RchiOBHm_Chr2g0091821

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000317
Physical Location & Seq
Reverse (-)
5504690 .. 5510460
5771 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46699

Sequence Viewer

Length: 3741 bp
ATGGGTTCTCCGGAGAAGAATGAGAACCATGAGAAAGAAGAGAAGAAGTCCGCAGATTCAGTATTCAAAATTTTCAGATATGCTGATTGGGTTGATGTTGTGCTAATGGTTTTTGGAACCATCGGAGCTATCGGAGATGGCATGTCTACTAACTGTTTGCTGCTCTTTGCCAGCCGTCTTATGAACAACTTGGGGTACGGTCAGAATCAGACCCAACAGAATAATAATCATGGCAATTGGATGGACGAGGTTGAAAAGTGCAGTTTATACTTTGTATACTTGGGATTAGCAGTAATGCTGGTGGCTTTTTTGGGCTATTGTTGGAGCAAAACCAGTGAGAGGCAGGTGCTGAAGATTCGTTACAAGTACTTGGAAGCTGTTCTTAGACAAGAAGTTGGGTTTTTCGATTCACAAGAAGCAAGTACTTCGGAGGTGATCAACAGTATATCAAAAGATACTTCTCATTTACAGGAAGTTCTGAGTGAAAAGGTGCCGATATTTTTTATGCACTCGTCAGTGTTCGTCTCCGGGCTTGCTTTCTCCACCTTCTTGTCTTGGAGACTATCCGTAGTAGCATTTCCAACACTTCTTCTCCTGATCATACCCGGAATGATCTATGGGAAATATCTTCTTTATTTGTCTAAACAGTCATACAAAGAGTATGGAAAAGCAAACACCATTGTAGAGCAAGCTCTGAGCTCCATCAAAACCGTCTATTCGTTCACGGCTGAGAGGACAATTTTGGAGAGGTACTCAGCAGTATTGGAGAGAACAAGAAGGCTGGGGATCAAGCAAGGGATTGCAAAAGGTCTTGCTGTAGGAAGCACAGGGCTGTCTTTTGCAATATGGGCATTTCTGGCTTGGTATGGAAGCCATTTGGTGATGTATAGAGGTGAAAGTGGTGGTAGGATCTATGCTGCTGGCATCTCCTTCGTACTGAGTGGACTATCCTTGGGAATGGCACTTCCAGATTTGAGGCACTTTACAGAAGCTTCCATTGCTGCATCACGCATATTCGATAGGATTGACCGAAAACCATTGATTGATGGTGAAGACATAAAAGGACTTGTCTTGGACAACATTAGAGGCGAAGTAGAATTCATAGATGTCAGATTCACATACCCTTCTCGTCCGGATTCCATTGTCCTCAAAGACTTCAATCTCAAAGTTGAAGCAGGGAAGACAATTGCACTTGTTGGTGCCAGCGGAAGTGGCAAATCCACAGCAATTGCATTGGTGCAACGCTTTTATGATGCAGATGGGGGAGTTGTTCGAATTGATGGTGTCGATATAAAGACACTTCAATTGAAGTGGATAAGATCGCAAATGGGACTTGTTAGTCAAGAACATGCTTTGTTTGGTACATCAATAAAGGAAAATATCATGTTTGGGAAACTTGATGCCAATATGGATGAAGTCACAGCTGCTGCTATGGCTTCCAATGCTCACAATTTCATAAGGCAGCTTCCTGAAGGGTATGAGACCAAGATTGGAGAGCGAGGAGCACTTTTATCGGGGGGACAAAAGCAGCGGATAGCCATTGCTAGAGCAATTATCAAGAATCCTATAATTCTCTTACTTGATGAAGCAACAAGTGCTCTTGACTCTGAGTCAGAGACACTGGTCCAAAATGCTCTTGACCAAGCCTCCATGGGAAGAACCACATTGGTGGTAGCTCACAAGCTTTCTACAGTTCGAAATGCAGACCTCATTGCGGTGGTCAGTGGGGGTTGCGTCATCGAAATAGGCTCACACAACGACCTCATCAACCGTCAAAATGGGCAGTATGCAAAGCTAGCAAAGATGCAGAGACAGTTCAGCACCTTTGACAATGTAGACCAAGACCAAAATTCAGATACACGCTTGTCTTCGGTTGCAAGAAGCAGTGCTGGCAGGTTAAGCACCGCAAGATCAAGCCCTGCTATGTTTGCAAAATCACCACTAGCTATTGAGACCACAGAATCTGTAGTGTCTCATCCCCCAACCTCCTTCTACCGCCTTCTCTCTTTAAACTCCCCTGAATGGAAGCAAGGCCTAATTGGAAGCCTCTCAGCGATAGCCTTTGGCTCAGTCCAACCTATCTATGCCCTCACCGTGGGTGGTATGATATCAGCTTTTTTTGTGCACAGCCATGAGGAAATGCGTGCACGAATTCGAACATATTCATTGATTTTCTCTGCGCTTTCCTTAATCTCCATGACATTGAATCTTTTGCAACATTATAATTTTGCTTATATGGGTGAGCAGCTCACGAAAAGAATCCGATTGCAAATGCTCCAAAAGATCTTGACCTTTGAGACAGCTTGGTTTGATGAGGAGCACAACACAAGTGGGGCATTGTGTTCAAGATTGAGCAATGAGGCTTCCATGGTGAAGTCCCTTGTGGCAGACAGGGTCTCTTTATTAGTCCAAACCACTTCAGCCGTCACAATTGCTATGATGTTGGGACTAATAGTTGCTTGGAAGCTAGCACTTGTTATGATTGCGGTCCAACCACTCGCGATTCTTTGCTTCTACACCAAGAAAGTGCTGCTCTCTAGCCTTTCAGCCAATTTTGTCAAGGCGCAAAACCATAGCACCCAAATTGCAGTTGAAGCAGTTTATAACCATAGAATTGTAACTTCATTTGCAAGTGTAGGGAAAGTGCTCCAAATATTCGACAAAGCTCAGGAGGCACCAAGAAAAGAGGCAAGGAAGAAATCATGGCTGGCTGGCATTGGAATGGGGTCAGCTCAGTGCCTAACATTTATGTCATGGGCATTGGACTTTTGGTATGGTGGTAAACTAGTCGAAAATGGACAAATATCAGCTGGGGATGTGTTCAAAACATTTTTCATATTGGTTAGTACTGGTAAGGTTATAGCAGAAGCTGGGAGCATGACTTCTGATTTAGCCAAGGGTGCTACTGCAGTTGCATCTGTGTTTGACATTCTTGACAGGCACTCACTGATTCCAGGGTCACAGAATGTTGGGGATGATGATAGTACTAGTGGAATCAAGTTAGAAAAAGTAACAGGGAGGATAGATATGAAGAAAGTTGACTTTGCATACCCAAGCAGGCCGGAGACCCTAGTGTTGCGCCAATTTAGCTTGGAGGTCAAGACAGGCACAAGCATTGGACTTGTTGGGAAAAGTGGGTGTGGTAAATCAACTGTGATTGGACTGATACAAAGGTTTTATGATGTTGAGAGGGGGTCAGTGAAGGTAGATGGAGTTGATATAAGGGAGCTAGATGTTCAATGGTATAGGAAGCACACTGGCCTTGTTAGCCAAGAGCCGGTGATATATTCAGGCACCATCCGTGACAACATCATGTTCGGAAAGCTTGATGCTTCGGAAAATGAAGTCGTAGAGGCTGCCAGAGCTGCCAATGCTCACGAATTCATCTCAGCCTTGAAAGACGGCTATGAGACAGAATGTGGTGAAAGAGGAGTGCAGCTCTCAGGAGGGCAGAAGCAAAGAATAGCAATAGCAAGAGCAATACTTAGGAACCCTATAATACTATTGCTAGATGAGGCAACAAGCGCTCTTGATGTGCAATCGGAGCACCTTGTGCAGGAAGCATTGGACCGAATCATGGTTGGAAGGACCACAATTGTGATAGCACATCGACTTAACACCATAAAAAACCTTGAGATGATTGCAGTTGTCGAAGATGGGAAGGTTATAGAGAAAGGCACTTATGCTCAGCTCAAGCACAAGCGTGGTGCCTTCTTCAACCTTGCTAGCTGTCAAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1246

Amino Acids

137.04

Weight (kDa)

8.68

Isoelectric Point (pI)

28.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 55 - 298 7.2e-44 ABC transporter transmembrane region
ABC_tran PF00005 383 - 532 1.9e-30 ABC transporter
ABC_membrane PF00664 682 - 949 5.1e-46 ABC transporter transmembrane region
ABC_tran PF00005 1026 - 1175 6.6e-30 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2223, 2604
AarI CACCTGC 1 cut(s) 334
AasI GACNNNNNNGTC 1 cut(s) 1338
Acc36I ACCTGC 2 cut(s) 334, 1884
AccB1I GGYRCC 5 cut(s) 490, 1199, 2674, 3293, 3707
AccI GTMKAC 3 cut(s) 146, 276, 1836
AccII CGCG 1 cut(s) 2501
AccIII TCCGGA 2 cut(s) 10, 1132
AciI CCGC 7 cut(s) 51, 1206, 1531, 1715, 1905, 1996, 2486
AclWI GGATC 2 cut(s) 794, 917
AcsI RAATTY 5 cut(s) 69, 1097, 1849, 2151, 3380
AcuI CTGAAG 3 cut(s) 371, 1491, 2403
AdeI CACNNNGTG 1 cut(s) 3553
AfaI GTAC 8 cut(s) 197, 368, 424, 752, 936, 1363, 2848, 2986
AfeI AGCGCT 1 cut(s) 3526
AfiI CCNNNNNNNGG 7 cut(s) 339, 1714, 2022, 2095, 3277, 3556, 3577
AhdI GACNNNNNGTC 1 cut(s) 1609
AhlI ACTAGT 2 cut(s) 2785, 2987
AjnI CCWGG 1 cut(s) 2953
AleI CACNNNNGTG 3 cut(s) 1667, 3596, 3702
Alw21I GWGCWC 8 cut(s) 701, 1507, 1600, 2127, 2149, 2322, 2649, 3549
Alw44I GTGCAC 2 cut(s) 2123, 2145
AlwI GGATC 2 cut(s) 794, 917
AlwNI CAGNNNCTG 4 cut(s) 349, 1427, 1964, 2870
Aor13HI TCCGGA 2 cut(s) 10, 1132
Aor51HI AGCGCT 1 cut(s) 3526
AoxI GGCC 3 cut(s) 2032, 3059, 3259
ApaLI GTGCAC 2 cut(s) 2123, 2145
ApoI RAATTY 5 cut(s) 69, 1097, 1849, 2151, 3380
Asp700I GAANNNNTTC 2 cut(s) 378, 2161
AspLEI GCGC 4 cut(s) 2182, 2566, 3081, 3527
AspS9I GGNCC 4 cut(s) 1624, 2488, 3568, 3588
AsuC2I CCSGG 2 cut(s) 529, 606
AsuII TTCGAA 3 cut(s) 1273, 1696, 2155
AsuNHI GCTAGC 3 cut(s) 1795, 2467, 3725
AvaII GGWCC 4 cut(s) 1624, 2488, 3568, 3588
BaeGI GKGCMC 2 cut(s) 2127, 2149
BaeI ACNNNNGTAYC 2 cut(s) 3158, 3191
BanI GGYRCC 5 cut(s) 490, 1199, 2674, 3293, 3707
BanII GRGCYC 1 cut(s) 701
BarI GAAGNNNNNNTAC 2 cut(s) 344, 376
BbsI GAAGAC 3 cut(s) 1059, 1187, 1860
Bbv12I GWGCWC 8 cut(s) 701, 1507, 1600, 2127, 2149, 2322, 2649, 3549
BceAI ACGGC 4 cut(s) 159, 741, 2408, 3418
BcgI CGANNNNNNTGC 6 cut(s) 408, 442, 913, 947, 1494, 1528
BciT130I CCWGG 1 cut(s) 2955
BclI TGATCA 2 cut(s) 435, 597
BcnI CCSGG 2 cut(s) 529, 606
BcuI ACTAGT 2 cut(s) 2785, 2987
BfmI CTRYAG 4 cut(s) 816, 1689, 1965, 2907
BfoI RGCGCY 1 cut(s) 3528
BfuAI ACCTGC 2 cut(s) 334, 1884
BglII AGATCT 1 cut(s) 2283
BlpI GCTNAGC 1 cut(s) 3687
BmcAI AGTACT 4 cut(s) 368, 424, 2848, 2986
Bme1390I CCNGG 3 cut(s) 529, 606, 2955
Bme18I GGWCC 4 cut(s) 1624, 2488, 3568, 3588
BmeRI GACNNNNNGTC 1 cut(s) 1609
BmgT120I GGNCC 4 cut(s) 1624, 2488, 3568, 3588
BmiI GGNNCC 7 cut(s) 118, 492, 1201, 2676, 3295, 3491, 3709
BmrFI CCNGG 3 cut(s) 529, 606, 2955
BmsI GCATC 7 cut(s) 933, 1013, 1243, 1390, 1794, 2924, 3319
BmtI GCTAGC 3 cut(s) 1799, 2471, 3729
BoxI GACNNNNGTC 1 cut(s) 1622
BpiI GAAGAC 3 cut(s) 1059, 1187, 1860
BplI GAGNNNNNCTC 4 cut(s) 737, 769, 3423, 3455
Bpu10I CCTNAGC 1 cut(s) 2667
Bpu1102I GCTNAGC 1 cut(s) 3687
Bpu14I TTCGAA 3 cut(s) 1273, 1696, 2155
BpuEI CTTGAG 2 cut(s) 3653, 3677
BpuMI CCSGG 2 cut(s) 529, 606
BsaI GGTCTC 4 cut(s) 1475, 1946, 2401, 3059
BsaJI CCNNGG 6 cut(s) 951, 1650, 2094, 2367, 2895, 2954
BsaWI WCCGGW 2 cut(s) 10, 1132
BsaXI ACNNNNNCTCC 4 cut(s) 576, 606, 1631, 1661
Bsc4I CCNNNNNNNGG 7 cut(s) 339, 1714, 2022, 2095, 3277, 3556, 3577
Bse118I RCCGGY 1 cut(s) 3277
Bse1I ACTGG 4 cut(s) 333, 1626, 2854, 3262
Bse3DI GCAATG 4 cut(s) 996, 1539, 1710, 2362
BseAI TCCGGA 2 cut(s) 10, 1132
BseBI CCWGG 1 cut(s) 2955
BseDI CCNNGG 6 cut(s) 951, 1650, 2094, 2367, 2895, 2954
BseGI GGATG 6 cut(s) 246, 1417, 1975, 2821, 2980, 3297
BseLI CCNNNNNNNGG 7 cut(s) 339, 1714, 2022, 2095, 3277, 3556, 3577
BseMI GCAATG 4 cut(s) 996, 1539, 1710, 2362
BseNI ACTGG 4 cut(s) 333, 1626, 2854, 3262
BseRI GAGGAG 3 cut(s) 1515, 2330, 3444
BseSI GKGCMC 2 cut(s) 2127, 2149
BseYI CCCAGC 3 cut(s) 781, 2810, 2870
BsgI GTGCAG 3 cut(s) 280, 3455, 3575
Bsh1236I CGCG 1 cut(s) 2501
BshFI GGCC 3 cut(s) 2034, 3061, 3261
BshNI GGYRCC 5 cut(s) 490, 1199, 2674, 3293, 3707
BsiHKAI GWGCWC 8 cut(s) 701, 1507, 1600, 2127, 2149, 2322, 2649, 3549
BsiSI CCGG 6 cut(s) 11, 528, 606, 1133, 3062, 3278
BslFI GGGAC 4 cut(s) 1344, 1533, 2362, 2460
BslI CCNNNNNNNGG 7 cut(s) 339, 1714, 2022, 2095, 3277, 3556, 3577
BsmBI CGTCTC 1 cut(s) 529
BsmFI GGGAC 4 cut(s) 1344, 1533, 2362, 2460
BsnI GGCC 3 cut(s) 2034, 3061, 3261
Bso31I GGTCTC 4 cut(s) 1475, 1946, 2401, 3059
Bsp119I TTCGAA 3 cut(s) 1273, 1696, 2155
Bsp1286I GDGCHC 8 cut(s) 701, 1507, 1600, 2127, 2149, 2322, 2649, 3549
Bsp13I TCCGGA 2 cut(s) 10, 1132
Bsp143I GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
Bsp1720I GCTNAGC 1 cut(s) 3687
Bsp19I CCATGG 2 cut(s) 1650, 2367
Bsp68I TCGCGA 1 cut(s) 2501
BspACI CCGC 7 cut(s) 51, 1206, 1531, 1715, 1905, 1996, 2486
BspANI GGCC 3 cut(s) 2034, 3061, 3261
BspEI TCCGGA 2 cut(s) 10, 1132
BspFNI CGCG 1 cut(s) 2501
BspLI GGNNCC 7 cut(s) 118, 492, 1201, 2676, 3295, 3491, 3709
BspMAI CTGCAG 1 cut(s) 2911
BspMI ACCTGC 2 cut(s) 334, 1884
BspOI GCTAGC 3 cut(s) 1799, 2471, 3729
BspPI GGATC 2 cut(s) 794, 917
BspT104I TTCGAA 3 cut(s) 1273, 1696, 2155
BspT107I GGYRCC 5 cut(s) 490, 1199, 2674, 3293, 3707
BspTNI GGTCTC 4 cut(s) 1475, 1946, 2401, 3059
BsrDI GCAATG 4 cut(s) 996, 1539, 1710, 2362
BsrFI RCCGGY 1 cut(s) 3277
BsrI ACTGG 4 cut(s) 333, 1626, 2854, 3262
BssAI RCCGGY 1 cut(s) 3277
BssECI CCNNGG 6 cut(s) 951, 1650, 2094, 2367, 2895, 2954
BssMI GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
BssNAI GTATAC 1 cut(s) 277
BssT1I CCWWGG 4 cut(s) 951, 1650, 2367, 2895
Bst1107I GTATAC 1 cut(s) 277
Bst2UI CCWGG 1 cut(s) 2955
Bst6I CTCTTC 1 cut(s) 33
BstAPI GCANNNNNTGC 2 cut(s) 1595, 3553
BstBI TTCGAA 3 cut(s) 1273, 1696, 2155
BstDSI CCRYGG 3 cut(s) 1650, 2094, 2367
BstENI CCTNNNNNAGG 1 cut(s) 3554
BstF5I GGATG 6 cut(s) 246, 1417, 1975, 2821, 2980, 3297
BstFNI CGCG 1 cut(s) 2501
BstH2I RGCGCY 1 cut(s) 3528
BstHHI GCGC 4 cut(s) 2182, 2566, 3081, 3527
BstKTI GATC 8 cut(s) 438, 600, 615, 789, 912, 1322, 1913, 2286
BstMBI GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
BstNI CCWGG 1 cut(s) 2955
BstNSI RCATGY 2 cut(s) 145, 1352
BstPAI GACNNNNGTC 1 cut(s) 1622
BstSCI CCNGG 3 cut(s) 527, 604, 2953
BstSFI CTRYAG 4 cut(s) 816, 1689, 1965, 2907
BstSLI GKGCMC 2 cut(s) 2127, 2149
BstUI CGCG 1 cut(s) 2501
BstV2I GAAGAC 3 cut(s) 1059, 1187, 1860
BstX2I RGATCY 2 cut(s) 909, 2283
BstXI CCANNNNNNTGG 1 cut(s) 1669
BstYI RGATCY 2 cut(s) 909, 2283
BstZ17I GTATAC 1 cut(s) 277
BsuRI GGCC 3 cut(s) 2034, 3061, 3261
BtgI CCRYGG 3 cut(s) 1650, 2094, 2367
BtsCI GGATG 6 cut(s) 246, 1417, 1975, 2821, 2980, 3297
BtsI GCAGTG 1 cut(s) 1891
BtsIMutI CAGTG 9 cut(s) 340, 522, 1619, 1729, 1891, 2741, 2945, 3204, 3255
BtuMI TCGCGA 1 cut(s) 2501
BveI ACCTGC 2 cut(s) 334, 1884
CaiI CAGNNNCTG 4 cut(s) 349, 1427, 1964, 2870
CfoI GCGC 4 cut(s) 2182, 2566, 3081, 3527
Cfr10I RCCGGY 1 cut(s) 3277
Cfr13I GGNCC 4 cut(s) 1624, 2488, 3568, 3588
CseI GACGC 1 cut(s) 1723
Csp6I GTAC 8 cut(s) 196, 367, 423, 751, 935, 1362, 2847, 2985
CspCI CAANNNNNGTGG 6 cut(s) 1210, 1245, 1292, 1327, 2311, 2346
CviQI GTAC 8 cut(s) 196, 367, 423, 751, 935, 1362, 2847, 2985
DpnI GATC 8 cut(s) 437, 599, 614, 788, 911, 1321, 1912, 2285
DpnII GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
DraI TTTAAA 1 cut(s) 2010
DraIII CACNNNGTG 1 cut(s) 3553
DrdI GACNNNNNNGTC 1 cut(s) 1338
DriI GACNNNNNGTC 1 cut(s) 1609
DseDI GACNNNNNNGTC 1 cut(s) 1338
Eam1104I CTCTTC 1 cut(s) 33
Eam1105I GACNNNNNGTC 1 cut(s) 1609
EarI CTCTTC 1 cut(s) 33
Ecl136II GAGCTC 1 cut(s) 699
Eco130I CCWWGG 4 cut(s) 951, 1650, 2367, 2895
Eco147I AGGCCT 1 cut(s) 2034
Eco24I GRGCYC 1 cut(s) 701
Eco31I GGTCTC 4 cut(s) 1475, 1946, 2401, 3059
Eco32I GATATC 1 cut(s) 2109
Eco47I GGWCC 4 cut(s) 1624, 2488, 3568, 3588
Eco47III AGCGCT 1 cut(s) 3526
Eco53kI GAGCTC 1 cut(s) 699
Eco57I CTGAAG 3 cut(s) 371, 1491, 2403
EcoICRI GAGCTC 1 cut(s) 699
EcoNI CCTNNNNNAGG 1 cut(s) 3554
EcoRI GAATTC 3 cut(s) 1097, 2151, 3380
EcoRII CCWGG 1 cut(s) 2953
EcoRV GATATC 1 cut(s) 2109
EcoT14I CCWWGG 4 cut(s) 951, 1650, 2367, 2895
EcoT38I GRGCYC 1 cut(s) 701
ErhI CCWWGG 4 cut(s) 951, 1650, 2367, 2895
Esp3I CGTCTC 1 cut(s) 529
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 4 cut(s) 1344, 1533, 2362, 2460
FbaI TGATCA 2 cut(s) 435, 597
FblI GTMKAC 3 cut(s) 146, 276, 1836
FokI GGATG 6 cut(s) 253, 1424, 1962, 2828, 2987, 3284
FriOI GRGCYC 1 cut(s) 701
GlaI GCGC 4 cut(s) 2181, 2565, 3080, 3526
GsaI CCCAGC 3 cut(s) 785, 2814, 2874
HaeII RGCGCY 1 cut(s) 3528
HaeIII GGCC 3 cut(s) 2034, 3061, 3261
HapII CCGG 6 cut(s) 11, 528, 606, 1133, 3062, 3278
HgaI GACGC 1 cut(s) 1723
HhaI GCGC 4 cut(s) 2182, 2566, 3081, 3527
Hin6I GCGC 4 cut(s) 2180, 2564, 3079, 3525
HinP1I GCGC 4 cut(s) 2180, 2564, 3079, 3525
HincII GTYRAC 1 cut(s) 3040
HindII GTYRAC 1 cut(s) 3040
HindIII AAGCTT 3 cut(s) 990, 1682, 3323
HpaII CCGG 6 cut(s) 11, 528, 606, 1133, 3062, 3278
Hpy166II GTNNAC 9 cut(s) 147, 277, 723, 944, 1837, 2125, 2147, 2783, 3040
Hpy8I GTNNAC 9 cut(s) 147, 277, 723, 944, 1837, 2125, 2147, 2783, 3040
HspAI GCGC 4 cut(s) 2180, 2564, 3079, 3525
Kpn2I TCCGGA 2 cut(s) 10, 1132
Ksp22I TGATCA 2 cut(s) 435, 597
Kzo9I GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
LweI GCATC 7 cut(s) 933, 1013, 1243, 1390, 1794, 2924, 3319
MaeIII GTNAC 7 cut(s) 359, 1417, 2425, 2617, 2958, 3010, 3302
MalI GATC 8 cut(s) 437, 599, 614, 788, 911, 1321, 1912, 2285
MboI GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
MfeI CAATTG 6 cut(s) 235, 1185, 1227, 1304, 2430, 3594
MflI RGATCY 2 cut(s) 909, 2283
MhlI GDGCHC 8 cut(s) 701, 1507, 1600, 2127, 2149, 2322, 2649, 3549
MlyI GAGTC 2 cut(s) 1598, 1619
MmeI TCCRAC 5 cut(s) 302, 605, 2098, 2515, 3562
MroI TCCGGA 2 cut(s) 10, 1132
MroXI GAANNNNTTC 2 cut(s) 378, 2161
MseI TTAA 5 cut(s) 1898, 2009, 2189, 3615, 3739
MslI CAYNNNNRTG 6 cut(s) 1667, 1715, 2130, 2720, 3596, 3702
MspA1I CMGCKG 4 cut(s) 1206, 1424, 1531, 2810
MspI CCGG 6 cut(s) 11, 528, 606, 1133, 3062, 3278
MspR9I CCNGG 3 cut(s) 529, 606, 2955
MunI CAATTG 6 cut(s) 235, 1185, 1227, 1304, 2430, 3594
MvaI CCWGG 1 cut(s) 2955
MvnI CGCG 1 cut(s) 2501
NciI CCSGG 2 cut(s) 529, 606
NcoI CCATGG 2 cut(s) 1650, 2367
NdeII GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
NheI GCTAGC 3 cut(s) 1795, 2467, 3725
NlaIV GGNNCC 7 cut(s) 118, 492, 1201, 2676, 3295, 3491, 3709
NmuCI GTSAC 4 cut(s) 1417, 2425, 2958, 3302
NruI TCGCGA 1 cut(s) 2501
NspI RCATGY 2 cut(s) 145, 1352
NspV TTCGAA 3 cut(s) 1273, 1696, 2155
OliI CACNNNNGTG 3 cut(s) 1667, 3596, 3702
PaqCI CACCTGC 1 cut(s) 334
PceI AGGCCT 1 cut(s) 2034
PdmI GAANNNNTTC 2 cut(s) 378, 2161
PflFI GACNNNGTC 1 cut(s) 2393
PleI GAGTC 2 cut(s) 1598, 1618
PpsI GAGTC 2 cut(s) 1598, 1618
PshAI GACNNNNGTC 1 cut(s) 1622
PsiI TTATAA 2 cut(s) 2223, 2604
Psp124BI GAGCTC 1 cut(s) 701
Psp6I CCWGG 1 cut(s) 2953
PspFI CCCAGC 3 cut(s) 781, 2810, 2870
PspGI CCWGG 1 cut(s) 2953
PspN4I GGNNCC 7 cut(s) 118, 492, 1201, 2676, 3295, 3491, 3709
PspPI GGNCC 4 cut(s) 1624, 2488, 3568, 3588
PstI CTGCAG 1 cut(s) 2911
PstNI CAGNNNCTG 4 cut(s) 349, 1427, 1964, 2870
PsuI RGATCY 2 cut(s) 909, 2283
PsyI GACNNNGTC 1 cut(s) 2393
PvuII CAGCTG 2 cut(s) 1424, 2810
RruI TCGCGA 1 cut(s) 2501
RsaI GTAC 8 cut(s) 197, 368, 424, 752, 936, 1363, 2848, 2986
RsaNI GTAC 8 cut(s) 196, 367, 423, 751, 935, 1362, 2847, 2985
RseI CAYNNNNRTG 6 cut(s) 1667, 1715, 2130, 2720, 3596, 3702
SacI GAGCTC 1 cut(s) 701
SaqAI TTAA 5 cut(s) 1898, 2009, 2189, 3615, 3739
Sau3AI GATC 8 cut(s) 435, 597, 612, 786, 909, 1319, 1910, 2283
Sau96I GGNCC 4 cut(s) 1624, 2488, 3568, 3588
ScaI AGTACT 4 cut(s) 368, 424, 2848, 2986
SchI GAGTC 2 cut(s) 1598, 1619
ScrFI CCNGG 3 cut(s) 529, 606, 2955
SduI GDGCHC 8 cut(s) 701, 1507, 1600, 2127, 2149, 2322, 2649, 3549
SfaNI GCATC 7 cut(s) 933, 1013, 1243, 1390, 1794, 2924, 3319
SfcI CTRYAG 4 cut(s) 816, 1689, 1965, 2907
SfuI TTCGAA 3 cut(s) 1273, 1696, 2155
SinI GGWCC 4 cut(s) 1624, 2488, 3568, 3588
SmiMI CAYNNNNRTG 6 cut(s) 1667, 1715, 2130, 2720, 3596, 3702
SmlI CTYRAG 2 cut(s) 3632, 3692
SmoI CTYRAG 2 cut(s) 3632, 3692
SpeI ACTAGT 2 cut(s) 2785, 2987
SseBI AGGCCT 1 cut(s) 2034
SsiI CCGC 7 cut(s) 51, 1206, 1531, 1715, 1905, 1996, 2486
SspI AATATT 1 cut(s) 2655
SstI GAGCTC 1 cut(s) 701
StuI AGGCCT 1 cut(s) 2034
StyD4I CCNGG 3 cut(s) 527, 604, 2953
StyI CCWWGG 4 cut(s) 951, 1650, 2367, 2895
TaqII GACCGA 2 cut(s) 1044, 3585
TatI WGTACW 4 cut(s) 366, 422, 2846, 2984
Tru1I TTAA 5 cut(s) 1898, 2009, 2189, 3615, 3739
Tru9I TTAA 5 cut(s) 1898, 2009, 2189, 3615, 3739
TscAI CASTG 9 cut(s) 340, 522, 1626, 1729, 1891, 2741, 2952, 3204, 3262
TseFI GTSAC 4 cut(s) 1417, 2425, 2958, 3302
Tsp45I GTSAC 4 cut(s) 1417, 2425, 2958, 3302
TspGWI ACGGA 2 cut(s) 556, 3290
TspRI CASTG 9 cut(s) 340, 522, 1626, 1729, 1891, 2741, 2952, 3204, 3262
Tth111I GACNNNGTC 1 cut(s) 2393
VneI GTGCAC 2 cut(s) 2123, 2145
VpaK11BI GGWCC 4 cut(s) 1624, 2488, 3568, 3588
XagI CCTNNNNNAGG 1 cut(s) 3554
XapI RAATTY 5 cut(s) 69, 1097, 1849, 2151, 3380
XceI RCATGY 2 cut(s) 145, 1352
XmiI GTMKAC 3 cut(s) 146, 276, 1836
XmnI GAANNNNTTC 2 cut(s) 378, 2161
ZrmI AGTACT 4 cut(s) 368, 424, 2848, 2986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.