RLG00000021903

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000317
Physical Location & Seq
Forward (+)
79158182 .. 79164794
6613 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021903

Sequence Viewer

Length: 3219 bp
ATGAGTAGTAGTTCAGAGAAAAATATTAGTACTGGAGCTAAGAAGAAACAAGTTGGATCAATTCGCTCAATTTTCATGCATGCAGATGCAGTGGATAAGTGGCTGATGACTCTGGGCTTGCTTGGGGCTGTTGGTGATGGATTGTCTGCACCGCTGGCTGTGTTTTTTGTTGGCCTTTACTTCAATAAAATAGGCAGAGCTGGAGCATCTGATTTAGATGCACGTAATTTCCACAATGATAACGGACTATTATTTACTTTCCTCTACTTGGCTTGCGCGTCGTGGTTTGGTTGTTTCTTAGAGGGGTATTGCTGGACACGAACAGCGGAGAGACAAGCTACAAGAATGAGGAGTAAATATATGAAAGCAGTGCTGCACCAAGACGTGGGTTACTTTGATTTGCATGTAACAAGCACCTCTGAGGTTCTAACGAGCATCTCAAATGATATTCAAATAATTCAAGATGTTCTCAGTCAAAAGGTGCCAGACTGTTTAAGTAAAGTATCTTCGTTCATTGCTGGGTACTTAATAGCATTAATTGTATTGATGTGGGATCTGGCCATTGTGGGACTCCCACTTGCTTTGCTTCTGATACTTCCCGGTTGGATCTGTGGAAGAAGTTTAACAGGATTAGCAAGAAAGAGAAGAGAAGAATGCATCAAGGCTGGATCAATAGCAGAGCAGGCAATATCATCCATTAGAACAGTTTATGCATTTACTGGAGAGAACAACGCTATATACCAATTCTCTGAAGCTCTACGAGGGACCATAAAGCTGGGGTTGAAGCAGGGCATGATTAAAGGTTTGGCCATTGGTAGCGGTACTGGCACAGCATTTGCCAATTGGGCTGTCATGTCTTATTATGGTAGCAGAAAGGTCATATCCCATGGTGCTCTAGGAGGGGCCATTTCAGCAGTTGGCCAGGAAATGGGTTCTGCTTTATCGAATTTGAAGTACATTGCAGAAGCATGTTCAGCTGGGGATCATATCCTGGAGATTATTAATCGAGTTCCAGAGATTGATTTAGAAAACATGGAAGGCGCAATTTTGGAGCATGTTACGAGCAAAGTTGAATTTAATCATGTGAAGTTTGCTTACCCCTCAAGACCTGAGAGCATCATCCTTAACAGATTCTGTCTAACCGTACCAGCAGGAAAAACTGTTGCGTTGGTGGGCTCAAGCGGATCAGGAAAATCCACAGTGATATCCCTCTTGCAAAGATTCTATGATCCACTTAAGTGGCTAAGGTCACAAATGGCATCCGTAAGCCAAGAGCCTTCATTGTTCTCAACCACCATCAAAGATAACATACTTCTAGGCAAGGAGGATGGTACAAGAGAGGAAATAGTAGAGGCAGCCAAAGCCAGCAACGCTCATGCTTTTATATGTCAGTTGCCTCAAGGATACGATACCCAGGTTGGTGAGAGAGGCAGTCAAGTATCTGGCGGACAAAAGCAGAGAATAGCTATTGCAAGAGCACTAATAAAGAAACCTCATATTCTTCTCCTTGATGAAGCCACAAGTGCATTAGACTCAGAGTCGGAAAGGCTTGTTCAAGAAGCCCTCCACAGGGCTGCCATGGGCAGAACTACCATTGTCATTGCACACCGCTTGTCCTCAATTCGAAATGCTGATCTTACTGGTGTCATGCAAAATGGTTGTGTCATAGAAACCGGCTCACACGATGAACTGATTCAACACCAAAATGGACTGTACACTTCTTTTGTTCGTCTCCAACAAACAGAAACAGAAACCCGGAAGATCAATTTCAATCTTGGTGGATTTGATAGTACTGCTGCAAAAGAATATCGAAACAACATGGTCACAAGAAAATCGTCAATTTGGAGATTGTTATCTATAACTTCTCCAGAGTGGAAACAAGCAATTTTGGGGTGTTTGAGTGCAATAATTTTTGGAGCAGTTCAACCCCTGTACGGACTCATCATGGTACCACATTATCAAGAGAATCAGGATTCTTGCCTTCTGTTTTCCCTTTTTGCATTGCTCATAAATATCATCCAACACTACAATTTCACATACATGGGGGAGTATTTGACCAAGCGGATTAGAGAAACGTTGTTGTCAAAGATGCACACTTTTGAAGTTGCATGGTTCGATGAGGTTCAAAATTCTAGCGGTGCCATTTGTGCTCAGCTCACCAAGGACGCTGAATTGGTGAGATCTTTAGCGGGTGACAGAATGGGTCTTCTTGTACAAACCATTTCTGCCGTAACTGTAGCATGGGCAATGGCCTCTATGCTAAAGCGTGTCCTACTCAAAAGAATATCCATCAGAGCCACCAAAGCCCAAGAGGAAAGTTGTAAGCTTGCAGCTGAAGCTATCTACAACCACCGAACCGTTACTGCCTTCTCGGCCCAGATCAGGATTTTAAAAATGCTAGACAAGGCCCAAGAAACCCCCATCCGGCTTGTCCACCAAGGCTTCCTTAATCCAAGATCAGTGTTTGAGACTATCCTCATTTTAGTAACTACCGGTCGGGTCATAGCAAATGCCGGAAGCATGACATCGGATCTTGCTATGGGCTTGGATGCAATCACGTCCATTTTTAGTATCTTAGACCGGACCACAAGAATCGAACCCCGAGCACCAGAAGAAGCCCAGGTAGAAAAGATAACAGGCCATGTCCAATTCCGTGATGTGTACTTTGCGTACCCAAATAGGCCCAATGTGATGGTCCTCCAAGGCTTCTCTATCCACATTGAAGCAGGAAAGTCGACAGCATGCATTGGTCGGACAAAGTGGATTAGGTCATTGAGGAAACACATGGCATTAGTCAGCCAAGAGCCAACGTTATTTGCTGGGACCATAAGAGAGAACATTGTATATGGCGCATCAGATAAGATTGATGAAATGATAATTATCGAGGTTGCAAGGAGTGCCACTGCTCATGTTTTTATCAGTGGATTAATCGACGGGTACAACACAATGTGTGGAGACAAAGGGGTGCAGCTATCTAGGGGACAAAAACAACGTATAGCTATAGCCAGGGCTATACTGAGAAAACCAGCAGTGTTGCTATTAGATGAAGCAACCAGCGCACTTGATAGCCAATCCGAGAAGAACTGTGAGCTCATTGTGGTGCTTGATCAAGGAAAGGTGGTGGAGAAAGGGACTCACTCTTCTCTTTTGTCCAAGTGGCCTACAGGCACTTATTACTCATTGATCAACCTCTCAAGAACGCAATCTTCAAAGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1073

Amino Acids

117.85

Weight (kDa)

8.96

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 37 - 296 8.4e-45 ABC transporter transmembrane region
ABC_tran PF00005 376 - 508 6.6e-24 ABC transporter
ABC_membrane PF00664 661 - 752 2.6e-14 ABC transporter transmembrane region
ABC_tran PF00005 915 - 1019 8.5e-14 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1948
AccB1I GGYRCC 3 cut(s) 481, 1948, 2138
AccB7I CCANNNNNTGG 2 cut(s) 385, 928
AccI GTMKAC 1 cut(s) 2735
AccII CGCG 1 cut(s) 278
AciI CCGC 9 cut(s) 152, 326, 819, 1182, 1446, 1609, 2062, 2136, 2189
AclI AACGTT 2 cut(s) 2075, 2810
AclWI GGATC 8 cut(s) 64, 561, 614, 676, 990, 1192, 1223, 2538
AcoI YGGCCR 3 cut(s) 558, 807, 919
AcsI RAATTY 3 cut(s) 946, 1073, 2128
AcuI CTGAAG 2 cut(s) 771, 2355
AdeI CACNNNGTG 1 cut(s) 2949
AfiI CCNNNNNNNGG 8 cut(s) 268, 385, 928, 1569, 1570, 1934, 2382, 2424
AflII CTTAAG 1 cut(s) 1235
AgeI ACCGGT 1 cut(s) 2492
AhdI GACNNNNNGTC 1 cut(s) 1537
AjiI CACGTC 2 cut(s) 385, 2559
AjnI CCWGG 5 cut(s) 921, 990, 1413, 2619, 3005
AleI CACNNNNGTG 1 cut(s) 1237
Alw21I GWGCWC 5 cut(s) 895, 1480, 2152, 2608, 3093
Alw26I GTCTC 4 cut(s) 325, 1736, 2462, 2949
AlwI GGATC 8 cut(s) 64, 561, 614, 676, 990, 1192, 1223, 2538
AlwNI CAGNNNCTG 1 cut(s) 1134
Ama87I CYCGRG 1 cut(s) 2601
ApeKI GCWGC 6 cut(s) 373, 1355, 1574, 1796, 2330, 2968
ApoI RAATTY 3 cut(s) 946, 1073, 2128
AseI ATTAAT 3 cut(s) 536, 1002, 2927
AsiGI ACCGGT 1 cut(s) 2492
Asp700I GAANNNNTTC 1 cut(s) 1692
Asp718I GGTACC 1 cut(s) 1948
AspLEI GCGC 4 cut(s) 278, 1043, 2852, 3059
AspS9I GGNCC 8 cut(s) 765, 903, 2374, 2407, 2583, 2682, 2695, 2823
AsuC2I CCSGG 2 cut(s) 600, 1756
AsuHPI GGTGA 5 cut(s) 146, 1433, 2149, 2188, 2204
AsuII TTCGAA 1 cut(s) 1624
AvaI CYCGRG 1 cut(s) 2601
AvaII GGWCC 4 cut(s) 765, 2583, 2695, 2823
BaeI ACNNNNGTAYC 2 cut(s) 1401, 1434
BalI TGGCCA 3 cut(s) 560, 809, 921
BanI GGYRCC 3 cut(s) 481, 1948, 2138
BanII GRGCYC 2 cut(s) 1178, 3093
BarI GAAGNNNNNNTAC 4 cut(s) 490, 522, 1079, 1111
BbsI GAAGAC 1 cut(s) 2198
Bbv12I GWGCWC 5 cut(s) 895, 1480, 2152, 2608, 3093
BbvI GCAGC 6 cut(s) 360, 1367, 1561, 1783, 2342, 2980
BccI CCATC 6 cut(s) 131, 1304, 1322, 2297, 2429, 2686
BceAI ACGGC 1 cut(s) 2213
BcgI CGANNNNNNTGC 2 cut(s) 2715, 2749
BciT130I CCWGG 5 cut(s) 923, 992, 1415, 2621, 3007
BciVI GTATCC 1 cut(s) 1397
BclI TGATCA 2 cut(s) 3106, 3183
BcnI CCSGG 2 cut(s) 600, 1756
BcoDI GTCTC 4 cut(s) 325, 1736, 2462, 2949
BfaI CTAG 5 cut(s) 896, 1316, 2133, 2399, 2976
BfmI CTRYAG 3 cut(s) 2235, 3000, 3162
BfrI CTTAAG 1 cut(s) 1235
BfuI GTATCC 1 cut(s) 1397
BglI GCCNNNNNGGC 2 cut(s) 845, 2372
BglII AGATCT 1 cut(s) 2180
BisI GCNGC 6 cut(s) 374, 1356, 1575, 1797, 2331, 2969
BlpI GCTNAGC 1 cut(s) 2151
BlsI GCNGC 6 cut(s) 375, 1357, 1576, 1798, 2332, 2970
BmcAI AGTACT 2 cut(s) 31, 1792
Bme1390I CCNGG 7 cut(s) 600, 923, 992, 1415, 1756, 2621, 3007
Bme18I GGWCC 4 cut(s) 765, 2583, 2695, 2823
BmeRI GACNNNNNGTC 1 cut(s) 1537
BmeT110I CYCGRG 1 cut(s) 2601
BmgBI CACGTC 2 cut(s) 385, 2559
BmgT120I GGNCC 8 cut(s) 765, 903, 2374, 2407, 2583, 2682, 2695, 2823
BmiI GGNNCC 6 cut(s) 483, 766, 904, 1950, 2140, 2824
BmrFI CCNGG 7 cut(s) 600, 923, 992, 1415, 1756, 2621, 3007
BpiI GAAGAC 1 cut(s) 2198
BpmI CTGGAG 5 cut(s) 54, 222, 741, 1013, 1851
Bpu10I CCTNAGC 1 cut(s) 1244
Bpu1102I GCTNAGC 1 cut(s) 2151
Bpu14I TTCGAA 1 cut(s) 1624
BpuEI CTTGAG 4 cut(s) 1087, 1162, 1383, 3178
BpuMI CCSGG 2 cut(s) 600, 1756
BsaAI YACGTR 1 cut(s) 224
BsaBI GATNNNNATC 2 cut(s) 1852, 2879
BsaJI CCNNGG 8 cut(s) 886, 1413, 1578, 2160, 2437, 2619, 2701, 3006
BsaWI WCCGGW 2 cut(s) 2492, 2580
Bsc4I CCNNNNNNNGG 8 cut(s) 268, 385, 928, 1569, 1570, 1934, 2382, 2424
Bse118I RCCGGY 2 cut(s) 1673, 2492
Bse1I ACTGG 4 cut(s) 37, 724, 829, 1645
Bse3DI GCAATG 5 cut(s) 513, 957, 1599, 2000, 2253
Bse8I GATNNNNATC 2 cut(s) 1852, 2879
BseBI CCWGG 5 cut(s) 923, 992, 1415, 2621, 3007
BseDI CCNNGG 8 cut(s) 886, 1413, 1578, 2160, 2437, 2619, 2701, 3006
BseGI GGATG 7 cut(s) 692, 1119, 1259, 1333, 2016, 2421, 2554
BseJI GATNNNNATC 2 cut(s) 1852, 2879
BseLI CCNNNNNNNGG 8 cut(s) 268, 385, 928, 1569, 1570, 1934, 2382, 2424
BseMI GCAATG 5 cut(s) 513, 957, 1599, 2000, 2253
BseMII CTCAG 6 cut(s) 411, 484, 1101, 1548, 2165, 3008
BseNI ACTGG 4 cut(s) 37, 724, 829, 1645
BseRI GAGGAG 1 cut(s) 364
BseXI GCAGC 6 cut(s) 360, 1367, 1561, 1783, 2342, 2980
BseYI CCCAGC 4 cut(s) 518, 775, 977, 2819
BsgI GTGCAG 3 cut(s) 132, 359, 2987
Bsh1236I CGCG 1 cut(s) 278
Bsh1285I CGRYCG 1 cut(s) 2497
BshNI GGYRCC 3 cut(s) 481, 1948, 2138
BshTI ACCGGT 1 cut(s) 2492
BsiEI CGRYCG 1 cut(s) 2497
BsiHKAI GWGCWC 5 cut(s) 895, 1480, 2152, 2608, 3093
BsiHKCI CYCGRG 1 cut(s) 2601
BsiSI CCGG 7 cut(s) 600, 1674, 1756, 2425, 2493, 2514, 2581
BslFI GGGAC 5 cut(s) 582, 778, 2836, 2994, 3145
BslI CCNNNNNNNGG 8 cut(s) 268, 385, 928, 1569, 1570, 1934, 2382, 2424
BsmAI GTCTC 4 cut(s) 325, 1736, 2462, 2949
BsmBI CGTCTC 1 cut(s) 1736
BsmFI GGGAC 5 cut(s) 582, 778, 2836, 2994, 3145
BsmI GAATGC 1 cut(s) 659
BsoBI CYCGRG 1 cut(s) 2601
Bsp119I TTCGAA 1 cut(s) 1624
Bsp1286I GDGCHC 6 cut(s) 895, 1178, 1480, 2152, 2608, 3093
Bsp1407I TGTACA 2 cut(s) 1713, 2212
Bsp1720I GCTNAGC 1 cut(s) 2151
Bsp19I CCATGG 2 cut(s) 886, 1578
BspACI CCGC 9 cut(s) 152, 326, 819, 1182, 1446, 1609, 2062, 2136, 2189
BspCNI CTCAG 6 cut(s) 412, 483, 1102, 1547, 2164, 3009
BspFNI CGCG 1 cut(s) 278
BspLI GGNNCC 6 cut(s) 483, 766, 904, 1950, 2140, 2824
BspPI GGATC 8 cut(s) 64, 561, 614, 676, 990, 1192, 1223, 2538
BspT104I TTCGAA 1 cut(s) 1624
BspT107I GGYRCC 3 cut(s) 481, 1948, 2138
BspTI CTTAAG 1 cut(s) 1235
BsrDI GCAATG 5 cut(s) 513, 957, 1599, 2000, 2253
BsrFI RCCGGY 2 cut(s) 1673, 2492
BsrGI TGTACA 2 cut(s) 1713, 2212
BsrI ACTGG 4 cut(s) 37, 724, 829, 1645
BssAI RCCGGY 2 cut(s) 1673, 2492
BssECI CCNNGG 8 cut(s) 886, 1413, 1578, 2160, 2437, 2619, 2701, 3006
BssT1I CCWWGG 5 cut(s) 886, 1578, 2160, 2437, 2701
Bst2UI CCWGG 5 cut(s) 923, 992, 1415, 2621, 3007
Bst4CI ACNGT 9 cut(s) 491, 706, 1144, 1162, 1201, 1713, 2236, 2359, 3086
Bst6I CTCTTC 2 cut(s) 640, 3145
BstAFI CTTAAG 1 cut(s) 1235
BstAPI GCANNNNNTGC 1 cut(s) 2897
BstAUI TGTACA 2 cut(s) 1713, 2212
BstBAI YACGTR 1 cut(s) 224
BstBI TTCGAA 1 cut(s) 1624
BstC8I GCNNGC 8 cut(s) 81, 119, 156, 274, 684, 1366, 2328, 2743
BstDSI CCRYGG 2 cut(s) 886, 1578
BstF5I GGATG 7 cut(s) 692, 1119, 1259, 1333, 2016, 2421, 2554
BstFNI CGCG 1 cut(s) 278
BstHHI GCGC 4 cut(s) 278, 1043, 2852, 3059
BstMAI GTCTC 4 cut(s) 325, 1736, 2462, 2949
BstMCI CGRYCG 1 cut(s) 2497
BstNI CCWGG 5 cut(s) 923, 992, 1415, 2621, 3007
BstNSI RCATGY 5 cut(s) 83, 407, 972, 1058, 2745
BstSCI CCNGG 7 cut(s) 598, 921, 990, 1413, 1754, 2619, 3005
BstSFI CTRYAG 3 cut(s) 2235, 3000, 3162
BstUI CGCG 1 cut(s) 278
BstV1I GCAGC 6 cut(s) 360, 1367, 1561, 1783, 2342, 2980
BstV2I GAAGAC 1 cut(s) 2198
BstX2I RGATCY 4 cut(s) 553, 606, 2180, 2530
BstXI CCANNNNNNTGG 3 cut(s) 775, 1239, 2692
BstYI RGATCY 4 cut(s) 553, 606, 2180, 2530
BsuI GTATCC 1 cut(s) 1397
BtgI CCRYGG 2 cut(s) 886, 1578
BtrI CACGTC 2 cut(s) 385, 2559
BtsCI GGATG 7 cut(s) 692, 1119, 1259, 1333, 2016, 2421, 2554
BtsI GCAGTG 4 cut(s) 96, 375, 2901, 3036
BtsIMutI CAGTG 7 cut(s) 96, 375, 1206, 2466, 2901, 2926, 3036
Cac8I GCNNGC 8 cut(s) 81, 119, 156, 274, 684, 1366, 2328, 2743
CaiI CAGNNNCTG 1 cut(s) 1134
CfoI GCGC 4 cut(s) 278, 1043, 2852, 3059
Cfr10I RCCGGY 2 cut(s) 1673, 2492
Cfr13I GGNCC 8 cut(s) 765, 903, 2374, 2407, 2583, 2682, 2695, 2823
CseI GACGC 2 cut(s) 267, 2174
CspAI ACCGGT 1 cut(s) 2492
CspCI CAANNNNNGTGG 4 cut(s) 564, 599, 1759, 1794
DraI TTTAAA 1 cut(s) 2391
DraIII CACNNNGTG 1 cut(s) 2949
DriI GACNNNNNGTC 1 cut(s) 1537
EaeI YGGCCR 3 cut(s) 558, 807, 919
Eam1104I CTCTTC 2 cut(s) 640, 3145
Eam1105I GACNNNNNGTC 1 cut(s) 1537
EarI CTCTTC 2 cut(s) 640, 3145
EciI GGCGGA 1 cut(s) 1461
Ecl136II GAGCTC 1 cut(s) 3091
Eco130I CCWWGG 5 cut(s) 886, 1578, 2160, 2437, 2701
Eco24I GRGCYC 2 cut(s) 1178, 3093
Eco32I GATATC 1 cut(s) 1206
Eco47I GGWCC 4 cut(s) 765, 2583, 2695, 2823
Eco53kI GAGCTC 1 cut(s) 3091
Eco57I CTGAAG 2 cut(s) 771, 2355
Eco88I CYCGRG 1 cut(s) 2601
EcoICRI GAGCTC 1 cut(s) 3091
EcoRII CCWGG 5 cut(s) 921, 990, 1413, 2619, 3005
EcoRV GATATC 1 cut(s) 1206
EcoT14I CCWWGG 5 cut(s) 886, 1578, 2160, 2437, 2701
EcoT22I ATGCAT 4 cut(s) 81, 659, 715, 2747
EcoT38I GRGCYC 2 cut(s) 1178, 3093
ErhI CCWWGG 5 cut(s) 886, 1578, 2160, 2437, 2701
Esp3I CGTCTC 1 cut(s) 1736
FalI AAGNNNNNCTT 2 cut(s) 2430, 2462
FaqI GGGAC 5 cut(s) 582, 778, 2836, 2994, 3145
FauI CCCGC 1 cut(s) 2182
FbaI TGATCA 2 cut(s) 3106, 3183
FblI GTMKAC 1 cut(s) 2735
Fnu4HI GCNGC 6 cut(s) 374, 1356, 1575, 1797, 2331, 2969
FokI GGATG 7 cut(s) 679, 1106, 1246, 1340, 2003, 2408, 2561
FriOI GRGCYC 2 cut(s) 1178, 3093
Fsp4HI GCNGC 6 cut(s) 374, 1356, 1575, 1797, 2331, 2969
FspBI CTAG 5 cut(s) 896, 1316, 2133, 2399, 2976
GlaI GCGC 4 cut(s) 277, 1042, 2851, 3058
GluI GCNGC 6 cut(s) 374, 1356, 1575, 1797, 2331, 2969
GsaI CCCAGC 4 cut(s) 522, 779, 981, 2823
GsuI CTGGAG 5 cut(s) 54, 222, 741, 1013, 1851
HapII CCGG 7 cut(s) 600, 1674, 1756, 2425, 2493, 2514, 2581
HgaI GACGC 2 cut(s) 267, 2174
HhaI GCGC 4 cut(s) 278, 1043, 2852, 3059
Hin6I GCGC 4 cut(s) 276, 1041, 2850, 3057
HinP1I GCGC 4 cut(s) 276, 1041, 2850, 3057
HincII GTYRAC 1 cut(s) 2736
HindII GTYRAC 1 cut(s) 2736
HindIII AAGCTT 1 cut(s) 2324
HpaII CCGG 7 cut(s) 600, 1674, 1756, 2425, 2493, 2514, 2581
HphI GGTGA 5 cut(s) 146, 1433, 2149, 2188, 2204
Hpy166II GTNNAC 4 cut(s) 1716, 2434, 2662, 2736
Hpy8I GTNNAC 4 cut(s) 1716, 2434, 2662, 2736
Hpy99I CGWCG 2 cut(s) 283, 2936
HpyAV CCTTC 4 cut(s) 1031, 1287, 1991, 2377
HpyCH4III ACNGT 9 cut(s) 491, 706, 1144, 1162, 1201, 1713, 2236, 2359, 3086
HpyCH4IV ACGT 6 cut(s) 223, 384, 2075, 2558, 2810, 2992
HpySE526I ACGT 6 cut(s) 223, 384, 2075, 2558, 2810, 2992
HspAI GCGC 4 cut(s) 276, 1041, 2850, 3057
KpnI GGTACC 1 cut(s) 1952
Ksp22I TGATCA 2 cut(s) 3106, 3183
LmnI GCTCC 4 cut(s) 35, 203, 1051, 1916
Lsp1109I GCAGC 6 cut(s) 360, 1367, 1561, 1783, 2342, 2980
MaeI CTAG 5 cut(s) 896, 1316, 2133, 2399, 2976
MaeII ACGT 6 cut(s) 223, 384, 2075, 2558, 2810, 2992
MaeIII GTNAC 9 cut(s) 389, 406, 1057, 1248, 1822, 2192, 2230, 2359, 2485
MfeI CAATTG 1 cut(s) 841
MflI RGATCY 4 cut(s) 553, 606, 2180, 2530
MhlI GDGCHC 6 cut(s) 895, 1178, 1480, 2152, 2608, 3093
MlsI TGGCCA 3 cut(s) 560, 809, 921
MluNI TGGCCA 3 cut(s) 560, 809, 921
MlyI GAGTC 6 cut(s) 103, 564, 1526, 1547, 1932, 3127
MmeI TCCRAC 6 cut(s) 34, 584, 1521, 1759, 2044, 2732
Mox20I TGGCCA 3 cut(s) 560, 809, 921
Mph1103I ATGCAT 4 cut(s) 81, 659, 715, 2747
MroXI GAANNNNTTC 1 cut(s) 1692
MscI TGGCCA 3 cut(s) 560, 809, 921
MslI CAYNNNNRTG 5 cut(s) 84, 1237, 1704, 2039, 3098
Msp20I TGGCCA 3 cut(s) 560, 809, 921
MspA1I CMGCKG 4 cut(s) 154, 326, 977, 2333
MspCI CTTAAG 1 cut(s) 1235
MspI CCGG 7 cut(s) 600, 1674, 1756, 2425, 2493, 2514, 2581
MspR9I CCNGG 7 cut(s) 600, 923, 992, 1415, 1756, 2621, 3007
MunI CAATTG 1 cut(s) 841
Mva1269I GAATGC 1 cut(s) 659
MvaI CCWGG 5 cut(s) 923, 992, 1415, 2621, 3007
MvnI CGCG 1 cut(s) 278
NciI CCSGG 2 cut(s) 600, 1756
NcoI CCATGG 2 cut(s) 886, 1578
NlaIV GGNNCC 6 cut(s) 483, 766, 904, 1950, 2140, 2824
NmeAIII GCCGAG 1 cut(s) 2351
NmuCI GTSAC 3 cut(s) 1248, 1822, 2192
NsiI ATGCAT 4 cut(s) 81, 659, 715, 2747
NspI RCATGY 5 cut(s) 83, 407, 972, 1058, 2745
NspV TTCGAA 1 cut(s) 1624
OliI CACNNNNGTG 1 cut(s) 1237
PaeI GCATGC 2 cut(s) 83, 2745
PctI GAATGC 1 cut(s) 659
PdmI GAANNNNTTC 1 cut(s) 1692
PfeI GAWTC 6 cut(s) 1131, 1221, 1693, 1966, 1973, 2592
PflMI CCANNNNNTGG 2 cut(s) 385, 928
PfoI TCCNGGA 1 cut(s) 990
PinAI ACCGGT 1 cut(s) 2492
PkrI GCNGC 6 cut(s) 375, 1357, 1576, 1798, 2332, 2970
PleI GAGTC 6 cut(s) 103, 564, 1526, 1546, 1932, 3127
PpsI GAGTC 6 cut(s) 103, 564, 1526, 1546, 1932, 3127
Ppu21I YACGTR 1 cut(s) 224
PshBI ATTAAT 3 cut(s) 536, 1002, 2927
Psp124BI GAGCTC 1 cut(s) 3093
Psp1406I AACGTT 2 cut(s) 2075, 2810
Psp6I CCWGG 5 cut(s) 921, 990, 1413, 2619, 3005
PspFI CCCAGC 4 cut(s) 518, 775, 977, 2819
PspGI CCWGG 5 cut(s) 921, 990, 1413, 2619, 3005
PspN4I GGNNCC 6 cut(s) 483, 766, 904, 1950, 2140, 2824
PspPI GGNCC 8 cut(s) 765, 903, 2374, 2407, 2583, 2682, 2695, 2823
PstNI CAGNNNCTG 1 cut(s) 1134
PsuI RGATCY 4 cut(s) 553, 606, 2180, 2530
PvuII CAGCTG 2 cut(s) 977, 2333
RseI CAYNNNNRTG 5 cut(s) 84, 1237, 1704, 2039, 3098
SacI GAGCTC 1 cut(s) 3093
SalI GTCGAC 1 cut(s) 2734
SatI GCNGC 6 cut(s) 374, 1356, 1575, 1797, 2331, 2969
Sau96I GGNCC 8 cut(s) 765, 903, 2374, 2407, 2583, 2682, 2695, 2823
ScaI AGTACT 2 cut(s) 31, 1792
SchI GAGTC 6 cut(s) 103, 564, 1526, 1547, 1932, 3127
ScrFI CCNGG 7 cut(s) 600, 923, 992, 1415, 1756, 2621, 3007
SduI GDGCHC 6 cut(s) 895, 1178, 1480, 2152, 2608, 3093
SfcI CTRYAG 3 cut(s) 2235, 3000, 3162
SfuI TTCGAA 1 cut(s) 1624
SinI GGWCC 4 cut(s) 765, 2583, 2695, 2823
SmiMI CAYNNNNRTG 5 cut(s) 84, 1237, 1704, 2039, 3098
SmlI CTYRAG 5 cut(s) 1102, 1177, 1235, 1398, 3193
SmoI CTYRAG 5 cut(s) 1102, 1177, 1235, 1398, 3193
SphI GCATGC 2 cut(s) 83, 2745
SsiI CCGC 9 cut(s) 152, 326, 819, 1182, 1446, 1609, 2062, 2136, 2189
SspI AATATT 1 cut(s) 25
SspMI CTAG 5 cut(s) 896, 1316, 2133, 2399, 2976
SstI GAGCTC 1 cut(s) 3093
StyD4I CCNGG 7 cut(s) 598, 921, 990, 1413, 1754, 2619, 3005
StyI CCWWGG 5 cut(s) 886, 1578, 2160, 2437, 2701
TaaI ACNGT 9 cut(s) 491, 706, 1144, 1162, 1201, 1713, 2236, 2359, 3086
TaiI ACGT 6 cut(s) 226, 387, 2078, 2561, 2813, 2995
TaqI TCGA 9 cut(s) 944, 1006, 1624, 1810, 2115, 2595, 2735, 2883, 2931
TatI WGTACW 6 cut(s) 29, 954, 1713, 1790, 2212, 2661
TfiI GAWTC 6 cut(s) 1131, 1221, 1693, 1966, 1973, 2592
TscAI CASTG 7 cut(s) 96, 375, 1206, 2466, 2908, 2926, 3036
TseFI GTSAC 3 cut(s) 1248, 1822, 2192
TseI GCWGC 6 cut(s) 373, 1355, 1574, 1796, 2330, 2968
Tsp45I GTSAC 3 cut(s) 1248, 1822, 2192
TspDTI ATGAA 8 cut(s) 64, 377, 502, 1269, 1527, 1701, 2883, 3060
TspGWI ACGGA 4 cut(s) 258, 1252, 1950, 2642
TspRI CASTG 7 cut(s) 96, 375, 1206, 2466, 2908, 2926, 3036
Van91I CCANNNNNTGG 2 cut(s) 385, 928
Vha464I CTTAAG 1 cut(s) 1235
VpaK11BI GGWCC 4 cut(s) 765, 2583, 2695, 2823
VspI ATTAAT 3 cut(s) 536, 1002, 2927
XapI RAATTY 3 cut(s) 946, 1073, 2128
XceI RCATGY 5 cut(s) 83, 407, 972, 1058, 2745
XmiI GTMKAC 1 cut(s) 2735
XmnI GAANNNNTTC 1 cut(s) 1692
XspI CTAG 5 cut(s) 896, 1316, 2133, 2399, 2976
ZrmI AGTACT 2 cut(s) 31, 1792
Zsp2I ATGCAT 4 cut(s) 81, 659, 715, 2747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.