RchiOBHm_Chr2g0169851

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000317
Physical Location & Seq
Forward (+)
83980489 .. 83982902
2414 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53741

Sequence Viewer

Length: 1773 bp
ATGGTTGGTGAGAGAGGTATTCAGATTTCGGGAGGACAGAAGCAAAGAATAGCCATTGCACGAGCGATCATCAAGAAACCACGAATACTCCTTCTAGATGAAGCCACCAGTGCGTTAGACTCCGAATCGGAGCGTGTAGTCCAAGAAGCTCTGGACAAAGCAGCGGTGGGACGTACGACCATCATCATCGCCCACCGCCTCTCCACCATCCGAAACGCCGACGTCATTGTTGTCGTTCAAAACGGGCAGGTCATGGAGACAGGCTCACACGACGAACTATTCCAACGTGAAAATGGCCTCTACACTTCGCTTGTCCGTTTACAACAAACAGATCAAGCACATTCTATTTCAAACATGGACATTCATGACACGAGCAGTCGTAGGCTTTCGATGGTTAGCCTTTCGAGTTCTGCCAACACATTTGAGGGTCGAGCTTCGTCGGTTCATGGTGGGGAAGATGACACCGTAGAAGTTAAGAAGCTGCCTGTCCCGTCTTTTCAAAGATTGATGGCTTTGAACCTTCCGGAGTGGAAACAAGCGCTTTTGGGGTGCTTCGGTGCGATATTGTTCGGTGCAGTTCAGCCGCTGTTTGCATTCACTCTGGGGTCGACGGTGTCAGTTTACTTCTTGGCGGAGCACGATGAGATCAAGGAGAAGACAAGAATCTATTCTCTGTGTTTTGTTGGGTTGGCTATTCTCTCCTTTCTAGTCAACCTTTGCCAGCATTACAACTTTGCCTACATGGGAGAGTACTTGACTAAGAGAATTAGAGAGAAGATGCTTTCAAAGATACTTACATTTGAAGCTGGGTGGTTTGATCAGGATGAGAATTCCAGTGGTGCCATATGCTCTAGACTCGCCAAATTAAGAAGCCAATGTAGTACATCTTTAGTGGGTGATCGGCTTTCTCTACTTGTACAAACCTTCTCAGCTGTGACAGTAGCAGGCACAATGGGTTTGGTCATTGCATGTAGGCTGGCCTCAGTTATGATAGCACTTCAACCCATCACTATTCTGTGCTTCTACACCAGGTGTATCCTTCTCCAAAGCATGTCAAGCAAAGCCACCAAAGCTCAAGATGAAAGTAGCAAGCTAGCTGCAGAGGCAGTCTCCAACCTCAGAACCATCACTGCTTTCTCGTCTCAAGACCGCCTGTTGAAAATGCTAGAAAAGGCCCAAGAAGGCCCGCGTAAGGAGAGCATTCGACAATCATGGTTTGCGGGTATTGCTCTTGGTTGTTCTCAAGGTCTTAACACTATCACCTGGGCTTTTGACTTTTGGTACGGAGGCAAGCTCGTCGCCAAGGGCTACATAACTGCGAAAGCACTGTTTCGGACGGACATGATATTGCTGAGCACGGGTCGGGTCATTGCGGAAGACCTTGTGAAAGGCTCGGACGCTGTTGCGTCCGTATTTGACGTGTTGGACCGGTACACAAATATAGAACCGGAAGACCCGGAAGGTTGCAAGCCCAAAAGTATAACGGGTCATATAGAACTTCATGACATATATTTTGCGTACCCCACTAGGCCCGATGTGATGATCTTGAAGGGATTCTCAATAAATATCGAAGCGAGAAAATCAACAGCTTTGGTGGGAAAAAGTGGGTCCGGAAAATCAACAATCATCGGATTAATTGAGAGATTTTACGATCCACTCAAAGGAGAAGTAAGAATCGATGGTCGAGATATAAAGTCGTACCATCTCAGGACGTTAAGGAAACACATAGCCTTGGTTAGCCAAGAGCCAACATTATTTTCAGGCACCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

590

Amino Acids

65.08

Weight (kDa)

8.75

Isoelectric Point (pI)

37.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 3 - 37 3.1e-09 ABC transporter
ABC_membrane PF00664 181 - 444 4.1e-42 ABC transporter transmembrane region
ABC_tran PF00005 516 - 588 4.7e-15 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 225
Acc36I ACCTGC 1 cut(s) 238
AccB1I GGYRCC 2 cut(s) 839, 1763
AccI GTMKAC 1 cut(s) 608
AccII CGCG 1 cut(s) 1189
AccIII TCCGGA 2 cut(s) 523, 1610
AciI CCGC 8 cut(s) 164, 196, 584, 632, 1150, 1187, 1220, 1373
AclWI GGATC 1 cut(s) 1646
AcsI RAATTY 1 cut(s) 829
AcyI GRCGYC 1 cut(s) 222
AdeI CACNNNGTG 1 cut(s) 1032
AfaI GTAC 8 cut(s) 175, 752, 883, 918, 1283, 1433, 1520, 1700
AfeI AGCGCT 1 cut(s) 540
AfiI CCNNNNNNNGG 2 cut(s) 1192, 1661
AflIII ACRYGT 1 cut(s) 1419
AgeI ACCGGT 1 cut(s) 1428
AgsI TTSAA 9 cut(s) 239, 351, 500, 517, 786, 803, 1001, 1159, 1549
AjiI CACGTC 1 cut(s) 1420
AjnI CCWGG 2 cut(s) 1028, 1262
AjuI GAANNNNNNNTTGG 2 cut(s) 1741, 1773
Alw21I GWGCWC 2 cut(s) 639, 1358
Alw26I GTCTC 3 cut(s) 251, 1114, 1146
AlwI GGATC 1 cut(s) 1646
AlwNI CAGNNNCTG 1 cut(s) 586
Aor13HI TCCGGA 2 cut(s) 523, 1610
Aor51HI AGCGCT 1 cut(s) 540
AoxI GGCC 5 cut(s) 295, 978, 1173, 1183, 1529
ApeKI GCWGC 3 cut(s) 161, 481, 1097
ApoI RAATTY 1 cut(s) 829
ArsI GACNNNNNNTTYG 2 cut(s) 1496, 1528
AseI ATTAAT 1 cut(s) 1634
AsiGI ACCGGT 1 cut(s) 1428
Asp700I GAANNNNTTC 2 cut(s) 667, 1553
AspLEI GCGC 1 cut(s) 541
AspS9I GGNCC 5 cut(s) 1174, 1184, 1426, 1530, 1608
AsuC2I CCSGG 1 cut(s) 1457
AsuHPI GGTGA 3 cut(s) 20, 908, 1252
AsuNHI GCTAGC 1 cut(s) 1093
AvaII GGWCC 2 cut(s) 1426, 1608
BanI GGYRCC 2 cut(s) 839, 1763
BauI CACGAG 2 cut(s) 60, 370
BbsI GAAGAC 3 cut(s) 662, 1383, 1458
Bbv12I GWGCWC 2 cut(s) 639, 1358
BbvI GCAGC 3 cut(s) 173, 468, 1084
BccI CCATC 8 cut(s) 188, 215, 385, 502, 1013, 1133, 1673, 1710
BcgI CGANNNNNNTGC 2 cut(s) 1279, 1313
BciT130I CCWGG 2 cut(s) 1030, 1264
BciVI GTATCC 1 cut(s) 1046
BclI TGATCA 1 cut(s) 817
BcnI CCSGG 1 cut(s) 1457
BcoDI GTCTC 3 cut(s) 251, 1114, 1146
BfaI CTAG 6 cut(s) 95, 707, 852, 1094, 1166, 1527
BfmI CTRYAG 1 cut(s) 1098
BfoI RGCGCY 1 cut(s) 542
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 1 cut(s) 1046
BisI GCNGC 4 cut(s) 162, 482, 584, 1098
BlpI GCTNAGC 1 cut(s) 1352
BlsI GCNGC 4 cut(s) 163, 483, 585, 1099
BmcAI AGTACT 1 cut(s) 752
Bme1390I CCNGG 3 cut(s) 1030, 1264, 1457
Bme18I GGWCC 2 cut(s) 1426, 1608
BmgBI CACGTC 1 cut(s) 1420
BmgT120I GGNCC 5 cut(s) 1174, 1184, 1426, 1530, 1608
BmiI GGNNCC 3 cut(s) 841, 1609, 1765
BmrFI CCNGG 3 cut(s) 1030, 1264, 1457
BmsI GCATC 1 cut(s) 768
BmtI GCTAGC 1 cut(s) 1097
BpiI GAAGAC 3 cut(s) 662, 1383, 1458
BplI GAGNNNNNCTC 6 cut(s) 248, 280, 1094, 1126, 1278, 1310
Bpu1102I GCTNAGC 1 cut(s) 1352
BpuEI CTTGAG 3 cut(s) 1059, 1128, 1227
BpuMI CCSGG 1 cut(s) 1457
Bsa29I ATCGAT 1 cut(s) 1677
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 3 cut(s) 1263, 1302, 1731
BsaWI WCCGGW 4 cut(s) 523, 1428, 1447, 1610
BsaXI ACNNNNNCTCC 4 cut(s) 72, 102, 185, 215
Bsc4I CCNNNNNNNGG 2 cut(s) 1192, 1661
Bse118I RCCGGY 1 cut(s) 1428
Bse1I ACTGG 2 cut(s) 108, 834
Bse3DI GCAATG 3 cut(s) 54, 963, 1368
BseAI TCCGGA 2 cut(s) 523, 1610
BseBI CCWGG 2 cut(s) 1030, 1264
BseCI ATCGAT 1 cut(s) 1677
BseDI CCNNGG 3 cut(s) 1263, 1302, 1731
BseGI GGATG 2 cut(s) 207, 829
BseLI CCNNNNNNNGG 2 cut(s) 1192, 1661
BseMI GCAATG 3 cut(s) 54, 963, 1368
BseMII CTCAG 5 cut(s) 942, 996, 1132, 1343, 1720
BseNI ACTGG 2 cut(s) 108, 834
BseXI GCAGC 3 cut(s) 173, 468, 1084
BseYI CCCAGC 1 cut(s) 806
BsgI GTGCAG 1 cut(s) 594
Bsh1236I CGCG 1 cut(s) 1189
BshFI GGCC 5 cut(s) 297, 980, 1175, 1185, 1531
BshNI GGYRCC 2 cut(s) 839, 1763
BshTI ACCGGT 1 cut(s) 1428
BshVI ATCGAT 1 cut(s) 1677
BsiHKAI GWGCWC 2 cut(s) 639, 1358
BsiSI CCGG 5 cut(s) 524, 1429, 1448, 1457, 1611
BsiWI CGTACG 1 cut(s) 173
BslFI GGGAC 2 cut(s) 183, 473
BslI CCNNNNNNNGG 2 cut(s) 1192, 1661
BsmAI GTCTC 3 cut(s) 251, 1114, 1146
BsmBI CGTCTC 1 cut(s) 1146
BsmFI GGGAC 2 cut(s) 183, 473
BsmI GAATGC 2 cut(s) 593, 1200
BsnI GGCC 5 cut(s) 297, 980, 1175, 1185, 1531
Bsp1286I GDGCHC 2 cut(s) 639, 1358
Bsp13I TCCGGA 2 cut(s) 523, 1610
Bsp1407I TGTACA 1 cut(s) 916
Bsp143I GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
Bsp1720I GCTNAGC 1 cut(s) 1352
BspACI CCGC 8 cut(s) 164, 196, 584, 632, 1150, 1187, 1220, 1373
BspANI GGCC 5 cut(s) 297, 980, 1175, 1185, 1531
BspCNI CTCAG 5 cut(s) 941, 995, 1131, 1344, 1719
BspDI ATCGAT 1 cut(s) 1677
BspEI TCCGGA 2 cut(s) 523, 1610
BspFNI CGCG 1 cut(s) 1189
BspHI TCATGA 2 cut(s) 364, 1501
BspLI GGNNCC 3 cut(s) 841, 1609, 1765
BspMAI CTGCAG 1 cut(s) 1102
BspMI ACCTGC 1 cut(s) 238
BspOI GCTAGC 1 cut(s) 1097
BspPI GGATC 1 cut(s) 1646
BspT107I GGYRCC 2 cut(s) 839, 1763
BsrDI GCAATG 3 cut(s) 54, 963, 1368
BsrFI RCCGGY 1 cut(s) 1428
BsrGI TGTACA 1 cut(s) 916
BsrI ACTGG 2 cut(s) 108, 834
BssAI RCCGGY 1 cut(s) 1428
BssECI CCNNGG 3 cut(s) 1263, 1302, 1731
BssMI GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
BssNI GRCGYC 1 cut(s) 222
BssSI CACGAG 2 cut(s) 60, 370
BssT1I CCWWGG 2 cut(s) 1302, 1731
Bst2BI CACGAG 2 cut(s) 60, 370
Bst2UI CCWGG 2 cut(s) 1030, 1264
Bst4CI ACNGT 4 cut(s) 466, 613, 940, 1329
BstACI GRCGYC 1 cut(s) 222
BstAUI TGTACA 1 cut(s) 916
BstC8I GCNNGC 8 cut(s) 722, 946, 978, 1091, 1095, 1187, 1292, 1469
BstDEI CTNAG 6 cut(s) 759, 928, 982, 1118, 1352, 1706
BstF5I GGATG 2 cut(s) 207, 829
BstFNI CGCG 1 cut(s) 1189
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 1 cut(s) 541
BstKTI GATC 7 cut(s) 69, 334, 648, 820, 901, 1545, 1654
BstMAI GTCTC 3 cut(s) 251, 1114, 1146
BstMBI GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
BstMWI GCNNNNNNNGC 5 cut(s) 110, 1056, 1070, 1103, 1226
BstNI CCWGG 2 cut(s) 1030, 1264
BstNSI RCATGY 2 cut(s) 972, 1054
BstSCI CCNGG 3 cut(s) 1028, 1262, 1455
BstSFI CTRYAG 1 cut(s) 1098
BstUI CGCG 1 cut(s) 1189
BstV1I GCAGC 3 cut(s) 173, 468, 1084
BstV2I GAAGAC 3 cut(s) 662, 1383, 1458
Bsu15I ATCGAT 1 cut(s) 1677
BsuI GTATCC 1 cut(s) 1046
BsuRI GGCC 5 cut(s) 297, 980, 1175, 1185, 1531
BsuTUI ATCGAT 1 cut(s) 1677
BtgZI GCGATG 1 cut(s) 172
BtrI CACGTC 1 cut(s) 1420
BtsCI GGATG 2 cut(s) 207, 829
BtsI GCAGTG 1 cut(s) 1128
BtsIMutI CAGTG 4 cut(s) 115, 841, 1128, 1325
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 8 cut(s) 722, 946, 978, 1091, 1095, 1187, 1292, 1469
CaiI CAGNNNCTG 1 cut(s) 586
CciI TCATGA 2 cut(s) 364, 1501
CfoI GCGC 1 cut(s) 541
Cfr10I RCCGGY 1 cut(s) 1428
Cfr13I GGNCC 5 cut(s) 1174, 1184, 1426, 1530, 1608
ClaI ATCGAT 1 cut(s) 1677
CseI GACGC 2 cut(s) 1395, 1406
CsiI ACCWGGT 1 cut(s) 1028
Csp6I GTAC 8 cut(s) 174, 751, 882, 917, 1282, 1432, 1519, 1699
CspAI ACCGGT 1 cut(s) 1428
CviQI GTAC 8 cut(s) 174, 751, 882, 917, 1282, 1432, 1519, 1699
DdeI CTNAG 6 cut(s) 759, 928, 982, 1118, 1352, 1706
DpnI GATC 7 cut(s) 68, 333, 647, 819, 900, 1544, 1653
DpnII GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
DraIII CACNNNGTG 1 cut(s) 1032
EciI GGCGGA 1 cut(s) 647
Eco130I CCWWGG 2 cut(s) 1302, 1731
Eco47I GGWCC 2 cut(s) 1426, 1608
Eco47III AGCGCT 1 cut(s) 540
EcoRI GAATTC 1 cut(s) 829
EcoRII CCWGG 2 cut(s) 1028, 1262
EcoT14I CCWWGG 2 cut(s) 1302, 1731
ErhI CCWWGG 2 cut(s) 1302, 1731
Esp3I CGTCTC 1 cut(s) 1146
FaqI GGGAC 2 cut(s) 183, 473
FauI CCCGC 2 cut(s) 1194, 1213
FauNDI CATATG 1 cut(s) 845
FbaI TGATCA 1 cut(s) 817
FblI GTMKAC 1 cut(s) 608
Fnu4HI GCNGC 4 cut(s) 162, 482, 584, 1098
FokI GGATG 2 cut(s) 194, 836
Fsp4HI GCNGC 4 cut(s) 162, 482, 584, 1098
FspBI CTAG 6 cut(s) 95, 707, 852, 1094, 1166, 1527
GlaI GCGC 1 cut(s) 540
GluI GCNGC 4 cut(s) 162, 482, 584, 1098
GsaI CCCAGC 1 cut(s) 810
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 5 cut(s) 297, 980, 1175, 1185, 1531
HapII CCGG 5 cut(s) 524, 1429, 1448, 1457, 1611
HgaI GACGC 2 cut(s) 1395, 1406
HhaI GCGC 1 cut(s) 541
Hin1I GRCGYC 1 cut(s) 222
Hin6I GCGC 1 cut(s) 539
HinP1I GCGC 1 cut(s) 539
HincII GTYRAC 2 cut(s) 609, 712
HindII GTYRAC 2 cut(s) 609, 712
HinfI GANTC 6 cut(s) 119, 125, 663, 855, 1554, 1674
HpaII CCGG 5 cut(s) 524, 1429, 1448, 1457, 1611
HphI GGTGA 3 cut(s) 20, 908, 1252
Hpy166II GTNNAC 5 cut(s) 320, 609, 622, 712, 1434
Hpy188I TCNGA 8 cut(s) 24, 124, 130, 212, 1121, 1335, 1396, 1631
Hpy8I GTNNAC 5 cut(s) 320, 609, 622, 712, 1434
Hpy99I CGWCG 5 cut(s) 224, 275, 442, 613, 1301
HpyAV CCTTC 7 cut(s) 101, 530, 934, 1049, 1175, 1454, 1543
HpyCH4III ACNGT 4 cut(s) 466, 613, 940, 1329
HpyCH4IV ACGT 5 cut(s) 172, 222, 286, 1419, 1712
HpyCH4V TGCA 6 cut(s) 59, 575, 593, 968, 1100, 1467
HpyF10VI GCNNNNNNNGC 5 cut(s) 110, 1056, 1070, 1103, 1226
HpyF3I CTNAG 6 cut(s) 759, 928, 982, 1118, 1352, 1706
HpySE526I ACGT 5 cut(s) 172, 222, 286, 1419, 1712
Hsp92I GRCGYC 1 cut(s) 222
HspAI GCGC 1 cut(s) 539
Kpn2I TCCGGA 2 cut(s) 523, 1610
Ksp22I TGATCA 1 cut(s) 817
Kzo9I GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
LmnI GCTCC 2 cut(s) 130, 634
Lsp1109I GCAGC 3 cut(s) 173, 468, 1084
LweI GCATC 1 cut(s) 768
MabI ACCWGGT 1 cut(s) 1028
MaeI CTAG 6 cut(s) 95, 707, 852, 1094, 1166, 1527
MaeII ACGT 5 cut(s) 172, 222, 286, 1419, 1712
MaeIII GTNAC 1 cut(s) 934
MalI GATC 7 cut(s) 68, 333, 647, 819, 900, 1544, 1653
MboI GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
MboII GAAGA 5 cut(s) 467, 667, 787, 1388, 1463
MhlI GDGCHC 2 cut(s) 639, 1358
MluCI AATT 4 cut(s) 765, 829, 863, 1635
MlyI GAGTC 2 cut(s) 113, 849
MmeI TCCRAC 3 cut(s) 307, 1137, 1404
MnlI CCTC 9 cut(s) 8, 26, 209, 308, 418, 991, 1096, 1127, 1280
MroI TCCGGA 2 cut(s) 523, 1610
MroXI GAANNNNTTC 2 cut(s) 667, 1553
MseI TTAA 5 cut(s) 474, 866, 1251, 1634, 1715
MspA1I CMGCKG 3 cut(s) 164, 586, 932
MspI CCGG 5 cut(s) 524, 1429, 1448, 1457, 1611
MspR9I CCNGG 3 cut(s) 1030, 1264, 1457
Mva1269I GAATGC 2 cut(s) 593, 1200
MvaI CCWGG 2 cut(s) 1030, 1264
MvnI CGCG 1 cut(s) 1189
MwoI GCNNNNNNNGC 5 cut(s) 110, 1056, 1070, 1103, 1226
NciI CCSGG 1 cut(s) 1457
NdeI CATATG 1 cut(s) 845
NdeII GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
NheI GCTAGC 1 cut(s) 1093
NlaIV GGNNCC 3 cut(s) 841, 1609, 1765
NmuCI GTSAC 1 cut(s) 934
NspI RCATGY 2 cut(s) 972, 1054
PagI TCATGA 2 cut(s) 364, 1501
PctI GAATGC 2 cut(s) 593, 1200
PdmI GAANNNNTTC 2 cut(s) 667, 1553
PfeI GAWTC 4 cut(s) 125, 663, 1554, 1674
Pfl23II CGTACG 1 cut(s) 173
PflFI GACNNNGTC 1 cut(s) 613
PinAI ACCGGT 1 cut(s) 1428
PkrI GCNGC 4 cut(s) 163, 483, 585, 1099
PleI GAGTC 2 cut(s) 113, 849
PpsI GAGTC 2 cut(s) 113, 849
PshBI ATTAAT 1 cut(s) 1634
Psp6I CCWGG 2 cut(s) 1028, 1262
PspFI CCCAGC 1 cut(s) 806
PspGI CCWGG 2 cut(s) 1028, 1262
PspLI CGTACG 1 cut(s) 173
PspN4I GGNNCC 3 cut(s) 841, 1609, 1765
PspPI GGNCC 5 cut(s) 1174, 1184, 1426, 1530, 1608
PstI CTGCAG 1 cut(s) 1102
PstNI CAGNNNCTG 1 cut(s) 586
PsyI GACNNNGTC 1 cut(s) 613
PvuII CAGCTG 1 cut(s) 932
RsaI GTAC 8 cut(s) 175, 752, 883, 918, 1283, 1433, 1520, 1700
RsaNI GTAC 8 cut(s) 174, 751, 882, 917, 1282, 1432, 1519, 1699
SalI GTCGAC 1 cut(s) 607
SaqAI TTAA 5 cut(s) 474, 866, 1251, 1634, 1715
SatI GCNGC 4 cut(s) 162, 482, 584, 1098
Sau3AI GATC 7 cut(s) 66, 331, 645, 817, 898, 1542, 1651
Sau96I GGNCC 5 cut(s) 1174, 1184, 1426, 1530, 1608
ScaI AGTACT 1 cut(s) 752
SchI GAGTC 2 cut(s) 113, 849
ScrFI CCNGG 3 cut(s) 1030, 1264, 1457
SduI GDGCHC 2 cut(s) 639, 1358
SexAI ACCWGGT 1 cut(s) 1028
SfaNI GCATC 1 cut(s) 768
SfcI CTRYAG 1 cut(s) 1098
SinI GGWCC 2 cut(s) 1426, 1608
SmlI CTYRAG 3 cut(s) 1074, 1143, 1242
SmoI CTYRAG 3 cut(s) 1074, 1143, 1242
Sse9I AATT 4 cut(s) 765, 829, 863, 1635
SsiI CCGC 8 cut(s) 164, 196, 584, 632, 1150, 1187, 1220, 1373
SspMI CTAG 6 cut(s) 95, 707, 852, 1094, 1166, 1527
StyD4I CCNGG 3 cut(s) 1028, 1262, 1455
StyI CCWWGG 2 cut(s) 1302, 1731
TaaI ACNGT 4 cut(s) 466, 613, 940, 1329
TaiI ACGT 5 cut(s) 175, 225, 289, 1422, 1715
TaqI TCGA 8 cut(s) 389, 404, 430, 608, 1204, 1569, 1677, 1684
TasI AATT 4 cut(s) 765, 829, 863, 1635
TatI WGTACW 3 cut(s) 750, 881, 916
TauI GCSGC 1 cut(s) 586
TfiI GAWTC 4 cut(s) 125, 663, 1554, 1674
Tru1I TTAA 5 cut(s) 474, 866, 1251, 1634, 1715
Tru9I TTAA 5 cut(s) 474, 866, 1251, 1634, 1715
TscAI CASTG 4 cut(s) 115, 841, 1135, 1332
TseFI GTSAC 1 cut(s) 934
TseI GCWGC 3 cut(s) 161, 481, 1097
Tsp45I GTSAC 1 cut(s) 934
TspDTI ATGAA 5 cut(s) 114, 353, 434, 1095, 1490
TspGWI ACGGA 4 cut(s) 305, 1299, 1352, 1399
TspRI CASTG 4 cut(s) 115, 841, 1135, 1332
Tth111I GACNNNGTC 1 cut(s) 613
VpaK11BI GGWCC 2 cut(s) 1426, 1608
VspI ATTAAT 1 cut(s) 1634
XapI RAATTY 1 cut(s) 829
XbaI TCTAGA 2 cut(s) 94, 851
XceI RCATGY 2 cut(s) 972, 1054
XcmI CCANNNNNNNNNTGG 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 608
XmnI GAANNNNTTC 2 cut(s) 667, 1553
XspI CTAG 6 cut(s) 95, 707, 852, 1094, 1166, 1527
ZraI GACGTC 1 cut(s) 223
ZrmI AGTACT 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.