Rorug04G0431000

Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0005034
Physical Location & Seq
Reverse (-)
58979433 .. 58982248
2816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0431000.1

Sequence Viewer

Length: 1896 bp
ATGCAGCAGCACAGAGAACTCAGCCTCGTGACTCTTCTCTCTCTGTTCTCTATCTTCTTCTCTCTCAATGTAGCTACGGCCAGCGCCGGTGGGAAATCCGTGGATGAAAACCCATTTTCGCCCAAGGCCTATCTGACCCGTTACTGGAACAAGGAGGTCCGAAACGACGCCGTTGGACCGTCGTTTCTGCTCTCCAAAGCCTCGCCATTGACTGCGGTGCAGTCCGCTAGTTTCACAAAGCTTGCTTCCCAGAATGCCCTCCAGACCAAGCTACCGGAGTTCTGCTCCGCCGCCAAGCTCCTCTGCTTCCCCGATTTGGGGCAGAGTCTGGAGAAGCACGAAAGAGACGTGAGTTTTACCGGCTACTCAGAACGGAATTTCACAAACTACGGCACGGATCGGCTCGCCGGAGCCGACAGCTTCAAGAACTACTCGCTCGGCGAGAACTTGCCTATAGACTCATTCCGCCGCTACAGCCGCGACTCGGTGAACCACAAGGACAAGTTCAACAACTACGCCGCCGACGGCAACGTCGTCGACCAGAACTTCAACAGCTACGCCGCCGGCGCCACCTCCGGGACCGGCGATTTCAAGAGGTACGCCGACTCCACCAACGTCCCCAACCTCCGATTCACCTCCTACTCCGACGACTCCAACGGCCGGGCCCAGTCCTTCACCGGCTACAGCGAGAACGCCAACGCCGGCCAGCAGAGTTTCACTAGCTACTCCAAAAACGGCAATGGGGCCCCGAACGCGTTCACGGGCTACGGAACCAGCTCCAATGTGGCCGGGTCGGACTTCACCGGGTACAGCCAATCCGGAAACGCACCAAACGACACGTTCACAAACTACGGCAACGACGAGAACAATCCTACCGAGCGGTTCAGGAGCTACGGCGACGGCGGCAATGGCGGGTCGGAGAAGTTCTCGAACTACAGAGACCGGGCCAATGTGGGTGAGAGCTCGTTCCAGTCGTACGCCAAGAACTCCAACTCCGAGAAGGTCAATTTCGTCAATTACGGGCAGAGTTTCAACAACGGGTCGGATTCTTTCACCGGGTACGCTAAAGCCTCCAAGGGCGGGTCGACCGGGTTCAAGATCTACGGCGTCAACAACACTTTCAAGGATTACAAGGACAAAAAGACGACGAAGTTCACGGAATACTCGGTGGGTGAAAAGTCCAGTTTAGCCTCGAAAATGGCCGCCAGTGGCAGTTTGGTGAAAAGGTGGGTGGAGCCGGGCAAATTCTTCAGGGAGTCTATGATCAAAAAAGGAACTGTGATGCCATTTCCCGACATTAAAGATAAAATGCCCGAAAGGTCGTTTTTGCCCCGGACCATCTCCTCCAAATTACCTTTTGCCACCGCCAAAGTCTCCGAGCTGAAGAGGATTTTCCACGCCGAGGACAACTCCACCATGGAGAAGATCATCACCGACGCCCTGCAGGAATGCGAGAGGGCACCCAGCAAAGGCGAGACGAAACGGTGCGTCGGCTCGGCCGAGGACATGATCGATTTCGCGACGTCCGTCCTGGGCCGAAACGTCGTCGTTCGCACCACGGACAACGTCAATGGTTCGAAGGGCGACGTGGTGGTCGGGGCGGTTAAAGGAATCAACGGCGGGAAAGTCACGCAGTCCGTGTCTTGCCACCAGAGCTTGTTCCCTTACCTACTCTATTACTGCCACTCGGTTCCGAAAGTCCGGGTTTACGAAGCGGATCTACTGGACCCGACTTCGAAGGCCAAGATCAACCGCGGCGTTGCCATCTGTCACTTGGACACGTCTGCTTGGAGCCCCACTCATGGATCCTTTGCGGCTCTTGGCTCGGGTCCGGGTCGGATCGAGGTCTGCCACTGGATCTTCCAGAATGACTTGACTTGGACCATTGCTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Fasciclin

Protein Analysis

631

Amino Acids

68.96

Weight (kDa)

8.78

Isoelectric Point (pI)

32.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BURP PF03181 416 - 628 4.5e-67 BURP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 530, 1592
AatII GACGTC 1 cut(s) 1526
AccB1I GGYRCC 2 cut(s) 566, 1459
AccBSI CCGCTC 1 cut(s) 880
AccI GTMKAC 2 cut(s) 537, 1085
AccII CGCG 4 cut(s) 480, 755, 1520, 1755
AccIII TCCGGA 1 cut(s) 818
AclWI GGATC 6 cut(s) 405, 1725, 1800, 1813, 1847, 1865
AcoI YGGCCR 6 cut(s) 78, 658, 703, 786, 1200, 1497
AcsI RAATTY 2 cut(s) 376, 1244
AcuI CTGAAG 2 cut(s) 1234, 1403
AcyI GRCGYC 5 cut(s) 168, 567, 1107, 1437, 1523
AfaI GTAC 4 cut(s) 599, 809, 977, 1061
AflIII ACRYGT 3 cut(s) 753, 837, 1779
AgsI TTSAA 7 cut(s) 424, 508, 550, 592, 1033, 1096, 1123
AjiI CACGTC 3 cut(s) 349, 1588, 1782
AjnI CCWGG 1 cut(s) 1530
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AloI GAACNNNNNNTCC 2 cut(s) 977, 1009
Alw21I GWGCWC 1 cut(s) 965
Alw26I GTCTC 4 cut(s) 339, 933, 1378, 1469
AlwI GGATC 6 cut(s) 405, 1725, 1800, 1813, 1847, 1865
AlwNI CAGNNNCTG 1 cut(s) 328
Ama87I CYCGRG 1 cut(s) 1825
Aor13HI TCCGGA 1 cut(s) 818
ApaI GGGCCC 2 cut(s) 667, 748
ApeKI GCWGC 2 cut(s) 4, 7
ApoI RAATTY 2 cut(s) 376, 1244
Asp700I GAANNNNTTC 1 cut(s) 755
AspLEI GCGC 2 cut(s) 86, 569
AsuHPI GGTGA 9 cut(s) 499, 625, 667, 793, 968, 1045, 1184, 1231, 1423
AsuII TTCGAA 2 cut(s) 1577, 1736
AvaI CYCGRG 1 cut(s) 1825
AvaII GGWCC 7 cut(s) 157, 176, 579, 1335, 1726, 1829, 1881
BaeGI GKGCMC 3 cut(s) 667, 748, 1462
BamHI GGATCC 1 cut(s) 1805
BanI GGYRCC 2 cut(s) 566, 1459
BanII GRGCYC 4 cut(s) 667, 748, 965, 1796
BarI GAAGNNNNNNTAC 2 cut(s) 1704, 1736
BauI CACGAG 1 cut(s) 26
Bbv12I GWGCWC 1 cut(s) 965
BbvI GCAGC 2 cut(s) 16, 19
BccI CCATC 2 cut(s) 1346, 1772
BcgI CGANNNNNNTGC 2 cut(s) 517, 551
BciT130I CCWGG 1 cut(s) 1532
BclI TGATCA 1 cut(s) 1263
BcoDI GTCTC 4 cut(s) 339, 933, 1378, 1469
BfaI CTAG 2 cut(s) 228, 720
BfmI CTRYAG 5 cut(s) 453, 472, 682, 934, 1442
BfoI RGCGCY 2 cut(s) 87, 570
BglII AGATCT 1 cut(s) 1098
Bme18I GGWCC 7 cut(s) 157, 176, 579, 1335, 1726, 1829, 1881
BmeT110I CYCGRG 1 cut(s) 1825
BmgBI CACGTC 3 cut(s) 349, 1588, 1782
BmrI ACTGGG 1 cut(s) 661
BmsI GCATC 1 cut(s) 1272
BmuI ACTGGG 1 cut(s) 661
BoxI GACNNNNGTC 1 cut(s) 1526
BplI GAGNNNNNCTC 8 cut(s) 269, 301, 911, 943, 1394, 1426, 1783, 1815
BpmI CTGGAG 2 cut(s) 245, 350
Bpu14I TTCGAA 2 cut(s) 1577, 1736
Bsa29I ATCGAT 1 cut(s) 1512
BsaHI GRCGYC 5 cut(s) 168, 567, 1107, 1437, 1523
BsaI GGTCTC 1 cut(s) 933
BsaWI WCCGGW 2 cut(s) 274, 818
BsaXI ACNNNNNCTCC 4 cut(s) 590, 620, 977, 1007
Bse118I RCCGGY 6 cut(s) 86, 359, 563, 581, 677, 701
Bse1I ACTGG 7 cut(s) 149, 667, 970, 1182, 1206, 1728, 1859
Bse3DI GCAATG 3 cut(s) 745, 913, 1884
BseAI TCCGGA 1 cut(s) 818
BseBI CCWGG 1 cut(s) 1532
BseCI ATCGAT 1 cut(s) 1512
BseGI GGATG 1 cut(s) 109
BseMI GCAATG 3 cut(s) 745, 913, 1884
BseMII CTCAG 2 cut(s) 34, 381
BseNI ACTGG 7 cut(s) 149, 667, 970, 1182, 1206, 1728, 1859
BseRI GAGGAG 2 cut(s) 290, 1333
BseSI GKGCMC 3 cut(s) 667, 748, 1462
BseX3I CGGCCG 2 cut(s) 658, 1497
BseXI GCAGC 2 cut(s) 16, 19
BseYI CCCAGC 1 cut(s) 1463
BsgI GTGCAG 1 cut(s) 239
Bsh1236I CGCG 4 cut(s) 480, 755, 1520, 1755
Bsh1285I CGRYCG 3 cut(s) 661, 1089, 1500
BshNI GGYRCC 2 cut(s) 566, 1459
BshVI ATCGAT 1 cut(s) 1512
BsiEI CGRYCG 3 cut(s) 661, 1089, 1500
BsiHKAI GWGCWC 1 cut(s) 965
BsiHKCI CYCGRG 1 cut(s) 1825
BsiWI CGTACG 1 cut(s) 975
BslFI GGGAC 2 cut(s) 592, 602
BsmAI GTCTC 4 cut(s) 339, 933, 1378, 1469
BsmBI CGTCTC 2 cut(s) 339, 1469
BsmFI GGGAC 2 cut(s) 592, 602
BsmI GAATGC 2 cut(s) 259, 1454
Bso31I GGTCTC 1 cut(s) 933
BsoBI CYCGRG 1 cut(s) 1825
Bsp119I TTCGAA 2 cut(s) 1577, 1736
Bsp120I GGGCCC 2 cut(s) 663, 744
Bsp1286I GDGCHC 5 cut(s) 667, 748, 965, 1462, 1796
Bsp13I TCCGGA 1 cut(s) 818
Bsp19I CCATGG 1 cut(s) 1416
Bsp68I TCGCGA 1 cut(s) 1520
BspCNI CTCAG 2 cut(s) 33, 380
BspDI ATCGAT 1 cut(s) 1512
BspEI TCCGGA 1 cut(s) 818
BspFNI CGCG 4 cut(s) 480, 755, 1520, 1755
BspMAI CTGCAG 1 cut(s) 1446
BspPI GGATC 6 cut(s) 405, 1725, 1800, 1813, 1847, 1865
BspT104I TTCGAA 2 cut(s) 1577, 1736
BspT107I GGYRCC 2 cut(s) 566, 1459
BspTNI GGTCTC 1 cut(s) 933
BsrBI CCGCTC 1 cut(s) 880
BsrDI GCAATG 3 cut(s) 745, 913, 1884
BsrFI RCCGGY 6 cut(s) 86, 359, 563, 581, 677, 701
BsrI ACTGG 7 cut(s) 149, 667, 970, 1182, 1206, 1728, 1859
BssAI RCCGGY 6 cut(s) 86, 359, 563, 581, 677, 701
BssNI GRCGYC 5 cut(s) 168, 567, 1107, 1437, 1523
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 3 cut(s) 123, 1074, 1416
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 1 cut(s) 1532
Bst4CI ACNGT 3 cut(s) 180, 1279, 1485
Bst6I CTCTTC 2 cut(s) 39, 1379
BstACI GRCGYC 5 cut(s) 168, 567, 1107, 1437, 1523
BstBI TTCGAA 2 cut(s) 1577, 1736
BstC8I GCNNGC 6 cut(s) 82, 243, 405, 565, 703, 707
BstDEI CTNAG 2 cut(s) 20, 367
BstDSI CCRYGG 4 cut(s) 99, 1416, 1557, 1753
BstF5I GGATG 1 cut(s) 109
BstFNI CGCG 4 cut(s) 480, 755, 1520, 1755
BstH2I RGCGCY 2 cut(s) 87, 570
BstHHI GCGC 2 cut(s) 86, 569
BstMAI GTCTC 4 cut(s) 339, 933, 1378, 1469
BstMCI CGRYCG 3 cut(s) 661, 1089, 1500
BstMWI GCNNNNNNNGC 7 cut(s) 474, 477, 566, 752, 903, 909, 1653
BstNI CCWGG 1 cut(s) 1532
BstPAI GACNNNNGTC 1 cut(s) 1526
BstSFI CTRYAG 5 cut(s) 453, 472, 682, 934, 1442
BstSLI GKGCMC 3 cut(s) 667, 748, 1462
BstUI CGCG 4 cut(s) 480, 755, 1520, 1755
BstV1I GCAGC 2 cut(s) 16, 19
BstX2I RGATCY 4 cut(s) 1098, 1717, 1805, 1857
BstYI RGATCY 4 cut(s) 1098, 1717, 1805, 1857
BstZI CGGCCG 2 cut(s) 658, 1497
Bsu15I ATCGAT 1 cut(s) 1512
BsuTUI ATCGAT 1 cut(s) 1512
BtgI CCRYGG 4 cut(s) 99, 1416, 1557, 1753
BtrI CACGTC 3 cut(s) 349, 1588, 1782
BtsCI GGATG 1 cut(s) 109
BtsIMutI CAGTG 2 cut(s) 1213, 1852
BtuMI TCGCGA 1 cut(s) 1520
Cac8I GCNNGC 6 cut(s) 82, 243, 405, 565, 703, 707
CaiI CAGNNNCTG 1 cut(s) 328
CfoI GCGC 2 cut(s) 86, 569
Cfr10I RCCGGY 6 cut(s) 86, 359, 563, 581, 677, 701
Cfr42I CCGCGG 1 cut(s) 1756
ClaI ATCGAT 1 cut(s) 1512
CseI GACGC 4 cut(s) 176, 1096, 1445, 1477
Csp6I GTAC 4 cut(s) 598, 808, 976, 1060
CviAII CATG 3 cut(s) 1417, 1507, 1802
CviQI GTAC 4 cut(s) 598, 808, 976, 1060
DdeI CTNAG 2 cut(s) 20, 367
DinI GGCGCC 1 cut(s) 568
DrdI GACNNNNNNGTC 2 cut(s) 530, 1592
DseDI GACNNNNNNGTC 2 cut(s) 530, 1592
EaeI YGGCCR 6 cut(s) 78, 658, 703, 786, 1200, 1497
EagI CGGCCG 2 cut(s) 658, 1497
Eam1104I CTCTTC 2 cut(s) 39, 1379
EarI CTCTTC 2 cut(s) 39, 1379
EciI GGCGGA 2 cut(s) 277, 455
Ecl136II GAGCTC 1 cut(s) 963
EclXI CGGCCG 2 cut(s) 658, 1497
Eco130I CCWWGG 3 cut(s) 123, 1074, 1416
Eco147I AGGCCT 1 cut(s) 128
Eco24I GRGCYC 4 cut(s) 667, 748, 965, 1796
Eco31I GGTCTC 1 cut(s) 933
Eco47I GGWCC 7 cut(s) 157, 176, 579, 1335, 1726, 1829, 1881
Eco52I CGGCCG 2 cut(s) 658, 1497
Eco53kI GAGCTC 1 cut(s) 963
Eco57I CTGAAG 2 cut(s) 1234, 1403
Eco88I CYCGRG 1 cut(s) 1825
EcoICRI GAGCTC 1 cut(s) 963
EcoO109I RGGNCCY 2 cut(s) 744, 745
EcoRII CCWGG 1 cut(s) 1530
EcoT14I CCWWGG 3 cut(s) 123, 1074, 1416
EcoT38I GRGCYC 4 cut(s) 667, 748, 965, 1796
EgeI GGCGCC 1 cut(s) 568
EheI GGCGCC 1 cut(s) 568
ErhI CCWWGG 3 cut(s) 123, 1074, 1416
Esp3I CGTCTC 2 cut(s) 339, 1469
FaeI CATG 3 cut(s) 1420, 1510, 1805
FaiI YATR 5 cut(s) 455, 1262, 1418, 1508, 1803
FaqI GGGAC 2 cut(s) 592, 602
FatI CATG 3 cut(s) 1416, 1506, 1801
FauI CCCGC 3 cut(s) 905, 1073, 1613
FbaI TGATCA 1 cut(s) 1263
FblI GTMKAC 2 cut(s) 537, 1085
FokI GGATG 1 cut(s) 116
FriOI GRGCYC 4 cut(s) 667, 748, 965, 1796
FspBI CTAG 2 cut(s) 228, 720
GlaI GCGC 2 cut(s) 85, 568
GsaI CCCAGC 1 cut(s) 1467
GsuI CTGGAG 2 cut(s) 245, 350
HaeII RGCGCY 2 cut(s) 87, 570
HgaI GACGC 4 cut(s) 176, 1096, 1445, 1477
HhaI GCGC 2 cut(s) 86, 569
Hin1I GRCGYC 5 cut(s) 168, 567, 1107, 1437, 1523
Hin1II CATG 3 cut(s) 1420, 1510, 1805
Hin6I GCGC 2 cut(s) 84, 567
HinP1I GCGC 2 cut(s) 84, 567
HincII GTYRAC 3 cut(s) 538, 1086, 1111
HindII GTYRAC 3 cut(s) 538, 1086, 1111
HindIII AAGCTT 1 cut(s) 239
HphI GGTGA 9 cut(s) 499, 625, 667, 793, 968, 1045, 1184, 1231, 1423
Hpy166II GTNNAC 8 cut(s) 490, 538, 759, 843, 1086, 1111, 1155, 1708
Hpy8I GTNNAC 8 cut(s) 490, 538, 759, 843, 1086, 1111, 1155, 1708
HpyAV CCTTC 4 cut(s) 682, 994, 1573, 1732
HpyCH4III ACNGT 3 cut(s) 180, 1279, 1485
HpyCH4IV ACGT 9 cut(s) 348, 531, 615, 839, 1523, 1542, 1566, 1587, 1781
HpyCH4V TGCA 3 cut(s) 4, 220, 1444
HpyF10VI GCNNNNNNNGC 7 cut(s) 474, 477, 566, 752, 903, 909, 1653
HpyF3I CTNAG 2 cut(s) 20, 367
HpySE526I ACGT 9 cut(s) 348, 531, 615, 839, 1523, 1542, 1566, 1587, 1781
Hsp92I GRCGYC 5 cut(s) 168, 567, 1107, 1437, 1523
Hsp92II CATG 3 cut(s) 1420, 1510, 1805
HspAI GCGC 2 cut(s) 84, 567
KasI GGCGCC 1 cut(s) 566
Kpn2I TCCGGA 1 cut(s) 818
KroI GCCGGC 2 cut(s) 563, 701
KroNI GCCGGC 2 cut(s) 565, 703
Ksp22I TGATCA 1 cut(s) 1263
KspI CCGCGG 1 cut(s) 1756
LmnI GCTCC 7 cut(s) 290, 303, 410, 782, 888, 1234, 1791
Lsp1109I GCAGC 2 cut(s) 16, 19
LweI GCATC 1 cut(s) 1272
MaeI CTAG 2 cut(s) 228, 720
MaeII ACGT 9 cut(s) 348, 531, 615, 839, 1523, 1542, 1566, 1587, 1781
MaeIII GTNAC 4 cut(s) 28, 140, 1627, 1769
MbiI CCGCTC 1 cut(s) 880
MboII GAAGA 7 cut(s) 26, 46, 49, 1240, 1396, 1435, 1852
MflI RGATCY 4 cut(s) 1098, 1717, 1805, 1857
MhlI GDGCHC 5 cut(s) 667, 748, 965, 1462, 1796
MluCI AATT 5 cut(s) 376, 1006, 1015, 1244, 1349
MluI ACGCGT 1 cut(s) 753
Mly113I GGCGCC 1 cut(s) 567
MlyI GAGTC 7 cut(s) 25, 334, 452, 476, 599, 644, 1265
MmeI TCCRAC 8 cut(s) 154, 669, 678, 774, 897, 1014, 1023, 1817
MreI CGCCGGCG 1 cut(s) 563
MroI TCCGGA 1 cut(s) 818
MroNI GCCGGC 2 cut(s) 563, 701
MroXI GAANNNNTTC 1 cut(s) 755
MseI TTAA 2 cut(s) 1299, 1605
MspA1I CMGCKG 1 cut(s) 1755
Mva1269I GAATGC 2 cut(s) 259, 1454
MvaI CCWGG 1 cut(s) 1532
MvnI CGCG 4 cut(s) 480, 755, 1520, 1755
MwoI GCNNNNNNNGC 7 cut(s) 474, 477, 566, 752, 903, 909, 1653
NaeI GCCGGC 2 cut(s) 565, 703
NarI GGCGCC 1 cut(s) 567
NcoI CCATGG 1 cut(s) 1416
NgoMIV GCCGGC 2 cut(s) 563, 701
NlaIII CATG 3 cut(s) 1420, 1510, 1805
NmeAIII GCCGAG 4 cut(s) 417, 1426, 1475, 1525
NmuCI GTSAC 3 cut(s) 28, 1627, 1769
NruI TCGCGA 1 cut(s) 1520
NspV TTCGAA 2 cut(s) 1577, 1736
PceI AGGCCT 1 cut(s) 128
PcsI WCGNNNNNNNCGW 8 cut(s) 345, 411, 531, 831, 858, 971, 1497, 1524
PctI GAATGC 2 cut(s) 259, 1454
PdiI GCCGGC 2 cut(s) 565, 703
PdmI GAANNNNTTC 1 cut(s) 755
PfeI GAWTC 3 cut(s) 630, 1046, 1611
Pfl23II CGTACG 1 cut(s) 975
PflFI GACNNNGTC 1 cut(s) 1565
PfoI TCCNGGA 1 cut(s) 575
PleI GAGTC 7 cut(s) 25, 333, 452, 476, 599, 644, 1264
PluTI GGCGCC 1 cut(s) 570
PpsI GAGTC 7 cut(s) 25, 333, 452, 476, 599, 644, 1264
PshAI GACNNNNGTC 1 cut(s) 1526
Psp124BI GAGCTC 1 cut(s) 965
Psp6I CCWGG 1 cut(s) 1530
PspFI CCCAGC 1 cut(s) 1463
PspGI CCWGG 1 cut(s) 1530
PspLI CGTACG 1 cut(s) 975
PspOMI GGGCCC 2 cut(s) 663, 744
PstI CTGCAG 1 cut(s) 1446
PstNI CAGNNNCTG 1 cut(s) 328
PsuI RGATCY 4 cut(s) 1098, 1717, 1805, 1857
PsyI GACNNNGTC 1 cut(s) 1565
RruI TCGCGA 1 cut(s) 1520
RsaI GTAC 4 cut(s) 599, 809, 977, 1061
RsaNI GTAC 4 cut(s) 598, 808, 976, 1060
SacI GAGCTC 1 cut(s) 965
SacII CCGCGG 1 cut(s) 1756
SalI GTCGAC 2 cut(s) 536, 1084
SaqAI TTAA 2 cut(s) 1299, 1605
SbfI CCTGCAGG 1 cut(s) 1446
SchI GAGTC 7 cut(s) 25, 334, 452, 476, 599, 644, 1265
SdaI CCTGCAGG 1 cut(s) 1446
SduI GDGCHC 5 cut(s) 667, 748, 965, 1462, 1796
SfaNI GCATC 1 cut(s) 1272
SfcI CTRYAG 5 cut(s) 453, 472, 682, 934, 1442
SfoI GGCGCC 1 cut(s) 568
Sfr303I CCGCGG 1 cut(s) 1756
SfuI TTCGAA 2 cut(s) 1577, 1736
SgrAI CRCCGGYG 2 cut(s) 86, 563
SgrBI CCGCGG 1 cut(s) 1756
SinI GGWCC 7 cut(s) 157, 176, 579, 1335, 1726, 1829, 1881
Sse8387I CCTGCAGG 1 cut(s) 1446
Sse9I AATT 5 cut(s) 376, 1006, 1015, 1244, 1349
SseBI AGGCCT 1 cut(s) 128
SspDI GGCGCC 1 cut(s) 566
SspMI CTAG 2 cut(s) 228, 720
SstI GAGCTC 1 cut(s) 965
StuI AGGCCT 1 cut(s) 128
StyI CCWWGG 3 cut(s) 123, 1074, 1416
TaaI ACNGT 3 cut(s) 180, 1279, 1485
TaiI ACGT 9 cut(s) 351, 534, 618, 842, 1526, 1545, 1569, 1590, 1784
TaqI TCGA 8 cut(s) 537, 929, 1085, 1193, 1512, 1577, 1736, 1842
TasI AATT 5 cut(s) 376, 1006, 1015, 1244, 1349
TauI GCSGC 9 cut(s) 293, 471, 480, 521, 563, 906, 1205, 1758, 1817
TfiI GAWTC 3 cut(s) 630, 1046, 1611
Tru1I TTAA 2 cut(s) 1299, 1605
Tru9I TTAA 2 cut(s) 1299, 1605
TscAI CASTG 2 cut(s) 1213, 1859
TseFI GTSAC 3 cut(s) 28, 1627, 1769
TseI GCWGC 2 cut(s) 4, 7
Tsp45I GTSAC 3 cut(s) 28, 1627, 1769
TspDTI ATGAA 1 cut(s) 120
TspGWI ACGGA 8 cut(s) 88, 388, 410, 783, 1172, 1516, 1574, 1627
TspRI CASTG 2 cut(s) 1213, 1859
Tth111I GACNNNGTC 1 cut(s) 1565
VpaK11BI GGWCC 7 cut(s) 157, 176, 579, 1335, 1726, 1829, 1881
XapI RAATTY 2 cut(s) 376, 1244
XcmI CCANNNNNNNNNTGG 3 cut(s) 781, 1213, 1771
XmiI GTMKAC 2 cut(s) 537, 1085
XmnI GAANNNNTTC 1 cut(s) 755
XspI CTAG 2 cut(s) 228, 720
ZraI GACGTC 1 cut(s) 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.