 953, 1692
BmgT120I	GGNCC	3 cut(s)	648, 838, 1696
BmiI	GGNNCC	3 cut(s)	922, 1203, 1697
BmrFI	CCNGG	1 cut(s)	588
BmsI	GCATC	5 cut(s)	82, 364, 660, 1090, 1399
BpiI	GAAGAC	1 cut(s)	267
BpmI	CTGGAG	2 cut(s)	1104, 1370
Bpu10I	CCTNAGC	2 cut(s)	179, 750
Bpu1102I	GCTNAGC	1 cut(s)	306
BpuEI	CTTGAG	1 cut(s)	55
Bsa29I	ATCGAT	3 cut(s)	531, 538, 898
BsaI	GGTCTC	1 cut(s)	220
BsaJI	CCNNGG	2 cut(s)	1505, 1566
Bsc4I	CCNNNNNNNGG	4 cut(s)	202, 638, 994, 1571
Bse118I	RCCGGY	1 cut(s)	600
Bse1I	ACTGG	6 cut(s)	461, 988, 1121, 1160, 1205, 1591
Bse3DI	GCAATG	2 cut(s)	579, 881
BseBI	CCWGG	1 cut(s)	588
BseCI	ATCGAT	3 cut(s)	531, 538, 898
BseDI	CCNNGG	2 cut(s)	1505, 1566
BseGI	GGATG	3 cut(s)	760, 783, 1105
BseLI	CCNNNNNNNGG	4 cut(s)	202, 638, 994, 1571
BseMI	GCAATG	2 cut(s)	579, 881
BseMII	CTCAG	4 cut(s)	134, 170, 764, 804
BseNI	ACTGG	6 cut(s)	461, 988, 1121, 1160, 1205, 1591
BseSI	GKGCMC	1 cut(s)	1657
BseXI	GCAGC	3 cut(s)	250, 443, 1441
BseYI	CCCAGC	2 cut(s)	301, 344
BsgI	GTGCAG	1 cut(s)	354
BshFI	GGCC	5 cut(s)	471, 650, 682, 839, 1698
BshVI	ATCGAT	3 cut(s)	531, 538, 898
BsiHKAI	GWGCWC	5 cut(s)	149, 193, 867, 1657, 1726
BsiHKCI	CYCGRG	3 cut(s)	230, 953, 1692
BsiSI	CCGG	2 cut(s)	601, 1009
BslI	CCNNNNNNNGG	4 cut(s)	202, 638, 994, 1571
BsmAI	GTCTC	6 cut(s)	25, 220, 402, 447, 458, 952
BsmBI	CGTCTC	1 cut(s)	402
BsnI	GGCC	5 cut(s)	471, 650, 682, 839, 1698
Bso31I	GGTCTC	1 cut(s)	220
BsoBI	CYCGRG	3 cut(s)	230, 953, 1692
Bsp1286I	GDGCHC	5 cut(s)	149, 193, 867, 1657, 1726
Bsp1407I	TGTACA	3 cut(s)	1216, 1515, 1666
Bsp143I	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
Bsp1720I	GCTNAGC	1 cut(s)	306
BspACI	CCGC	2 cut(s)	1097, 1116
BspANI	GGCC	5 cut(s)	471, 650, 682, 839, 1698
BspCNI	CTCAG	4 cut(s)	135, 171, 763, 805
BspDI	ATCGAT	3 cut(s)	531, 538, 898
BspLI	GGNNCC	3 cut(s)	922, 1203, 1697
BspMAI	CTGCAG	1 cut(s)	1459
BspMI	ACCTGC	3 cut(s)	326, 368, 1709
BspPI	GGATC	1 cut(s)	282
BspTNI	GGTCTC	1 cut(s)	220
BsrBI	CCGCTC	1 cut(s)	1118
BsrDI	GCAATG	2 cut(s)	579, 881
BsrFI	RCCGGY	1 cut(s)	600
BsrGI	TGTACA	3 cut(s)	1216, 1515, 1666
BsrI	ACTGG	6 cut(s)	461, 988, 1121, 1160, 1205, 1591
BssAI	RCCGGY	1 cut(s)	600
BssECI	CCNNGG	2 cut(s)	1505, 1566
BssMI	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
BssT1I	CCWWGG	2 cut(s)	1505, 1566
Bst2UI	CCWGG	1 cut(s)	588
Bst4CI	ACNGT	5 cut(s)	247, 766, 920, 1057, 1085
Bst6I	CTCTTC	3 cut(s)	298, 1055, 1287
BstAUI	TGTACA	3 cut(s)	1216, 1515, 1666
BstC8I	GCNNGC	2 cut(s)	627, 717
BstDEI	CTNAG	8 cut(s)	143, 179, 256, 306, 750, 813, 1286, 1612
BstF5I	GGATG	3 cut(s)	760, 783, 1105
BstHHI	GCGC	2 cut(s)	97, 268
BstKTI	GATC	7 cut(s)	290, 538, 802, 982, 1258, 1462, 1562
BstMAI	GTCTC	6 cut(s)	25, 220, 402, 447, 458, 952
BstMBI	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
BstMWI	GCNNNNNNNGC	5 cut(s)	341, 583, 679, 871, 1144
BstNI	CCWGG	1 cut(s)	588
BstNSI	RCATGY	1 cut(s)	1317
BstSCI	CCNGG	1 cut(s)	586
BstSFI	CTRYAG	1 cut(s)	1455
BstSLI	GKGCMC	1 cut(s)	1657
BstV1I	GCAGC	3 cut(s)	250, 443, 1441
BstV2I	GAAGAC	1 cut(s)	267
BstX2I	RGATCY	1 cut(s)	1559
BstYI	RGATCY	1 cut(s)	1559
Bsu15I	ATCGAT	3 cut(s)	531, 538, 898
BsuI	GTATCC	1 cut(s)	786
BsuRI	GGCC	5 cut(s)	471, 650, 682, 839, 1698
BsuTUI	ATCGAT	3 cut(s)	531, 538, 898
BtsCI	GGATG	3 cut(s)	760, 783, 1105
BtsI	GCAGTG	4 cut(s)	14, 118, 551, 1396
BtsIMutI	CAGTG	6 cut(s)	14, 118, 551, 1062, 1090, 1396
BveI	ACCTGC	3 cut(s)	326, 368, 1709
Cac8I	GCNNGC	2 cut(s)	627, 717
CfoI	GCGC	2 cut(s)	97, 268
Cfr10I	RCCGGY	1 cut(s)	600
Cfr13I	GGNCC	3 cut(s)	648, 838, 1696
ClaI	ATCGAT	3 cut(s)	531, 538, 898
Csp6I	GTAC	5 cut(s)	1070, 1217, 1486, 1516, 1667
CviAII	CATG	5 cut(s)	435, 678, 829, 1314, 1490
CviQI	GTAC	5 cut(s)	1070, 1217, 1486, 1516, 1667
DdeI	CTNAG	8 cut(s)	143, 179, 256, 306, 750, 813, 1286, 1612
DpnI	GATC	7 cut(s)	289, 537, 801, 981, 1257, 1461, 1561
DpnII	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
DraIII	CACNNNGTG	1 cut(s)	1391
EaeI	YGGCCR	1 cut(s)	680
Eam1104I	CTCTTC	3 cut(s)	298, 1055, 1287
EarI	CTCTTC	3 cut(s)	298, 1055, 1287
Ecl136II	GAGCTC	2 cut(s)	147, 865
Eco130I	CCWWGG	2 cut(s)	1505, 1566
Eco147I	AGGCCT	1 cut(s)	471
Eco24I	GRGCYC	2 cut(s)	149, 867
Eco31I	GGTCTC	1 cut(s)	220
Eco32I	GATATC	1 cut(s)	1129
Eco53kI	GAGCTC	2 cut(s)	147, 865
Eco57I	CTGAAG	3 cut(s)	335, 636, 890
Eco88I	CYCGRG	3 cut(s)	230, 953, 1692
EcoICRI	GAGCTC	2 cut(s)	147, 865
EcoO109I	RGGNCCY	1 cut(s)	838
EcoRII	CCWGG	1 cut(s)	586
EcoRV	GATATC	1 cut(s)	1129
EcoT14I	CCWWGG	2 cut(s)	1505, 1566
EcoT22I	ATGCAT	1 cut(s)	881
EcoT38I	GRGCYC	2 cut(s)	149, 867
ErhI	CCWWGG	2 cut(s)	1505, 1566
Esp3I	CGTCTC	1 cut(s)	402
FaeI	CATG	5 cut(s)	438, 681, 832, 1317, 1493
FalI	AAGNNNNNCTT	2 cut(s)	996, 1028
FatI	CATG	5 cut(s)	434, 677, 828, 1313, 1489
FauNDI	CATATG	2 cut(s)	1223, 1252
FbaI	TGATCA	2 cut(s)	979, 1255
Fnu4HI	GCNGC	4 cut(s)	264, 432, 1116, 1455
FokI	GGATG	3 cut(s)	767, 790, 1112
FriOI	GRGCYC	2 cut(s)	149, 867
Fsp4HI	GCNGC	4 cut(s)	264, 432, 1116, 1455
FspBI	CTAG	3 cut(s)	162, 1142, 1193
GlaI	GCGC	2 cut(s)	96, 267
GluI	GCNGC	4 cut(s)	264, 432, 1116, 1455
GsaI	CCCAGC	2 cut(s)	305, 348
GsuI	CTGGAG	2 cut(s)	1104, 1370
HaeIII	GGCC	5 cut(s)	471, 650, 682, 839, 1698
HapII	CCGG	2 cut(s)	601, 1009
HhaI	GCGC	2 cut(s)	97, 268
Hin1II	CATG	5 cut(s)	438, 681, 832, 1317, 1493
Hin6I	GCGC	2 cut(s)	95, 266
HinP1I	GCGC	2 cut(s)	95, 266
HincII	GTYRAC	2 cut(s)	354, 968
HindII	GTYRAC	2 cut(s)	354, 968
HindIII	AAGCTT	1 cut(s)	1136
HinfI	GANTC	4 cut(s)	895, 960, 1165, 1394
HpaII	CCGG	2 cut(s)	601, 1009
HphI	GGTGA	3 cut(s)	1013, 1250, 1601
Hpy166II	GTNNAC	7 cut(s)	354, 731, 968, 1219, 1516, 1538, 1655
Hpy188I	TCNGA	6 cut(s)	129, 144, 225, 507, 707, 1399
Hpy188III	TCNNGA	7 cut(s)	752, 857, 908, 953, 1020, 1177, 1442
Hpy8I	GTNNAC	7 cut(s)	354, 731, 968, 1219, 1516, 1538, 1655
HpyAV	CCTTC	5 cut(s)	178, 196, 310, 544, 1619
HpyCH4III	ACNGT	5 cut(s)	247, 766, 920, 1057, 1085
HpyCH4IV	ACGT	1 cut(s)	411
HpyF10VI	GCNNNNNNNGC	5 cut(s)	341, 583, 679, 871, 1144
HpyF3I	CTNAG	8 cut(s)	143, 179, 256, 306, 750, 813, 1286, 1612
HpySE526I	ACGT	1 cut(s)	411
Hsp92II	CATG	5 cut(s)	438, 681, 832, 1317, 1493
HspAI	GCGC	2 cut(s)	95, 266
Ksp22I	TGATCA	2 cut(s)	979, 1255
Kzo9I	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
LmnI	GCTCC	1 cut(s)	1123
Lsp1109I	GCAGC	3 cut(s)	250, 443, 1441
LweI	GCATC	5 cut(s)	82, 364, 660, 1090, 1399
MaeI	CTAG	3 cut(s)	162, 1142, 1193
MaeII	ACGT	1 cut(s)	411
MaeIII	GTNAC	3 cut(s)	805, 1309, 1589
MalI	GATC	7 cut(s)	289, 537, 801, 981, 1257, 1461, 1561
MbiI	CCGCTC	1 cut(s)	1118
MboI	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
MboII	GAAGA	9 cut(s)	267, 285, 896, 1042, 1072, 1123, 1274, 1385, 1486
MflI	RGATCY	1 cut(s)	1559
MhlI	GDGCHC	5 cut(s)	149, 193, 867, 1657, 1726
MlsI	TGGCCA	1 cut(s)	682
MluCI	AATT	8 cut(s)	117, 130, 250, 720, 1015, 1181, 1401, 1679
MluNI	TGGCCA	1 cut(s)	682
MlyI	GAGTC	1 cut(s)	954
MnlI	CCTC	9 cut(s)	174, 289, 301, 808, 960, 1290, 1564, 1627, 1708
Mox20I	TGGCCA	1 cut(s)	682
Mph1103I	ATGCAT	1 cut(s)	881
MscI	TGGCCA	1 cut(s)	682
MseI	TTAA	7 cut(s)	635, 656, 843, 852, 1014, 1497, 1583
MslI	CAYNNNNRTG	1 cut(s)	111
Msp20I	TGGCCA	1 cut(s)	682
MspI	CCGG	2 cut(s)	601, 1009
MspR9I	CCNGG	1 cut(s)	588
MvaI	CCWGG	1 cut(s)	588
MwoI	GCNNNNNNNGC	5 cut(s)	341, 583, 679, 871, 1144
NdeI	CATATG	2 cut(s)	1223, 1252
NdeII	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
NlaIII	CATG	5 cut(s)	438, 681, 832, 1317, 1493
NlaIV	GGNNCC	3 cut(s)	922, 1203, 1697
NmuCI	GTSAC	1 cut(s)	1589
NsiI	ATGCAT	1 cut(s)	881
NspI	RCATGY	1 cut(s)	1317
OliI	CACNNNNGTG	1 cut(s)	111
PaqCI	CACCTGC	1 cut(s)	1709
PceI	AGGCCT	1 cut(s)	471
PciI	ACATGT	1 cut(s)	1313
PfeI	GAWTC	3 cut(s)	895, 1165, 1394
PflFI	GACNNNGTC	1 cut(s)	963
PflMI	CCANNNNNTGG	1 cut(s)	994
PkrI	GCNGC	4 cut(s)	265, 433, 1117, 1456
PleI	GAGTC	1 cut(s)	954
PpsI	GAGTC	1 cut(s)	954
PscI	ACATGT	1 cut(s)	1313
PshBI	ATTAAT	1 cut(s)	852
Psp124BI	GAGCTC	2 cut(s)	149, 867
Psp6I	CCWGG	1 cut(s)	586
PspFI	CCCAGC	2 cut(s)	301, 344
PspGI	CCWGG	1 cut(s)	586
PspN4I	GGNNCC	3 cut(s)	922, 1203, 1697
PspPI	GGNCC	3 cut(s)	648, 838, 1696
PstI	CTGCAG	1 cut(s)	1459
PsuI	RGATCY	1 cut(s)	1559
PsyI	GACNNNGTC	1 cut(s)	963
RsaI	GTAC	5 cut(s)	1071, 1218, 1487, 1517, 1668
RsaNI	GTAC	5 cut(s)	1070, 1217, 1486, 1516, 1667
RseI	CAYNNNNRTG	1 cut(s)	111
SacI	GAGCTC	2 cut(s)	149, 867
SaqAI	TTAA	7 cut(s)	635, 656, 843, 852, 1014, 1497, 1583
SatI	GCNGC	4 cut(s)	264, 432, 1116, 1455
Sau3AI	GATC	7 cut(s)	287, 535, 799, 979, 1255, 1459, 1559
Sau96I	GGNCC	3 cut(s)	648, 838, 1696
SchI	GAGTC	1 cut(s)	954
ScrFI	CCNGG	1 cut(s)	588
SduI	GDGCHC	5 cut(s)	149, 193, 867, 1657, 1726
SfaNI	GCATC	5 cut(s)	82, 364, 660, 1090, 1399
SfcI	CTRYAG	1 cut(s)	1455
SmiMI	CAYNNNNRTG	1 cut(s)	111
SmlI	CTYRAG	1 cut(s)	34
SmoI	CTYRAG	1 cut(s)	34
SpeI	ACTAGT	2 cut(s)	161, 1192
Sse9I	AATT	8 cut(s)	117, 130, 250, 720, 1015, 1181, 1401, 1679
SseBI	AGGCCT	1 cut(s)	471
SsiI	CCGC	2 cut(s)	1097, 1116
SspI	AATATT	1 cut(s)	502
SspMI	CTAG	3 cut(s)	162, 1142, 1193
SstI	GAGCTC	2 cut(s)	149, 867
StuI	AGGCCT	1 cut(s)	471
StyD4I	CCNGG	1 cut(s)	586
StyI	CCWWGG	2 cut(s)	1505, 1566
TaaI	ACNGT	5 cut(s)	247, 766, 920, 1057, 1085
TaiI	ACGT	1 cut(s)	414
TaqI	TCGA	8 cut(s)	286, 399, 531, 538, 802, 898, 1125, 1726
TasI	AATT	8 cut(s)	117, 130, 250, 720, 1015, 1181, 1401, 1679
TatI	WGTACW	4 cut(s)	1069, 1216, 1515, 1666
TauI	GCSGC	1 cut(s)	1118
TfiI	GAWTC	3 cut(s)	895, 1165, 1394
Tru1I	TTAA	7 cut(s)	635, 656, 843, 852, 1014, 1497, 1583
Tru9I	TTAA	7 cut(s)	635, 656, 843, 852, 1014, 1497, 1583
TscAI	CASTG	6 cut(s)	14, 118, 551, 1062, 1090, 1396
TseFI	GTSAC	1 cut(s)	1589
TseI	GCWGC	3 cut(s)	263, 431, 1454
Tsp45I	GTSAC	1 cut(s)	1589
TspDTI	ATGAA	2 cut(s)	43, 1692
TspGWI	ACGGA	1 cut(s)	1539
TspRI	CASTG	6 cut(s)	14, 118, 551, 1062, 1090, 1396
Tth111I	GACNNNGTC	1 cut(s)	963
Van91I	CCANNNNNTGG	1 cut(s)	994
VneI	GTGCAC	1 cut(s)	1653
VspI	ATTAAT	1 cut(s)	852
XapI	RAATTY	2 cut(s)	130, 250
XceI	RCATGY	1 cut(s)	1317
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1374
XspI	CTAG	3 cut(s)	162, 1142, 1193
Zsp2I	ATGCAT	1 cut(s)	881

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.