Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005034

Physical Location & Seq

Genomic Coordinates Forward (+)

4679074 .. 4680672

Gene Structure 1599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG054700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1281 bp

ATGGCGACTTACCACAATTCCTCCGTTTCTTTTTTCACTCTCTTCCTCGCCACCACTCTCATCGCAACCGCCGCCACCTCCGCTTCACCCCTCACCGCCTCACCACCACCACTGCCTCCATTCCAGTCGTCTCCTCCGGCCAAGAGGCTTGAGGACGTCGTCGCCGATCCACCTCTCGGCTCCGGTGAGTTCACAAGCTGGATTCTAAAGTTCGCGCCCGCATCTCTCCCTGAAAACGACGCCGTGTCAAGCGTGGAGGCCTCAGCGCTGGCGTCACCTCAGCCGTCGCCGCAGGACCTCGACGAGCTCACGGAGGCAGCGATCGACTCTGGGACGCTTGCACACGTCATCACCTCCGGCAATTATCTCTCTCGCGCGACCGTCCCGCTCTCCGGAAAAGACGCCGTGTCACGCCTCCTGGCCTCAGCGCCGCCTTCTCCTCCATCGTCACTTCCGCCATCTCCACTGGCCACTACAGCGTCGCCGGAGAACGTCCAGCACGTCACGGAGTCAGCGATCGACTCCGGAAGCCTCGTACACGTCATCGCTGCCGGGACTCAGCTCTCTCCTCCACAGAGCATGACCGTCTTCCAGTCCAGAAACGACGACGTACCGGCCACAGACGAATTCTTCCCACCGGACCACGTGGTGCCTCAGCGGCTCACTTTCGCCGACCTGATTCTCTTCGAGACCGGTACTCGTCTTCCGACGCTCCTTCCCGGAAGATTTGTGACCATAACTAACAACACCGCCGCGAATTACACAGTGAACAACCGTCGCATAGTCCAGCCCGACGTCTATGTCACAGACAGTGTAGTCGTGCATCTGCTGGCTAAATACTCCAACGGCGGCGATACTAGTTCCGGCAGCGACCTCCTCGCGTTCTCCACCCTCTTGTTCTCTCTCGGGGTTTTTACTATTTTAGTGATCCTCGTCTTGATCTACAACTGGTGTCCTTACATATTTGGAGGTGTGGCCTTGGGAGAAGGGGTCGGTGCGGTGGGAAGGATTGTGGCAGGTGGAGGAGGCCCCGTCGAAGGCAACCGAGGATTCCTCAGCCGAATTGCTGGTGGCGTTGCGGGGGTTCCGGGGAGCGTGTTGAGCATAGGGAGGGCGGCGCAGCCACGTAACCCTGAATTAGATCCACTTCTTGACCGTGATGAACCACAGGTAAATCAGGATGTGGAATCGACAGAAGCAGCGGGTGCCAATGAAGACGGAGACGAAATTGTGGTGGATGAGAACCAGCAGCAGCAGCTTCCGGCCGACCAGGCCCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fasciclin

Protein Analysis

426

Amino Acids

44.4

Weight (kDa)

4.35

Isoelectric Point (pI)

53.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005034)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30800 AT4G12950 AT4G29980
fragaria_vesca	FvH4_1g24910 FvH4_3g11440 FvH4_3g19970 FvH4_5g18240 FvH4_5g21920 FvH4_6g29350
malus_domestica	MD00G1097400.v1.1
prunus_persica	Prupe.4G102300_v2.0.a1
pyrus_communis	pycom05g24700
rosa_laevigata	RLG00000031490 RLG00000032358
rosa_multiflora	Rmu_sc0017459.1_g000003
rosa_roxburghii	Rroxscaffold_1G00059350
rosa_rugosa	Rorug04G0431000 Rorug04G0432100 Rorug05G0042200
rosa_samantha	Rh4BG224100 Rh4CG235000 Rh4DG220900 Rh5BG055700 Rh5CG067100 Rh5CG067200 Rh5CG078900 Rh5DG054700 Rh5DG066900
rosa_wichuraiana	Rw4G019090 Rw5G011840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1007
AasI	GACNNNNNNGTC	2 cut(s)	800, 815
AatII	GACGTC	2 cut(s)	159, 798
Acc36I	ACCTGC	1 cut(s)	1007
AccB1I	GGYRCC	2 cut(s)	649, 1205
AccBSI	CCGCTC	1 cut(s)	388
AccII	CGCG	5 cut(s)	215, 375, 377, 755, 881
AccIII	TCCGGA	2 cut(s)	392, 524
AclWI	GGATC	3 cut(s)	161, 922, 1136
AcoI	YGGCCR	4 cut(s)	138, 468, 615, 1263
AcsI	RAATTY	1 cut(s)	626
AcvI	CACGTG	1 cut(s)	646
AcyI	GRCGYC	5 cut(s)	156, 240, 272, 402, 795
AdeI	CACNNNGTG	1 cut(s)	649
AfaI	GTAC	3 cut(s)	537, 612, 697
AfeI	AGCGCT	1 cut(s)	267
AfiI	CCNNNNNNNGG	3 cut(s)	176, 392, 1037
AflIII	ACRYGT	2 cut(s)	343, 538
AgeI	ACCGGT	1 cut(s)	692
AhdI	GACNNNNNGTC	2 cut(s)	244, 406
AhlI	ACTAGT	1 cut(s)	857
AjiI	CACGTC	3 cut(s)	346, 502, 541
AjnI	CCWGG	2 cut(s)	417, 1269
AluBI	AGCT	4 cut(s)	198, 307, 562, 1258
AluI	AGCT	4 cut(s)	198, 307, 562, 1258
Alw21I	GWGCWC	1 cut(s)	309
Alw26I	GTCTC	3 cut(s)	135, 683, 1215
AlwI	GGATC	3 cut(s)	161, 922, 1136
Ama87I	CYCGRG	1 cut(s)	905
Aor13HI	TCCGGA	2 cut(s)	392, 524
Aor51HI	AGCGCT	1 cut(s)	267
AoxI	GGCC	9 cut(s)	138, 258, 420, 468, 615, 975, 1027, 1263, 1272
ApeKI	GCWGC	8 cut(s)	317, 548, 867, 1120, 1199, 1249, 1252, 1255
ApoI	RAATTY	1 cut(s)	626
AsiGI	ACCGGT	1 cut(s)	692
AspLEI	GCGC	5 cut(s)	217, 268, 377, 430, 1120
AspS9I	GGNCC	4 cut(s)	295, 640, 1028, 1273
AsuC2I	CCSGG	3 cut(s)	553, 720, 1089
AsuHPI	GGTGA	6 cut(s)	78, 85, 93, 197, 267, 343
AvaI	CYCGRG	1 cut(s)	905
AvaII	GGWCC	2 cut(s)	295, 640
BalI	TGGCCA	1 cut(s)	470
BanI	GGYRCC	2 cut(s)	649, 1205
BanII	GRGCYC	1 cut(s)	309
BbrPI	CACGTG	1 cut(s)	646
BbsI	GAAGAC	3 cut(s)	580, 695, 1221
Bbv12I	GWGCWC	1 cut(s)	309
BbvCI	CCTCAGC	5 cut(s)	262, 279, 424, 654, 1055
BbvI	GCAGC	8 cut(s)	329, 535, 879, 1132, 1211, 1261, 1264, 1267
BccI	CCATC	2 cut(s)	451, 466
BceAI	ACGGC	4 cut(s)	227, 268, 389, 862
BciT130I	CCWGG	2 cut(s)	419, 1271
BcnI	CCSGG	3 cut(s)	553, 720, 1089
BcoDI	GTCTC	3 cut(s)	135, 683, 1215
BcuI	ACTAGT	1 cut(s)	857
BfaI	CTAG	1 cut(s)	858
BfmI	CTRYAG	1 cut(s)	474
BfoI	RGCGCY	2 cut(s)	269, 431
BfuAI	ACCTGC	1 cut(s)	1007
BglI	GCCNNNNNGGC	2 cut(s)	658, 1271
Bme1390I	CCNGG	5 cut(s)	419, 553, 720, 1089, 1271
Bme18I	GGWCC	2 cut(s)	295, 640
BmeRI	GACNNNNNGTC	2 cut(s)	244, 406
BmeT110I	CYCGRG	1 cut(s)	905
BmgBI	CACGTC	3 cut(s)	346, 502, 541
BmgT120I	GGNCC	4 cut(s)	295, 640, 1028, 1273
BmiI	GGNNCC	5 cut(s)	181, 651, 1030, 1086, 1207
BmrFI	CCNGG	5 cut(s)	419, 553, 720, 1089, 1271
BmrI	ACTGGG	1 cut(s)	1270
BmsI	GCATC	2 cut(s)	230, 832
BmuI	ACTGGG	1 cut(s)	1270
BpiI	GAAGAC	3 cut(s)	580, 695, 1221
BplI	GAGNNNNNCTC	2 cut(s)	1038, 1070
Bpu10I	CCTNAGC	5 cut(s)	262, 279, 424, 654, 1055
BpuEI	CTTGAG	1 cut(s)	170
BpuMI	CCSGG	3 cut(s)	553, 720, 1089
BsaAI	YACGTR	2 cut(s)	646, 1127
BsaHI	GRCGYC	5 cut(s)	156, 240, 272, 402, 795
BsaI	GGTCTC	1 cut(s)	683
BsaJI	CCNNGG	3 cut(s)	978, 1045, 1088
BsaWI	WCCGGW	5 cut(s)	182, 392, 524, 637, 692
BsaXI	ACNNNNNCTCC	6 cut(s)	5, 35, 975, 1005, 1017, 1047
Bsc4I	CCNNNNNNNGG	3 cut(s)	176, 392, 1037
Bse118I	RCCGGY	2 cut(s)	613, 692
Bse1I	ACTGG	5 cut(s)	124, 471, 592, 953, 1276
BseAI	TCCGGA	2 cut(s)	392, 524
BseBI	CCWGG	2 cut(s)	419, 1271
BseDI	CCNNGG	3 cut(s)	978, 1045, 1088
BseGI	GGATG	2 cut(s)	1186, 1243
BseLI	CCNNNNNNNGG	3 cut(s)	176, 392, 1037
BseMII	CTCAG	6 cut(s)	276, 293, 438, 572, 668, 1069
BseNI	ACTGG	5 cut(s)	124, 471, 592, 953, 1276
BseRI	GAGGAG	5 cut(s)	123, 429, 558, 866, 1038
BseX3I	CGGCCG	1 cut(s)	1263
BseXI	GCAGC	8 cut(s)	329, 535, 879, 1132, 1211, 1261, 1264, 1267
Bsh1236I	CGCG	5 cut(s)	215, 375, 377, 755, 881
Bsh1285I	CGRYCG	4 cut(s)	324, 381, 519, 1266
BshFI	GGCC	9 cut(s)	140, 260, 422, 470, 617, 977, 1029, 1265, 1274
BshNI	GGYRCC	2 cut(s)	649, 1205
BshTI	ACCGGT	1 cut(s)	692
BsiEI	CGRYCG	4 cut(s)	324, 381, 519, 1266
BsiHKAI	GWGCWC	1 cut(s)	309
BsiHKCI	CYCGRG	1 cut(s)	905
BslFI	GGGAC	3 cut(s)	346, 368, 568
BslI	CCNNNNNNNGG	3 cut(s)	176, 392, 1037
BsmAI	GTCTC	3 cut(s)	135, 683, 1215
BsmBI	CGTCTC	2 cut(s)	135, 1215
BsmFI	GGGAC	3 cut(s)	346, 368, 568
BsnI	GGCC	9 cut(s)	140, 260, 422, 470, 617, 977, 1029, 1265, 1274
Bso31I	GGTCTC	1 cut(s)	683
BsoBI	CYCGRG	1 cut(s)	905
Bsp1286I	GDGCHC	1 cut(s)	309
Bsp13I	TCCGGA	2 cut(s)	392, 524
Bsp143I	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
BspANI	GGCC	9 cut(s)	140, 260, 422, 470, 617, 977, 1029, 1265, 1274
BspCNI	CTCAG	6 cut(s)	275, 292, 437, 571, 667, 1068
BspEI	TCCGGA	2 cut(s)	392, 524
BspFNI	CGCG	5 cut(s)	215, 375, 377, 755, 881
BspLI	GGNNCC	5 cut(s)	181, 651, 1030, 1086, 1207
BspMI	ACCTGC	1 cut(s)	1007
BspPI	GGATC	3 cut(s)	161, 922, 1136
BspT107I	GGYRCC	2 cut(s)	649, 1205
BspTNI	GGTCTC	1 cut(s)	683
BsrBI	CCGCTC	1 cut(s)	388
BsrFI	RCCGGY	2 cut(s)	613, 692
BsrI	ACTGG	5 cut(s)	124, 471, 592, 953, 1276
BssAI	RCCGGY	2 cut(s)	613, 692
BssECI	CCNNGG	3 cut(s)	978, 1045, 1088
BssMI	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
BssNI	GRCGYC	5 cut(s)	156, 240, 272, 402, 795
BssT1I	CCWWGG	1 cut(s)	978
Bst2UI	CCWGG	2 cut(s)	419, 1271
Bst4CI	ACNGT	6 cut(s)	382, 586, 766, 776, 812, 1157
Bst6I	CTCTTC	2 cut(s)	47, 689
BstACI	GRCGYC	5 cut(s)	156, 240, 272, 402, 795
BstAPI	GCANNNNNTGC	1 cut(s)	1205
BstBAI	YACGTR	2 cut(s)	646, 1127
BstC8I	GCNNGC	4 cut(s)	219, 270, 339, 831
BstDEI	CTNAG	6 cut(s)	262, 279, 424, 558, 654, 1055
BstF5I	GGATG	2 cut(s)	1186, 1243
BstFNI	CGCG	5 cut(s)	215, 375, 377, 755, 881
BstH2I	RGCGCY	2 cut(s)	269, 431
BstHHI	GCGC	5 cut(s)	217, 268, 377, 430, 1120
BstKTI	GATC	6 cut(s)	169, 324, 519, 930, 942, 1144
BstMAI	GTCTC	3 cut(s)	135, 683, 1215
BstMBI	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
BstMCI	CGRYCG	4 cut(s)	324, 381, 519, 1266
BstMWI	GCNNNNNNNGC	9 cut(s)	71, 80, 289, 476, 658, 1101, 1205, 1255, 1271
BstNI	CCWGG	2 cut(s)	419, 1271
BstSCI	CCNGG	5 cut(s)	417, 551, 718, 1087, 1269
BstSFI	CTRYAG	1 cut(s)	474
BstUI	CGCG	5 cut(s)	215, 375, 377, 755, 881
BstV1I	GCAGC	8 cut(s)	329, 535, 879, 1132, 1211, 1261, 1264, 1267
BstV2I	GAAGAC	3 cut(s)	580, 695, 1221
BstX2I	RGATCY	1 cut(s)	1141
BstYI	RGATCY	1 cut(s)	1141
BstZI	CGGCCG	1 cut(s)	1263
BsuRI	GGCC	9 cut(s)	140, 260, 422, 470, 617, 977, 1029, 1265, 1274
BtgZI	GCGATG	2 cut(s)	46, 529
BtrI	CACGTC	3 cut(s)	346, 502, 541
BtsCI	GGATG	2 cut(s)	1186, 1243
BtsI	GCAGTG	1 cut(s)	110
BtsIMutI	CAGTG	4 cut(s)	110, 464, 771, 817
BveI	ACCTGC	1 cut(s)	1007
Cac8I	GCNNGC	4 cut(s)	219, 270, 339, 831
CfoI	GCGC	5 cut(s)	217, 268, 377, 430, 1120
Cfr10I	RCCGGY	2 cut(s)	613, 692
Cfr13I	GGNCC	4 cut(s)	295, 640, 1028, 1273
CseI	GACGC	6 cut(s)	248, 261, 343, 410, 468, 718
Csp6I	GTAC	3 cut(s)	536, 611, 696
CspAI	ACCGGT	1 cut(s)	692
CviAII	CATG	1 cut(s)	580
CviQI	GTAC	3 cut(s)	536, 611, 696
DdeI	CTNAG	6 cut(s)	262, 279, 424, 558, 654, 1055
DpnI	GATC	6 cut(s)	168, 323, 518, 929, 941, 1143
DpnII	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
DraIII	CACNNNGTG	1 cut(s)	649
DrdI	GACNNNNNNGTC	2 cut(s)	800, 815
DriI	GACNNNNNGTC	2 cut(s)	244, 406
DseDI	GACNNNNNNGTC	2 cut(s)	800, 815
EaeI	YGGCCR	4 cut(s)	138, 468, 615, 1263
EagI	CGGCCG	1 cut(s)	1263
Eam1104I	CTCTTC	2 cut(s)	47, 689
Eam1105I	GACNNNNNGTC	2 cut(s)	244, 406
EarI	CTCTTC	2 cut(s)	47, 689
EciI	GGCGGA	1 cut(s)	444
Ecl136II	GAGCTC	1 cut(s)	307
EclXI	CGGCCG	1 cut(s)	1263
Eco130I	CCWWGG	1 cut(s)	978
Eco147I	AGGCCT	1 cut(s)	260
Eco24I	GRGCYC	1 cut(s)	309
Eco31I	GGTCTC	1 cut(s)	683
Eco47I	GGWCC	2 cut(s)	295, 640
Eco47III	AGCGCT	1 cut(s)	267
Eco52I	CGGCCG	1 cut(s)	1263
Eco53kI	GAGCTC	1 cut(s)	307
Eco72I	CACGTG	1 cut(s)	646
Eco88I	CYCGRG	1 cut(s)	905
EcoICRI	GAGCTC	1 cut(s)	307
EcoO109I	RGGNCCY	2 cut(s)	295, 1028
EcoRI	GAATTC	1 cut(s)	626
EcoRII	CCWGG	2 cut(s)	417, 1269
EcoT14I	CCWWGG	1 cut(s)	978
EcoT38I	GRGCYC	1 cut(s)	309
ErhI	CCWWGG	1 cut(s)	978
Esp3I	CGTCTC	2 cut(s)	135, 1215
FaeI	CATG	1 cut(s)	583
FaiI	YATR	6 cut(s)	581, 737, 782, 801, 962, 1106
FaqI	GGGAC	3 cut(s)	346, 368, 568
FatI	CATG	1 cut(s)	579
FauI	CCCGC	4 cut(s)	226, 393, 1072, 1195
FokI	GGATG	2 cut(s)	1193, 1250
FriOI	GRGCYC	1 cut(s)	309
FspBI	CTAG	1 cut(s)	858
GlaI	GCGC	5 cut(s)	216, 267, 376, 429, 1119
HaeII	RGCGCY	2 cut(s)	269, 431
HaeIII	GGCC	9 cut(s)	140, 260, 422, 470, 617, 977, 1029, 1265, 1274
HgaI	GACGC	6 cut(s)	248, 261, 343, 410, 468, 718
HhaI	GCGC	5 cut(s)	217, 268, 377, 430, 1120
Hin1I	GRCGYC	5 cut(s)	156, 240, 272, 402, 795
Hin1II	CATG	1 cut(s)	583
Hin6I	GCGC	5 cut(s)	215, 266, 375, 428, 1118
HinP1I	GCGC	5 cut(s)	215, 266, 375, 428, 1118
HinfI	GANTC	8 cut(s)	202, 326, 509, 521, 556, 679, 1050, 1187
HphI	GGTGA	6 cut(s)	78, 85, 93, 197, 267, 343
Hpy166II	GTNNAC	3 cut(s)	192, 538, 769
Hpy188I	TCNGA	1 cut(s)	708
Hpy188III	TCNNGA	7 cut(s)	393, 525, 597, 688, 937, 1151, 1178
Hpy8I	GTNNAC	3 cut(s)	192, 538, 769
HpyAV	CCTTC	5 cut(s)	444, 725, 980, 999, 1031
HpyCH4III	ACNGT	6 cut(s)	382, 586, 766, 776, 812, 1157
HpyCH4IV	ACGT	9 cut(s)	156, 345, 492, 501, 540, 609, 645, 795, 1126
HpyCH4V	TGCA	2 cut(s)	341, 823
HpyF10VI	GCNNNNNNNGC	9 cut(s)	71, 80, 289, 476, 658, 1101, 1205, 1255, 1271
HpyF3I	CTNAG	6 cut(s)	262, 279, 424, 558, 654, 1055
HpySE526I	ACGT	9 cut(s)	156, 345, 492, 501, 540, 609, 645, 795, 1126
Hsp92I	GRCGYC	5 cut(s)	156, 240, 272, 402, 795
Hsp92II	CATG	1 cut(s)	583
HspAI	GCGC	5 cut(s)	215, 266, 375, 428, 1118
Kpn2I	TCCGGA	2 cut(s)	392, 524
Kzo9I	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
LmnI	GCTCC	3 cut(s)	185, 717, 1092
Lsp1109I	GCAGC	8 cut(s)	329, 535, 879, 1132, 1211, 1261, 1264, 1267
LweI	GCATC	2 cut(s)	230, 832
MaeI	CTAG	1 cut(s)	858
MaeII	ACGT	9 cut(s)	156, 345, 492, 501, 540, 609, 645, 795, 1126
MaeIII	GTNAC	7 cut(s)	273, 408, 447, 502, 730, 802, 1127
MalI	GATC	6 cut(s)	168, 323, 518, 929, 941, 1143
MbiI	CCGCTC	1 cut(s)	388
MboI	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
MboII	GAAGA	7 cut(s)	34, 580, 622, 676, 695, 735, 1226
MflI	RGATCY	1 cut(s)	1141
MhlI	GDGCHC	1 cut(s)	309
MlsI	TGGCCA	1 cut(s)	470
MluCI	AATT	7 cut(s)	16, 361, 626, 757, 1062, 1136, 1227
MluNI	TGGCCA	1 cut(s)	470
MlyI	GAGTC	4 cut(s)	320, 515, 518, 550
MmeI	TCCRAC	2 cut(s)	731, 867
Mox20I	TGGCCA	1 cut(s)	470
MroI	TCCGGA	2 cut(s)	392, 524
MscI	TGGCCA	1 cut(s)	470
Msp20I	TGGCCA	1 cut(s)	470
MspA1I	CMGCKG	2 cut(s)	658, 1202
MspR9I	CCNGG	5 cut(s)	419, 553, 720, 1089, 1271
MvaI	CCWGG	2 cut(s)	419, 1271
MvnI	CGCG	5 cut(s)	215, 375, 377, 755, 881
MwoI	GCNNNNNNNGC	9 cut(s)	71, 80, 289, 476, 658, 1101, 1205, 1255, 1271
NciI	CCSGG	3 cut(s)	553, 720, 1089
NdeII	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
NlaIII	CATG	1 cut(s)	583
NlaIV	GGNNCC	5 cut(s)	181, 651, 1030, 1086, 1207
NmeAIII	GCCGAG	1 cut(s)	156
NmuCI	GTSAC	6 cut(s)	273, 408, 447, 502, 730, 802
PaqCI	CACCTGC	1 cut(s)	1007
PceI	AGGCCT	1 cut(s)	260
PcsI	WCGNNNNNNNCGW	4 cut(s)	162, 317, 498, 512
PfeI	GAWTC	4 cut(s)	202, 679, 1050, 1187
PflFI	GACNNNGTC	1 cut(s)	158
PfoI	TCCNGGA	1 cut(s)	718
PinAI	ACCGGT	1 cut(s)	692
Ple19I	CGATCG	2 cut(s)	324, 519
PleI	GAGTC	4 cut(s)	320, 515, 517, 550
PmaCI	CACGTG	1 cut(s)	646
PmlI	CACGTG	1 cut(s)	646
PpsI	GAGTC	4 cut(s)	320, 515, 517, 550
Ppu21I	YACGTR	2 cut(s)	646, 1127
PpuMI	RGGWCCY	1 cut(s)	295
Psp124BI	GAGCTC	1 cut(s)	309
Psp5II	RGGWCCY	1 cut(s)	295
Psp6I	CCWGG	2 cut(s)	417, 1269
PspCI	CACGTG	1 cut(s)	646
PspGI	CCWGG	2 cut(s)	417, 1269
PspN4I	GGNNCC	5 cut(s)	181, 651, 1030, 1086, 1207
PspPI	GGNCC	4 cut(s)	295, 640, 1028, 1273
PspPPI	RGGWCCY	1 cut(s)	295
PsuI	RGATCY	1 cut(s)	1141
PsyI	GACNNNGTC	1 cut(s)	158
PvuI	CGATCG	2 cut(s)	324, 519
RsaI	GTAC	3 cut(s)	537, 612, 697
RsaNI	GTAC	3 cut(s)	536, 611, 696
SacI	GAGCTC	1 cut(s)	309
Sau3AI	GATC	6 cut(s)	166, 321, 516, 927, 939, 1141
Sau96I	GGNCC	4 cut(s)	295, 640, 1028, 1273
SchI	GAGTC	4 cut(s)	320, 515, 518, 550
ScrFI	CCNGG	5 cut(s)	419, 553, 720, 1089, 1271
SduI	GDGCHC	1 cut(s)	309
SfaNI	GCATC	2 cut(s)	230, 832
SfcI	CTRYAG	1 cut(s)	474
SfiI	GGCCNNNNNGGCC	1 cut(s)	1271
SinI	GGWCC	2 cut(s)	295, 640
SmlI	CTYRAG	1 cut(s)	149
SmoI	CTYRAG	1 cut(s)	149
SpeI	ACTAGT	1 cut(s)	857
Sse9I	AATT	7 cut(s)	16, 361, 626, 757, 1062, 1136, 1227
SseBI	AGGCCT	1 cut(s)	260
SspMI	CTAG	1 cut(s)	858
SstI	GAGCTC	1 cut(s)	309
StuI	AGGCCT	1 cut(s)	260
StyD4I	CCNGG	5 cut(s)	417, 551, 718, 1087, 1269
StyI	CCWWGG	1 cut(s)	978
TaaI	ACNGT	6 cut(s)	382, 586, 766, 776, 812, 1157
TaiI	ACGT	9 cut(s)	159, 348, 495, 504, 543, 612, 648, 798, 1129
TaqI	TCGA	6 cut(s)	300, 324, 519, 687, 1035, 1190
TasI	AATT	7 cut(s)	16, 361, 626, 757, 1062, 1136, 1227
TauI	GCSGC	7 cut(s)	74, 292, 433, 661, 755, 852, 1118
TfiI	GAWTC	4 cut(s)	202, 679, 1050, 1187
TscAI	CASTG	4 cut(s)	117, 471, 771, 817
TseFI	GTSAC	6 cut(s)	273, 408, 447, 502, 730, 802
TseI	GCWGC	8 cut(s)	317, 548, 867, 1120, 1199, 1249, 1252, 1255
Tsp45I	GTSAC	6 cut(s)	273, 408, 447, 502, 730, 802
TspDTI	ATGAA	2 cut(s)	1176, 1227
TspGWI	ACGGA	4 cut(s)	13, 326, 521, 1233
TspRI	CASTG	4 cut(s)	117, 471, 771, 817
Tth111I	GACNNNGTC	1 cut(s)	158
VpaK11BI	GGWCC	2 cut(s)	295, 640
XapI	RAATTY	1 cut(s)	626
XspI	CTAG	1 cut(s)	858
ZraI	GACGTC	2 cut(s)	157, 796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.