Rmu_sc0001084.1_g000003

Multidrug resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001084.1
Physical Location & Seq
Reverse (-)
10768 .. 17334
6567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001084.1_g000003.1.cds

Sequence Viewer

Length: 4023 bp
atgcgtgtgttggagcaggcgtgttggggcagcagcatcaacaagtggcagcaaacagcaggttcagcagcagttttggacagcagcaagcagcagtttctgcagcaggagcctgcaagtagactgacgtgcacaggaaaggagaaggatgcaatcggtgtgtgttggtgctgcaggggcagcagggatgcgtgcgcaggggcgcgtaggtgctgcaggggtaggttagagatggggaagaaaggcgggttgttcaggtatgcagatggtgttgacaagttactgatggtgtttggaactttgggtagcattggagatgggttgatgacaccgcttacaatgtttgtgctcagccgcgtcatcaataagtatggagctgcaactcttactttctctaacgacattgtcgacgagtactcactcaagctgctcagtgtagcaattggagttggaatatctgctttcattgaagggttttgttggactagaactgctgagagacagacatccagaatgagaatggaatacttaaaatcagtcctcaggcaagacgttgcgttcttcgacagtcaagcaaattcttccatgaccttccaagtcatttccacaatctcttctgatgctcattttatccaagacacaatagctgagaagctaccaaattgcctggctcacctctcatcatttctgttctgctttcctgttgcctttgtgctgtcttggagattggcactggctgctcttccattctcggtcatgtttatcatccccggattgggatttgggaaagtaatgcaagacttgggagttaagataaatggtgcctatggagttgctggaggggtagcagaacaagcaatctcttcaatccgcacggtctattcttatgttggggagcgtcaaacactgaagaagttcagcattgctcttgagaaagttacacagcttggcataaagcaaggattcacaaagggattactaatagggagcatgggaatgatctatgctgcttgggcttttcaggcttgggttggaagcaaacttgttattgacagaggtgaaaagggtggcctcgtttttgtttctggaatctgtgtaattctgggaggattggccattatgaatgcacttccaaatctctccttcgtcactcaggcaagtactgctgctacccgaatatctgagatgattgatcgcgttccggttattgactctgaagatgaaaggggaaaagttttaccatatgtgaaaggagatattgagttcagaaaggttgacttcttctacccgtcaagacctgataccccaattcttcaaggactcagccttaaggttcaagctggtaagatgctgggtcttgttggaagcagtggctctggaaagtcaacaatcatttctttgcttgaaagattttatgatccagtaaaaggggaaattctccttgatggacacaaattaaagaagtttcagctgcactggttgagatcccagatggggctggttaatcaagaaccgattctctttgcaacatccataatagagaatattttatttgggaaggaaggagcttctatggaagacgtgacaagtgcagcaaaggctgcaaatgcacatgacttcattgttaaactacctgcaggatatcacactcaagttgggcaatttggagttcaattgtctggagggcaaaagcaaaggatttccattgcaagagcaataatcagagacccgaaaattcttttgcttgatgaagcaacaagtgctttggatgctcagtctgaaactattgtacaggaagccttagaccaagcatcgcaaggaagaacaaccattgtcatagctcaccacctcagcacaatacgtaaggctgatacaatagtggttcttcaatcagggagagtggttgagaagggatcccatgacgagttggtcaacatgagaaatggagaagctggagcttacaaaaaaatgctgcaattacagaaacaagccatggaaaatagtaaccccaacagaatggagcaacctcaaactccacagacaccaaggggtttggggtcaagctggcaaaatagcccaggaccactaagtgggagatcaagctggcacacaacaaagagtgttcactcaagctggcaaaacagcccactgaccccagcatatgcagtcaccccaatattttccattagtatagcgaactccatccaaactccccagtatgatgactttgacgatgaatggtcaaaagaaatctctaaaacctcctcatctcagtggcgtttgtttcaaatgaatgcaccagagtggaagcaagcaatactggggtgtctaggtgctgctagctttggaactcttcagccaattcatgcctactgcttaggaacagtagtgtcaatttactatggatcagacgattccaccatcagatcacagaccagattctactgctacatcttcttaggcttagcagttttcagcttctttgctaatctcctccagcattacaactttgcagtcatgggagagaaattatctgaaagagttcgaacaaaattgctagaaaagattcttacctttgagatagggtggtttgatcaagatgagaacacaagtgctgccatctgtgcccggctaaccactgaagccaacattgttagatcccttactgcagaccgtatctcattgttggttcaggttttcttcagtgccaccatagcttatatactcggattaatggtcacatggaggatagccattgtcatgattgcaatacaacctttgctcattggaagcttctattctaggagtgttttaatgaagagtatgtctagaaaagcacagaaagcacaggctgtaggtagtcaacttgcaagtgaagctactttcaaccacaggacaatcactgcattttcctcacagacaaggatattaaacctctttcgagatgctatgcaaggcccgaggaacgaaaacatcaaacagtcatgggttgcgggttttggtctgttcagctctcaatttttgaccacagctgctatagctttgacatattggtatggagggaggcttatgaatcagaacttactatcatcaacgcacctatttcaagttttcttcatcctaatgagcactggtaagaacatcgcagatgcaggaagcatgacttctgatcttgcaagaagtgggaaagccatcacctcaatattttctattctagatagagaaagtgagatttcttctgaggagcttaaaggggctaaaaagactttcaagggtcacatagagctgaaaaatgtggtattctcatacccagttaggcctgaccagatgatatttaaaggcttgaatctcaagattaaagctggaaacacaatggcactagtgggacagagtggttcagggaaatccactgtcattggcttgattgaaagattttacgatccactaaatggatccgtattcatagatggatgtgacatcaagcagtataacttgaagaacttgaggtcacagattgctttggtaagccaagagcctactctatttggaggcacaatccaagaaaacattgtatatggtaaagaaaatgcaacaatggctgaagtaaggaaggctgcaaaacaagccaatgctcatgagttcataagctccatggaaaatggatatgacacttattgtggagaaagaggagttcagctatcaggtggccagaagcagagaatagcacttgcccgagccatactaaagaacccaagtatccttctcttggatgaagcaaccagtgcccttgatagcgtgtcagagaatctagtccaagaagcactggagaagatgatggttggcagaacatgtgtagtggtagctcacaggttgtccacaatacaaaaagcagactccatagcggtgataatgaatgggaaagtagtagaacaaggatcacactctgaactggtttcaattggaagtagtggtgcctactactctttgataaaactacaaagcaatcaagcaatctcagcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

1340

Amino Acids

146.74

Weight (kDa)

9.11

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1928
Acc16I TGCGCA 1 cut(s) 196
Acc36I ACCTGC 2 cut(s) 50, 1642
AccB1I GGYRCC 2 cut(s) 821, 3971
AccB7I CCANNNNNTGG 2 cut(s) 2090, 3449
AccI GTMKAC 2 cut(s) 121, 408
AccII CGCG 3 cut(s) 205, 357, 1197
AciI CCGC 6 cut(s) 246, 332, 355, 871, 2993, 3902
AcoI YGGCCR 2 cut(s) 1113, 3706
AcsI RAATTY 3 cut(s) 577, 1434, 1734
AcuI CTGAAG 6 cut(s) 929, 1236, 2339, 2661, 2686, 3621
AdeI CACNNNGTG 1 cut(s) 2090
AfaI GTAC 3 cut(s) 416, 1162, 1791
AfiI CCNNNNNNNGG 7 cut(s) 775, 776, 1427, 1494, 2090, 3449, 3766
AflII CTTAAG 1 cut(s) 1328
AflIII ACRYGT 1 cut(s) 3848
AhlI ACTAGT 1 cut(s) 3379
AjiI CACGTC 2 cut(s) 129, 1582
AjnI CCWGG 2 cut(s) 666, 2077
AleI CACNNNNGTG 1 cut(s) 2302
Alw21I GWGCWC 3 cut(s) 134, 351, 3131
Alw26I GTCTC 2 cut(s) 493, 1719
Alw44I GTGCAC 1 cut(s) 130
AlwNI CAGNNNCTG 1 cut(s) 100
Ama87I CYCGRG 2 cut(s) 2959, 3732
AoxI GGCC 5 cut(s) 1069, 1113, 2956, 3317, 3706
ApaLI GTGCAC 1 cut(s) 130
ApoI RAATTY 3 cut(s) 577, 1434, 1734
AseI ATTAAT 1 cut(s) 2732
Asp700I GAANNNNTTC 4 cut(s) 914, 1515, 2541, 2565
AspLEI GCGC 2 cut(s) 197, 205
AspS9I GGNCC 2 cut(s) 2081, 2957
AsuC2I CCSGG 2 cut(s) 771, 2629
AsuHPI GGTGA 6 cut(s) 665, 1070, 1835, 2161, 3187, 3916
AsuII TTCGAA 1 cut(s) 2545
AsuNHI GCTAGC 1 cut(s) 2339
AvaI CYCGRG 2 cut(s) 2959, 3732
AvaII GGWCC 1 cut(s) 2081
AxyI CCTNAGG 1 cut(s) 542
BaeGI GKGCMC 3 cut(s) 134, 2629, 3787
BaeI ACNNNNGTAYC 4 cut(s) 1863, 1896, 3739, 3772
BalI TGGCCA 2 cut(s) 1115, 3708
BamHI GGATCC 2 cut(s) 1913, 3452
BanI GGYRCC 2 cut(s) 821, 3971
BbsI GAAGAC 1 cut(s) 1584
Bbv12I GWGCWC 3 cut(s) 134, 351, 3131
BbvCI CCTCAGC 1 cut(s) 1850
BciT130I CCWGG 2 cut(s) 668, 2079
BciVI GTATCC 1 cut(s) 3767
BclI TGATCA 1 cut(s) 2593
BcnI CCSGG 2 cut(s) 771, 2629
BcoDI GTCTC 2 cut(s) 493, 1719
BcuI ACTAGT 1 cut(s) 3379
BfaI CTAG 9 cut(s) 486, 2330, 2340, 2558, 2802, 2829, 3215, 3380, 3809
BfmI CTRYAG 7 cut(s) 101, 172, 214, 1635, 2667, 2853, 3036
BfrI CTTAAG 1 cut(s) 1328
BfuAI ACCTGC 2 cut(s) 50, 1642
BfuI GTATCC 1 cut(s) 3767
BlpI GCTNAGC 2 cut(s) 350, 2464
BmcAI AGTACT 2 cut(s) 416, 1162
Bme1390I CCNGG 4 cut(s) 668, 771, 2079, 2629
Bme18I GGWCC 1 cut(s) 2081
BmeT110I CYCGRG 2 cut(s) 2959, 3732
BmgBI CACGTC 2 cut(s) 129, 1582
BmgT120I GGNCC 2 cut(s) 2081, 2957
BmiI GGNNCC 5 cut(s) 111, 823, 1915, 3454, 3973
BmrFI CCNGG 4 cut(s) 668, 771, 2079, 2629
BmrI ACTGGG 3 cut(s) 2209, 2330, 3305
BmsI GCATC 9 cut(s) 45, 139, 178, 610, 1338, 1759, 1820, 2935, 3139
BmtI GCTAGC 1 cut(s) 2343
BmuI ACTGGG 3 cut(s) 2209, 2330, 3305
BpiI GAAGAC 1 cut(s) 1584
BpmI CTGGAG 5 cut(s) 858, 1701, 1974, 2480, 3845
Bpu10I CCTNAGC 2 cut(s) 1850, 2377
Bpu1102I GCTNAGC 2 cut(s) 350, 2464
Bpu14I TTCGAA 1 cut(s) 2545
BpuEI CTTGAG 6 cut(s) 407, 950, 1635, 2113, 3335, 3523
BpuMI CCSGG 2 cut(s) 771, 2629
BsaAI YACGTR 1 cut(s) 1862
BsaI GGTCTC 1 cut(s) 1719
BsaJI CCNNGG 6 cut(s) 769, 1992, 2045, 2077, 2960, 3651
BsaWI WCCGGW 1 cut(s) 1201
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 7 cut(s) 775, 776, 1427, 1494, 2090, 3449, 3766
Bse21I CCTNAGG 1 cut(s) 542
Bse3DI GCAATG 2 cut(s) 921, 1704
BseBI CCWGG 2 cut(s) 668, 2079
BseDI CCNNGG 6 cut(s) 769, 1992, 2045, 2077, 2960, 3651
BseLI CCNNNNNNNGG 7 cut(s) 775, 776, 1427, 1494, 2090, 3449, 3766
BseMI GCAATG 2 cut(s) 921, 1704
BseRI GAGGAG 4 cut(s) 2254, 2483, 3257, 3702
BseSI GKGCMC 3 cut(s) 134, 2629, 3787
BseYI CCCAGC 2 cut(s) 1351, 2155
BsgI GTGCAG 2 cut(s) 1457, 1611
Bsh1236I CGCG 3 cut(s) 205, 357, 1197
BshFI GGCC 5 cut(s) 1071, 1115, 2958, 3319, 3708
BshNI GGYRCC 2 cut(s) 821, 3971
BsiHKAI GWGCWC 3 cut(s) 134, 351, 3131
BsiHKCI CYCGRG 2 cut(s) 2959, 3732
BsiSI CCGG 3 cut(s) 771, 1202, 2629
BslFI GGGAC 1 cut(s) 3399
BslI CCNNNNNNNGG 7 cut(s) 775, 776, 1427, 1494, 2090, 3449, 3766
BsmAI GTCTC 2 cut(s) 493, 1719
BsmFI GGGAC 1 cut(s) 3399
BsmI GAATGC 2 cut(s) 1129, 2299
BsnI GGCC 5 cut(s) 1071, 1115, 2958, 3319, 3708
Bso31I GGTCTC 1 cut(s) 1719
BsoBI CYCGRG 2 cut(s) 2959, 3732
Bsp119I TTCGAA 1 cut(s) 2545
Bsp1286I GDGCHC 5 cut(s) 134, 351, 2629, 3131, 3787
Bsp1407I TGTACA 1 cut(s) 1789
Bsp1720I GCTNAGC 2 cut(s) 350, 2464
Bsp19I CCATGG 2 cut(s) 1992, 3651
BspACI CCGC 6 cut(s) 246, 332, 355, 871, 2993, 3902
BspANI GGCC 5 cut(s) 1071, 1115, 2958, 3319, 3708
BspFNI CGCG 3 cut(s) 205, 357, 1197
BspHI TCATGA 2 cut(s) 2760, 3634
BspLI GGNNCC 5 cut(s) 111, 823, 1915, 3454, 3973
BspMAI CTGCAG 5 cut(s) 105, 176, 218, 1639, 2671
BspMI ACCTGC 2 cut(s) 50, 1642
BspOI GCTAGC 1 cut(s) 2343
BspQI GCTCTTC 1 cut(s) 747
BspT104I TTCGAA 1 cut(s) 2545
BspT107I GGYRCC 2 cut(s) 821, 3971
BspTI CTTAAG 1 cut(s) 1328
BspTNI GGTCTC 1 cut(s) 1719
BsrDI GCAATG 2 cut(s) 921, 1704
BsrGI TGTACA 1 cut(s) 1789
BssECI CCNNGG 6 cut(s) 769, 1992, 2045, 2077, 2960, 3651
BssT1I CCWWGG 3 cut(s) 1992, 2045, 3651
Bst2UI CCWGG 2 cut(s) 668, 2079
Bst4CI ACNGT 6 cut(s) 569, 877, 2386, 2675, 2982, 3412
Bst6I CTCTTC 5 cut(s) 619, 747, 868, 2358, 2813
BstAFI CTTAAG 1 cut(s) 1328
BstAPI GCANNNNNTGC 6 cut(s) 100, 737, 1163, 1601, 1760, 3782
BstAUI TGTACA 1 cut(s) 1789
BstBAI YACGTR 1 cut(s) 1862
BstBI TTCGAA 1 cut(s) 2545
BstC8I GCNNGC 9 cut(s) 18, 89, 114, 193, 2066, 2105, 2135, 2313, 2341
BstDSI CCRYGG 2 cut(s) 1992, 3651
BstFNI CGCG 3 cut(s) 205, 357, 1197
BstHHI GCGC 2 cut(s) 197, 205
BstMAI GTCTC 2 cut(s) 493, 1719
BstNI CCWGG 2 cut(s) 668, 2079
BstNSI RCATGY 1 cut(s) 3852
BstSCI CCNGG 4 cut(s) 666, 769, 2077, 2627
BstSFI CTRYAG 7 cut(s) 101, 172, 214, 1635, 2667, 2853, 3036
BstSLI GKGCMC 3 cut(s) 134, 2629, 3787
BstSNI TACGTA 1 cut(s) 1862
BstUI CGCG 3 cut(s) 205, 357, 1197
BstV2I GAAGAC 1 cut(s) 1584
BstX2I RGATCY 4 cut(s) 1484, 1913, 2657, 3452
BstXI CCANNNNNNTGG 1 cut(s) 2017
BstYI RGATCY 4 cut(s) 1484, 1913, 2657, 3452
Bsu36I CCTNAGG 1 cut(s) 542
BsuI GTATCC 1 cut(s) 3767
BsuRI GGCC 5 cut(s) 1071, 1115, 2958, 3319, 3708
BtgI CCRYGG 2 cut(s) 1992, 3651
BtgZI GCGATG 2 cut(s) 1797, 3127
BtrI CACGTC 2 cut(s) 129, 1582
BtsI GCAGTG 2 cut(s) 1375, 2901
BveI ACCTGC 2 cut(s) 50, 1642
Cac8I GCNNGC 9 cut(s) 18, 89, 114, 193, 2066, 2105, 2135, 2313, 2341
CaiI CAGNNNCTG 1 cut(s) 100
CciI TCATGA 2 cut(s) 2760, 3634
CfoI GCGC 2 cut(s) 197, 205
Cfr13I GGNCC 2 cut(s) 2081, 2957
CseI GACGC 2 cut(s) 346, 887
Csp6I GTAC 3 cut(s) 415, 1161, 1790
CspCI CAANNNNNGTGG 2 cut(s) 3397, 3432
CviQI GTAC 3 cut(s) 415, 1161, 1790
DraI TTTAAA 1 cut(s) 3337
DraIII CACNNNGTG 1 cut(s) 2090
DrdI GACNNNNNNGTC 1 cut(s) 1928
DseDI GACNNNNNNGTC 1 cut(s) 1928
EaeI YGGCCR 2 cut(s) 1113, 3706
Eam1104I CTCTTC 5 cut(s) 619, 747, 868, 2358, 2813
EarI CTCTTC 5 cut(s) 619, 747, 868, 2358, 2813
Eco105I TACGTA 1 cut(s) 1862
Eco130I CCWWGG 3 cut(s) 1992, 2045, 3651
Eco147I AGGCCT 1 cut(s) 3319
Eco31I GGTCTC 1 cut(s) 1719
Eco32I GATATC 1 cut(s) 1643
Eco47I GGWCC 1 cut(s) 2081
Eco57I CTGAAG 6 cut(s) 929, 1236, 2339, 2661, 2686, 3621
Eco81I CCTNAGG 1 cut(s) 542
Eco88I CYCGRG 2 cut(s) 2959, 3732
EcoRII CCWGG 2 cut(s) 666, 2077
EcoRV GATATC 1 cut(s) 1643
EcoT14I CCWWGG 3 cut(s) 1992, 2045, 3651
ErhI CCWWGG 3 cut(s) 1992, 2045, 3651
FalI AAGNNNNNCTT 4 cut(s) 1262, 1294, 3148, 3180
FaqI GGGAC 1 cut(s) 3399
FauI CCCGC 2 cut(s) 239, 2986
FauNDI CATATG 2 cut(s) 1243, 2161
FbaI TGATCA 1 cut(s) 2593
FblI GTMKAC 2 cut(s) 121, 408
FspBI CTAG 9 cut(s) 486, 2330, 2340, 2558, 2802, 2829, 3215, 3380, 3809
FspI TGCGCA 1 cut(s) 196
GlaI GCGC 2 cut(s) 196, 204
GsaI CCCAGC 2 cut(s) 1355, 2159
GsuI CTGGAG 5 cut(s) 858, 1701, 1974, 2480, 3845
HaeIII GGCC 5 cut(s) 1071, 1115, 2958, 3319, 3708
HapII CCGG 3 cut(s) 771, 1202, 2629
HgaI GACGC 2 cut(s) 346, 887
HhaI GCGC 2 cut(s) 197, 205
Hin6I GCGC 2 cut(s) 195, 203
HinP1I GCGC 2 cut(s) 195, 203
HincII GTYRAC 6 cut(s) 274, 409, 1276, 1386, 1933, 2864
HindII GTYRAC 6 cut(s) 274, 409, 1276, 1386, 1933, 2864
HindIII AAGCTT 1 cut(s) 2791
HpaII CCGG 3 cut(s) 771, 1202, 2629
HphI GGTGA 6 cut(s) 665, 1070, 1835, 2161, 3187, 3916
Hpy99I CGWCG 1 cut(s) 413
HpyAV CCTTC 9 cut(s) 139, 464, 601, 1153, 1552, 1556, 1903, 3604, 3770
HpyCH4III ACNGT 6 cut(s) 569, 877, 2386, 2675, 2982, 3412
HpyCH4IV ACGT 4 cut(s) 128, 552, 1581, 1861
HpySE526I ACGT 4 cut(s) 128, 552, 1581, 1861
HspAI GCGC 2 cut(s) 195, 203
Ksp22I TGATCA 1 cut(s) 2593
LguI GCTCTTC 1 cut(s) 747
LweI GCATC 9 cut(s) 45, 139, 178, 610, 1338, 1759, 1820, 2935, 3139
MaeI CTAG 9 cut(s) 486, 2330, 2340, 2558, 2802, 2829, 3215, 3380, 3809
MaeII ACGT 4 cut(s) 128, 552, 1581, 1861
MfeI CAATTG 3 cut(s) 441, 1673, 3957
MflI RGATCY 4 cut(s) 1484, 1913, 2657, 3452
MhlI GDGCHC 5 cut(s) 134, 351, 2629, 3131, 3787
MlsI TGGCCA 2 cut(s) 1115, 3708
MluNI TGGCCA 2 cut(s) 1115, 3708
MlyI GAGTC 3 cut(s) 1205, 1314, 3887
MmeI TCCRAC 4 cut(s) 430, 461, 1012, 1342
Mox20I TGGCCA 2 cut(s) 1115, 3708
MroXI GAANNNNTTC 4 cut(s) 914, 1515, 2541, 2565
MscI TGGCCA 2 cut(s) 1115, 3708
MslI CAYNNNNRTG 6 cut(s) 995, 2272, 2302, 2759, 3122, 3902
Msp20I TGGCCA 2 cut(s) 1115, 3708
MspA1I CMGCKG 2 cut(s) 1471, 3032
MspCI CTTAAG 1 cut(s) 1328
MspI CCGG 3 cut(s) 771, 1202, 2629
MspR9I CCNGG 4 cut(s) 668, 771, 2079, 2629
MunI CAATTG 3 cut(s) 441, 1673, 3957
Mva1269I GAATGC 2 cut(s) 1129, 2299
MvaI CCWGG 2 cut(s) 668, 2079
MvnI CGCG 3 cut(s) 205, 357, 1197
NciI CCSGG 2 cut(s) 771, 2629
NcoI CCATGG 2 cut(s) 1992, 3651
NdeI CATATG 2 cut(s) 1243, 2161
NheI GCTAGC 1 cut(s) 2339
NlaIV GGNNCC 5 cut(s) 111, 823, 1915, 3454, 3973
NmuCI GTSAC 7 cut(s) 1147, 1582, 2167, 2737, 3275, 3473, 3507
NsbI TGCGCA 1 cut(s) 196
NspI RCATGY 1 cut(s) 3852
NspV TTCGAA 1 cut(s) 2545
OliI CACNNNNGTG 1 cut(s) 2302
PagI TCATGA 2 cut(s) 2760, 3634
PceI AGGCCT 1 cut(s) 3319
PciI ACATGT 1 cut(s) 3848
PciSI GCTCTTC 1 cut(s) 747
PcsI WCGNNNNNNNCGW 1 cut(s) 405
PctI GAATGC 2 cut(s) 1129, 2299
PdmI GAANNNNTTC 4 cut(s) 914, 1515, 2541, 2565
PfeI GAWTC 9 cut(s) 963, 1089, 1516, 2414, 2439, 2566, 3073, 3346, 3805
PflFI GACNNNGTC 1 cut(s) 404
PflMI CCANNNNNTGG 2 cut(s) 2090, 3449
PleI GAGTC 3 cut(s) 1205, 1314, 3887
PpsI GAGTC 3 cut(s) 1205, 1314, 3887
Ppu21I YACGTR 1 cut(s) 1862
PscI ACATGT 1 cut(s) 3848
PshBI ATTAAT 1 cut(s) 2732
Psp6I CCWGG 2 cut(s) 666, 2077
PspFI CCCAGC 2 cut(s) 1351, 2155
PspGI CCWGG 2 cut(s) 666, 2077
PspN4I GGNNCC 5 cut(s) 111, 823, 1915, 3454, 3973
PspPI GGNCC 2 cut(s) 2081, 2957
PstI CTGCAG 5 cut(s) 105, 176, 218, 1639, 2671
PstNI CAGNNNCTG 1 cut(s) 100
PsuI RGATCY 4 cut(s) 1484, 1913, 2657, 3452
PsyI GACNNNGTC 1 cut(s) 404
PvuII CAGCTG 2 cut(s) 1471, 3032
RsaI GTAC 3 cut(s) 416, 1162, 1791
RsaNI GTAC 3 cut(s) 415, 1161, 1790
RseI CAYNNNNRTG 6 cut(s) 995, 2272, 2302, 2759, 3122, 3902
SalI GTCGAC 1 cut(s) 407
SapI GCTCTTC 1 cut(s) 747
Sau96I GGNCC 2 cut(s) 2081, 2957
SbfI CCTGCAGG 1 cut(s) 1639
ScaI AGTACT 2 cut(s) 416, 1162
SchI GAGTC 3 cut(s) 1205, 1314, 3887
ScrFI CCNGG 4 cut(s) 668, 771, 2079, 2629
SdaI CCTGCAGG 1 cut(s) 1639
SduI GDGCHC 5 cut(s) 134, 351, 2629, 3131, 3787
SfaNI GCATC 9 cut(s) 45, 139, 178, 610, 1338, 1759, 1820, 2935, 3139
SfcI CTRYAG 7 cut(s) 101, 172, 214, 1635, 2667, 2853, 3036
SfuI TTCGAA 1 cut(s) 2545
SinI GGWCC 1 cut(s) 2081
SmiMI CAYNNNNRTG 6 cut(s) 995, 2272, 2302, 2759, 3122, 3902
SmlI CTYRAG 7 cut(s) 422, 929, 1328, 1650, 2128, 3350, 3502
SmoI CTYRAG 7 cut(s) 422, 929, 1328, 1650, 2128, 3350, 3502
SnaBI TACGTA 1 cut(s) 1862
SpeI ACTAGT 1 cut(s) 3379
Sse8387I CCTGCAGG 1 cut(s) 1639
SseBI AGGCCT 1 cut(s) 3319
SsiI CCGC 6 cut(s) 246, 332, 355, 871, 2993, 3902
SspI AATATT 3 cut(s) 1546, 2178, 3204
SspMI CTAG 9 cut(s) 486, 2330, 2340, 2558, 2802, 2829, 3215, 3380, 3809
StuI AGGCCT 1 cut(s) 3319
StyD4I CCNGG 4 cut(s) 666, 769, 2077, 2627
StyI CCWWGG 3 cut(s) 1992, 2045, 3651
TaaI ACNGT 6 cut(s) 569, 877, 2386, 2675, 2982, 3412
TaiI ACGT 4 cut(s) 131, 555, 1584, 1864
TaqI TCGA 4 cut(s) 408, 564, 2545, 2941
TaqII GACCGA 1 cut(s) 742
TatI WGTACW 3 cut(s) 414, 1160, 1789
TauI GCSGC 1 cut(s) 357
TfiI GAWTC 9 cut(s) 963, 1089, 1516, 2414, 2439, 2566, 3073, 3346, 3805
TseFI GTSAC 7 cut(s) 1147, 1582, 2167, 2737, 3275, 3473, 3507
Tsp45I GTSAC 7 cut(s) 1147, 1582, 2167, 2737, 3275, 3473, 3507
TspGWI ACGGA 1 cut(s) 3445
Tth111I GACNNNGTC 1 cut(s) 404
Van91I CCANNNNNTGG 2 cut(s) 2090, 3449
Vha464I CTTAAG 1 cut(s) 1328
VneI GTGCAC 1 cut(s) 130
VpaK11BI GGWCC 1 cut(s) 2081
VspI ATTAAT 1 cut(s) 2732
XapI RAATTY 3 cut(s) 577, 1434, 1734
XbaI TCTAGA 2 cut(s) 2828, 3214
XceI RCATGY 1 cut(s) 3852
XcmI CCANNNNNNNNNTGG 1 cut(s) 517
XmiI GTMKAC 2 cut(s) 121, 408
XmnI GAANNNNTTC 4 cut(s) 914, 1515, 2541, 2565
XspI CTAG 9 cut(s) 486, 2330, 2340, 2558, 2802, 2829, 3215, 3380, 3809
ZrmI AGTACT 2 cut(s) 416, 1162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.