F-box family protein-related
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G20620 |
| fragaria_vesca | FvH4_3g21861 |
| malus_domestica | MD11G1226600.v1.1 |
| prunus_persica | Prupe.4G203700_v2.0.a1 Prupe.4G203700_v2.0.a1 |
| pyrus_communis | pycom11g19930 |
| rosa_chinensis | RchiOBHm_Chr5g0037641 RchiOBHm_Chr5g0037671 |
| rosa_laevigata | RLG00000033792 RLG00000033798 RLG00000033800 |
| rosa_multiflora | Rmu_sc0002482.1_g000039 Rmu_sc0006558.1_g000010 Rmu_sc0006558.1_g000022 Rmu_sc0021476.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00043270 Rroxscaffold_1G00043290 Rroxscaffold_1G00043310 Rroxscaffold_1G00043360 |
| rosa_rugosa | Rorug05G0166000 Rorug05G0166100 Rorug05G0166100 Rorug05G0166200 Rorug05G0166300 Rorug05G0166300 Rorug05G0166300 |
| rosa_samantha | Rh5AG255400 Rh5AG255600 Rh5BG257300 Rh5BG257700 Rh5CG290600 Rh5CG291100 Rh5DG265700 Rh5DG266400 Rh5DG267100 Rh5DG267200 |
| rosa_wichuraiana | Rw5G023670 Rw5G023700 Rw5G023990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 49 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 195 |
| AcoI | YGGCCR | 1 cut(s) | 197 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AcuI | CTGAAG | 1 cut(s) | 77 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 49, 50, 195 |
| AgsI | TTSAA | 1 cut(s) | 166 |
| AjnI | CCWGG | 2 cut(s) | 24, 199 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 21, 53 |
| AluBI | AGCT | 3 cut(s) | 91, 172, 211 |
| AluI | AGCT | 3 cut(s) | 91, 172, 211 |
| AoxI | GGCC | 2 cut(s) | 40, 197 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| AspS9I | GGNCC | 1 cut(s) | 41 |
| BalI | TGGCCA | 1 cut(s) | 199 |
| BccI | CCATC | 1 cut(s) | 197 |
| BciT130I | CCWGG | 2 cut(s) | 26, 201 |
| BfuAI | ACCTGC | 1 cut(s) | 49 |
| Bme1390I | CCNGG | 2 cut(s) | 26, 201 |
| BmgT120I | GGNCC | 1 cut(s) | 41 |
| BmrFI | CCNGG | 2 cut(s) | 26, 201 |
| BmsI | GCATC | 2 cut(s) | 87, 96 |
| BsaJI | CCNNGG | 1 cut(s) | 200 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 49, 50, 195 |
| BseBI | CCWGG | 2 cut(s) | 26, 201 |
| BseDI | CCNNGG | 1 cut(s) | 200 |
| BseGI | GGATG | 2 cut(s) | 64, 111 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 49, 50, 195 |
| BshFI | GGCC | 2 cut(s) | 42, 199 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 49, 50, 195 |
| BsmI | GAATGC | 1 cut(s) | 85 |
| BsnI | GGCC | 2 cut(s) | 42, 199 |
| Bsp143I | GATC | 1 cut(s) | 12 |
| BspANI | GGCC | 2 cut(s) | 42, 199 |
| BspMI | ACCTGC | 1 cut(s) | 49 |
| BssECI | CCNNGG | 1 cut(s) | 200 |
| BssMI | GATC | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 2 cut(s) | 26, 201 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 106 |
| BstC8I | GCNNGC | 2 cut(s) | 56, 143 |
| BstF5I | GGATG | 2 cut(s) | 64, 111 |
| BstKTI | GATC | 1 cut(s) | 15 |
| BstMBI | GATC | 1 cut(s) | 12 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 97, 106 |
| BstNI | CCWGG | 2 cut(s) | 26, 201 |
| BstNSI | RCATGY | 2 cut(s) | 77, 145 |
| BstSCI | CCNGG | 2 cut(s) | 24, 199 |
| BsuRI | GGCC | 2 cut(s) | 42, 199 |
| BtsCI | GGATG | 2 cut(s) | 64, 111 |
| BveI | ACCTGC | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 2 cut(s) | 56, 143 |
| Cfr13I | GGNCC | 1 cut(s) | 41 |
| CviAII | CATG | 3 cut(s) | 74, 142, 195 |
| CviJI | RGCY | 6 cut(s) | 42, 54, 91, 172, 199, 211 |
| CviKI_1 | RGCY | 6 cut(s) | 42, 54, 91, 172, 199, 211 |
| DpnI | GATC | 1 cut(s) | 14 |
| DpnII | GATC | 1 cut(s) | 12 |
| EaeI | YGGCCR | 1 cut(s) | 197 |
| Eco57I | CTGAAG | 1 cut(s) | 77 |
| EcoRI | GAATTC | 1 cut(s) | 17 |
| EcoRII | CCWGG | 2 cut(s) | 24, 199 |
| FaeI | CATG | 3 cut(s) | 77, 145, 198 |
| FaiI | YATR | 3 cut(s) | 75, 143, 196 |
| FatI | CATG | 3 cut(s) | 73, 141, 194 |
| FokI | GGATG | 2 cut(s) | 51, 118 |
| HaeIII | GGCC | 2 cut(s) | 42, 199 |
| Hin1II | CATG | 3 cut(s) | 77, 145, 198 |
| HindIII | AAGCTT | 1 cut(s) | 89 |
| Hpy188I | TCNGA | 1 cut(s) | 96 |
| HpyCH4V | TGCA | 4 cut(s) | 58, 83, 100, 109 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 97, 106 |
| Hsp92II | CATG | 3 cut(s) | 77, 145, 198 |
| Kzo9I | GATC | 1 cut(s) | 12 |
| LmnI | GCTCC | 2 cut(s) | 118, 208 |
| LpnPI | CCDG | 5 cut(s) | 11, 38, 44, 122, 186 |
| LweI | GCATC | 2 cut(s) | 87, 96 |
| MalI | GATC | 1 cut(s) | 14 |
| MboI | GATC | 1 cut(s) | 12 |
| MfeI | CAATTG | 1 cut(s) | 45 |
| MlsI | TGGCCA | 1 cut(s) | 199 |
| MluCI | AATT | 2 cut(s) | 17, 45 |
| MluNI | TGGCCA | 1 cut(s) | 199 |
| MnlI | CCTC | 3 cut(s) | 43, 78, 199 |
| Mox20I | TGGCCA | 1 cut(s) | 199 |
| MscI | TGGCCA | 1 cut(s) | 199 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| Msp20I | TGGCCA | 1 cut(s) | 199 |
| MspR9I | CCNGG | 2 cut(s) | 26, 201 |
| MunI | CAATTG | 1 cut(s) | 45 |
| Mva1269I | GAATGC | 1 cut(s) | 85 |
| MvaI | CCWGG | 2 cut(s) | 26, 201 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 97, 106 |
| NdeII | GATC | 1 cut(s) | 12 |
| NlaIII | CATG | 3 cut(s) | 77, 145, 198 |
| NspI | RCATGY | 2 cut(s) | 77, 145 |
| PaeI | GCATGC | 1 cut(s) | 145 |
| PctI | GAATGC | 1 cut(s) | 85 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 195 |
| Psp6I | CCWGG | 2 cut(s) | 24, 199 |
| PspGI | CCWGG | 2 cut(s) | 24, 199 |
| PspPI | GGNCC | 1 cut(s) | 41 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| Sau3AI | GATC | 1 cut(s) | 12 |
| Sau96I | GGNCC | 1 cut(s) | 41 |
| ScrFI | CCNGG | 2 cut(s) | 26, 201 |
| SetI | ASST | 4 cut(s) | 63, 93, 174, 213 |
| SfaNI | GCATC | 2 cut(s) | 87, 96 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| SphI | GCATGC | 1 cut(s) | 145 |
| Sse9I | AATT | 2 cut(s) | 17, 45 |
| StyD4I | CCNGG | 2 cut(s) | 24, 199 |
| TaqI | TCGA | 2 cut(s) | 15, 70 |
| TasI | AATT | 2 cut(s) | 17, 45 |
| TspDTI | ATGAA | 2 cut(s) | 17, 53 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 195 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XceI | RCATGY | 2 cut(s) | 77, 145 |