Prupe.3G275900_v2.0.a1

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000317
Physical Location & Seq
Forward (+)
25411135 .. 25415909
4775 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G275900.1

Sequence Viewer

Length: 3714 bp
ATGAGCAGTTCAGAGAAAACTAGTTATGAAGTAGAGAAGAAGAAGAAGAAAAATGGGTCAATAAGGTCCATTTTCATGCATGCGGATGGAGTTGACAAGTGGTTGATGACACTGGGGTTGCTTGGAGCCATAGGCGATGGCTTCACTTCACGTCTGGTGATTGTTTTATGTAGCCGGGTGATAAACAATATGGGCAGAGCAGACAGAGCTGGAGCCTCAGATTTGGATGCACGTAATTTGCGCCATAACATCAATAAGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGACCTTCTCATTGTTCACATTCACACATGCACAAACACTGAAAAGATGCAGAAAAAGCTAATCACAATCTTTGGATTTTGTTGTGGATGGCCTCATGCAGAACGGAATGCTAGCGTTTGTGTACTTAGCTTTGGCCTCATGGGTTGCTTGCTTCTTAGGTACGTGCCAGATTTTGTAAGCAAAGTGTCTACGTTCGTTGCGGGTTACACGGTAGCATTTTTCATAGTGTGGGAACTGGCTATGTTGGGGCTCCCATTTTCCTTGCTTCTGGTAGTTCCTGGTTGGATTTGTGGAAGAACTTTAACAGAACTAGCAAAAAAGAGAAGAGAAGAGTGCATTAAAGCTGGGACAATAGCAGAGCAGGCAATATCTTCCATTAGGACTGTTTATGCATTTGTTGGAGAGAACAATACCATTCAAAAATTCTCTGCAGCTCTACATGGAACTATTAAGTTGGGGTTGAGGCAAGGCTTGGTTAAAGGCTTGGCCATTGGTAGCTCTGGCACTATCTTTTCCATTTGGGCTGTCATGTCTTACTCTGGTAGCAGAATGATTATATACCACGGCGCGCTCGGAGGAAATGTTTTAGCAGTTGGCGTCTCAATAGTCAATGGGGGATTGGCAATGGGTTCTGCTTTATCAAATCTCAAGTACATAACTGAAGCATGTTCAGCTGGCGAGCGTATTATGGAAGTTACAAAACTAGTTCCCCAGATTGATTCAGACAACATGGGAGGCAAAATTCTGGAAAATTTTTCAAGTGAAGTTGAATTTAAACAGGTCAAGTTTGCCTACCCATCAAGGCCTGATGGCATCATACTAAACAACTTTTGCCTAAACATACCAGCAGGAAAGACAGTTGCTTTGGTAGGTCCTAGTGGCTCAGGAAAATCCACAGTGATTTCACTGTTGCAAAGGTTTTATGACCCTCTTGAGGGAGAGATTTCTCTAGATGGGATTGCCATTGATAAGCTGCAGCTCAAGTGGCTAAGATCACAAATGGCAGCAGTAAGCCAAGAGCCTTCTCTGTTCTCAACCACCATTAAGGAGAATATACTCTTTGGCAAGGAAGATGGTACAAGTGAGGAAGTAATTGAGGCTGCCAAAGCTAGCAATGCTCATAATTTCATATCTCAGCTGCCTCAAGGATATGATACCCAGGTTGGTGAGAGGGGCATTCAAGTGTCAGGAGGACAGAAGCAGAGGATTGCCATCGCAAGAGCATTAGTTGGAAAACCCAAGATCCTTCTTCTTGATGAGGCCACCAGCGCATTAGACTCTGAGTCAGAGAGGCTTGTTCAAGAGGCTCTCTACAAGGCAGCCATGGGCAGAACAACCATAGTCATCGCACACCGCCTGTCCACCATTCGAAACGCCGACGTTATTGCCGTCATGCAAAATGGTAGCGTCACAGAAACTGGCTCACACGACGAGCTAATACAAAACCAAAATGGGCTTTACGCATCATTTGTCCGTCTCCAACAAATTCCAAAAGAAACTTCAGAAGATCAATGTCACTGCAACAACAGTATAAATAGTCCCGCTCTTCCATCATCTGCGAGCCAATTGAATTCGACCCCCCAGGACGCTGGATTGGACTGTACTGCTGCTACTGCTAAAGAAAATCCAAACAACATGATCAAACCCAGAGCTTCATTGTGGAGATTGATGTCTATGAGTCTTCCAGAATGGAAGCAAGCGATTTTAGGGTGTTTGAGTGCTGTTCTTTTCGGAGCGGTTCAGCCGGTGTACGGATTCGTCATGGGGACCACGATATCAGTGTTTTTCTTGACAAATCATGATGAGATGGAAGAGAAAATAAGGACTTTTGCGTTGTGTTTTTTTGGGCTCTCCGTTTTCTCAATGCTGATTAATATCATCCAGCATTACAACTTCGCTTACATGGGAGAGCTCTTGACCAATCGGATTAGGGAGATGCTGCTTTCAAAGATATTCACTTTTGAAGTTGAATGGTTCGAGCACCGACAAAACTCCAGCGGTGCCATTTGCTCTAGGCTCACCAAAGAAGCTGAAATGGTGAGATCCTTAGTGGGTGATAGAATGGGTCTCCTTATACAAACCATCTCAGGCGTCGCCATAGCATGGACAATGGGGCTAATAATAGCATGGAGACTTGCCGTGGTCATTATTGCCGTCCAACCCATAGTCATTGCCAGCCTGTATGCAAAGCGAGTCCTACTCAAAACAACGTCCACAAAAGCCATTAAAGCCCAAGAGGAAAGTTGCAAGCTTGCTGCCGAGGCAGTCTCCAACATCCGCACCATCACTGCCTTCTCAGCCCAGAACACAATTCTGAAGATGCTAGAAAAGGCCCAAGAAGGCCCACGTAGAGAGAGCATGAGACAGTCGTGGGTCGCGGGTATTGGGCTCGGGTTTGCCCAGTGCATCACAATTCTCAATTGGGGTGTCAGCTTTTTGTGGGGAGGCATGCTTGTCAACAAGGGCCATGTCACAGCAAGAGCAGTCTTTGAAACCATCACAATTTTGGTCACCACCGGCCGAACCATAGCCGATGCTGGAAGTATGACATCAGACCTTGCCATGGGTTTGTATGCAATCGGGTCCATTTATAGTATCTTGGACCGGACCACAAAAATGGAGCCCCAAGTTCCTCAAGAGAAGCAAGTAGAAAACATAACGGGTCAAATTCAATTTCGTGACGTGGATTTTGCATACCCAACTAGACCCAATGCGTTGATCTTCCAACGCTTTTCGACTGAGATGGAAGCAGGAAAATCTACGGCGTTGGTGGGACAAAGTGGGTCAGGCAAATCGACCATCATCGGATTAATTGAGAGATTCTACGATCCAATCAAAGGAGTGGTGGAAATGGACGGCCGAGATTTAAAGACGTACAACCTTAGATCGTTGCGGAAACACATGGCGTTAGTCAGCCAAGAGCCAACGTTATTTGGTGGGACCATAAGAGAGAACATTGTATATGGAGCGTCCGATGAGACGGACGAGACGGAGATCGCGGAGGCCGCAAAGGCAGCGAACGCTCACGATTTTATCAGCGGATTAAAGGACGGATACGACACGTCGTGTGGGGATAAAGGGGTGCAGCTATCTGGGGGTCAAAAGCAACGGATAGCAATAGCCAGGGCAATACTAAGAAACCCAGCGGTGTTGCTATTGGACGAGGCCACCAGCGCGCTCGATAGCCAGTCGGAGAAGGCGATGCAAGAAGCGCTGGAGCGGTTGAGGTTGGGGAGGACTAGCGTAGTGGTGGCCCACAGGTTAAGTACCGTACATAACTGTGATCTTATTGTTGTGATTGAAAAAGGAAAGGTGGTGGAGAAAGGGACCCACTCTTCCCTGCTGGCTAAGGGGCCCGCAGGTGCTTATTACTCCTTGGTCAATCAGCCTGGTCCAAAGACACAGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1238

Amino Acids

134.62

Weight (kDa)

8.7

Isoelectric Point (pI)

37.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3653
Acc36I ACCTGC 1 cut(s) 3653
AccB1I GGYRCC 1 cut(s) 2303
AccB7I CCANNNNNTGG 1 cut(s) 2406
AccBSI CCGCTC 3 cut(s) 1847, 2039, 3523
AccI GTMKAC 1 cut(s) 491
AccII CGCG 4 cut(s) 872, 2681, 3302, 3479
AclI AACGTT 1 cut(s) 3230
AclWI GGATC 3 cut(s) 1540, 2340, 3125
AcoI YGGCCR 3 cut(s) 789, 2821, 3160
AcsI RAATTY 7 cut(s) 725, 1044, 1054, 1073, 1788, 1873, 2970
AcuI CTGAAG 3 cut(s) 984, 1788, 2639
AcyI GRCGYC 2 cut(s) 900, 2394
AdeI CACNNNGTG 1 cut(s) 3369
AfaI GTAC 9 cut(s) 426, 464, 956, 1381, 1906, 2054, 3179, 3571, 3576
AfeI AGCGCT 1 cut(s) 3516
AfiI CCNNNNNNNGG 6 cut(s) 1237, 1238, 2054, 2406, 2866, 3140
AflIII ACRYGT 1 cut(s) 3363
AhdI GACNNNNNGTC 1 cut(s) 1585
AhlI ACTAGT 2 cut(s) 20, 1006
AjiI CACGTC 3 cut(s) 152, 2986, 3366
AjnI CCWGG 5 cut(s) 580, 1461, 1884, 3425, 3691
AjuI GAANNNNNNNTTGG 2 cut(s) 1786, 1818
Alw21I GWGCWC 2 cut(s) 2217, 2286
Alw26I GTCTC 8 cut(s) 907, 1784, 2375, 2428, 2575, 2659, 3275, 3284
AlwI GGATC 3 cut(s) 1540, 2340, 3125
AlwNI CAGNNNCTG 1 cut(s) 1721
Ama87I CYCGRG 1 cut(s) 2693
Aor51HI AGCGCT 1 cut(s) 3516
ApaI GGGCCC 1 cut(s) 3660
ApoI RAATTY 7 cut(s) 725, 1044, 1054, 1073, 1788, 1873, 2970
ArsI GACNNNNNNTTYG 4 cut(s) 1150, 1182, 2975, 3007
AseI ATTAAT 2 cut(s) 2175, 3113
AspLEI GCGC 7 cut(s) 243, 872, 874, 1574, 3479, 3481, 3517
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 7 cut(s) 169, 190, 1481, 2314, 2353, 2369, 2806
AsuII TTCGAA 1 cut(s) 1672
AsuNHI GCTAGC 2 cut(s) 413, 1412
AvaI CYCGRG 1 cut(s) 2693
AvaII GGWCC 9 cut(s) 66, 1175, 2070, 2886, 2905, 2910, 3243, 3630, 3695
BaeGI GKGCMC 1 cut(s) 3660
BaeI ACNNNNGTAYC 2 cut(s) 1449, 1482
BalI TGGCCA 1 cut(s) 791
BanI GGYRCC 1 cut(s) 2303
BanII GRGCYC 6 cut(s) 555, 2154, 2217, 2694, 2928, 3660
BbsI GAAGAC 1 cut(s) 1976
Bbv12I GWGCWC 2 cut(s) 2217, 2286
BceAI ACGGC 6 cut(s) 883, 1676, 2426, 2441, 3081, 3175
BcgI CGANNNNNNTGC 2 cut(s) 1670, 1704
BciT130I CCWGG 5 cut(s) 582, 1463, 1886, 3427, 3693
BciVI GTATCC 1 cut(s) 3350
BclI TGATCA 1 cut(s) 1941
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 8 cut(s) 907, 1784, 2375, 2428, 2575, 2659, 3275, 3284
BcuI ACTAGT 2 cut(s) 20, 1006
BfmI CTRYAG 2 cut(s) 732, 1277
BfoI RGCGCY 1 cut(s) 3518
BfuAI ACCTGC 1 cut(s) 3653
BfuI GTATCC 1 cut(s) 3350
BglI GCCNNNNNGGC 1 cut(s) 3314
Bme1390I CCNGG 6 cut(s) 176, 582, 1463, 1886, 3427, 3693
Bme18I GGWCC 9 cut(s) 66, 1175, 2070, 2886, 2905, 2910, 3243, 3630, 3695
BmeRI GACNNNNNGTC 1 cut(s) 1585
BmeT110I CYCGRG 1 cut(s) 2693
BmgBI CACGTC 3 cut(s) 152, 2986, 3366
BmrFI CCNGG 6 cut(s) 176, 582, 1463, 1886, 3427, 3693
BmrI ACTGGG 2 cut(s) 122, 2698
BmsI GCATC 9 cut(s) 217, 339, 1125, 1775, 2229, 2613, 2718, 2827, 3495
BmtI GCTAGC 2 cut(s) 417, 1416
BmuI ACTGGG 2 cut(s) 122, 2698
BpiI GAAGAC 1 cut(s) 1976
BplI GAGNNNNNCTC 4 cut(s) 2487, 2519, 2555, 2587
BpmI CTGGAG 3 cut(s) 231, 2281, 3539
Bpu10I CCTNAGC 2 cut(s) 1186, 3651
Bpu14I TTCGAA 1 cut(s) 1672
BpuEI CTTGAG 5 cut(s) 935, 1256, 1268, 1431, 2922
BpuMI CCSGG 1 cut(s) 176
BsaAI YACGTR 3 cut(s) 233, 466, 2651
BsaBI GATNNNNATC 2 cut(s) 1514, 2177
BsaHI GRCGYC 2 cut(s) 900, 2394
BsaI GGTCTC 1 cut(s) 2375
BsaJI CCNNGG 9 cut(s) 865, 1461, 1626, 1884, 2442, 2562, 2865, 3426, 3678
BsaWI WCCGGW 1 cut(s) 2907
BsaXI ACNNNNNCTCC 2 cut(s) 870, 900
Bsc4I CCNNNNNNNGG 6 cut(s) 1237, 1238, 2054, 2406, 2866, 3140
Bse118I RCCGGY 2 cut(s) 2047, 2819
Bse1I ACTGG 5 cut(s) 117, 543, 1726, 2704, 3490
Bse3DI GCAATG 3 cut(s) 933, 1423, 2472
Bse8I GATNNNNATC 2 cut(s) 1514, 2177
BseBI CCWGG 5 cut(s) 582, 1463, 1886, 3427, 3693
BseDI CCNNGG 9 cut(s) 865, 1461, 1626, 1884, 2442, 2562, 2865, 3426, 3678
BseGI GGATG 5 cut(s) 91, 232, 395, 2181, 2577
BseJI GATNNNNATC 2 cut(s) 1514, 2177
BseLI CCNNNNNNNGG 6 cut(s) 1237, 1238, 2054, 2406, 2866, 3140
BseMI GCAATG 3 cut(s) 933, 1423, 2472
BseMII CTCAG 7 cut(s) 231, 1200, 1451, 1575, 2403, 2613, 3033
BseNI ACTGG 5 cut(s) 117, 543, 1726, 2704, 3490
BsePI GCGCGC 2 cut(s) 870, 3477
BseSI GKGCMC 1 cut(s) 3660
BseX3I CGGCCG 2 cut(s) 2821, 3160
BseYI CCCAGC 2 cut(s) 647, 3445
BsgI GTGCAG 1 cut(s) 3407
Bsh1236I CGCG 4 cut(s) 872, 2681, 3302, 3479
Bsh1285I CGRYCG 2 cut(s) 2824, 3163
BshNI GGYRCC 1 cut(s) 2303
BsiEI CGRYCG 2 cut(s) 2824, 3163
BsiHKAI GWGCWC 2 cut(s) 2217, 2286
BsiHKCI CYCGRG 1 cut(s) 2693
BsiSI CCGG 4 cut(s) 175, 2048, 2820, 2908
BslFI GGGAC 6 cut(s) 664, 1827, 2083, 3090, 3256, 3643
BslI CCNNNNNNNGG 6 cut(s) 1237, 1238, 2054, 2406, 2866, 3140
BsmAI GTCTC 8 cut(s) 907, 1784, 2375, 2428, 2575, 2659, 3275, 3284
BsmBI CGTCTC 4 cut(s) 907, 1784, 3275, 3284
BsmFI GGGAC 6 cut(s) 664, 1827, 2083, 3090, 3256, 3643
BsmI GAATGC 2 cut(s) 415, 1479
Bso31I GGTCTC 1 cut(s) 2375
BsoBI CYCGRG 1 cut(s) 2693
Bsp119I TTCGAA 1 cut(s) 1672
Bsp120I GGGCCC 1 cut(s) 3656
Bsp1286I GDGCHC 7 cut(s) 555, 2154, 2217, 2286, 2694, 2928, 3660
Bsp19I CCATGG 2 cut(s) 1626, 2865
BspCNI CTCAG 7 cut(s) 230, 1199, 1450, 1576, 2402, 2612, 3034
BspFNI CGCG 4 cut(s) 872, 2681, 3302, 3479
BspHI TCATGA 1 cut(s) 2101
BspMAI CTGCAG 2 cut(s) 736, 1281
BspMI ACCTGC 1 cut(s) 3653
BspOI GCTAGC 2 cut(s) 417, 1416
BspPI GGATC 3 cut(s) 1540, 2340, 3125
BspQI GCTCTTC 1 cut(s) 1854
BspT104I TTCGAA 1 cut(s) 1672
BspT107I GGYRCC 1 cut(s) 2303
BspTNI GGTCTC 1 cut(s) 2375
BsrBI CCGCTC 3 cut(s) 1847, 2039, 3523
BsrDI GCAATG 3 cut(s) 933, 1423, 2472
BsrFI RCCGGY 2 cut(s) 2047, 2819
BsrI ACTGG 5 cut(s) 117, 543, 1726, 2704, 3490
BssAI RCCGGY 2 cut(s) 2047, 2819
BssECI CCNNGG 9 cut(s) 865, 1461, 1626, 1884, 2442, 2562, 2865, 3426, 3678
BssHII GCGCGC 2 cut(s) 870, 3477
BssNI GRCGYC 2 cut(s) 900, 2394
BssT1I CCWWGG 3 cut(s) 1626, 2865, 3678
Bst2UI CCWGG 5 cut(s) 582, 1463, 1886, 3427, 3693
Bst6I CTCTTC 5 cut(s) 622, 627, 1854, 2109, 3643
BstACI GRCGYC 2 cut(s) 900, 2394
BstBAI YACGTR 3 cut(s) 233, 466, 2651
BstBI TTCGAA 1 cut(s) 1672
BstDSI CCRYGG 4 cut(s) 865, 1626, 2442, 2865
BstEII GGTNACC 1 cut(s) 2812
BstF5I GGATG 5 cut(s) 91, 232, 395, 2181, 2577
BstFNI CGCG 4 cut(s) 872, 2681, 3302, 3479
BstH2I RGCGCY 1 cut(s) 3518
BstHHI GCGC 7 cut(s) 243, 872, 874, 1574, 3479, 3481, 3517
BstMAI GTCTC 8 cut(s) 907, 1784, 2375, 2428, 2575, 2659, 3275, 3284
BstMCI CGRYCG 2 cut(s) 2824, 3163
BstNI CCWGG 5 cut(s) 582, 1463, 1886, 3427, 3693
BstNSI RCATGY 4 cut(s) 83, 333, 972, 2755
BstPI GGTNACC 1 cut(s) 2812
BstSCI CCNGG 6 cut(s) 174, 580, 1461, 1884, 3425, 3691
BstSFI CTRYAG 2 cut(s) 732, 1277
BstSLI GKGCMC 1 cut(s) 3660
BstUI CGCG 4 cut(s) 872, 2681, 3302, 3479
BstV2I GAAGAC 1 cut(s) 1976
BstX2I RGATCY 2 cut(s) 1545, 2345
BstXI CCANNNNNNTGG 2 cut(s) 1892, 2920
BstYI RGATCY 2 cut(s) 1545, 2345
BstZI CGGCCG 2 cut(s) 2821, 3160
BsuI GTATCC 1 cut(s) 3350
BtgI CCRYGG 4 cut(s) 865, 1626, 2442, 2865
BtgZI GCGATG 4 cut(s) 150, 1501, 1633, 3518
BtrI CACGTC 3 cut(s) 152, 2986, 3366
BtsCI GGATG 5 cut(s) 91, 232, 395, 2181, 2577
BtsI GCAGTG 2 cut(s) 1819, 2589
BtsIMutI CAGTG 8 cut(s) 110, 339, 1206, 1208, 1819, 2088, 2589, 2711
BveI ACCTGC 1 cut(s) 3653
CaiI CAGNNNCTG 1 cut(s) 1721
CciI TCATGA 1 cut(s) 2101
CfoI GCGC 7 cut(s) 243, 872, 874, 1574, 3479, 3481, 3517
Cfr10I RCCGGY 2 cut(s) 2047, 2819
CseI GACGC 5 cut(s) 889, 1699, 1898, 2383, 3261
Csp6I GTAC 9 cut(s) 425, 463, 955, 1380, 1905, 2053, 3178, 3570, 3575
CviQI GTAC 9 cut(s) 425, 463, 955, 1380, 1905, 2053, 3178, 3570, 3575
DraI TTTAAA 2 cut(s) 1078, 3171
DraIII CACNNNGTG 1 cut(s) 3369
DriI GACNNNNNGTC 1 cut(s) 1585
EaeI YGGCCR 3 cut(s) 789, 2821, 3160
EagI CGGCCG 2 cut(s) 2821, 3160
Eam1104I CTCTTC 5 cut(s) 622, 627, 1854, 2109, 3643
Eam1105I GACNNNNNGTC 1 cut(s) 1585
EarI CTCTTC 5 cut(s) 622, 627, 1854, 2109, 3643
Ecl136II GAGCTC 1 cut(s) 2215
EclXI CGGCCG 2 cut(s) 2821, 3160
Eco130I CCWWGG 3 cut(s) 1626, 2865, 3678
Eco147I AGGCCT 1 cut(s) 1108
Eco24I GRGCYC 6 cut(s) 555, 2154, 2217, 2694, 2928, 3660
Eco31I GGTCTC 1 cut(s) 2375
Eco32I GATATC 1 cut(s) 2079
Eco47I GGWCC 9 cut(s) 66, 1175, 2070, 2886, 2905, 2910, 3243, 3630, 3695
Eco47III AGCGCT 1 cut(s) 3516
Eco52I CGGCCG 2 cut(s) 2821, 3160
Eco53kI GAGCTC 1 cut(s) 2215
Eco57I CTGAAG 3 cut(s) 984, 1788, 2639
Eco88I CYCGRG 1 cut(s) 2693
Eco91I GGTNACC 1 cut(s) 2812
EcoICRI GAGCTC 1 cut(s) 2215
EcoO109I RGGNCCY 3 cut(s) 1175, 3630, 3656
EcoO65I GGTNACC 1 cut(s) 2812
EcoRI GAATTC 1 cut(s) 1873
EcoRII CCWGG 5 cut(s) 580, 1461, 1884, 3425, 3691
EcoRV GATATC 1 cut(s) 2079
EcoT14I CCWWGG 3 cut(s) 1626, 2865, 3678
EcoT22I ATGCAT 2 cut(s) 81, 697
EcoT38I GRGCYC 6 cut(s) 555, 2154, 2217, 2694, 2928, 3660
ErhI CCWWGG 3 cut(s) 1626, 2865, 3678
Esp3I CGTCTC 4 cut(s) 907, 1784, 3275, 3284
FaqI GGGAC 6 cut(s) 664, 1827, 2083, 3090, 3256, 3643
FauI CCCGC 4 cut(s) 496, 1852, 2674, 3667
FbaI TGATCA 1 cut(s) 1941
FblI GTMKAC 1 cut(s) 491
FokI GGATG 5 cut(s) 98, 239, 402, 2168, 2564
FriOI GRGCYC 6 cut(s) 555, 2154, 2217, 2694, 2928, 3660
GlaI GCGC 7 cut(s) 242, 871, 873, 1573, 3478, 3480, 3516
GsaI CCCAGC 2 cut(s) 651, 3449
GsuI CTGGAG 3 cut(s) 231, 2281, 3539
HaeII RGCGCY 1 cut(s) 3518
HapII CCGG 4 cut(s) 175, 2048, 2820, 2908
HgaI GACGC 5 cut(s) 889, 1699, 1898, 2383, 3261
HhaI GCGC 7 cut(s) 243, 872, 874, 1574, 3479, 3481, 3517
Hin1I GRCGYC 2 cut(s) 900, 2394
Hin6I GCGC 7 cut(s) 241, 870, 872, 1572, 3477, 3479, 3515
HinP1I GCGC 7 cut(s) 241, 870, 872, 1572, 3477, 3479, 3515
HincII GTYRAC 2 cut(s) 94, 2761
HindII GTYRAC 2 cut(s) 94, 2761
HindIII AAGCTT 1 cut(s) 2552
HinfI GANTC 7 cut(s) 1022, 1580, 1586, 1981, 2058, 2496, 3123
HpaII CCGG 4 cut(s) 175, 2048, 2820, 2908
HphI GGTGA 7 cut(s) 169, 190, 1481, 2314, 2353, 2369, 2806
Hpy166II GTNNAC 8 cut(s) 94, 319, 425, 492, 1665, 2053, 2517, 2761
Hpy8I GTNNAC 8 cut(s) 94, 319, 425, 492, 1665, 2053, 2517, 2761
Hpy99I CGWCG 4 cut(s) 1685, 1736, 2399, 3370
HpyAV CCTTC 6 cut(s) 317, 1335, 1559, 2605, 2636, 3493
Hsp92I GRCGYC 2 cut(s) 900, 2394
HspAI GCGC 7 cut(s) 241, 870, 872, 1572, 3477, 3479, 3515
KflI GGGWCCC 1 cut(s) 3630
Ksp22I TGATCA 1 cut(s) 1941
LguI GCTCTTC 1 cut(s) 1854
LmnI GCTCC 7 cut(s) 125, 212, 558, 2036, 2923, 3269, 3520
LweI GCATC 9 cut(s) 217, 339, 1125, 1775, 2229, 2613, 2718, 2827, 3495
MaeIII GTNAC 7 cut(s) 506, 997, 1711, 1817, 2773, 2812, 2981
MbiI CCGCTC 3 cut(s) 1847, 2039, 3523
MfeI CAATTG 2 cut(s) 1868, 2722
MflI RGATCY 2 cut(s) 1545, 2345
MhlI GDGCHC 7 cut(s) 555, 2154, 2217, 2286, 2694, 2928, 3660
MlsI TGGCCA 1 cut(s) 791
MluNI TGGCCA 1 cut(s) 791
MlyI GAGTC 4 cut(s) 1574, 1595, 1990, 2505
MmeI TCCRAC 8 cut(s) 566, 682, 1513, 1807, 2485, 2598, 3052, 3474
Mox20I TGGCCA 1 cut(s) 791
Mph1103I ATGCAT 2 cut(s) 81, 697
MscI TGGCCA 1 cut(s) 791
MslI CAYNNNNRTG 5 cut(s) 74, 84, 1484, 2918, 3582
Msp20I TGGCCA 1 cut(s) 791
MspA1I CMGCKG 5 cut(s) 977, 1441, 2301, 3342, 3449
MspI CCGG 4 cut(s) 175, 2048, 2820, 2908
MspR9I CCNGG 6 cut(s) 176, 582, 1463, 1886, 3427, 3693
MunI CAATTG 2 cut(s) 1868, 2722
Mva1269I GAATGC 2 cut(s) 415, 1479
MvaI CCWGG 5 cut(s) 582, 1463, 1886, 3427, 3693
MvnI CGCG 4 cut(s) 872, 2681, 3302, 3479
NciI CCSGG 1 cut(s) 176
NcoI CCATGG 2 cut(s) 1626, 2865
NheI GCTAGC 2 cut(s) 413, 1412
NmeAIII GCCGAG 2 cut(s) 2587, 3188
NmuCI GTSAC 5 cut(s) 1711, 1817, 2773, 2812, 2981
NsiI ATGCAT 2 cut(s) 81, 697
NspI RCATGY 4 cut(s) 83, 333, 972, 2755
NspV TTCGAA 1 cut(s) 1672
PaeI GCATGC 2 cut(s) 83, 2755
PagI TCATGA 1 cut(s) 2101
PaqCI CACCTGC 1 cut(s) 3653
PauI GCGCGC 2 cut(s) 870, 3477
PceI AGGCCT 1 cut(s) 1108
PciSI GCTCTTC 1 cut(s) 1854
PcsI WCGNNNNNNNCGW 2 cut(s) 1689, 3500
PctI GAATGC 2 cut(s) 415, 1479
PfeI GAWTC 3 cut(s) 1022, 2058, 3123
PflMI CCANNNNNTGG 1 cut(s) 2406
PleI GAGTC 4 cut(s) 1574, 1594, 1989, 2504
PpsI GAGTC 4 cut(s) 1574, 1594, 1989, 2504
Ppu21I YACGTR 3 cut(s) 233, 466, 2651
PpuMI RGGWCCY 2 cut(s) 1175, 3630
PshBI ATTAAT 2 cut(s) 2175, 3113
Psp124BI GAGCTC 1 cut(s) 2217
Psp1406I AACGTT 1 cut(s) 3230
Psp5II RGGWCCY 2 cut(s) 1175, 3630
Psp6I CCWGG 5 cut(s) 580, 1461, 1884, 3425, 3691
PspEI GGTNACC 1 cut(s) 2812
PspFI CCCAGC 2 cut(s) 647, 3445
PspGI CCWGG 5 cut(s) 580, 1461, 1884, 3425, 3691
PspOMI GGGCCC 1 cut(s) 3656
PspPPI RGGWCCY 2 cut(s) 1175, 3630
PstI CTGCAG 2 cut(s) 736, 1281
PstNI CAGNNNCTG 1 cut(s) 1721
PsuI RGATCY 2 cut(s) 1545, 2345
PteI GCGCGC 2 cut(s) 870, 3477
PvuII CAGCTG 2 cut(s) 977, 1441
RsaI GTAC 9 cut(s) 426, 464, 956, 1381, 1906, 2054, 3179, 3571, 3576
RsaNI GTAC 9 cut(s) 425, 463, 955, 1380, 1905, 2053, 3178, 3570, 3575
RseI CAYNNNNRTG 5 cut(s) 74, 84, 1484, 2918, 3582
SacI GAGCTC 1 cut(s) 2217
SapI GCTCTTC 1 cut(s) 1854
SchI GAGTC 4 cut(s) 1574, 1595, 1990, 2505
ScrFI CCNGG 6 cut(s) 176, 582, 1463, 1886, 3427, 3693
SduI GDGCHC 7 cut(s) 555, 2154, 2217, 2286, 2694, 2928, 3660
SfaNI GCATC 9 cut(s) 217, 339, 1125, 1775, 2229, 2613, 2718, 2827, 3495
SfcI CTRYAG 2 cut(s) 732, 1277
SfuI TTCGAA 1 cut(s) 1672
SinI GGWCC 9 cut(s) 66, 1175, 2070, 2886, 2905, 2910, 3243, 3630, 3695
SmiMI CAYNNNNRTG 5 cut(s) 74, 84, 1484, 2918, 3582
SmlI CTYRAG 5 cut(s) 950, 1235, 1283, 1446, 2937
SmoI CTYRAG 5 cut(s) 950, 1235, 1283, 1446, 2937
SpeI ACTAGT 2 cut(s) 20, 1006
SphI GCATGC 2 cut(s) 83, 2755
SseBI AGGCCT 1 cut(s) 1108
SstI GAGCTC 1 cut(s) 2217
StuI AGGCCT 1 cut(s) 1108
StyD4I CCNGG 6 cut(s) 174, 580, 1461, 1884, 3425, 3691
StyI CCWWGG 3 cut(s) 1626, 2865, 3678
TaqI TCGA 7 cut(s) 303, 1672, 1877, 2280, 3038, 3098, 3483
TatI WGTACW 3 cut(s) 424, 954, 1904
TauI GCSGC 1 cut(s) 3311
TfiI GAWTC 3 cut(s) 1022, 2058, 3123
TscAI CASTG 8 cut(s) 117, 346, 1206, 1215, 1826, 2088, 2596, 2711
TseFI GTSAC 5 cut(s) 1711, 1817, 2773, 2812, 2981
Tsp45I GTSAC 5 cut(s) 1711, 1817, 2773, 2812, 2981
TspDTI ATGAA 5 cut(s) 42, 64, 514, 1420, 1947
TspGWI ACGGA 8 cut(s) 421, 1766, 2070, 2146, 3299, 3308, 3369, 3427
TspRI CASTG 8 cut(s) 117, 346, 1206, 1215, 1826, 2088, 2596, 2711
Van91I CCANNNNNTGG 1 cut(s) 2406
VpaK11BI GGWCC 9 cut(s) 66, 1175, 2070, 2886, 2905, 2910, 3243, 3630, 3695
VspI ATTAAT 2 cut(s) 2175, 3113
XapI RAATTY 7 cut(s) 725, 1044, 1054, 1073, 1788, 1873, 2970
XbaI TCTAGA 1 cut(s) 1252
XceI RCATGY 4 cut(s) 83, 333, 972, 2755
XcmI CCANNNNNNNNNTGG 1 cut(s) 2806
XmiI GTMKAC 1 cut(s) 491
Zsp2I ATGCAT 2 cut(s) 81, 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.