Rh2CG597100

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000317
Physical Location & Seq
Forward (+)
77270427 .. 77276312
5886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG597100.1

Sequence Viewer

Length: 2865 bp
ATGTTGAATAAATTGGTATACAGGGCATTGGGCGCAGGCTTATCAAACTTGAAGTACTTCTCAGAAGCGTGTTCAGCCGCTGAACGAATAATGGAGGTGATTCGGAGAGTCCCCAAGATCGATTCAGACAACATGGAAGGAGAAATACTAGAGAACGTTTTAGGGGAAGTTGAATTCAAGCACGTAGAATTCGCCTACCCGTCAAGGCCAGAAAGCATTATCTTCAAAGACTTCAACTTAAGGGTTCCAGCTGGGAAAACAGTGGCATTGGTGGGTGGTAGTGGCTCCGGAAAATCGACAGTGATTTCGCTGTTGCAGAGATTTTATGATCCACTCGGGGGAGAGATTCTCATTGATGGGGTGGCCATAAACAAGTGTCAGCTCAAGTGGTTGAGGTCACAGATGGGACTGGTGAGCCAAGAGCCTGCTCTGTTTGCAACCAGCATAAAAGAGAACATACTTTTTGGGAAAGAAGATGCTACCATTGAAGAGGTTATTGAGGCTGGTAAAGCTTCTAATGCTGACAATTTCATCTCTCAGTTGCCTCTGGGATATGACACACAGGTTGGCGAGAGAGGTGTTCAAATGTCGGGAGGGCAGAAGCAAAGAATAGCCATTGCCCGAGCAATCATCAAGAAACCACGCATCCTTCTTCTAGATGAAGCCACGAGCGCATTGGACTCCGAATCGGAGCGTGTAGTTCAAGAAGCTCTTGATAAAGCAGCTGTCGGACGTACGACGATAATCATCGCCCACCGCCTCTCTACCATCCGAAACGCCGACGTCATTACTGTCGTTCAAAACGGGCAGGTCATGGAGACGGGCTCACACAACGAGCTATTCCAACGTGAAAATGGTCTCTATACCTCGCTTGTCCGCTTACAACAAACAGAGAAGCAAAGAGGACCAGAAGAGCAAGGACATTGCGCATCGTCATCTATATCAAACATGGACATTCACAACACAAGCAGTCGTAGGCTTTCTATGGTCAGCCGCTCCAGTTCTGCTAACTCATTTGCGCAAGGTCGAGCTTCATCAGTGGTTGCTGGGGAAGATGAGATCGTAGAAGGGCAGAAGCTGCCTGTCCCATCTTTTCGGAGATTGATAGCTTTGAACCTTCCGGAGTGGAAACAAGCGCTTTTGGGGTGCTTCAGTGCTGTTCTTTTTGGTGCAGTTCAGCCAGCATATGCATTTGCTATGGGGTCAATGGTGTCGGTTTATTTCTTGACAGATCACGATGAGATCAAGGAGAAGACGAGGATTTATTCACTTTGCTTTCTGGGGTTGGCTATTTTCTCTTTGCTGGTTAACATTTGCCAGCATTACAACTTTGCCTACATGGGAGAGTACTTGACTAAGAGAGTTAGAGAGAGGATGCTTTCCAAGATTCTTACATTCGAAGTTGGGTGGTTTGATCAAGATGAGAATTCCAGTGGTGCCATTTGCTCTAGACTCGCCAAAGATGCCAATGTGGTGAGATCTTTAGTGGGTGATCGGATGGCTCTACTTGTTCAAACTTTCTCAGCTGTGACTGTAGCCTGCACAATGGGTTTGGTCATTGCATGGAGACTTGCCTCAGTTATGATAGCAGTACAACCCATTATCATTGTGAGCTACTACACCAGGCGTGTCCTGCTCAAAAGTATGTCCAGGAAAGCCATCAAAGCTCAAGATGAAAGCAGCAAGCTAGCTGCAGAAGCAGTCTCCAACCTCAGAACCATCACTGCCTTCTCATCTCAGGACCGTCTGTTGAAAATGCTCGAAAAGGCCCAAGAAGGCCCACGTAAGGAAAGCATCCGACAATCGTGGTTTGCGGGGATTGGACTTGGTTGTTCTCAAAGCCTTACGACTATCACCTGGGCTTTTGACTTTTGGTACGGTGGCAAGCTCGTTGCCAAGGGCTACGTCACAGCAAAAGCTCTTTTTGAGACTTTCATGATATTGGTGAGCACGGGCCGGGTTATTGCCGATGCCGGAAGCATGACTTCAGATCTTGCGAAAGGGTCGGATGCTGTTGCGTCCGTATTTGCAGTGTTGGACCGGTACACAAAAATAGAACCCGAAGACCCGGAAGGTTGCGAGCCCAAAAGAATAACCGGTCACATAGAATTTCGTAACGTACATTTTGCATACCCCGCTAGGCCTGATGTGATGATTTTCAAAGGATTCTCAATCAAAATCGAAGCTGGAAAATCAACTGCATTGGTGGGACAAAGCGGGTCTGGAAAGTCAACAATCATTGGATTAATCGAAAGATTTTATGATCCATTAAAAGGAGAAGTGATAATTGACGGTCGAGACACGAAATCGTACCACCTCAGGTCATTAAGGAAACATATAGCACTTGTTAGCCAAGAGCCAACGTTATTTTTAGGTACCATAAGAGAGAACATCATGTATGGCATGTCGGATAAGATTGACGAATTGGAGATAATCGAAGCAGCGAAGGCAGCCAACGCTCATGATTTCATTTCAAGCCTCAAGGAGGGATATGACACTTCATGTGGAGACAGAGGAGTGCAACTATCTGGGGGACAGAAGCAACGCATTGCTATAGCGAGAGCTATATTGAGAAACCCAGTGGTGTTACTATTAGATGAGGCGACCAGTGCGCTTGATAGTCAGTCGGAAAAGGTGGTGCAAGACGCGCTAGAGCGGGTGATGGTGGGGAGGACTAGTGTGGTGGTAGCGCACAGGTTGAGTACCATACAACACTGTGATCTTATCACAGTACTTGATAAAGGGAGGGTAGTGGAGAAAGGGACTCACTCATCTCTTTTGGCCAAAGGGCCTAAAGGTTCTTACTACTCATTGGTTAGCTTGCAAAGGACGCCATCTGCATCAGATCTTACTAAATTGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

954

Amino Acids

104.72

Weight (kDa)

8.65

Isoelectric Point (pI)

43.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 76 - 224 2.6e-33 ABC transporter
ABC_membrane PF00664 380 - 649 3.9e-50 ABC transporter transmembrane region
ABC_tran PF00005 721 - 870 2.6e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 786
Acc16I TGCGCA 2 cut(s) 928, 1020
Acc36I ACCTGC 1 cut(s) 799
Acc65I GGTACC 1 cut(s) 2375
AccB1I GGYRCC 2 cut(s) 1436, 2375
AccBSI CCGCTC 2 cut(s) 996, 2656
AccI GTMKAC 1 cut(s) 18
AccII CGCG 1 cut(s) 2648
AccIII TCCGGA 2 cut(s) 287, 1120
AciI CCGC 8 cut(s) 78, 757, 877, 994, 1814, 2136, 2217, 2656
AclI AACGTT 2 cut(s) 156, 2363
AclWI GGATC 2 cut(s) 323, 2258
AcoI YGGCCR 2 cut(s) 363, 2781
AcsI RAATTY 4 cut(s) 173, 188, 1426, 2108
AcuI CTGAAG 2 cut(s) 1135, 1971
AcyI GRCGYC 2 cut(s) 783, 2831
AfeI AGCGCT 1 cut(s) 1137
AfiI CCNNNNNNNGG 4 cut(s) 338, 1786, 2273, 2485
AflII CTTAAG 1 cut(s) 238
AgeI ACCGGT 2 cut(s) 2040, 2096
AhlI ACTAGT 1 cut(s) 2675
AjnI CCWGG 3 cut(s) 1622, 1649, 1856
Alw21I GWGCWC 1 cut(s) 1952
Alw26I GTCTC 7 cut(s) 812, 863, 1561, 1708, 1922, 2292, 2502
AlwI GGATC 2 cut(s) 323, 2258
AlwNI CAGNNNCTG 2 cut(s) 80, 1078
Ama87I CYCGRG 2 cut(s) 335, 621
Aor13HI TCCGGA 2 cut(s) 287, 1120
Aor51HI AGCGCT 1 cut(s) 1137
AoxI GGCC 8 cut(s) 206, 363, 1767, 1777, 1954, 2141, 2781, 2789
ApeKI GCWGC 6 cut(s) 722, 1078, 1680, 1691, 2441, 2450
ApoI RAATTY 4 cut(s) 173, 188, 1426, 2108
ArsI GACNNNNNNTTYG 2 cut(s) 289, 321
AseI ATTAAT 1 cut(s) 2246
AsiGI ACCGGT 2 cut(s) 2040, 2096
Asp700I GAANNNNTTC 1 cut(s) 56
Asp718I GGTACC 1 cut(s) 2375
AspLEI GCGC 8 cut(s) 35, 674, 929, 1021, 1138, 2614, 2650, 2692
AspS9I GGNCC 7 cut(s) 905, 1741, 1768, 1778, 1954, 2038, 2789
AsuC2I CCSGG 2 cut(s) 1958, 2069
AsuHPI GGTGA 7 cut(s) 109, 424, 1486, 1502, 1846, 1957, 2671
AsuII TTCGAA 1 cut(s) 1398
AsuNHI GCTAGC 1 cut(s) 1687
AvaI CYCGRG 2 cut(s) 335, 621
AvaII GGWCC 3 cut(s) 905, 1741, 2038
AxyI CCTNAGG 1 cut(s) 2318
BalI TGGCCA 2 cut(s) 365, 2783
BanI GGYRCC 2 cut(s) 1436, 2375
BanII GRGCYC 2 cut(s) 827, 2085
BarI GAAGNNNNNNTAC 2 cut(s) 129, 161
BauI CACGAG 1 cut(s) 667
BbsI GAAGAC 2 cut(s) 1259, 2070
Bbv12I GWGCWC 1 cut(s) 1952
BbvI GCAGC 6 cut(s) 734, 1065, 1678, 1692, 2453, 2462
BccI CCATC 9 cut(s) 350, 397, 776, 1096, 1492, 1667, 1727, 2656, 2842
BciT130I CCWGG 3 cut(s) 1624, 1651, 1858
BclI TGATCA 1 cut(s) 1414
BcnI CCSGG 2 cut(s) 1958, 2069
BcoDI GTCTC 7 cut(s) 812, 863, 1561, 1708, 1922, 2292, 2502
BcuI ACTAGT 1 cut(s) 2675
BfaI CTAG 7 cut(s) 149, 656, 1449, 1688, 2139, 2651, 2676
BfmI CTRYAG 3 cut(s) 1533, 1692, 2553
BfoI RGCGCY 1 cut(s) 1139
BfrI CTTAAG 1 cut(s) 238
BfuAI ACCTGC 1 cut(s) 799
BglII AGATCT 3 cut(s) 1478, 1990, 2845
BisI GCNGC 8 cut(s) 78, 723, 994, 1079, 1681, 1692, 2442, 2451
BlsI GCNGC 8 cut(s) 79, 724, 995, 1080, 1682, 1693, 2443, 2452
BmcAI AGTACT 3 cut(s) 56, 1349, 2733
Bme1390I CCNGG 5 cut(s) 1624, 1651, 1858, 1958, 2069
Bme18I GGWCC 3 cut(s) 905, 1741, 2038
BmeT110I CYCGRG 2 cut(s) 335, 621
BmgT120I GGNCC 7 cut(s) 905, 1741, 1768, 1778, 1954, 2038, 2789
BmiI GGNNCC 4 cut(s) 246, 286, 1438, 2377
BmrFI CCNGG 5 cut(s) 1624, 1651, 1858, 1958, 2069
BmrI ACTGGG 1 cut(s) 2573
BmsI GCATC 9 cut(s) 466, 654, 938, 1365, 1453, 1803, 1960, 1999, 2849
BmtI GCTAGC 1 cut(s) 1691
BmuI ACTGGG 1 cut(s) 2573
BpiI GAAGAC 2 cut(s) 1259, 2070
BplI GAGNNNNNCTC 4 cut(s) 333, 365, 809, 841
BpmI CTGGAG 1 cut(s) 982
Bpu14I TTCGAA 1 cut(s) 1398
BpuEI CTTGAG 3 cut(s) 368, 1653, 2465
BpuMI CCSGG 2 cut(s) 1958, 2069
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 2 cut(s) 184, 1784
BsaBI GATNNNNATC 1 cut(s) 746
BsaHI GRCGYC 2 cut(s) 783, 2831
BsaI GGTCTC 1 cut(s) 863
BsaJI CCNNGG 2 cut(s) 1857, 1896
BsaWI WCCGGW 4 cut(s) 287, 1120, 2040, 2096
BsaXI ACNNNNNCTCC 2 cut(s) 2662, 2692
Bsc4I CCNNNNNNNGG 4 cut(s) 338, 1786, 2273, 2485
Bse118I RCCGGY 2 cut(s) 2040, 2096
Bse1I ACTGG 5 cut(s) 414, 999, 1431, 2579, 2607
Bse21I CCTNAGG 1 cut(s) 2318
Bse3DI GCAATG 4 cut(s) 615, 922, 1557, 2547
Bse8I GATNNNNATC 1 cut(s) 746
BseAI TCCGGA 2 cut(s) 287, 1120
BseBI CCWGG 3 cut(s) 1624, 1651, 1858
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 2 cut(s) 1857, 1896
BseGI GGATG 6 cut(s) 645, 768, 1380, 1503, 1794, 2014
BseJI GATNNNNATC 1 cut(s) 746
BseLI CCNNNNNNNGG 4 cut(s) 338, 1786, 2273, 2485
BseMI GCAATG 4 cut(s) 615, 922, 1557, 2547
BseMII CTCAG 7 cut(s) 75, 551, 1536, 1590, 1726, 1751, 2332
BseNI ACTGG 5 cut(s) 414, 999, 1431, 2579, 2607
BseRI GAGGAG 1 cut(s) 2529
BseXI GCAGC 6 cut(s) 734, 1065, 1678, 1692, 2453, 2462
BseYI CCCAGC 2 cut(s) 251, 1046
BsgI GTGCAG 2 cut(s) 1191, 1525
Bsh1236I CGCG 1 cut(s) 2648
Bsh1285I CGRYCG 1 cut(s) 2296
BshFI GGCC 8 cut(s) 208, 365, 1769, 1779, 1956, 2143, 2783, 2791
BshNI GGYRCC 2 cut(s) 1436, 2375
BshTI ACCGGT 2 cut(s) 2040, 2096
BshVI ATCGAT 1 cut(s) 120
BsiEI CGRYCG 1 cut(s) 2296
BsiHKAI GWGCWC 1 cut(s) 1952
BsiHKCI CYCGRG 2 cut(s) 335, 621
BsiSI CCGG 7 cut(s) 288, 1121, 1957, 1974, 2041, 2069, 2097
BsiWI CGTACG 1 cut(s) 734
BslFI GGGAC 6 cut(s) 95, 420, 1070, 2223, 2547, 2776
BslI CCNNNNNNNGG 4 cut(s) 338, 1786, 2273, 2485
BsmAI GTCTC 7 cut(s) 812, 863, 1561, 1708, 1922, 2292, 2502
BsmBI CGTCTC 1 cut(s) 812
BsmFI GGGAC 6 cut(s) 95, 420, 1070, 2223, 2547, 2776
BsnI GGCC 8 cut(s) 208, 365, 1769, 1779, 1956, 2143, 2783, 2791
Bso31I GGTCTC 1 cut(s) 863
BsoBI CYCGRG 2 cut(s) 335, 621
Bsp119I TTCGAA 1 cut(s) 1398
Bsp1286I GDGCHC 3 cut(s) 827, 1952, 2085
Bsp13I TCCGGA 2 cut(s) 287, 1120
BspACI CCGC 8 cut(s) 78, 757, 877, 994, 1814, 2136, 2217, 2656
BspANI GGCC 8 cut(s) 208, 365, 1769, 1779, 1956, 2143, 2783, 2791
BspCNI CTCAG 7 cut(s) 74, 550, 1535, 1589, 1725, 1750, 2331
BspDI ATCGAT 1 cut(s) 120
BspEI TCCGGA 2 cut(s) 287, 1120
BspFNI CGCG 1 cut(s) 2648
BspHI TCATGA 2 cut(s) 1935, 2461
BspLI GGNNCC 4 cut(s) 246, 286, 1438, 2377
BspMAI CTGCAG 1 cut(s) 1696
BspMI ACCTGC 1 cut(s) 799
BspOI GCTAGC 1 cut(s) 1691
BspPI GGATC 2 cut(s) 323, 2258
BspQI GCTCTTC 1 cut(s) 906
BspT104I TTCGAA 1 cut(s) 1398
BspT107I GGYRCC 2 cut(s) 1436, 2375
BspTI CTTAAG 1 cut(s) 238
BspTNI GGTCTC 1 cut(s) 863
BsrBI CCGCTC 2 cut(s) 996, 2656
BsrDI GCAATG 4 cut(s) 615, 922, 1557, 2547
BsrFI RCCGGY 2 cut(s) 2040, 2096
BsrI ACTGG 5 cut(s) 414, 999, 1431, 2579, 2607
BssAI RCCGGY 2 cut(s) 2040, 2096
BssECI CCNNGG 2 cut(s) 1857, 1896
BssNAI GTATAC 1 cut(s) 19
BssNI GRCGYC 2 cut(s) 783, 2831
BssSI CACGAG 1 cut(s) 667
BssT1I CCWWGG 1 cut(s) 1896
Bst1107I GTATAC 1 cut(s) 19
Bst2BI CACGAG 1 cut(s) 667
Bst2UI CCWGG 3 cut(s) 1624, 1651, 1858
Bst4CI ACNGT 9 cut(s) 262, 301, 793, 1534, 1745, 1880, 2294, 2717, 2731
Bst6I CTCTTC 2 cut(s) 483, 906
BstACI GRCGYC 2 cut(s) 783, 2831
BstAFI CTTAAG 1 cut(s) 238
BstAPI GCANNNNNTGC 1 cut(s) 1078
BstBAI YACGTR 2 cut(s) 184, 1784
BstBI TTCGAA 1 cut(s) 1398
BstDEI CTNAG 8 cut(s) 61, 537, 1356, 1522, 1576, 1712, 1737, 2318
BstENI CCTNNNNNAGG 1 cut(s) 2483
BstF5I GGATG 6 cut(s) 645, 768, 1380, 1503, 1794, 2014
BstFNI CGCG 1 cut(s) 2648
BstH2I RGCGCY 1 cut(s) 1139
BstHHI GCGC 8 cut(s) 35, 674, 929, 1021, 1138, 2614, 2650, 2692
BstMAI GTCTC 7 cut(s) 812, 863, 1561, 1708, 1922, 2292, 2502
BstMCI CGRYCG 1 cut(s) 2296
BstNI CCWGG 3 cut(s) 1624, 1651, 1858
BstNSI RCATGY 1 cut(s) 2407
BstSCI CCNGG 5 cut(s) 1622, 1649, 1856, 1956, 2067
BstSFI CTRYAG 3 cut(s) 1533, 1692, 2553
BstUI CGCG 1 cut(s) 2648
BstV1I GCAGC 6 cut(s) 734, 1065, 1678, 1692, 2453, 2462
BstV2I GAAGAC 2 cut(s) 1259, 2070
BstX2I RGATCY 3 cut(s) 1478, 1990, 2845
BstYI RGATCY 3 cut(s) 1478, 1990, 2845
BstZ17I GTATAC 1 cut(s) 19
Bsu15I ATCGAT 1 cut(s) 120
Bsu36I CCTNAGG 1 cut(s) 2318
BsuRI GGCC 8 cut(s) 208, 365, 1769, 1779, 1956, 2143, 2783, 2791
BsuTUI ATCGAT 1 cut(s) 120
BtgZI GCGATG 1 cut(s) 733
BtsCI GGATG 6 cut(s) 645, 768, 1380, 1503, 1794, 2014
BtsI GCAGTG 2 cut(s) 1722, 2037
BveI ACCTGC 1 cut(s) 799
CaiI CAGNNNCTG 2 cut(s) 80, 1078
CciI TCATGA 2 cut(s) 1935, 2461
CfoI GCGC 8 cut(s) 35, 674, 929, 1021, 1138, 2614, 2650, 2692
Cfr10I RCCGGY 2 cut(s) 2040, 2096
Cfr13I GGNCC 7 cut(s) 905, 1741, 1768, 1778, 1954, 2038, 2789
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 3 cut(s) 2007, 2654, 2839
CspAI ACCGGT 2 cut(s) 2040, 2096
DdeI CTNAG 8 cut(s) 61, 537, 1356, 1522, 1576, 1712, 1737, 2318
EaeI YGGCCR 2 cut(s) 363, 2781
Eam1104I CTCTTC 2 cut(s) 483, 906
EarI CTCTTC 2 cut(s) 483, 906
Eco130I CCWWGG 1 cut(s) 1896
Eco147I AGGCCT 1 cut(s) 2143
Eco24I GRGCYC 2 cut(s) 827, 2085
Eco31I GGTCTC 1 cut(s) 863
Eco47I GGWCC 3 cut(s) 905, 1741, 2038
Eco47III AGCGCT 1 cut(s) 1137
Eco57I CTGAAG 2 cut(s) 1135, 1971
Eco81I CCTNAGG 1 cut(s) 2318
Eco88I CYCGRG 2 cut(s) 335, 621
EcoNI CCTNNNNNAGG 1 cut(s) 2483
EcoO109I RGGNCCY 1 cut(s) 2789
EcoRI GAATTC 3 cut(s) 173, 188, 1426
EcoRII CCWGG 3 cut(s) 1622, 1649, 1856
EcoT14I CCWWGG 1 cut(s) 1896
EcoT22I ATGCAT 1 cut(s) 1192
EcoT38I GRGCYC 2 cut(s) 827, 2085
ErhI CCWWGG 1 cut(s) 1896
Esp3I CGTCTC 1 cut(s) 812
FalI AAGNNNNNCTT 4 cut(s) 696, 728, 1969, 2001
FaqI GGGAC 6 cut(s) 95, 420, 1070, 2223, 2547, 2776
FauI CCCGC 4 cut(s) 1807, 2143, 2210, 2649
FauNDI CATATG 1 cut(s) 1186
FbaI TGATCA 1 cut(s) 1414
FblI GTMKAC 1 cut(s) 18
Fnu4HI GCNGC 8 cut(s) 78, 723, 994, 1079, 1681, 1692, 2442, 2451
FokI GGATG 6 cut(s) 632, 755, 1387, 1510, 1781, 2021
FriOI GRGCYC 2 cut(s) 827, 2085
Fsp4HI GCNGC 8 cut(s) 78, 723, 994, 1079, 1681, 1692, 2442, 2451
FspBI CTAG 7 cut(s) 149, 656, 1449, 1688, 2139, 2651, 2676
FspI TGCGCA 2 cut(s) 928, 1020
GlaI GCGC 8 cut(s) 34, 673, 928, 1020, 1137, 2613, 2649, 2691
GluI GCNGC 8 cut(s) 78, 723, 994, 1079, 1681, 1692, 2442, 2451
GsaI CCCAGC 2 cut(s) 255, 1050
GsuI CTGGAG 1 cut(s) 982
HaeII RGCGCY 1 cut(s) 1139
HaeIII GGCC 8 cut(s) 208, 365, 1769, 1779, 1956, 2143, 2783, 2791
HapII CCGG 7 cut(s) 288, 1121, 1957, 1974, 2041, 2069, 2097
HgaI GACGC 3 cut(s) 2007, 2654, 2839
HhaI GCGC 8 cut(s) 35, 674, 929, 1021, 1138, 2614, 2650, 2692
Hin1I GRCGYC 2 cut(s) 783, 2831
Hin6I GCGC 8 cut(s) 33, 672, 927, 1019, 1136, 2612, 2648, 2690
HinP1I GCGC 8 cut(s) 33, 672, 927, 1019, 1136, 2612, 2648, 2690
HincII GTYRAC 2 cut(s) 1309, 2232
HindII GTYRAC 2 cut(s) 1309, 2232
HindIII AAGCTT 1 cut(s) 510
HpaI GTTAAC 1 cut(s) 1309
HpaII CCGG 7 cut(s) 288, 1121, 1957, 1974, 2041, 2069, 2097
HphI GGTGA 7 cut(s) 109, 424, 1486, 1502, 1846, 1957, 2671
Hpy166II GTNNAC 4 cut(s) 19, 1309, 2046, 2232
Hpy8I GTNNAC 4 cut(s) 19, 1309, 2046, 2232
Hpy99I CGWCG 2 cut(s) 742, 785
HpyAV CCTTC 8 cut(s) 131, 659, 1061, 1127, 1738, 1769, 2066, 2440
HpyCH4III ACNGT 9 cut(s) 262, 301, 793, 1534, 1745, 1880, 2294, 2717, 2731
HpyCH4IV ACGT 9 cut(s) 156, 183, 733, 783, 847, 1783, 1905, 2118, 2363
HpyF3I CTNAG 8 cut(s) 61, 537, 1356, 1522, 1576, 1712, 1737, 2318
HpySE526I ACGT 9 cut(s) 156, 183, 733, 783, 847, 1783, 1905, 2118, 2363
Hsp92I GRCGYC 2 cut(s) 783, 2831
HspAI GCGC 8 cut(s) 33, 672, 927, 1019, 1136, 2612, 2648, 2690
Kpn2I TCCGGA 2 cut(s) 287, 1120
KpnI GGTACC 1 cut(s) 2379
Ksp22I TGATCA 1 cut(s) 1414
KspAI GTTAAC 1 cut(s) 1309
LguI GCTCTTC 1 cut(s) 906
LmnI GCTCC 3 cut(s) 290, 691, 1001
Lsp1109I GCAGC 6 cut(s) 734, 1065, 1678, 1692, 2453, 2462
LweI GCATC 9 cut(s) 466, 654, 938, 1365, 1453, 1803, 1960, 1999, 2849
MaeI CTAG 7 cut(s) 149, 656, 1449, 1688, 2139, 2651, 2676
MaeII ACGT 9 cut(s) 156, 183, 733, 783, 847, 1783, 1905, 2118, 2363
MaeIII GTNAC 6 cut(s) 396, 1528, 1906, 2099, 2114, 2586
MbiI CCGCTC 2 cut(s) 996, 2656
MboII GAAGA 8 cut(s) 214, 485, 500, 644, 923, 1064, 1264, 2075
MflI RGATCY 3 cut(s) 1478, 1990, 2845
MhlI GDGCHC 3 cut(s) 827, 1952, 2085
MlsI TGGCCA 2 cut(s) 365, 2783
MluCI AATT 9 cut(s) 11, 173, 188, 526, 1426, 2108, 2286, 2423, 2855
MluNI TGGCCA 2 cut(s) 365, 2783
MlyI GAGTC 4 cut(s) 117, 674, 1446, 2758
MmeI TCCRAC 8 cut(s) 709, 868, 1731, 1822, 1986, 2016, 2388, 2607
Mox20I TGGCCA 2 cut(s) 365, 2783
Mph1103I ATGCAT 1 cut(s) 1192
MroI TCCGGA 2 cut(s) 287, 1120
MroXI GAANNNNTTC 1 cut(s) 56
MscI TGGCCA 2 cut(s) 365, 2783
MseI TTAA 5 cut(s) 239, 1308, 2246, 2270, 2327
Msp20I TGGCCA 2 cut(s) 365, 2783
MspA1I CMGCKG 4 cut(s) 80, 251, 725, 1526
MspCI CTTAAG 1 cut(s) 238
MspI CCGG 7 cut(s) 288, 1121, 1957, 1974, 2041, 2069, 2097
MspR9I CCNGG 5 cut(s) 1624, 1651, 1858, 1958, 2069
MvaI CCWGG 3 cut(s) 1624, 1651, 1858
MvnI CGCG 1 cut(s) 2648
NciI CCSGG 2 cut(s) 1958, 2069
NdeI CATATG 1 cut(s) 1186
NheI GCTAGC 1 cut(s) 1687
NlaIV GGNNCC 4 cut(s) 246, 286, 1438, 2377
NmuCI GTSAC 4 cut(s) 396, 1528, 1906, 2099
NsbI TGCGCA 2 cut(s) 928, 1020
NsiI ATGCAT 1 cut(s) 1192
NspI RCATGY 1 cut(s) 2407
NspV TTCGAA 1 cut(s) 1398
PagI TCATGA 2 cut(s) 1935, 2461
PceI AGGCCT 1 cut(s) 2143
PciSI GCTCTTC 1 cut(s) 906
PdmI GAANNNNTTC 1 cut(s) 56
PfeI GAWTC 6 cut(s) 100, 122, 346, 686, 1387, 2166
Pfl23II CGTACG 1 cut(s) 734
PfoI TCCNGGA 1 cut(s) 1649
PinAI ACCGGT 2 cut(s) 2040, 2096
PkrI GCNGC 8 cut(s) 79, 724, 995, 1080, 1682, 1693, 2443, 2452
PleI GAGTC 4 cut(s) 116, 674, 1446, 2758
PpsI GAGTC 4 cut(s) 116, 674, 1446, 2758
Ppu21I YACGTR 2 cut(s) 184, 1784
PshBI ATTAAT 1 cut(s) 2246
Psp1406I AACGTT 2 cut(s) 156, 2363
Psp6I CCWGG 3 cut(s) 1622, 1649, 1856
PspFI CCCAGC 2 cut(s) 251, 1046
PspGI CCWGG 3 cut(s) 1622, 1649, 1856
PspLI CGTACG 1 cut(s) 734
PspN4I GGNNCC 4 cut(s) 246, 286, 1438, 2377
PspPI GGNCC 7 cut(s) 905, 1741, 1768, 1778, 1954, 2038, 2789
PstI CTGCAG 1 cut(s) 1696
PstNI CAGNNNCTG 2 cut(s) 80, 1078
PsuI RGATCY 3 cut(s) 1478, 1990, 2845
PvuII CAGCTG 3 cut(s) 251, 725, 1526
SapI GCTCTTC 1 cut(s) 906
SaqAI TTAA 5 cut(s) 239, 1308, 2246, 2270, 2327
SatI GCNGC 8 cut(s) 78, 723, 994, 1079, 1681, 1692, 2442, 2451
Sau96I GGNCC 7 cut(s) 905, 1741, 1768, 1778, 1954, 2038, 2789
ScaI AGTACT 3 cut(s) 56, 1349, 2733
SchI GAGTC 4 cut(s) 117, 674, 1446, 2758
ScrFI CCNGG 5 cut(s) 1624, 1651, 1858, 1958, 2069
SduI GDGCHC 3 cut(s) 827, 1952, 2085
SfaNI GCATC 9 cut(s) 466, 654, 938, 1365, 1453, 1803, 1960, 1999, 2849
SfcI CTRYAG 3 cut(s) 1533, 1692, 2553
SfuI TTCGAA 1 cut(s) 1398
SinI GGWCC 3 cut(s) 905, 1741, 2038
SmlI CTYRAG 4 cut(s) 238, 383, 1668, 2480
SmoI CTYRAG 4 cut(s) 238, 383, 1668, 2480
SpeI ACTAGT 1 cut(s) 2675
Sse9I AATT 9 cut(s) 11, 173, 188, 526, 1426, 2108, 2286, 2423, 2855
SseBI AGGCCT 1 cut(s) 2143
SsiI CCGC 8 cut(s) 78, 757, 877, 994, 1814, 2136, 2217, 2656
SspMI CTAG 7 cut(s) 149, 656, 1449, 1688, 2139, 2651, 2676
StuI AGGCCT 1 cut(s) 2143
StyD4I CCNGG 5 cut(s) 1622, 1649, 1856, 1956, 2067
StyI CCWWGG 1 cut(s) 1896
TaaI ACNGT 9 cut(s) 262, 301, 793, 1534, 1745, 1880, 2294, 2717, 2731
TaiI ACGT 9 cut(s) 159, 186, 736, 786, 850, 1786, 1908, 2121, 2366
TaqI TCGA 9 cut(s) 120, 296, 1027, 1398, 1761, 2181, 2250, 2296, 2436
TasI AATT 9 cut(s) 11, 173, 188, 526, 1426, 2108, 2286, 2423, 2855
TatI WGTACW 4 cut(s) 54, 1347, 1591, 2731
TauI GCSGC 2 cut(s) 80, 996
TfiI GAWTC 6 cut(s) 100, 122, 346, 686, 1387, 2166
Tru1I TTAA 5 cut(s) 239, 1308, 2246, 2270, 2327
Tru9I TTAA 5 cut(s) 239, 1308, 2246, 2270, 2327
TseFI GTSAC 4 cut(s) 396, 1528, 1906, 2099
TseI GCWGC 6 cut(s) 722, 1078, 1680, 1691, 2441, 2450
Tsp45I GTSAC 4 cut(s) 396, 1528, 1906, 2099
TspDTI ATGAA 7 cut(s) 520, 675, 1023, 1689, 1924, 2458, 2490
TspGWI ACGGA 1 cut(s) 2011
Vha464I CTTAAG 1 cut(s) 238
VpaK11BI GGWCC 3 cut(s) 905, 1741, 2038
VspI ATTAAT 1 cut(s) 2246
XagI CCTNNNNNAGG 1 cut(s) 2483
XapI RAATTY 4 cut(s) 173, 188, 1426, 2108
XbaI TCTAGA 2 cut(s) 655, 1448
XceI RCATGY 1 cut(s) 2407
XcmI CCANNNNNNNNNTGG 2 cut(s) 673, 851
XmiI GTMKAC 1 cut(s) 18
XmnI GAANNNNTTC 1 cut(s) 56
XspI CTAG 7 cut(s) 149, 656, 1449, 1688, 2139, 2651, 2676
ZraI GACGTC 1 cut(s) 784
ZrmI AGTACT 3 cut(s) 56, 1349, 2733
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.