Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0005034

Physical Location & Seq

Genomic Coordinates Reverse (-)

5934105 .. 5936059

Gene Structure 1955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG078900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGCTCCAATTCTCAAAGAATCTCCGTTCTTGATTCTTCTTCTCATCTTCACCGCCTCCGCCGTCTCCTCCTCCTCCGTCACCTCCTCCTCCGCTTCCACAGCCTCCTCCTCCGCCGCCGCCTCCGCCTCTACCTCACGGAGCTCGAAGGCCTTTCTTATCATGCCAAACGACGCCGTGGTACGCATGCAAGCCTCAGGGCCGCCGTCGCTTCCGGCCACGGGAAAAGTCGAGGACCTTGTCCCGCCAGAGATCGGCGGCTTCGGAAGTTTCTCTGCGGTGAATCCGATCCCTCTTGCCATCTTTGCCGGTTCTGGAAACCACGCCTTCTCCGGTCAGCCGTCGCCTGCATCTTCACTGCCGCCGTCTCCTCCGGCGACGCCGCAGCAACCGGAGGTTGCAGCGATCGGCTCCAGTGACCCGGGGATCTTGGAGAACATGATGGACGGCGCGAGTCCACTCTGGCTTCCTCCGATCGCGACGGTGTTTGTATATGAGAACGACGGCGTACCGGACCCGGACTCGTTCTTTTCTCCAGAACACGTGGTGCCTGAGCGACTCACCTTCGCCGACCTCCGCCTCTTGGAGACCAATTCACTCCTCCCGACGCTTCATCCTGGTAAATTTCTCACCATAACAAACAACTCCGAGGTGAATTTCACCGTGGACGACTCTCGTCTCAGTGTGCCAGACGCATACGTCACCCGAGAGCGCGTTGTCCATCGCGTGGCACAAGTTTCCCCGGCCAACGTCTCCGACTCCCAGTCCAAGAGCTTTTGGTACCCCATTCTTCAACCACTTGTCAAGTATGCTTTGGCCGTCATGGCTGCACTAGCTGTTTTATGGGGCGTTTATATGTGGTGCCCGAATTCGTTCAAATGCTTGGGATTCTTTGGTTTGCTTAAGCTCTTCGGCGGTAGCAGCACCAGTACCGGAGGTACCGGATTACAAGCAACGGCGAGAGTGGTCACAGAAGGGCTTGCTGGACTTATCAGCAACGTTACTGGCGCCATCACTGGTCGTGCAGCAGTCACTGTCAGCAACGACGGTGGAATCGTCGGAAGCGGCCCAATCGAAACCCCGGTGAGAGACAGCAGTCCTGGATTTCTAAGACGATTCCTCGGAGGCACTGCTGGCCTACTCGGAGCGCTAGTGGGAATAGGGAGGGTGGCTGGACAACCACGGCAGAACGAGGTGGAGCTGCAGTCACTAATAAGGCAACCCGATCCGCCAGAAAACGAGCAGAGCGAAGGCGAGCCTACGCCAGAAGCTGCTAACCAGCCTGCGCCAGAAGCTGCTAACCAGGCTGCTCCAGAAGCTGCTAACCAGGCTGCTCCAGAAGCTATCCAGCCGCTTGCTGCGCCACGGCCTTTGATTCCGTCAAGGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fasciclin

Protein Analysis

463

Amino Acids

47.95

Weight (kDa)

4.87

Isoelectric Point (pI)

56.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005034)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30800 AT4G12950 AT4G29980
fragaria_vesca	FvH4_1g24910 FvH4_3g11440 FvH4_3g19970 FvH4_5g18240 FvH4_5g21920 FvH4_6g29350
malus_domestica	MD00G1097400.v1.1
prunus_persica	Prupe.4G102300_v2.0.a1
pyrus_communis	pycom05g24700
rosa_laevigata	RLG00000031490 RLG00000032358
rosa_multiflora	Rmu_sc0017459.1_g000003
rosa_roxburghii	Rroxscaffold_1G00059350
rosa_rugosa	Rorug04G0431000 Rorug04G0432100 Rorug05G0042200
rosa_samantha	Rh4BG224100 Rh4CG235000 Rh4DG220900 Rh5BG055700 Rh5CG067100 Rh5CG067200 Rh5CG078900 Rh5DG054700 Rh5DG066900
rosa_wichuraiana	Rw4G019090 Rw5G011840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	698
Acc65I	GGTACC	2 cut(s)	780, 938
AccB1I	GGYRCC	5 cut(s)	547, 780, 861, 938, 1007
AccB7I	CCANNNNNTGG	1 cut(s)	727
AccII	CGCG	4 cut(s)	452, 479, 714, 726
AclI	AACGTT	1 cut(s)	999
AclWI	GGATC	3 cut(s)	283, 434, 1220
AcoI	YGGCCR	3 cut(s)	216, 744, 816
AcsI	RAATTY	3 cut(s)	623, 655, 868
AcvI	CACGTG	1 cut(s)	544
AcyI	GRCGYC	3 cut(s)	174, 380, 1008
AdeI	CACNNNGTG	1 cut(s)	547
AfaI	GTAC	5 cut(s)	183, 510, 782, 931, 940
AfeI	AGCGCT	1 cut(s)	1149
AfiI	CCNNNNNNNGG	4 cut(s)	221, 254, 583, 727
AflII	CTTAAG	1 cut(s)	902
AflIII	ACRYGT	1 cut(s)	541
AgsI	TTSAA	2 cut(s)	794, 877
AhdI	GACNNNNNGTC	1 cut(s)	763
AjnI	CCWGG	4 cut(s)	616, 1099, 1302, 1326
AluBI	AGCT	9 cut(s)	144, 774, 836, 907, 1201, 1271, 1295, 1319, 1343
AluI	AGCT	9 cut(s)	144, 774, 836, 907, 1201, 1271, 1295, 1319, 1343
Alw21I	GWGCWC	1 cut(s)	146
Alw26I	GTCTC	6 cut(s)	70, 372, 581, 683, 757, 1083
AlwI	GGATC	3 cut(s)	283, 434, 1220
AlwNI	CAGNNNCTG	4 cut(s)	1034, 1271, 1295, 1319
Ama87I	CYCGRG	2 cut(s)	421, 705
Aor51HI	AGCGCT	1 cut(s)	1149
AoxI	GGCC	8 cut(s)	150, 200, 216, 744, 816, 1066, 1135, 1367
ApoI	RAATTY	3 cut(s)	623, 655, 868
Asp700I	GAANNNNTTC	1 cut(s)	872
Asp718I	GGTACC	2 cut(s)	780, 938
AspLEI	GCGC	6 cut(s)	452, 714, 1010, 1150, 1288, 1363
AspS9I	GGNCC	4 cut(s)	200, 235, 514, 1067
AsuC2I	CCSGG	5 cut(s)	422, 423, 518, 743, 1082
AsuHPI	GGTGA	9 cut(s)	43, 73, 292, 553, 622, 652, 664, 694, 1096
AvaI	CYCGRG	2 cut(s)	421, 705
AvaII	GGWCC	2 cut(s)	235, 514
AxyI	CCTNAGG	1 cut(s)	196
BaeGI	GKGCMC	1 cut(s)	866
BanI	GGYRCC	5 cut(s)	547, 780, 861, 938, 1007
BanII	GRGCYC	1 cut(s)	146
BbrPI	CACGTG	1 cut(s)	544
Bbv12I	GWGCWC	1 cut(s)	146
BccI	CCATC	4 cut(s)	308, 436, 729, 1019
BciT130I	CCWGG	4 cut(s)	618, 1101, 1304, 1328
BcnI	CCSGG	5 cut(s)	422, 423, 518, 743, 1082
BcoDI	GTCTC	6 cut(s)	70, 372, 581, 683, 757, 1083
BfaI	CTAG	2 cut(s)	833, 1151
BfmI	CTRYAG	1 cut(s)	1202
BfoI	RGCGCY	2 cut(s)	1011, 1151
BfrI	CTTAAG	1 cut(s)	902
BglI	GCCNNNNNGGC	1 cut(s)	824
Bme1390I	CCNGG	9 cut(s)	422, 423, 518, 618, 743, 1082, 1101, 1304, 1328
Bme18I	GGWCC	2 cut(s)	235, 514
BmeRI	GACNNNNNGTC	1 cut(s)	763
BmeT110I	CYCGRG	2 cut(s)	421, 705
BmgT120I	GGNCC	4 cut(s)	200, 235, 514, 1067
BmiI	GGNNCC	8 cut(s)	6, 412, 516, 549, 782, 863, 940, 1009
BmrFI	CCNGG	9 cut(s)	422, 423, 518, 618, 743, 1082, 1101, 1304, 1328
BmrI	ACTGGG	1 cut(s)	757
BmsI	GCATC	1 cut(s)	359
BmuI	ACTGGG	1 cut(s)	757
BoxI	GACNNNNGTC	2 cut(s)	675, 1095
BpmI	CTGGAG	4 cut(s)	397, 519, 1296, 1320
Bpu10I	CCTNAGC	1 cut(s)	552
BpuMI	CCSGG	5 cut(s)	422, 423, 518, 743, 1082
BsaAI	YACGTR	1 cut(s)	544
BsaHI	GRCGYC	3 cut(s)	174, 380, 1008
BsaI	GGTCTC	1 cut(s)	581
BsaWI	WCCGGW	5 cut(s)	332, 391, 511, 932, 941
BsaXI	ACNNNNNCTCC	6 cut(s)	314, 344, 1137, 1167, 1190, 1220
Bsc4I	CCNNNNNNNGG	4 cut(s)	221, 254, 583, 727
Bse118I	RCCGGY	1 cut(s)	308
Bse1I	ACTGG	5 cut(s)	414, 763, 927, 1009, 1021
Bse21I	CCTNAGG	1 cut(s)	196
BseBI	CCWGG	4 cut(s)	618, 1101, 1304, 1328
BseGI	GGATG	2 cut(s)	613, 1392
BseLI	CCNNNNNNNGG	4 cut(s)	221, 254, 583, 727
BseMII	CTCAG	3 cut(s)	210, 543, 694
BseNI	ACTGG	5 cut(s)	414, 763, 927, 1009, 1021
BseRI	GAGGAG	9 cut(s)	58, 61, 64, 76, 79, 97, 100, 360, 590
BseSI	GKGCMC	1 cut(s)	866
BsgI	GTGCAG	2 cut(s)	813, 1044
Bsh1236I	CGCG	4 cut(s)	452, 479, 714, 726
Bsh1285I	CGRYCG	2 cut(s)	408, 477
BshFI	GGCC	8 cut(s)	152, 202, 218, 746, 818, 1068, 1137, 1369
BshNI	GGYRCC	5 cut(s)	547, 780, 861, 938, 1007
BsiEI	CGRYCG	2 cut(s)	408, 477
BsiHKAI	GWGCWC	1 cut(s)	146
BsiHKCI	CYCGRG	2 cut(s)	421, 705
BslFI	GGGAC	1 cut(s)	227
BslI	CCNNNNNNNGG	4 cut(s)	221, 254, 583, 727
BsmAI	GTCTC	6 cut(s)	70, 372, 581, 683, 757, 1083
BsmBI	CGTCTC	4 cut(s)	70, 372, 683, 757
BsmFI	GGGAC	1 cut(s)	227
BsnI	GGCC	8 cut(s)	152, 202, 218, 746, 818, 1068, 1137, 1369
Bso31I	GGTCTC	1 cut(s)	581
BsoBI	CYCGRG	2 cut(s)	421, 705
Bsp1286I	GDGCHC	2 cut(s)	146, 866
Bsp143I	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
Bsp68I	TCGCGA	1 cut(s)	479
BspANI	GGCC	8 cut(s)	152, 202, 218, 746, 818, 1068, 1137, 1369
BspCNI	CTCAG	3 cut(s)	209, 544, 693
BspFNI	CGCG	4 cut(s)	452, 479, 714, 726
BspLI	GGNNCC	8 cut(s)	6, 412, 516, 549, 782, 863, 940, 1009
BspMAI	CTGCAG	1 cut(s)	1206
BspPI	GGATC	3 cut(s)	283, 434, 1220
BspQI	GCTCTTC	1 cut(s)	914
BspT107I	GGYRCC	5 cut(s)	547, 780, 861, 938, 1007
BspTI	CTTAAG	1 cut(s)	902
BspTNI	GGTCTC	1 cut(s)	581
BsrFI	RCCGGY	1 cut(s)	308
BsrI	ACTGG	5 cut(s)	414, 763, 927, 1009, 1021
BssAI	RCCGGY	1 cut(s)	308
BssMI	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
BssNI	GRCGYC	3 cut(s)	174, 380, 1008
Bst2UI	CCWGG	4 cut(s)	618, 1101, 1304, 1328
Bst4CI	ACNGT	4 cut(s)	484, 664, 1036, 1049
Bst6I	CTCTTC	1 cut(s)	914
BstACI	GRCGYC	3 cut(s)	174, 380, 1008
BstAFI	CTTAAG	1 cut(s)	902
BstBAI	YACGTR	1 cut(s)	544
BstC8I	GCNNGC	8 cut(s)	188, 192, 348, 981, 1135, 1256, 1284, 1356
BstDEI	CTNAG	4 cut(s)	196, 552, 680, 1109
BstDSI	CCRYGG	5 cut(s)	177, 219, 663, 1181, 1364
BstF5I	GGATG	2 cut(s)	613, 1392
BstFNI	CGCG	4 cut(s)	452, 479, 714, 726
BstH2I	RGCGCY	2 cut(s)	1011, 1151
BstHHI	GCGC	6 cut(s)	452, 714, 1010, 1150, 1288, 1363
BstKTI	GATC	6 cut(s)	255, 291, 408, 429, 477, 1228
BstMAI	GTCTC	6 cut(s)	70, 372, 581, 683, 757, 1083
BstMBI	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
BstMCI	CGRYCG	2 cut(s)	408, 477
BstNI	CCWGG	4 cut(s)	618, 1101, 1304, 1328
BstNSI	RCATGY	1 cut(s)	190
BstPAI	GACNNNNGTC	2 cut(s)	675, 1095
BstSCI	CCNGG	9 cut(s)	420, 421, 516, 616, 741, 1080, 1099, 1302, 1326
BstSFI	CTRYAG	1 cut(s)	1202
BstSLI	GKGCMC	1 cut(s)	866
BstUI	CGCG	4 cut(s)	452, 479, 714, 726
BstX2I	RGATCY	1 cut(s)	426
BstYI	RGATCY	1 cut(s)	426
Bsu36I	CCTNAGG	1 cut(s)	196
BsuRI	GGCC	8 cut(s)	152, 202, 218, 746, 818, 1068, 1137, 1369
BtgI	CCRYGG	5 cut(s)	177, 219, 663, 1181, 1364
BtgZI	GCGATG	1 cut(s)	707
BtsCI	GGATG	2 cut(s)	613, 1392
BtsI	GCAGTG	2 cut(s)	356, 1128
BtsIMutI	CAGTG	6 cut(s)	356, 421, 688, 1014, 1032, 1128
BtuMI	TCGCGA	1 cut(s)	479
Cac8I	GCNNGC	8 cut(s)	188, 192, 348, 981, 1135, 1256, 1284, 1356
CaiI	CAGNNNCTG	4 cut(s)	1034, 1271, 1295, 1319
CfoI	GCGC	6 cut(s)	452, 714, 1010, 1150, 1288, 1363
Cfr10I	RCCGGY	1 cut(s)	308
Cfr13I	GGNCC	4 cut(s)	200, 235, 514, 1067
Cfr9I	CCCGGG	1 cut(s)	421
CseI	GACGC	4 cut(s)	182, 388, 616, 701
Csp6I	GTAC	5 cut(s)	182, 509, 781, 930, 939
CspCI	CAANNNNNGTGG	4 cut(s)	1030, 1065, 1353, 1388
CviAII	CATG	4 cut(s)	163, 187, 439, 823
CviQI	GTAC	5 cut(s)	182, 509, 781, 930, 939
DdeI	CTNAG	4 cut(s)	196, 552, 680, 1109
DinI	GGCGCC	1 cut(s)	1009
DpnI	GATC	6 cut(s)	254, 290, 407, 428, 476, 1227
DpnII	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
DraIII	CACNNNGTG	1 cut(s)	547
DrdI	GACNNNNNNGTC	1 cut(s)	698
DriI	GACNNNNNGTC	1 cut(s)	763
DseDI	GACNNNNNNGTC	1 cut(s)	698
EaeI	YGGCCR	3 cut(s)	216, 744, 816
Eam1104I	CTCTTC	1 cut(s)	914
Eam1105I	GACNNNNNGTC	1 cut(s)	763
EarI	CTCTTC	1 cut(s)	914
EciI	GGCGGA	5 cut(s)	49, 103, 115, 566, 1218
Ecl136II	GAGCTC	1 cut(s)	144
Eco147I	AGGCCT	1 cut(s)	152
Eco24I	GRGCYC	1 cut(s)	146
Eco31I	GGTCTC	1 cut(s)	581
Eco47I	GGWCC	2 cut(s)	235, 514
Eco47III	AGCGCT	1 cut(s)	1149
Eco53kI	GAGCTC	1 cut(s)	144
Eco72I	CACGTG	1 cut(s)	544
Eco81I	CCTNAGG	1 cut(s)	196
Eco88I	CYCGRG	2 cut(s)	421, 705
EcoICRI	GAGCTC	1 cut(s)	144
EcoO109I	RGGNCCY	1 cut(s)	235
EcoRI	GAATTC	1 cut(s)	868
EcoRII	CCWGG	4 cut(s)	616, 1099, 1302, 1326
EcoT38I	GRGCYC	1 cut(s)	146
EgeI	GGCGCC	1 cut(s)	1009
EheI	GGCGCC	1 cut(s)	1009
Esp3I	CGTCTC	4 cut(s)	70, 372, 683, 757
FaeI	CATG	4 cut(s)	166, 190, 442, 826
FaqI	GGGAC	1 cut(s)	227
FatI	CATG	4 cut(s)	162, 186, 438, 822
FauI	CCCGC	1 cut(s)	252
FokI	GGATG	1 cut(s)	600
FriOI	GRGCYC	1 cut(s)	146
FspBI	CTAG	2 cut(s)	833, 1151
GlaI	GCGC	6 cut(s)	451, 713, 1009, 1149, 1287, 1362
GsuI	CTGGAG	4 cut(s)	397, 519, 1296, 1320
HaeII	RGCGCY	2 cut(s)	1011, 1151
HaeIII	GGCC	8 cut(s)	152, 202, 218, 746, 818, 1068, 1137, 1369
HgaI	GACGC	4 cut(s)	182, 388, 616, 701
HhaI	GCGC	6 cut(s)	452, 714, 1010, 1150, 1288, 1363
Hin1I	GRCGYC	3 cut(s)	174, 380, 1008
Hin1II	CATG	4 cut(s)	166, 190, 442, 826
Hin6I	GCGC	6 cut(s)	450, 712, 1008, 1148, 1286, 1361
HinP1I	GCGC	6 cut(s)	450, 712, 1008, 1148, 1286, 1361
HphI	GGTGA	9 cut(s)	43, 73, 292, 553, 622, 652, 664, 694, 1096
Hpy166II	GTNNAC	2 cut(s)	458, 667
Hpy188I	TCNGA	8 cut(s)	266, 288, 474, 649, 757, 1061, 1124, 1145
Hpy188III	TCNNGA	7 cut(s)	31, 315, 478, 536, 604, 1313, 1337
Hpy8I	GTNNAC	2 cut(s)	458, 667
Hpy99I	CGWCG	9 cut(s)	176, 211, 346, 382, 484, 506, 610, 1049, 1061
HpyAV	CCTTC	5 cut(s)	142, 337, 574, 968, 1244
HpyCH4III	ACNGT	4 cut(s)	484, 664, 1036, 1049
HpyCH4IV	ACGT	4 cut(s)	543, 699, 750, 999
HpyCH4V	TGCA	6 cut(s)	190, 350, 401, 830, 1025, 1204
HpyF3I	CTNAG	4 cut(s)	196, 552, 680, 1109
HpySE526I	ACGT	4 cut(s)	543, 699, 750, 999
Hsp92I	GRCGYC	3 cut(s)	174, 380, 1008
Hsp92II	CATG	4 cut(s)	166, 190, 442, 826
HspAI	GCGC	6 cut(s)	450, 712, 1008, 1148, 1286, 1361
KasI	GGCGCC	1 cut(s)	1007
KpnI	GGTACC	2 cut(s)	784, 942
Kzo9I	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
LguI	GCTCTTC	1 cut(s)	914
LmnI	GCTCC	7 cut(s)	10, 141, 416, 1145, 1198, 1315, 1339
LweI	GCATC	1 cut(s)	359
MaeI	CTAG	2 cut(s)	833, 1151
MaeII	ACGT	4 cut(s)	543, 699, 750, 999
MaeIII	GTNAC	7 cut(s)	79, 416, 700, 967, 1000, 1030, 1206
MalI	GATC	6 cut(s)	254, 290, 407, 428, 476, 1227
MboI	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
MboII	GAAGA	6 cut(s)	29, 32, 40, 345, 782, 901
MflI	RGATCY	1 cut(s)	426
MhlI	GDGCHC	2 cut(s)	146, 866
MluCI	AATT	5 cut(s)	9, 592, 623, 655, 868
Mly113I	GGCGCC	1 cut(s)	1008
MlyI	GAGTC	5 cut(s)	463, 515, 552, 665, 752
MmeI	TCCRAC	2 cut(s)	780, 1039
MroXI	GAANNNNTTC	1 cut(s)	872
MseI	TTAA	1 cut(s)	903
MspCI	CTTAAG	1 cut(s)	902
MspR9I	CCNGG	9 cut(s)	422, 423, 518, 618, 743, 1082, 1101, 1304, 1328
MvaI	CCWGG	4 cut(s)	618, 1101, 1304, 1328
MvnI	CGCG	4 cut(s)	452, 479, 714, 726
NarI	GGCGCC	1 cut(s)	1008
NciI	CCSGG	5 cut(s)	422, 423, 518, 743, 1082
NdeII	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
NlaIII	CATG	4 cut(s)	166, 190, 442, 826
NlaIV	GGNNCC	8 cut(s)	6, 412, 516, 549, 782, 863, 940, 1009
NmuCI	GTSAC	6 cut(s)	79, 416, 700, 967, 1030, 1206
NruI	TCGCGA	1 cut(s)	479
NspI	RCATGY	1 cut(s)	190
PaeI	GCATGC	1 cut(s)	190
PceI	AGGCCT	1 cut(s)	152
PciSI	GCTCTTC	1 cut(s)	914
PcsI	WCGNNNNNNNCGW	2 cut(s)	1053, 1245
PdmI	GAANNNNTTC	1 cut(s)	872
PfeI	GAWTC	7 cut(s)	20, 34, 283, 888, 1053, 1116, 1375
PflFI	GACNNNGTC	1 cut(s)	239
PflMI	CCANNNNNTGG	1 cut(s)	727
PfoI	TCCNGGA	1 cut(s)	1099
Ple19I	CGATCG	2 cut(s)	408, 477
PleI	GAGTC	5 cut(s)	462, 515, 552, 665, 752
PluTI	GGCGCC	1 cut(s)	1011
PmaCI	CACGTG	1 cut(s)	544
PmlI	CACGTG	1 cut(s)	544
PpsI	GAGTC	5 cut(s)	462, 515, 552, 665, 752
Ppu21I	YACGTR	1 cut(s)	544
PpuMI	RGGWCCY	1 cut(s)	235
PshAI	GACNNNNGTC	2 cut(s)	675, 1095
Psp124BI	GAGCTC	1 cut(s)	146
Psp1406I	AACGTT	1 cut(s)	999
Psp5II	RGGWCCY	1 cut(s)	235
Psp6I	CCWGG	4 cut(s)	616, 1099, 1302, 1326
PspCI	CACGTG	1 cut(s)	544
PspGI	CCWGG	4 cut(s)	616, 1099, 1302, 1326
PspN4I	GGNNCC	8 cut(s)	6, 412, 516, 549, 782, 863, 940, 1009
PspPI	GGNCC	4 cut(s)	200, 235, 514, 1067
PspPPI	RGGWCCY	1 cut(s)	235
PstI	CTGCAG	1 cut(s)	1206
PstNI	CAGNNNCTG	4 cut(s)	1034, 1271, 1295, 1319
PsuI	RGATCY	1 cut(s)	426
PsyI	GACNNNGTC	1 cut(s)	239
PvuI	CGATCG	2 cut(s)	408, 477
RruI	TCGCGA	1 cut(s)	479
RsaI	GTAC	5 cut(s)	183, 510, 782, 931, 940
RsaNI	GTAC	5 cut(s)	182, 509, 781, 930, 939
SacI	GAGCTC	1 cut(s)	146
SapI	GCTCTTC	1 cut(s)	914
SaqAI	TTAA	1 cut(s)	903
Sau3AI	GATC	6 cut(s)	252, 288, 405, 426, 474, 1225
Sau96I	GGNCC	4 cut(s)	200, 235, 514, 1067
SchI	GAGTC	5 cut(s)	463, 515, 552, 665, 752
ScrFI	CCNGG	9 cut(s)	422, 423, 518, 618, 743, 1082, 1101, 1304, 1328
SduI	GDGCHC	2 cut(s)	146, 866
SfaNI	GCATC	1 cut(s)	359
SfcI	CTRYAG	1 cut(s)	1202
SfoI	GGCGCC	1 cut(s)	1009
SinI	GGWCC	2 cut(s)	235, 514
SmaI	CCCGGG	1 cut(s)	423
SmlI	CTYRAG	1 cut(s)	902
SmoI	CTYRAG	1 cut(s)	902
SphI	GCATGC	1 cut(s)	190
Sse9I	AATT	5 cut(s)	9, 592, 623, 655, 868
SseBI	AGGCCT	1 cut(s)	152
SspDI	GGCGCC	1 cut(s)	1007
SspMI	CTAG	2 cut(s)	833, 1151
SstI	GAGCTC	1 cut(s)	146
StuI	AGGCCT	1 cut(s)	152
StyD4I	CCNGG	9 cut(s)	420, 421, 516, 616, 741, 1080, 1099, 1302, 1326
TaaI	ACNGT	4 cut(s)	484, 664, 1036, 1049
TaiI	ACGT	4 cut(s)	546, 702, 753, 1002
TaqI	TCGA	3 cut(s)	146, 231, 1074
TasI	AATT	5 cut(s)	9, 592, 623, 655, 868
TauI	GCSGC	8 cut(s)	119, 122, 205, 261, 364, 385, 1068, 1354
TfiI	GAWTC	7 cut(s)	20, 34, 283, 888, 1053, 1116, 1375
Tru1I	TTAA	1 cut(s)	903
Tru9I	TTAA	1 cut(s)	903
TscAI	CASTG	6 cut(s)	363, 421, 688, 1021, 1039, 1135
TseFI	GTSAC	6 cut(s)	79, 416, 700, 967, 1030, 1206
Tsp45I	GTSAC	6 cut(s)	79, 416, 700, 967, 1030, 1206
TspDTI	ATGAA	1 cut(s)	602
TspGWI	ACGGA	4 cut(s)	15, 67, 154, 1368
TspMI	CCCGGG	1 cut(s)	421
TspRI	CASTG	6 cut(s)	363, 421, 688, 1021, 1039, 1135
Tth111I	GACNNNGTC	1 cut(s)	239
Van91I	CCANNNNNTGG	1 cut(s)	727
Vha464I	CTTAAG	1 cut(s)	902
VpaK11BI	GGWCC	2 cut(s)	235, 514
XapI	RAATTY	3 cut(s)	623, 655, 868
XceI	RCATGY	1 cut(s)	190
XmaI	CCCGGG	1 cut(s)	421
XmnI	GAANNNNTTC	1 cut(s)	872
XspI	CTAG	2 cut(s)	833, 1151

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.