Rorug04G0188300

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0004342
Physical Location & Seq
Forward (+)
32753933 .. 32758165
4233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0188300.1

Sequence Viewer

Length: 2601 bp
ATGGTTGTAGATGTTGCTGCATCTGCTGCTGCATCTGCTGTAGGACTAGCATTATCGCTGCTGTGTAAGGCCATTGAGGAAGTTATCAGAAAGTGCGTGATCGACAAGATTGTGGAGTTCAATCCCCTGCTCAAGAAGATCAATACCAAGCTGAAGACAGTGAAGCCAGGGATAGAAGAGATCGAGAAAAGCAATCTAGAATTGGATCGCACAGGTGAATTGAAAGATTTCAAACAAGTAATCGAGGATATCACAGCGTTTGTTCGTGAGTTACAAGAGGTTCCCCATTGGTACAAGAAACCTAAATACACCAACAAACTCAAAGAACTCGATGAATCTCTGGATACACAGATAATGTTACTGCAGGTGCCGACAGCAAGTAAGGTCTCTAACCTTTCGGTTATAACAAGTATTATCGAGGGGGACACCAGAAATATCCGTATGCAAATGGGGAATATGAGTGTGCAAGTGGGGAGTATGAGTATGCAAATGGAGAATATGGGTATGCAAATAGAGGATTTGAATACGAACCTTGAGATGATCAGGGATATGCGACAGAATGGCCTAGTGCAAAATCAAGTTAAAGGTTGTTGGTCTGGAGTACCTGAACCGCCATCATTTACAGTTGGATTGGATTTACGTTTGGATGAATTGAAGAAGAAACTTCTTGAGGATGGGGTGTCAATGGGTCTGGTCACTGGTCATCCAGGCTCTGGGAAAACCACTTTGGCAAAAGCTCTTTGTCAAGATAAGAAAGTGAAAGACAAATTCAAGGGCATCATCTTTGTCGACGTTTCAAAAAGACCCAACACTGAGGTTGTGCAGGAAATATGTGAAAAAAAGGGTACCCAAATACTTTCTTTCCAATCCGAAGAAATTGCACTTGACTGGCTGCAACAACTTCTGAATAACACAGAAGAAGATCCTGTGCTTTTGGTCCTGGATAACGTTTGGCCTGGAAACAGGACAGAATCCCTCCTGGCGAGCTTTAAGTTCAAAGAATCGGAAATGTCAAATTACAAGATTTTGGTGACATCAAGATATATGTTGCCAGGATTTGATGTTGAATACCACGTAGAAGAATTGAATGACATTGATGCAATGAGTCTTCTCCGTAATTCAGCACGCCTCACAAGTTCTTCTTCTATTCCAGAAGATCTTCAGAGACAGGTTGTGGAGTGCTGTAAGAGACTTCCACTGGCTATTGAAGTGGTCGGAAGATCACTTTTCGGCAAGAATATTGTGATCTGGAAAGATAGAGTGGAAGCATGGTCTAGCGGTTCTTCTGTCATTAAGTCTGAAAAACATTTGCTTGTTTGCCTCCAAAGTAGTTTAGATGCCCTGGGTGAAGAAAATGCCCTCATCAAGGAATGTTTCATGGACCTTGCTTCATTTCCTCAAGGCCGAAGGATTCCTGCTTCTGTCCTGATTGATATCTGGAGTGTCCTCATTGATATGTGGGCTGCGGATAAAGATAGTTCATGTGTTGCAAAACTCTACGAGCTCACCTACTGGAGGCTGGCTAATCTTGTAATCACGAGGAATGAGAAGGGGGAGGTGGATGACTACTATGGTGAACACTTCGTGACCCAACATGATCTCCTTAGAGAGCTGGCTGTCCACCAGACAGATGAGGGCCCTGTAAAACTGAGGAGAAGACTGATTATAAACATACGTGGAAACAAACTTCCCAAATGGTGGAAAAAACAGATGGATCAGCCCTTCGAAGAAGTTCTCCTAGTATCTATTTCAACTGATAGTCTCTTCTCATCAAAATGGCGCGACATACAGCTACCGAAAGCTAAAGTTCTAGTTCTGAATTTCCACACAAAGAACTATGCATTGCCCGAATTTGTGAAGAAAATGGAGAAATTGAAGGTTCTAATAGTCACAAATTATGGGTTCTTACCAGCTGAAGTGAGTAATTTTACATTGCTGGGTTCTTCATCTAAACTAAAGAGGATAAGATTAGAGCGGATTTCTCTTTCTTCCATTACCAAGAACCCCATAGTATTGAAGAGACTACAGAAGATATCTTTCTTCATGTGTAACATGGGGCAAGCTTTTAGCAAAGGTTCCATCAAATTTTTTGAGGCATTCCCAGACCTTCAAGAAATCAACATTGACTATTGCAGTGATTTGGTGGAATTACCTGTTGACATCTGTCTTCTAATCCATCTGAAAAAGCTCAGCATCACCAACTGTCATAAGCTATCTGCCTTGCCTGAAATGATTGGGGAGCTAGTCAATTTAGAAGTTTTGAGGTTAAGGTCCTGCACAGACTTGTCAGAGCTGCCAAGTTCAGTTAGGAAACTCAAAAAACTAAAGGTTCTTGACATATCCAATTGCTACAGCATTAAGGAGTTGCCTGAACACATTGGTGAAATGTGCTGCTTACAAAAGCTCAACATGAGGCAGTGCTCGAGAATGCAAGAGCTGCCTGAATCAATTTTGGATCTTGAAACGTTGACTGATGTGATATGTGATGAAGAGACAAAATTGTTTTGGGAAACTTACTCGCCCTGTCTCAGCAACCACATACAGATAACGGCGGTCAAAGAGGAAATCAACCTAGATTGGCTTTATATGCGTCACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

866

Amino Acids

98.62

Weight (kDa)

6.14

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 12 - 116 6.7e-13 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 215 - 349 1.7e-15 NB-ARC domain
AAA_22 PF13401 228 - 317 1e-07 AAA domain
LRR_14 PF23598 706 - 782 1.5e-10 Leucine-rich repeat region
LRR_14 PF23598 775 - 834 8.8e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 404, 1667
AarI CACCTGC 1 cut(s) 355
Acc36I ACCTGC 1 cut(s) 355
Acc65I GGTACC 1 cut(s) 845
AccB1I GGYRCC 2 cut(s) 367, 845
AccB7I CCANNNNNTGG 2 cut(s) 713, 1698
AccBSI CCGCTC 1 cut(s) 1975
AccI GTMKAC 1 cut(s) 789
AccII CGCG 1 cut(s) 1782
AciI CCGC 5 cut(s) 611, 1278, 1466, 1975, 2552
AclI AACGTT 2 cut(s) 948, 2465
AclWI GGATC 4 cut(s) 213, 917, 1722, 2463
AcsI RAATTY 4 cut(s) 767, 1819, 1850, 2084
AcuI CTGAAG 3 cut(s) 173, 1145, 1935
AdeI CACNNNGTG 1 cut(s) 1585
AfaI GTAC 3 cut(s) 293, 603, 847
AfiI CCNNNNNNNGG 4 cut(s) 713, 1366, 1515, 1698
AjnI CCWGG 7 cut(s) 166, 706, 939, 955, 978, 1051, 1341
AjuI GAANNNNNNNTTGG 2 cut(s) 710, 742
AleI CACNNNNGTG 1 cut(s) 2379
Alw21I GWGCWC 2 cut(s) 1506, 2423
Alw26I GTCTC 7 cut(s) 391, 1159, 1183, 1766, 2014, 2486, 2531
AlwI GGATC 4 cut(s) 213, 917, 1722, 2463
AlwNI CAGNNNCTG 1 cut(s) 713
Ama87I CYCGRG 1 cut(s) 2422
AoxI GGCC 5 cut(s) 69, 562, 953, 1402, 1636
ApaI GGGCCC 1 cut(s) 1640
ApeKI GCWGC 9 cut(s) 17, 26, 29, 58, 892, 1463, 2293, 2391, 2437
ApoI RAATTY 4 cut(s) 767, 1819, 1850, 2084
Asp700I GAANNNNTTC 3 cut(s) 227, 1158, 1731
Asp718I GGTACC 1 cut(s) 845
AspLEI GCGC 1 cut(s) 1782
AspS9I GGNCC 5 cut(s) 937, 1381, 1636, 1637, 2271
AsuHPI GGTGA 7 cut(s) 227, 1042, 1358, 1498, 1586, 2188, 2393
AsuII TTCGAA 1 cut(s) 1725
AvaI CYCGRG 1 cut(s) 2422
AvaII GGWCC 3 cut(s) 937, 1381, 2271
BaeGI GKGCMC 1 cut(s) 1640
BanI GGYRCC 2 cut(s) 367, 845
BanII GRGCYC 2 cut(s) 1506, 1640
BauI CACGAG 1 cut(s) 1537
BbsI GAAGAC 4 cut(s) 161, 1100, 1663, 2159
Bbv12I GWGCWC 2 cut(s) 1506, 2423
BbvI GCAGC 9 cut(s) 4, 13, 16, 45, 879, 1450, 2280, 2378, 2424
BccI CCATC 5 cut(s) 622, 668, 1705, 2087, 2184
BceAI ACGGC 1 cut(s) 2565
BcgI CGANNNNNNTGC 2 cut(s) 860, 894
BciT130I CCWGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
BciVI GTATCC 1 cut(s) 337
BclI TGATCA 1 cut(s) 540
BcoDI GTCTC 7 cut(s) 391, 1159, 1183, 1766, 2014, 2486, 2531
BfaI CTAG 8 cut(s) 47, 197, 566, 1275, 1739, 1811, 2243, 2573
BfmI CTRYAG 4 cut(s) 39, 362, 2024, 2350
BfuAI ACCTGC 1 cut(s) 355
BfuI GTATCC 1 cut(s) 337
BglII AGATCT 1 cut(s) 1156
BisI GCNGC 9 cut(s) 18, 27, 30, 59, 893, 1464, 2294, 2392, 2438
BlpI GCTNAGC 1 cut(s) 2189
BlsI GCNGC 9 cut(s) 19, 28, 31, 60, 894, 1465, 2295, 2393, 2439
Bme1390I CCNGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
Bme18I GGWCC 3 cut(s) 937, 1381, 2271
BmeT110I CYCGRG 1 cut(s) 2422
BmgT120I GGNCC 5 cut(s) 937, 1381, 1636, 1637, 2271
BmiI GGNNCC 5 cut(s) 282, 369, 847, 1638, 2077
BmrFI CCNGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
BmsI GCATC 6 cut(s) 29, 41, 786, 1087, 1327, 2202
BoxI GACNNNNGTC 1 cut(s) 2163
BpiI GAAGAC 4 cut(s) 161, 1100, 1663, 2159
BpmI CTGGAG 3 cut(s) 618, 1459, 1534
Bpu1102I GCTNAGC 1 cut(s) 2189
Bpu14I TTCGAA 1 cut(s) 1725
BpuEI CTTGAG 4 cut(s) 116, 554, 689, 1383
BsaAI YACGTR 2 cut(s) 1075, 1676
BsaBI GATNNNNATC 1 cut(s) 1433
BsaI GGTCTC 1 cut(s) 391
BsaJI CCNNGG 3 cut(s) 167, 1341, 1342
BsaXI ACNNNNNCTCC 4 cut(s) 466, 496, 1584, 1614
Bsc4I CCNNNNNNNGG 4 cut(s) 713, 1366, 1515, 1698
Bse1I ACTGG 4 cut(s) 703, 893, 1203, 1517
Bse3DI GCAATG 3 cut(s) 1107, 1841, 1931
Bse8I GATNNNNATC 1 cut(s) 1433
BseBI CCWGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
BseDI CCNNGG 3 cut(s) 167, 1341, 1342
BseGI GGATG 4 cut(s) 652, 679, 703, 1567
BseJI GATNNNNATC 1 cut(s) 1433
BseLI CCNNNNNNNGG 4 cut(s) 713, 1366, 1515, 1698
BseMI GCAATG 3 cut(s) 1107, 1841, 1931
BseMII CTCAG 4 cut(s) 804, 1640, 2203, 2542
BseNI ACTGG 4 cut(s) 703, 893, 1203, 1517
BseRI GAGGAG 1 cut(s) 1666
BseSI GKGCMC 1 cut(s) 1640
BseXI GCAGC 9 cut(s) 4, 13, 16, 45, 879, 1450, 2280, 2378, 2424
BseYI CCCAGC 1 cut(s) 1936
BsgI GTGCAG 2 cut(s) 842, 2260
Bsh1236I CGCG 1 cut(s) 1782
BshFI GGCC 5 cut(s) 71, 564, 955, 1404, 1638
BshNI GGYRCC 2 cut(s) 367, 845
BsiHKAI GWGCWC 2 cut(s) 1506, 2423
BsiHKCI CYCGRG 1 cut(s) 2422
BslFI GGGAC 1 cut(s) 437
BslI CCNNNNNNNGG 4 cut(s) 713, 1366, 1515, 1698
BsmAI GTCTC 7 cut(s) 391, 1159, 1183, 1766, 2014, 2486, 2531
BsmFI GGGAC 1 cut(s) 437
BsmI GAATGC 2 cut(s) 2096, 2433
BsnI GGCC 5 cut(s) 71, 564, 955, 1404, 1638
Bso31I GGTCTC 1 cut(s) 391
BsoBI CYCGRG 1 cut(s) 2422
Bsp119I TTCGAA 1 cut(s) 1725
Bsp120I GGGCCC 1 cut(s) 1636
Bsp1286I GDGCHC 3 cut(s) 1506, 1640, 2423
Bsp1720I GCTNAGC 1 cut(s) 2189
BspACI CCGC 5 cut(s) 611, 1278, 1466, 1975, 2552
BspANI GGCC 5 cut(s) 71, 564, 955, 1404, 1638
BspCNI CTCAG 4 cut(s) 805, 1641, 2202, 2541
BspFNI CGCG 1 cut(s) 1782
BspLI GGNNCC 5 cut(s) 282, 369, 847, 1638, 2077
BspMAI CTGCAG 1 cut(s) 366
BspMI ACCTGC 1 cut(s) 355
BspPI GGATC 4 cut(s) 213, 917, 1722, 2463
BspT104I TTCGAA 1 cut(s) 1725
BspT107I GGYRCC 2 cut(s) 367, 845
BspTNI GGTCTC 1 cut(s) 391
BsrBI CCGCTC 1 cut(s) 1975
BsrDI GCAATG 3 cut(s) 1107, 1841, 1931
BsrI ACTGG 4 cut(s) 703, 893, 1203, 1517
BssECI CCNNGG 3 cut(s) 167, 1341, 1342
BssSI CACGAG 1 cut(s) 1537
Bst2BI CACGAG 1 cut(s) 1537
Bst2UI CCWGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
Bst4CI ACNGT 3 cut(s) 160, 625, 2204
Bst6I CTCTTC 4 cut(s) 171, 1769, 2012, 2484
BstAPI GCANNNNNTGC 2 cut(s) 26, 2437
BstBAI YACGTR 2 cut(s) 1075, 1676
BstBI TTCGAA 1 cut(s) 1725
BstC8I GCNNGC 5 cut(s) 985, 1126, 1521, 1614, 2061
BstDEI CTNAG 5 cut(s) 813, 1604, 1649, 2189, 2528
BstENI CCTNNNNNAGG 2 cut(s) 1364, 1513
BstF5I GGATG 4 cut(s) 652, 679, 703, 1567
BstFNI CGCG 1 cut(s) 1782
BstHHI GCGC 1 cut(s) 1782
BstMAI GTCTC 7 cut(s) 391, 1159, 1183, 1766, 2014, 2486, 2531
BstMWI GCNNNNNNNGC 5 cut(s) 23, 26, 35, 2437, 2587
BstNI CCWGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
BstPAI GACNNNNGTC 1 cut(s) 2163
BstSCI CCNGG 7 cut(s) 166, 706, 939, 955, 978, 1051, 1341
BstSFI CTRYAG 4 cut(s) 39, 362, 2024, 2350
BstSLI GKGCMC 1 cut(s) 1640
BstUI CGCG 1 cut(s) 1782
BstV1I GCAGC 9 cut(s) 4, 13, 16, 45, 879, 1450, 2280, 2378, 2424
BstV2I GAAGAC 4 cut(s) 161, 1100, 1663, 2159
BstX2I RGATCY 3 cut(s) 922, 1156, 2455
BstYI RGATCY 3 cut(s) 922, 1156, 2455
BsuI GTATCC 1 cut(s) 337
BsuRI GGCC 5 cut(s) 71, 564, 955, 1404, 1638
BtsCI GGATG 4 cut(s) 652, 679, 703, 1567
BtsI GCAGTG 2 cut(s) 2140, 2423
BtsIMutI CAGTG 6 cut(s) 165, 696, 810, 1196, 2140, 2423
BveI ACCTGC 1 cut(s) 355
Cac8I GCNNGC 5 cut(s) 985, 1126, 1521, 1614, 2061
CaiI CAGNNNCTG 1 cut(s) 713
CfoI GCGC 1 cut(s) 1782
Cfr13I GGNCC 5 cut(s) 937, 1381, 1636, 1637, 2271
CseI GACGC 1 cut(s) 2579
Csp6I GTAC 3 cut(s) 292, 602, 846
CviAII CATG 7 cut(s) 1269, 1378, 1482, 1595, 2044, 2053, 2410
CviQI GTAC 3 cut(s) 292, 602, 846
DdeI CTNAG 5 cut(s) 813, 1604, 1649, 2189, 2528
DraIII CACNNNGTG 1 cut(s) 1585
Eam1104I CTCTTC 4 cut(s) 171, 1769, 2012, 2484
EarI CTCTTC 4 cut(s) 171, 1769, 2012, 2484
Ecl136II GAGCTC 1 cut(s) 1504
Eco24I GRGCYC 2 cut(s) 1506, 1640
Eco31I GGTCTC 1 cut(s) 391
Eco32I GATATC 3 cut(s) 250, 1435, 2034
Eco47I GGWCC 3 cut(s) 937, 1381, 2271
Eco53kI GAGCTC 1 cut(s) 1504
Eco57I CTGAAG 3 cut(s) 173, 1145, 1935
Eco88I CYCGRG 1 cut(s) 2422
EcoICRI GAGCTC 1 cut(s) 1504
EcoNI CCTNNNNNAGG 2 cut(s) 1364, 1513
EcoO109I RGGNCCY 3 cut(s) 1636, 1637, 2271
EcoRII CCWGG 7 cut(s) 166, 706, 939, 955, 978, 1051, 1341
EcoRV GATATC 3 cut(s) 250, 1435, 2034
EcoT22I ATGCAT 1 cut(s) 1843
EcoT38I GRGCYC 2 cut(s) 1506, 1640
FaeI CATG 7 cut(s) 1272, 1381, 1485, 1598, 2047, 2056, 2413
FalI AAGNNNNNCTT 2 cut(s) 1126, 1158
FaqI GGGAC 1 cut(s) 437
FatI CATG 7 cut(s) 1268, 1377, 1481, 1594, 2043, 2052, 2409
FbaI TGATCA 1 cut(s) 540
FblI GTMKAC 1 cut(s) 789
Fnu4HI GCNGC 9 cut(s) 18, 27, 30, 59, 893, 1464, 2294, 2392, 2438
FokI GGATG 4 cut(s) 659, 686, 690, 1574
FriOI GRGCYC 2 cut(s) 1506, 1640
Fsp4HI GCNGC 9 cut(s) 18, 27, 30, 59, 893, 1464, 2294, 2392, 2438
FspBI CTAG 8 cut(s) 47, 197, 566, 1275, 1739, 1811, 2243, 2573
GlaI GCGC 1 cut(s) 1781
GluI GCNGC 9 cut(s) 18, 27, 30, 59, 893, 1464, 2294, 2392, 2438
GsaI CCCAGC 1 cut(s) 1940
GsuI CTGGAG 3 cut(s) 618, 1459, 1534
HaeIII GGCC 5 cut(s) 71, 564, 955, 1404, 1638
HgaI GACGC 1 cut(s) 2579
HhaI GCGC 1 cut(s) 1782
Hin1II CATG 7 cut(s) 1272, 1381, 1485, 1598, 2047, 2056, 2413
Hin6I GCGC 1 cut(s) 1780
HinP1I GCGC 1 cut(s) 1780
HincII GTYRAC 3 cut(s) 790, 2158, 2469
HindII GTYRAC 3 cut(s) 790, 2158, 2469
HindIII AAGCTT 1 cut(s) 2061
HinfI GANTC 6 cut(s) 335, 971, 1001, 1105, 1411, 2444
HphI GGTGA 7 cut(s) 227, 1042, 1358, 1498, 1586, 2188, 2393
Hpy166II GTNNAC 5 cut(s) 790, 1577, 1621, 2158, 2469
Hpy8I GTNNAC 5 cut(s) 790, 1577, 1621, 2158, 2469
Hpy99I CGWCG 1 cut(s) 794
HpyAV CCTTC 5 cut(s) 1401, 1543, 1732, 1870, 2117
HpyCH4III ACNGT 3 cut(s) 160, 625, 2204
HpyCH4IV ACGT 6 cut(s) 640, 792, 948, 1074, 1675, 2465
HpyF10VI GCNNNNNNNGC 5 cut(s) 23, 26, 35, 2437, 2587
HpyF3I CTNAG 5 cut(s) 813, 1604, 1649, 2189, 2528
HpySE526I ACGT 6 cut(s) 640, 792, 948, 1074, 1675, 2465
Hsp92II CATG 7 cut(s) 1272, 1381, 1485, 1598, 2047, 2056, 2413
HspAI GCGC 1 cut(s) 1780
KpnI GGTACC 1 cut(s) 849
Ksp22I TGATCA 1 cut(s) 540
LmnI GCTCC 1 cut(s) 2239
Lsp1109I GCAGC 9 cut(s) 4, 13, 16, 45, 879, 1450, 2280, 2378, 2424
LweI GCATC 6 cut(s) 29, 41, 786, 1087, 1327, 2202
MaeI CTAG 8 cut(s) 47, 197, 566, 1275, 1739, 1811, 2243, 2573
MaeII ACGT 6 cut(s) 640, 792, 948, 1074, 1675, 2465
MaeIII GTNAC 8 cut(s) 270, 357, 694, 1030, 1585, 1888, 2048, 2591
MbiI CCGCTC 1 cut(s) 1975
MfeI CAATTG 1 cut(s) 2344
MflI RGATCY 3 cut(s) 922, 1156, 2455
MhlI GDGCHC 3 cut(s) 1506, 1640, 2423
MlyI GAGTC 1 cut(s) 1114
MmeI TCCRAC 2 cut(s) 607, 1195
Mph1103I ATGCAT 1 cut(s) 1843
MroXI GAANNNNTTC 3 cut(s) 227, 1158, 1731
MseI TTAA 5 cut(s) 582, 990, 1293, 2267, 2358
MslI CAYNNNNRTG 3 cut(s) 1454, 1774, 2379
MspA1I CMGCKG 1 cut(s) 1913
MspR9I CCNGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
MunI CAATTG 1 cut(s) 2344
Mva1269I GAATGC 2 cut(s) 2096, 2433
MvaI CCWGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
MvnI CGCG 1 cut(s) 1782
MwoI GCNNNNNNNGC 5 cut(s) 23, 26, 35, 2437, 2587
NlaIII CATG 7 cut(s) 1272, 1381, 1485, 1598, 2047, 2056, 2413
NlaIV GGNNCC 5 cut(s) 282, 369, 847, 1638, 2077
NmuCI GTSAC 5 cut(s) 694, 1030, 1585, 1888, 2591
NsiI ATGCAT 1 cut(s) 1843
NspV TTCGAA 1 cut(s) 1725
OliI CACNNNNGTG 1 cut(s) 2379
PaeR7I CTCGAG 1 cut(s) 2422
PaqCI CACCTGC 1 cut(s) 355
PasI CCCWGGG 1 cut(s) 1342
PctI GAATGC 2 cut(s) 2096, 2433
PdmI GAANNNNTTC 3 cut(s) 227, 1158, 1731
PfeI GAWTC 5 cut(s) 335, 971, 1001, 1411, 2444
PflMI CCANNNNNTGG 2 cut(s) 713, 1698
PfoI TCCNGGA 1 cut(s) 939
PkrI GCNGC 9 cut(s) 19, 28, 31, 60, 894, 1465, 2295, 2393, 2439
PleI GAGTC 1 cut(s) 1113
PpsI GAGTC 1 cut(s) 1113
Ppu21I YACGTR 2 cut(s) 1075, 1676
PpuMI RGGWCCY 1 cut(s) 2271
PshAI GACNNNNGTC 1 cut(s) 2163
PsiI TTATAA 2 cut(s) 404, 1667
Psp124BI GAGCTC 1 cut(s) 1506
Psp1406I AACGTT 2 cut(s) 948, 2465
Psp5II RGGWCCY 1 cut(s) 2271
Psp6I CCWGG 7 cut(s) 166, 706, 939, 955, 978, 1051, 1341
PspFI CCCAGC 1 cut(s) 1936
PspGI CCWGG 7 cut(s) 166, 706, 939, 955, 978, 1051, 1341
PspN4I GGNNCC 5 cut(s) 282, 369, 847, 1638, 2077
PspOMI GGGCCC 1 cut(s) 1636
PspPI GGNCC 5 cut(s) 937, 1381, 1636, 1637, 2271
PspPPI RGGWCCY 1 cut(s) 2271
PstI CTGCAG 1 cut(s) 366
PstNI CAGNNNCTG 1 cut(s) 713
PsuI RGATCY 3 cut(s) 922, 1156, 2455
PvuII CAGCTG 1 cut(s) 1913
RsaI GTAC 3 cut(s) 293, 603, 847
RsaNI GTAC 3 cut(s) 292, 602, 846
RseI CAYNNNNRTG 3 cut(s) 1454, 1774, 2379
SacI GAGCTC 1 cut(s) 1506
SalI GTCGAC 1 cut(s) 788
SaqAI TTAA 5 cut(s) 582, 990, 1293, 2267, 2358
SatI GCNGC 9 cut(s) 18, 27, 30, 59, 893, 1464, 2294, 2392, 2438
Sau96I GGNCC 5 cut(s) 937, 1381, 1636, 1637, 2271
SchI GAGTC 1 cut(s) 1114
ScrFI CCNGG 7 cut(s) 168, 708, 941, 957, 980, 1053, 1343
SduI GDGCHC 3 cut(s) 1506, 1640, 2423
SfaNI GCATC 6 cut(s) 29, 41, 786, 1087, 1327, 2202
SfcI CTRYAG 4 cut(s) 39, 362, 2024, 2350
Sfr274I CTCGAG 1 cut(s) 2422
SfuI TTCGAA 1 cut(s) 1725
SinI GGWCC 3 cut(s) 937, 1381, 2271
SlaI CTCGAG 1 cut(s) 2422
SmiMI CAYNNNNRTG 3 cut(s) 1454, 1774, 2379
SmlI CTYRAG 5 cut(s) 131, 533, 668, 1398, 2422
SmoI CTYRAG 5 cut(s) 131, 533, 668, 1398, 2422
SsiI CCGC 5 cut(s) 611, 1278, 1466, 1975, 2552
SspI AATATT 1 cut(s) 1240
SspMI CTAG 8 cut(s) 47, 197, 566, 1275, 1739, 1811, 2243, 2573
SstI GAGCTC 1 cut(s) 1506
StyD4I CCNGG 7 cut(s) 166, 706, 939, 955, 978, 1051, 1341
TaaI ACNGT 3 cut(s) 160, 625, 2204
TaiI ACGT 6 cut(s) 643, 795, 951, 1077, 1678, 2468
TaqI TCGA 8 cut(s) 102, 183, 243, 330, 417, 789, 1725, 2423
TfiI GAWTC 5 cut(s) 335, 971, 1001, 1411, 2444
Tru1I TTAA 5 cut(s) 582, 990, 1293, 2267, 2358
Tru9I TTAA 5 cut(s) 582, 990, 1293, 2267, 2358
TscAI CASTG 6 cut(s) 165, 703, 817, 1203, 2140, 2423
TseFI GTSAC 5 cut(s) 694, 1030, 1585, 1888, 2591
TseI GCWGC 9 cut(s) 17, 26, 29, 58, 892, 1463, 2293, 2391, 2437
Tsp45I GTSAC 5 cut(s) 694, 1030, 1585, 1888, 2591
TspDTI ATGAA 8 cut(s) 348, 663, 1366, 1380, 1470, 1935, 2032, 2502
TspGWI ACGGA 2 cut(s) 428, 1103
TspRI CASTG 6 cut(s) 165, 703, 817, 1203, 2140, 2423
Van91I CCANNNNNTGG 2 cut(s) 713, 1698
VpaK11BI GGWCC 3 cut(s) 937, 1381, 2271
XagI CCTNNNNNAGG 2 cut(s) 1364, 1513
XapI RAATTY 4 cut(s) 767, 1819, 1850, 2084
XbaI TCTAGA 1 cut(s) 196
XhoI CTCGAG 1 cut(s) 2422
XmiI GTMKAC 1 cut(s) 789
XmnI GAANNNNTTC 3 cut(s) 227, 1158, 1731
XspI CTAG 8 cut(s) 47, 197, 566, 1275, 1739, 1811, 2243, 2573
Zsp2I ATGCAT 1 cut(s) 1843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.