Rorug05G0166300

Multidrug pheromone exporter, MDR family, ABC transporter family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000317
Physical Location & Seq
Forward (+)
15387073 .. 15391416
4344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0166300.1

Sequence Viewer

Length: 1578 bp
ATGGAAGGAAAACGATTCAGAAGGTTCGGGATGCCAAGACGAAACCCACAAACCCACTCTCCCAATCTCCTCCCTACTCACTCCCACACTCCCTCCGCCTCCGCCTCCACCATATCCTGCTGCTACTGCGACTACAAATTCTGGGCCTTCAACGACCCTCTTTTCCATTTGGGCCGAAACCACTCCCTCCCTCTCAAAGCATGGTTCTCCGTCGGCGTCGGCTTCGGCCTCAGCGCCCTCCTCGCCGTCTCCCTCCTCCTCATCTTTGAACTGGGCCGTGCTCTCACTCTCTTCCCTGACCACCTCTTCTTGGATACCTTCCTCTCATCTATCTCCTCATGCTTCGCCAACCCATTGAACGACGCCGTCTATGTAGTGGTCGCGACCCTCGTTTCGGTTTCGGTGCACGAGTTCGGGCACGCCCTCGCTGCTGCCAGTGAGGGGATACGTATGGAGTATGTGGCTGTGTTTGTTGCGTGTATCTTTCCTGGGGCTCTGGTGGCTTTTAATGATGATGTAATGCAAGCATTGCCTTGTTTTACCGCGCTTCGAGTGTATTGTGCTGGGATTTGGCACAATGCAGTGTGCTGTGCGGTTTGCGGGTTGGCATTGCTACTCCTACCGGTGTTGTTGTTTCCGTTTTACATACACGGTGAAAGCCCCATGGTGTTGGGTGTACCTTCTACGTCGCCTTTGTCTGGTTACTTGTCCCGTGGTGATGTGATTGTATCGGTGGATGGTGTACCCATCCGTAATGCGCAAGAGTGGATGGATATGGCGGCTTTCTTGAATGAATTGTCACTTAATGATGGAAACCACAACATGGATGTCCAAAGCGTTGGGACAGTCAGTAACAGAAAGGGGTACTGTGTTCCTAATCCTACGATGGAAGAAAGCAAACAGATGCTTATAGTAGATAATCAGTCTTCATGTCCTGATGGTCTTACGTCATTTACAACTGTTCCCTGTGCTTATATAAACATCAATATTGAGAAAACCTACTGCTTGAATGCTAAGGATGTAGTCAAGCTTAATAAATGTGGTGATGGATGGCCGCCGACCATAACCAATGGCAGCAACTGCATATGTTCGCAGGACGAGTCCTGCGTAAGTCCAATTCAAATTCCCGGCTTAATATGGGTTGAGGTCACTTATTCAAGGCCCTATTCTCTGGAATGCTTGCGAGTTAGAAGAAAATCTTTTGCGGACTCAAGAAATTCTGATTCAATGGAATCTAACTGTGGCGGGACTTTTGTTTTTGTTGGTAACGTTATCTCCATGGCACGCTCAGTCCAGTTAACTGCATATCGACCTCGTTGGGCATTTCCTTTGGGTACATATCTTCCAAATGTACTTGAAAGGATTTTGAGATGCACATTCCAGGTCTCTCTAACACTAGCTCTTCTCAACAGTTTGCCGGTATACTTACTGGATGGTGAATCAATTCTAGAGGCGAGTCTTCTACACTTCACGTTGCTGTCCCCAAGGAAAAGAAGGAAAGTTGTTCAAGTTTGTCTTTTTGGGGGCACACTCATTTCCATCCTGGCCTTTTTGAGGATTGTTTTATATGGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

525

Amino Acids

57.71

Weight (kDa)

7.11

Isoelectric Point (pI)

46.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M50 PF02163 125 - 503 8.9e-18 Peptidase family M50
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 759
AccB7I CCANNNNNTGG 1 cut(s) 823
AccI GTMKAC 1 cut(s) 1422
AccII CGCG 2 cut(s) 383, 545
AciI CCGC 9 cut(s) 96, 102, 543, 593, 600, 779, 1055, 1205, 1245
AclI AACGTT 1 cut(s) 1269
AcoI YGGCCR 1 cut(s) 1052
AcsI RAATTY 3 cut(s) 137, 1122, 1216
AcyI GRCGYC 2 cut(s) 216, 363
AfaI GTAC 5 cut(s) 678, 744, 866, 1336, 1353
AfiI CCNNNNNNNGG 6 cut(s) 310, 394, 441, 698, 823, 1554
AgeI ACCGGT 1 cut(s) 622
AjnI CCWGG 3 cut(s) 487, 1380, 1542
AluBI AGCT 2 cut(s) 1030, 1400
AluI AGCT 2 cut(s) 1030, 1400
Alw21I GWGCWC 2 cut(s) 283, 408
Alw26I GTCTC 2 cut(s) 253, 1390
Alw44I GTGCAC 1 cut(s) 404
AlwNI CAGNNNCTG 1 cut(s) 1080
AoxI GGCC 7 cut(s) 144, 172, 226, 274, 1052, 1160, 1545
ApaLI GTGCAC 1 cut(s) 404
ApeKI GCWGC 4 cut(s) 120, 428, 431, 1074
ApoI RAATTY 3 cut(s) 137, 1122, 1216
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
AsiGI ACCGGT 1 cut(s) 622
Asp700I GAANNNNTTC 1 cut(s) 1443
AspLEI GCGC 3 cut(s) 236, 547, 760
AspS9I GGNCC 4 cut(s) 144, 172, 274, 1161
AsuC2I CCSGG 1 cut(s) 1128
AsuHPI GGTGA 4 cut(s) 665, 728, 1055, 1448
BaeGI GKGCMC 3 cut(s) 408, 420, 1529
BanII GRGCYC 1 cut(s) 496
BauI CACGAG 1 cut(s) 407
BbsI GAAGAC 2 cut(s) 918, 1451
Bbv12I GWGCWC 2 cut(s) 283, 408
BbvCI CCTCAGC 1 cut(s) 230
BbvI GCAGC 4 cut(s) 107, 415, 418, 1086
BceAI ACGGC 3 cut(s) 230, 261, 350
BciT130I CCWGG 3 cut(s) 489, 1382, 1544
BciVI GTATCC 2 cut(s) 307, 438
BcnI CCSGG 1 cut(s) 1128
BcoDI GTCTC 2 cut(s) 253, 1390
BfaI CTAG 2 cut(s) 1397, 1448
BfoI RGCGCY 1 cut(s) 237
BfuI GTATCC 2 cut(s) 307, 438
BisI GCNGC 6 cut(s) 121, 429, 432, 780, 1055, 1075
BlsI GCNGC 6 cut(s) 122, 430, 433, 781, 1056, 1076
Bme1390I CCNGG 4 cut(s) 489, 1128, 1382, 1544
BmgT120I GGNCC 4 cut(s) 144, 172, 274, 1161
BmrFI CCNGG 4 cut(s) 489, 1128, 1382, 1544
BmrI ACTGGG 1 cut(s) 281
BmsI GCATC 3 cut(s) 21, 894, 1361
BmuI ACTGGG 1 cut(s) 281
BpiI GAAGAC 2 cut(s) 918, 1451
Bpu10I CCTNAGC 2 cut(s) 230, 1014
BpuEI CTTGAG 1 cut(s) 1195
BpuMI CCSGG 1 cut(s) 1128
BsaAI YACGTR 1 cut(s) 449
BsaHI GRCGYC 2 cut(s) 216, 363
BsaI GGTCTC 1 cut(s) 1390
BsaJI CCNNGG 5 cut(s) 488, 663, 712, 1278, 1484
BsaWI WCCGGW 1 cut(s) 622
BsaXI ACNNNNNCTCC 6 cut(s) 43, 73, 77, 107, 1259, 1289
Bsc4I CCNNNNNNNGG 6 cut(s) 310, 394, 441, 698, 823, 1554
Bse118I RCCGGY 2 cut(s) 622, 1417
Bse1I ACTGG 4 cut(s) 276, 435, 1294, 1434
Bse3DI GCAATG 2 cut(s) 527, 608
BseBI CCWGG 3 cut(s) 489, 1382, 1544
BseDI CCNNGG 5 cut(s) 488, 663, 712, 1278, 1484
BseGI GGATG 9 cut(s) 36, 742, 747, 774, 832, 1024, 1055, 1438, 1539
BseLI CCNNNNNNNGG 6 cut(s) 310, 394, 441, 698, 823, 1554
BseMI GCAATG 2 cut(s) 527, 608
BseMII CTCAG 2 cut(s) 244, 1302
BseNI ACTGG 4 cut(s) 276, 435, 1294, 1434
BseRI GAGGAG 5 cut(s) 59, 230, 245, 248, 325
BseSI GKGCMC 3 cut(s) 408, 420, 1529
BseXI GCAGC 4 cut(s) 107, 415, 418, 1086
BseYI CCCAGC 1 cut(s) 563
Bsh1236I CGCG 2 cut(s) 383, 545
BshFI GGCC 7 cut(s) 146, 174, 228, 276, 1054, 1162, 1547
BshTI ACCGGT 1 cut(s) 622
BsiHKAI GWGCWC 2 cut(s) 283, 408
BsiSI CCGG 3 cut(s) 623, 1128, 1418
BslFI GGGAC 4 cut(s) 694, 856, 1261, 1465
BslI CCNNNNNNNGG 6 cut(s) 310, 394, 441, 698, 823, 1554
BsmAI GTCTC 2 cut(s) 253, 1390
BsmBI CGTCTC 1 cut(s) 253
BsmFI GGGAC 4 cut(s) 694, 856, 1261, 1465
BsmI GAATGC 2 cut(s) 1015, 1181
BsnI GGCC 7 cut(s) 146, 174, 228, 276, 1054, 1162, 1547
Bso31I GGTCTC 1 cut(s) 1390
Bsp1286I GDGCHC 5 cut(s) 283, 408, 420, 496, 1529
Bsp19I CCATGG 2 cut(s) 663, 1278
Bsp68I TCGCGA 1 cut(s) 383
BspACI CCGC 9 cut(s) 96, 102, 543, 593, 600, 779, 1055, 1205, 1245
BspANI GGCC 7 cut(s) 146, 174, 228, 276, 1054, 1162, 1547
BspCNI CTCAG 2 cut(s) 243, 1301
BspFNI CGCG 2 cut(s) 383, 545
BspQI GCTCTTC 1 cut(s) 1407
BspTNI GGTCTC 1 cut(s) 1390
BsrDI GCAATG 2 cut(s) 527, 608
BsrFI RCCGGY 2 cut(s) 622, 1417
BsrI ACTGG 4 cut(s) 276, 435, 1294, 1434
BssAI RCCGGY 2 cut(s) 622, 1417
BssECI CCNNGG 5 cut(s) 488, 663, 712, 1278, 1484
BssNAI GTATAC 1 cut(s) 1423
BssNI GRCGYC 2 cut(s) 216, 363
BssSI CACGAG 1 cut(s) 407
BssT1I CCWWGG 3 cut(s) 663, 1278, 1484
Bst1107I GTATAC 1 cut(s) 1423
Bst2BI CACGAG 1 cut(s) 407
Bst2UI CCWGG 3 cut(s) 489, 1382, 1544
Bst4CI ACNGT 6 cut(s) 653, 847, 869, 961, 1241, 1412
Bst6I CTCTTC 3 cut(s) 296, 311, 1407
BstACI GRCGYC 2 cut(s) 216, 363
BstAPI GCANNNNNTGC 2 cut(s) 529, 1080
BstBAI YACGTR 1 cut(s) 449
BstC8I GCNNGC 4 cut(s) 420, 525, 1181, 1285
BstDEI CTNAG 3 cut(s) 230, 1014, 1288
BstDSI CCRYGG 3 cut(s) 663, 712, 1278
BstENI CCTNNNNNAGG 1 cut(s) 1552
BstF5I GGATG 9 cut(s) 36, 742, 747, 774, 832, 1024, 1055, 1438, 1539
BstFNI CGCG 2 cut(s) 383, 545
BstH2I RGCGCY 1 cut(s) 237
BstHHI GCGC 3 cut(s) 236, 547, 760
BstMAI GTCTC 2 cut(s) 253, 1390
BstMWI GCNNNNNNNGC 6 cut(s) 126, 242, 428, 500, 529, 1080
BstNI CCWGG 3 cut(s) 489, 1382, 1544
BstSCI CCNGG 4 cut(s) 487, 1126, 1380, 1542
BstSLI GKGCMC 3 cut(s) 408, 420, 1529
BstSNI TACGTA 1 cut(s) 449
BstUI CGCG 2 cut(s) 383, 545
BstV1I GCAGC 4 cut(s) 107, 415, 418, 1086
BstV2I GAAGAC 2 cut(s) 918, 1451
BstXI CCANNNNNNTGG 2 cut(s) 670, 839
BstZ17I GTATAC 1 cut(s) 1423
BsuI GTATCC 2 cut(s) 307, 438
BsuRI GGCC 7 cut(s) 146, 174, 228, 276, 1054, 1162, 1547
BtgI CCRYGG 3 cut(s) 663, 712, 1278
BtsCI GGATG 9 cut(s) 36, 742, 747, 774, 832, 1024, 1055, 1438, 1539
BtsI GCAGTG 1 cut(s) 588
BtsIMutI CAGTG 2 cut(s) 442, 588
BtuMI TCGCGA 1 cut(s) 383
Cac8I GCNNGC 4 cut(s) 420, 525, 1181, 1285
CaiI CAGNNNCTG 1 cut(s) 1080
CfoI GCGC 3 cut(s) 236, 547, 760
Cfr10I RCCGGY 2 cut(s) 622, 1417
Cfr13I GGNCC 4 cut(s) 144, 172, 274, 1161
CseI GACGC 2 cut(s) 205, 371
Csp6I GTAC 5 cut(s) 677, 743, 865, 1335, 1352
CspAI ACCGGT 1 cut(s) 622
CviAII CATG 6 cut(s) 201, 339, 664, 823, 930, 1279
CviQI GTAC 5 cut(s) 677, 743, 865, 1335, 1352
DdeI CTNAG 3 cut(s) 230, 1014, 1288
EaeI YGGCCR 1 cut(s) 1052
Eam1104I CTCTTC 3 cut(s) 296, 311, 1407
EarI CTCTTC 3 cut(s) 296, 311, 1407
EciI GGCGGA 2 cut(s) 85, 91
Eco105I TACGTA 1 cut(s) 449
Eco130I CCWWGG 3 cut(s) 663, 1278, 1484
Eco24I GRGCYC 1 cut(s) 496
Eco31I GGTCTC 1 cut(s) 1390
EcoNI CCTNNNNNAGG 1 cut(s) 1552
EcoO109I RGGNCCY 1 cut(s) 1161
EcoRII CCWGG 3 cut(s) 487, 1380, 1542
EcoT14I CCWWGG 3 cut(s) 663, 1278, 1484
EcoT38I GRGCYC 1 cut(s) 496
ErhI CCWWGG 3 cut(s) 663, 1278, 1484
Esp3I CGTCTC 1 cut(s) 253
FaeI CATG 6 cut(s) 204, 342, 667, 826, 933, 1282
FalI AAGNNNNNCTT 4 cut(s) 1183, 1215, 1500, 1532
FaqI GGGAC 4 cut(s) 694, 856, 1261, 1465
FatI CATG 6 cut(s) 200, 338, 663, 822, 929, 1278
FauI CCCGC 2 cut(s) 593, 1238
FauNDI CATATG 1 cut(s) 1085
FblI GTMKAC 1 cut(s) 1422
Fnu4HI GCNGC 6 cut(s) 121, 429, 432, 780, 1055, 1075
FokI GGATG 9 cut(s) 43, 734, 749, 781, 839, 1031, 1062, 1445, 1526
FriOI GRGCYC 1 cut(s) 496
Fsp4HI GCNGC 6 cut(s) 121, 429, 432, 780, 1055, 1075
FspBI CTAG 2 cut(s) 1397, 1448
FspI TGCGCA 1 cut(s) 759
GlaI GCGC 3 cut(s) 235, 546, 759
GluI GCNGC 6 cut(s) 121, 429, 432, 780, 1055, 1075
GsaI CCCAGC 1 cut(s) 567
HaeII RGCGCY 1 cut(s) 237
HaeIII GGCC 7 cut(s) 146, 174, 228, 276, 1054, 1162, 1547
HapII CCGG 3 cut(s) 623, 1128, 1418
HgaI GACGC 2 cut(s) 205, 371
HhaI GCGC 3 cut(s) 236, 547, 760
Hin1I GRCGYC 2 cut(s) 216, 363
Hin1II CATG 6 cut(s) 204, 342, 667, 826, 933, 1282
Hin6I GCGC 3 cut(s) 234, 545, 758
HinP1I GCGC 3 cut(s) 234, 545, 758
HincII GTYRAC 1 cut(s) 1299
HindII GTYRAC 1 cut(s) 1299
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 7 cut(s) 15, 1100, 1208, 1223, 1232, 1439, 1456
HpaI GTTAAC 1 cut(s) 1299
HpaII CCGG 3 cut(s) 623, 1128, 1418
HphI GGTGA 4 cut(s) 665, 728, 1055, 1448
Hpy166II GTNNAC 5 cut(s) 406, 677, 743, 1299, 1423
Hpy188I TCNGA 2 cut(s) 20, 1222
Hpy188III TCNNGA 7 cut(s) 28, 382, 787, 935, 1172, 1212, 1448
Hpy8I GTNNAC 5 cut(s) 406, 677, 743, 1299, 1423
Hpy99I CGWCG 4 cut(s) 215, 221, 365, 691
HpyAV CCTTC 5 cut(s) 15, 157, 328, 690, 1488
HpyCH4III ACNGT 6 cut(s) 653, 847, 869, 961, 1241, 1412
HpyCH4IV ACGT 5 cut(s) 448, 686, 947, 1269, 1472
HpyCH4V TGCA 6 cut(s) 406, 523, 581, 1083, 1304, 1374
HpyF10VI GCNNNNNNNGC 6 cut(s) 126, 242, 428, 500, 529, 1080
HpyF3I CTNAG 3 cut(s) 230, 1014, 1288
HpySE526I ACGT 5 cut(s) 448, 686, 947, 1269, 1472
Hsp92I GRCGYC 2 cut(s) 216, 363
Hsp92II CATG 6 cut(s) 204, 342, 667, 826, 933, 1282
HspAI GCGC 3 cut(s) 234, 545, 758
KspAI GTTAAC 1 cut(s) 1299
LguI GCTCTTC 1 cut(s) 1407
Lsp1109I GCAGC 4 cut(s) 107, 415, 418, 1086
LweI GCATC 3 cut(s) 21, 894, 1361
MaeI CTAG 2 cut(s) 1397, 1448
MaeII ACGT 5 cut(s) 448, 686, 947, 1269, 1472
MaeIII GTNAC 5 cut(s) 701, 798, 851, 1147, 1265
MboII GAAGA 8 cut(s) 283, 298, 902, 918, 1203, 1334, 1394, 1451
MhlI GDGCHC 5 cut(s) 283, 408, 420, 496, 1529
MluCI AATT 6 cut(s) 137, 794, 1116, 1122, 1216, 1443
MlyI GAGTC 3 cut(s) 1109, 1202, 1465
MroXI GAANNNNTTC 1 cut(s) 1443
MseI TTAA 5 cut(s) 507, 804, 1032, 1133, 1298
MspI CCGG 3 cut(s) 623, 1128, 1418
MspR9I CCNGG 4 cut(s) 489, 1128, 1382, 1544
Mva1269I GAATGC 2 cut(s) 1015, 1181
MvaI CCWGG 3 cut(s) 489, 1382, 1544
MvnI CGCG 2 cut(s) 383, 545
MwoI GCNNNNNNNGC 6 cut(s) 126, 242, 428, 500, 529, 1080
NciI CCSGG 1 cut(s) 1128
NcoI CCATGG 2 cut(s) 663, 1278
NdeI CATATG 1 cut(s) 1085
NlaIII CATG 6 cut(s) 204, 342, 667, 826, 933, 1282
NmuCI GTSAC 2 cut(s) 798, 1147
NruI TCGCGA 1 cut(s) 383
NsbI TGCGCA 1 cut(s) 759
PciSI GCTCTTC 1 cut(s) 1407
PcsI WCGNNNNNNNCGW 2 cut(s) 387, 1104
PctI GAATGC 2 cut(s) 1015, 1181
PdmI GAANNNNTTC 1 cut(s) 1443
PfeI GAWTC 4 cut(s) 15, 1223, 1232, 1439
PflFI GACNNNGTC 1 cut(s) 365
PflMI CCANNNNNTGG 1 cut(s) 823
PinAI ACCGGT 1 cut(s) 622
PkrI GCNGC 6 cut(s) 122, 430, 433, 781, 1056, 1076
PleI GAGTC 3 cut(s) 1108, 1202, 1464
PpsI GAGTC 3 cut(s) 1108, 1202, 1464
Ppu21I YACGTR 1 cut(s) 449
Psp1406I AACGTT 1 cut(s) 1269
Psp6I CCWGG 3 cut(s) 487, 1380, 1542
PspFI CCCAGC 1 cut(s) 563
PspGI CCWGG 3 cut(s) 487, 1380, 1542
PspPI GGNCC 4 cut(s) 144, 172, 274, 1161
PstNI CAGNNNCTG 1 cut(s) 1080
PsyI GACNNNGTC 1 cut(s) 365
RruI TCGCGA 1 cut(s) 383
RsaI GTAC 5 cut(s) 678, 744, 866, 1336, 1353
RsaNI GTAC 5 cut(s) 677, 743, 865, 1335, 1352
SapI GCTCTTC 1 cut(s) 1407
SaqAI TTAA 5 cut(s) 507, 804, 1032, 1133, 1298
SatI GCNGC 6 cut(s) 121, 429, 432, 780, 1055, 1075
Sau96I GGNCC 4 cut(s) 144, 172, 274, 1161
SchI GAGTC 3 cut(s) 1109, 1202, 1465
ScrFI CCNGG 4 cut(s) 489, 1128, 1382, 1544
SduI GDGCHC 5 cut(s) 283, 408, 420, 496, 1529
SfaNI GCATC 3 cut(s) 21, 894, 1361
SmlI CTYRAG 1 cut(s) 1210
SmoI CTYRAG 1 cut(s) 1210
SnaBI TACGTA 1 cut(s) 449
Sse9I AATT 6 cut(s) 137, 794, 1116, 1122, 1216, 1443
SsiI CCGC 9 cut(s) 96, 102, 543, 593, 600, 779, 1055, 1205, 1245
SspI AATATT 1 cut(s) 988
SspMI CTAG 2 cut(s) 1397, 1448
StyD4I CCNGG 4 cut(s) 487, 1126, 1380, 1542
StyI CCWWGG 3 cut(s) 663, 1278, 1484
TaaI ACNGT 6 cut(s) 653, 847, 869, 961, 1241, 1412
TaiI ACGT 5 cut(s) 451, 689, 950, 1272, 1475
TaqI TCGA 2 cut(s) 550, 1309
TasI AATT 6 cut(s) 137, 794, 1116, 1122, 1216, 1443
TatI WGTACW 1 cut(s) 1351
TauI GCSGC 2 cut(s) 782, 1057
TfiI GAWTC 4 cut(s) 15, 1223, 1232, 1439
Tru1I TTAA 5 cut(s) 507, 804, 1032, 1133, 1298
Tru9I TTAA 5 cut(s) 507, 804, 1032, 1133, 1298
TscAI CASTG 2 cut(s) 442, 588
TseFI GTSAC 2 cut(s) 798, 1147
TseI GCWGC 4 cut(s) 120, 428, 431, 1074
Tsp45I GTSAC 2 cut(s) 798, 1147
TspDTI ATGAA 2 cut(s) 807, 918
TspGWI ACGGA 3 cut(s) 199, 627, 740
TspRI CASTG 2 cut(s) 442, 588
Tth111I GACNNNGTC 1 cut(s) 365
Van91I CCANNNNNTGG 1 cut(s) 823
VneI GTGCAC 1 cut(s) 404
XagI CCTNNNNNAGG 1 cut(s) 1552
XapI RAATTY 3 cut(s) 137, 1122, 1216
XbaI TCTAGA 1 cut(s) 1447
XmiI GTMKAC 1 cut(s) 1422
XmnI GAANNNNTTC 1 cut(s) 1443
XspI CTAG 2 cut(s) 1397, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.