Rmu_ssc0000389.1_g000016

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000389.1
Physical Location & Seq
Reverse (-)
97739 .. 102693
4955 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000389.1_g000016.1.cds

Sequence Viewer

Length: 3525 bp
atgcgctccgttttcatgcacgccgatggtgtcgataaagtcctgatgatctttggattgttgggagccatcggcgatggctgctctactccatttgtcttgctaatcactggccgcttgatgaacaatgtcggcggcgcctcaagtgacgctcaagatgttttcttgcataacatcaatatgaatgcagtggcgctattgtacttggcttgcggatcatgggtcagttgtttcctggagggttattgttggacaagaactggtgagagacaagcagctagaatgagagtaacatatttgaaagcagttctaaggcaagatgtgggttactttgatctgcatgtcacaagcacatctgaggtcatcaccagcatctctagtgatagcctcgtgattcaagacttcctcagtgaaaaggtgccaaactttataatgaactgctctttgttctttgggagctatgtggcggcattcataatgttgtggaggctagccatcgttgcatttccgtttgtggtacttctggtaattccgggattgatttacggaaggattttgatgggactggctaggcagattagagatgaatacaacaagactggaacaatagcagaacaggcactgtcatcaatcagaaccgtttacgcgtttgttggggaaacgaaaacaatttcggagttctctgcagctctacaaggctcagtgaagctgggattgagtcaaggcctggcaaaaggcttggccattggtagcaacggcatcgcttttgctatttggtctttcatgtcctactatggcagcagaatggtcatgtatcatggcgcacttggaggcactgttgtatcagctggtactggaataatccttggtggattggcattcggaagagggctatcaaacctgaagtacttctcggaagcgtgctcagcatcagagcgaataatggaggtgatacggagagtccccaagatcgactcagacaacatggaaggtgaaatgctagagaacgtttacggagaagtcgaattcaagcgcgttgacttcgcttacccttcaaggccagaaagcatcatctgcaacaactttaacttgacggttccagctgggaaaactgtggcattggtgggtgggagtggctcgggaaagtcgacagtgatttctttgctgcagagattttatgatccacttggaggtgagatactcattgatggggtggccattaaaaattgtcagctcaagtggcttcggtcccagatggggcaggtgagccaagagcctgctctttttgcaaccagcataaaagagaacatactgtttgggaaggaagatgctgacattgaagatgttatagaggctggtaaagcttctaatgctcacaatttcatctctcagttgcctctgggatatgacacacagactccgaatcgatcggagcgtgtagtccaagaagctctggacaaagcagcggtgggacgtacgaccatcatcatcgcccaccgcctctccaccatccgaaacgccgacgtcattgttgtcgttcaaaacgggcaggtcatggagacaggctcacacgacgaactattccaacgtgaaaatggcctctacacttcgcttgtccgtttacaacaaacagatcaagcacattgtgcatcatcctctatttcaaacatggacattcatgacacgagcaatcgtcggctttcgatggttagccgttcgagttctgccaactcatttgagggtcgagcttcgtcggttcatggtggggaagatgagaccgtagaagttaagaagctgcctgtcccgtcttttcaaagattgatggctttgaaccttccggagtggaaacaagcgcttttggggtgcttcggtgcgatattgttcggtgcagttcagccgctgtttgcattcactctggggtcgacggtgtcagtttacttcttggtggagcacgatgagatcaaggagaagacaagaatctattctctgtgttttgttgggttggctattctctcctttctagttaacctttgccagcattacaactttgcctacatgggagagtacttgactaagagaattagagagaagatgctttcaaagatacttacatttgaagctgggtggtttgatcaggatgagaattccagtggtgccatatgctctagactcgccaaagatgccaatgtggtgagatctttagtgggtgatcggctttctctacttgtacaaaccttctcagctgtgacagtagcaggcacaatgggtttggtcattgcatggaggctggcctcagttatgatagcactgcaacccatcactattctgtgctactacaccaggagtatccttctccaaagcatgtcaagcaaagccaccaaagctcaagatgaaagtagcaagctagctgcagaggcagtctccaacctcagaaccatcactgctttctcgtctcaagaccgcctgttgaaaatgctcgaaaaggcccaagaaggcccgcgtaaggagagcattcgacaatcatggtttgcgggtattgctcttggttgttctcaaggtcttaacactatcacctgggcttttgacttttggtacggaggcaagctcgtcgccaagggctacataactgcgaaagcactgtttcggacgtacatgatattgctgagcacgggtcgggtcattgcggaagccggaagtatgacttcggaccttgtgaaaggctcggacgctgttgcgtccgtatttgccgtgttggaccggtacacaaatatagaaccggaagacccggaaggttgcaaacccaaaagtataacgggtcatatagaacttcatgacatacattttgcgtaccccaccaggcccgatgtgatgatcttgaagggattctcaataaatatcgaagcgagaaaatcaacagctttggtgggaaaaagtgggtccggaaaatcaacaatcatcggattaattgagagattttacgatccactcaaaggagaagtaagaatcgatggtcgagatatggtacgactttatctcaggatgttaaggaaacacatagccttggttagccaagagccaacattattttcaggcaccataagagaaaacatcatatacggcatgtcagataagattgacgaattggagataatcgaagcagctaaggcagccaatgctcatgatttcatctcgggactcaaggagggatacaacacctcatgtggtaacagaggagtacaactgtctggggtgcaagatgcggcgaccagctctcttgatagtcaatcagagaaggtggtgcaagatgcgctagagcgcgtgatggtggggaggactagtgtggtggtggcacacaggttaagtaccatacaacactgtgatcttatcactgtccttgataaagggagggtagtcgagaaagggagtcacccgtctcttttggccaaagggcctaagggttcttactactcattggttagcctgcagaggacaccatctggatcagagcttaccaaattgccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

1174

Amino Acids

128.34

Weight (kDa)

7.96

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 431
AarI CACCTGC 1 cut(s) 1252
AatII GACGTC 1 cut(s) 1527
Acc36I ACCTGC 2 cut(s) 1252, 1540
AccB1I GGYRCC 4 cut(s) 137, 418, 2153, 3092
AccI GTMKAC 2 cut(s) 1148, 1922
AccII CGCG 4 cut(s) 647, 1035, 2500, 3318
AccIII TCCGGA 2 cut(s) 1837, 2939
AclI AACGTT 1 cut(s) 1008
AclWI GGATC 4 cut(s) 223, 1175, 2975, 3508
AcoI YGGCCR 4 cut(s) 112, 741, 1215, 3441
AcsI RAATTY 2 cut(s) 1025, 2143
AcuI CTGAAG 1 cut(s) 923
AcyI GRCGYC 2 cut(s) 138, 1524
AdeI CACNNNGTG 1 cut(s) 1646
AfeI AGCGCT 1 cut(s) 1854
AfiI CCNNNNNNNGG 4 cut(s) 1190, 1257, 2503, 2990
AflIII ACRYGT 1 cut(s) 645
AgeI ACCGGT 1 cut(s) 2757
AhlI ACTAGT 1 cut(s) 3335
AjnI CCWGG 5 cut(s) 234, 726, 2339, 2573, 2855
AjuI GAANNNNNNNTTGG 2 cut(s) 3070, 3102
Alw21I GWGCWC 3 cut(s) 926, 1953, 2669
Alw26I GTCTC 6 cut(s) 262, 1553, 1769, 2425, 2457, 3438
AlwI GGATC 4 cut(s) 223, 1175, 2975, 3508
AlwNI CAGNNNCTG 2 cut(s) 622, 1900
Ama87I CYCGRG 2 cut(s) 1138, 3190
Aor13HI TCCGGA 2 cut(s) 1837, 2939
Aor51HI AGCGCT 1 cut(s) 1854
ApoI RAATTY 2 cut(s) 1025, 2143
ArsI GACNNNNNNTTYG 2 cut(s) 2825, 2857
AseI ATTAAT 1 cut(s) 2963
AsiGI ACCGGT 1 cut(s) 2757
Asp700I GAANNNNTTC 3 cut(s) 908, 1981, 2882
AspLEI GCGC 8 cut(s) 6, 140, 196, 824, 1035, 1855, 3310, 3318
AspS9I GGNCC 8 cut(s) 1248, 2485, 2495, 2707, 2755, 2859, 2937, 3449
AsuC2I CCSGG 2 cut(s) 534, 2786
AsuNHI GCTAGC 2 cut(s) 490, 2404
AvaI CYCGRG 2 cut(s) 1138, 3190
AvaII GGWCC 4 cut(s) 1248, 2707, 2755, 2937
AxyI CCTNAGG 1 cut(s) 3453
BaeI ACNNNNGTAYC 2 cut(s) 825, 858
BalI TGGCCA 3 cut(s) 743, 1217, 3443
BanI GGYRCC 4 cut(s) 137, 418, 2153, 3092
BauI CACGAG 2 cut(s) 389, 1684
BbsI GAAGAC 2 cut(s) 1976, 2787
Bbv12I GWGCWC 3 cut(s) 926, 1953, 2669
BceAI ACGGC 4 cut(s) 772, 1698, 2732, 3133
BcgI CGANNNNNNTGC 4 cut(s) 742, 776, 2590, 2624
BciT130I CCWGG 5 cut(s) 236, 728, 2341, 2575, 2857
BciVI GTATCC 2 cut(s) 2357, 3200
BclI TGATCA 1 cut(s) 2131
BcnI CCSGG 2 cut(s) 534, 2786
BcoDI GTCTC 6 cut(s) 262, 1553, 1769, 2425, 2457, 3438
BcuI ACTAGT 1 cut(s) 3335
BfmI CTRYAG 4 cut(s) 684, 1166, 2409, 3482
BfoI RGCGCY 3 cut(s) 141, 197, 1856
BfuAI ACCTGC 2 cut(s) 1252, 1540
BfuI GTATCC 2 cut(s) 2357, 3200
BglII AGATCT 1 cut(s) 2195
BlpI GCTNAGC 2 cut(s) 925, 2663
BmcAI AGTACT 2 cut(s) 908, 2066
Bme1390I CCNGG 7 cut(s) 236, 534, 728, 2341, 2575, 2786, 2857
Bme18I GGWCC 4 cut(s) 1248, 2707, 2755, 2937
BmeT110I CYCGRG 2 cut(s) 1138, 3190
BmgT120I GGNCC 8 cut(s) 1248, 2485, 2495, 2707, 2755, 2859, 2937, 3449
BmiI GGNNCC 8 cut(s) 67, 139, 420, 1098, 1250, 2155, 2938, 3094
BmrFI CCNGG 7 cut(s) 236, 534, 728, 2341, 2575, 2786, 2857
BmtI GCTAGC 2 cut(s) 494, 2408
BpiI GAAGAC 2 cut(s) 1976, 2787
BplI GAGNNNNNCTC 6 cut(s) 1550, 1582, 2405, 2437, 2589, 2621
BpmI CTGGAG 1 cut(s) 257
Bpu10I CCTNAGC 1 cut(s) 3162
Bpu1102I GCTNAGC 2 cut(s) 925, 2663
BpuEI CTTGAG 7 cut(s) 127, 138, 1220, 2370, 2439, 2538, 3182
BpuMI CCSGG 2 cut(s) 534, 2786
Bsa29I ATCGAT 2 cut(s) 1426, 3006
BsaHI GRCGYC 2 cut(s) 138, 1524
BsaI GGTCTC 1 cut(s) 1769
BsaJI CCNNGG 4 cut(s) 865, 2574, 2613, 3060
BsaWI WCCGGW 4 cut(s) 1837, 2757, 2776, 2939
BsaXI ACNNNNNCTCC 8 cut(s) 822, 852, 1402, 1432, 1487, 1517, 3322, 3352
Bsc4I CCNNNNNNNGG 4 cut(s) 1190, 1257, 2503, 2990
Bse118I RCCGGY 1 cut(s) 2757
Bse1I ACTGG 6 cut(s) 115, 265, 570, 604, 859, 2148
Bse21I CCTNAGG 1 cut(s) 3453
Bse3DI GCAATG 2 cut(s) 2274, 2679
BseAI TCCGGA 2 cut(s) 1837, 2939
BseBI CCWGG 5 cut(s) 236, 728, 2341, 2575, 2857
BseCI ATCGAT 2 cut(s) 1426, 3006
BseDI CCNNGG 4 cut(s) 865, 2574, 2613, 3060
BseGI GGATG 4 cut(s) 1509, 1652, 2143, 3045
BseLI CCNNNNNNNGG 4 cut(s) 1190, 1257, 2503, 2990
BseMI GCAATG 2 cut(s) 2274, 2679
BseNI ACTGG 6 cut(s) 115, 265, 570, 604, 859, 2148
BseRI GAGGAG 1 cut(s) 3246
BseYI CCCAGC 3 cut(s) 709, 1103, 2120
BsgI GTGCAG 1 cut(s) 1908
Bsh1236I CGCG 4 cut(s) 647, 1035, 2500, 3318
Bsh1285I CGRYCG 1 cut(s) 1430
BshNI GGYRCC 4 cut(s) 137, 418, 2153, 3092
BshTI ACCGGT 1 cut(s) 2757
BshVI ATCGAT 2 cut(s) 1426, 3006
BsiEI CGRYCG 1 cut(s) 1430
BsiHKAI GWGCWC 3 cut(s) 926, 1953, 2669
BsiHKCI CYCGRG 2 cut(s) 1138, 3190
BsiSI CCGG 7 cut(s) 533, 1838, 2691, 2758, 2777, 2786, 2940
BsiWI CGTACG 1 cut(s) 1475
BslFI GGGAC 6 cut(s) 576, 947, 1234, 1485, 1787, 3207
BslI CCNNNNNNNGG 4 cut(s) 1190, 1257, 2503, 2990
BsmAI GTCTC 6 cut(s) 262, 1553, 1769, 2425, 2457, 3438
BsmBI CGTCTC 2 cut(s) 2457, 3438
BsmFI GGGAC 6 cut(s) 576, 947, 1234, 1485, 1787, 3207
BsmI GAATGC 5 cut(s) 190, 470, 878, 1907, 2511
Bso31I GGTCTC 1 cut(s) 1769
BsoBI CYCGRG 2 cut(s) 1138, 3190
Bsp1286I GDGCHC 3 cut(s) 926, 1953, 2669
Bsp13I TCCGGA 2 cut(s) 1837, 2939
Bsp1407I TGTACA 1 cut(s) 2227
Bsp1720I GCTNAGC 2 cut(s) 925, 2663
BspDI ATCGAT 2 cut(s) 1426, 3006
BspEI TCCGGA 2 cut(s) 1837, 2939
BspFNI CGCG 4 cut(s) 647, 1035, 2500, 3318
BspHI TCATGA 3 cut(s) 1678, 2830, 3178
BspLI GGNNCC 8 cut(s) 67, 139, 420, 1098, 1250, 2155, 2938, 3094
BspMAI CTGCAG 4 cut(s) 688, 1170, 2413, 3486
BspMI ACCTGC 2 cut(s) 1252, 1540
BspOI GCTAGC 2 cut(s) 494, 2408
BspPI GGATC 4 cut(s) 223, 1175, 2975, 3508
BspT107I GGYRCC 4 cut(s) 137, 418, 2153, 3092
BspTNI GGTCTC 1 cut(s) 1769
BsrDI GCAATG 2 cut(s) 2274, 2679
BsrFI RCCGGY 1 cut(s) 2757
BsrGI TGTACA 1 cut(s) 2227
BsrI ACTGG 6 cut(s) 115, 265, 570, 604, 859, 2148
BssAI RCCGGY 1 cut(s) 2757
BssECI CCNNGG 4 cut(s) 865, 2574, 2613, 3060
BssNI GRCGYC 2 cut(s) 138, 1524
BssSI CACGAG 2 cut(s) 389, 1684
BssT1I CCWWGG 3 cut(s) 865, 2613, 3060
Bst2BI CACGAG 2 cut(s) 389, 1684
Bst2UI CCWGG 5 cut(s) 236, 728, 2341, 2575, 2857
Bst6I CTCTTC 1 cut(s) 880
BstACI GRCGYC 2 cut(s) 138, 1524
BstAPI GCANNNNNTGC 3 cut(s) 1074, 1646, 3173
BstAUI TGTACA 1 cut(s) 2227
BstF5I GGATG 4 cut(s) 1509, 1652, 2143, 3045
BstFNI CGCG 4 cut(s) 647, 1035, 2500, 3318
BstH2I RGCGCY 3 cut(s) 141, 197, 1856
BstHHI GCGC 8 cut(s) 6, 140, 196, 824, 1035, 1855, 3310, 3318
BstMAI GTCTC 6 cut(s) 262, 1553, 1769, 2425, 2457, 3438
BstMCI CGRYCG 1 cut(s) 1430
BstNI CCWGG 5 cut(s) 236, 728, 2341, 2575, 2857
BstNSI RCATGY 3 cut(s) 344, 2365, 3124
BstSCI CCNGG 7 cut(s) 234, 532, 726, 2339, 2573, 2784, 2855
BstSFI CTRYAG 4 cut(s) 684, 1166, 2409, 3482
BstUI CGCG 4 cut(s) 647, 1035, 2500, 3318
BstV2I GAAGAC 2 cut(s) 1976, 2787
BstX2I RGATCY 1 cut(s) 2195
BstYI RGATCY 1 cut(s) 2195
Bsu15I ATCGAT 2 cut(s) 1426, 3006
Bsu36I CCTNAGG 1 cut(s) 3453
BsuI GTATCC 2 cut(s) 2357, 3200
BsuTUI ATCGAT 2 cut(s) 1426, 3006
BtgZI GCGATG 3 cut(s) 90, 745, 1474
BtsCI GGATG 4 cut(s) 1509, 1652, 2143, 3045
BtsI GCAGTG 3 cut(s) 195, 2306, 2439
BveI ACCTGC 2 cut(s) 1252, 1540
CaiI CAGNNNCTG 2 cut(s) 622, 1900
CciI TCATGA 3 cut(s) 1678, 2830, 3178
CfoI GCGC 8 cut(s) 6, 140, 196, 824, 1035, 1855, 3310, 3318
Cfr10I RCCGGY 1 cut(s) 2757
Cfr13I GGNCC 8 cut(s) 1248, 2485, 2495, 2707, 2755, 2859, 2937, 3449
ClaI ATCGAT 2 cut(s) 1426, 3006
CseI GACGC 3 cut(s) 158, 2724, 2735
CspAI ACCGGT 1 cut(s) 2757
DinI GGCGCC 1 cut(s) 139
DraIII CACNNNGTG 1 cut(s) 1646
EaeI YGGCCR 4 cut(s) 112, 741, 1215, 3441
Eam1104I CTCTTC 1 cut(s) 880
EarI CTCTTC 1 cut(s) 880
Eco130I CCWWGG 3 cut(s) 865, 2613, 3060
Eco147I AGGCCT 1 cut(s) 726
Eco31I GGTCTC 1 cut(s) 1769
Eco47I GGWCC 4 cut(s) 1248, 2707, 2755, 2937
Eco47III AGCGCT 1 cut(s) 1854
Eco57I CTGAAG 1 cut(s) 923
Eco81I CCTNAGG 1 cut(s) 3453
Eco88I CYCGRG 2 cut(s) 1138, 3190
EcoO109I RGGNCCY 1 cut(s) 3449
EcoRI GAATTC 2 cut(s) 1025, 2143
EcoRII CCWGG 5 cut(s) 234, 726, 2339, 2573, 2855
EcoT14I CCWWGG 3 cut(s) 865, 2613, 3060
EgeI GGCGCC 1 cut(s) 139
EheI GGCGCC 1 cut(s) 139
ErhI CCWWGG 3 cut(s) 865, 2613, 3060
Esp3I CGTCTC 2 cut(s) 2457, 3438
FalI AAGNNNNNCTT 2 cut(s) 2686, 2718
FaqI GGGAC 6 cut(s) 576, 947, 1234, 1485, 1787, 3207
FauI CCCGC 2 cut(s) 2505, 2524
FauNDI CATATG 1 cut(s) 2159
FbaI TGATCA 1 cut(s) 2131
FblI GTMKAC 2 cut(s) 1148, 1922
FokI GGATG 4 cut(s) 1496, 1639, 2150, 3052
GlaI GCGC 8 cut(s) 5, 139, 195, 823, 1034, 1854, 3309, 3317
GsaI CCCAGC 3 cut(s) 713, 1107, 2124
GsuI CTGGAG 1 cut(s) 257
HaeII RGCGCY 3 cut(s) 141, 197, 1856
HapII CCGG 7 cut(s) 533, 1838, 2691, 2758, 2777, 2786, 2940
HgaI GACGC 3 cut(s) 158, 2724, 2735
HhaI GCGC 8 cut(s) 6, 140, 196, 824, 1035, 1855, 3310, 3318
Hin1I GRCGYC 2 cut(s) 138, 1524
Hin6I GCGC 8 cut(s) 4, 138, 194, 822, 1033, 1853, 3308, 3316
HinP1I GCGC 8 cut(s) 4, 138, 194, 822, 1033, 1853, 3308, 3316
HincII GTYRAC 4 cut(s) 1039, 1149, 1923, 2026
HindII GTYRAC 4 cut(s) 1039, 1149, 1923, 2026
HindIII AAGCTT 1 cut(s) 1362
HpaI GTTAAC 1 cut(s) 2026
HpaII CCGG 7 cut(s) 533, 1838, 2691, 2758, 2777, 2786, 2940
Hpy166II GTNNAC 9 cut(s) 643, 1012, 1039, 1149, 1622, 1923, 1936, 2026, 2763
Hpy8I GTNNAC 9 cut(s) 643, 1012, 1039, 1149, 1622, 1923, 1936, 2026, 2763
Hpy99I CGWCG 6 cut(s) 1526, 1577, 1698, 1756, 1927, 2612
HpyCH4IV ACGT 5 cut(s) 1008, 1474, 1524, 1588, 2648
HpySE526I ACGT 5 cut(s) 1008, 1474, 1524, 1588, 2648
Hsp92I GRCGYC 2 cut(s) 138, 1524
HspAI GCGC 8 cut(s) 4, 138, 194, 822, 1033, 1853, 3308, 3316
KasI GGCGCC 1 cut(s) 137
Kpn2I TCCGGA 2 cut(s) 1837, 2939
Ksp22I TGATCA 1 cut(s) 2131
KspAI GTTAAC 1 cut(s) 2026
LmnI GCTCC 5 cut(s) 11, 65, 456, 1432, 1948
MaeII ACGT 5 cut(s) 1008, 1474, 1524, 1588, 2648
MaeIII GTNAC 7 cut(s) 146, 289, 326, 343, 2245, 3224, 3425
MboII GAAGA 7 cut(s) 897, 1337, 1352, 1781, 1981, 2101, 2792
MflI RGATCY 1 cut(s) 2195
MhlI GDGCHC 3 cut(s) 926, 1953, 2669
MlsI TGGCCA 3 cut(s) 743, 1217, 3443
MluI ACGCGT 1 cut(s) 645
MluNI TGGCCA 3 cut(s) 743, 1217, 3443
Mly113I GGCGCC 1 cut(s) 138
MlyI GAGTC 7 cut(s) 727, 968, 969, 1411, 2163, 3189, 3433
MmeI TCCRAC 4 cut(s) 230, 1609, 2448, 2733
Mox20I TGGCCA 3 cut(s) 743, 1217, 3443
MroI TCCGGA 2 cut(s) 1837, 2939
MroXI GAANNNNTTC 3 cut(s) 908, 1981, 2882
MscI TGGCCA 3 cut(s) 743, 1217, 3443
MseI TTAA 8 cut(s) 1086, 1221, 1788, 2025, 2562, 2963, 3044, 3359
MslI CAYNNNNRTG 2 cut(s) 24, 179
Msp20I TGGCCA 3 cut(s) 743, 1217, 3443
MspA1I CMGCKG 5 cut(s) 848, 1103, 1466, 1900, 2243
MspI CCGG 7 cut(s) 533, 1838, 2691, 2758, 2777, 2786, 2940
MspR9I CCNGG 7 cut(s) 236, 534, 728, 2341, 2575, 2786, 2857
Mva1269I GAATGC 5 cut(s) 190, 470, 878, 1907, 2511
MvaI CCWGG 5 cut(s) 236, 728, 2341, 2575, 2857
MvnI CGCG 4 cut(s) 647, 1035, 2500, 3318
NarI GGCGCC 1 cut(s) 138
NciI CCSGG 2 cut(s) 534, 2786
NdeI CATATG 1 cut(s) 2159
NheI GCTAGC 2 cut(s) 490, 2404
NlaIV GGNNCC 8 cut(s) 67, 139, 420, 1098, 1250, 2155, 2938, 3094
NmuCI GTSAC 4 cut(s) 146, 343, 2245, 3425
NspI RCATGY 3 cut(s) 344, 2365, 3124
PagI TCATGA 3 cut(s) 1678, 2830, 3178
PaqCI CACCTGC 1 cut(s) 1252
PceI AGGCCT 1 cut(s) 726
PcsI WCGNNNNNNNCGW 3 cut(s) 1020, 1145, 1432
PctI GAATGC 5 cut(s) 190, 470, 878, 1907, 2511
PdmI GAANNNNTTC 3 cut(s) 908, 1981, 2882
PfeI GAWTC 5 cut(s) 394, 1423, 1977, 2883, 3003
Pfl23II CGTACG 1 cut(s) 1475
PflFI GACNNNGTC 1 cut(s) 1927
PfoI TCCNGGA 2 cut(s) 234, 532
PinAI ACCGGT 1 cut(s) 2757
Ple19I CGATCG 1 cut(s) 1430
PleI GAGTC 7 cut(s) 726, 968, 968, 1411, 2163, 3189, 3432
PluTI GGCGCC 1 cut(s) 141
PpsI GAGTC 7 cut(s) 726, 968, 968, 1411, 2163, 3189, 3432
PshBI ATTAAT 1 cut(s) 2963
PsiI TTATAA 1 cut(s) 431
Psp1406I AACGTT 1 cut(s) 1008
Psp6I CCWGG 5 cut(s) 234, 726, 2339, 2573, 2855
PspFI CCCAGC 3 cut(s) 709, 1103, 2120
PspGI CCWGG 5 cut(s) 234, 726, 2339, 2573, 2855
PspLI CGTACG 1 cut(s) 1475
PspN4I GGNNCC 8 cut(s) 67, 139, 420, 1098, 1250, 2155, 2938, 3094
PspPI GGNCC 8 cut(s) 1248, 2485, 2495, 2707, 2755, 2859, 2937, 3449
PstI CTGCAG 4 cut(s) 688, 1170, 2413, 3486
PstNI CAGNNNCTG 2 cut(s) 622, 1900
PsuI RGATCY 1 cut(s) 2195
PsyI GACNNNGTC 1 cut(s) 1927
PvuI CGATCG 1 cut(s) 1430
PvuII CAGCTG 3 cut(s) 848, 1103, 2243
RseI CAYNNNNRTG 2 cut(s) 24, 179
SalI GTCGAC 2 cut(s) 1147, 1921
SaqAI TTAA 8 cut(s) 1086, 1221, 1788, 2025, 2562, 2963, 3044, 3359
Sau96I GGNCC 8 cut(s) 1248, 2485, 2495, 2707, 2755, 2859, 2937, 3449
ScaI AGTACT 2 cut(s) 908, 2066
SchI GAGTC 7 cut(s) 727, 968, 969, 1411, 2163, 3189, 3433
ScrFI CCNGG 7 cut(s) 236, 534, 728, 2341, 2575, 2786, 2857
SduI GDGCHC 3 cut(s) 926, 1953, 2669
SfcI CTRYAG 4 cut(s) 684, 1166, 2409, 3482
SfoI GGCGCC 1 cut(s) 139
SinI GGWCC 4 cut(s) 1248, 2707, 2755, 2937
SmiMI CAYNNNNRTG 2 cut(s) 24, 179
SmlI CTYRAG 7 cut(s) 142, 153, 1235, 2385, 2454, 2553, 3197
SmoI CTYRAG 7 cut(s) 142, 153, 1235, 2385, 2454, 2553, 3197
SpeI ACTAGT 1 cut(s) 3335
SseBI AGGCCT 1 cut(s) 726
SspDI GGCGCC 1 cut(s) 137
StuI AGGCCT 1 cut(s) 726
StyD4I CCNGG 7 cut(s) 234, 532, 726, 2339, 2573, 2784, 2855
StyI CCWWGG 3 cut(s) 865, 2613, 3060
TaiI ACGT 5 cut(s) 1011, 1477, 1527, 1591, 2651
TaqII GACCGA 1 cut(s) 1236
TatI WGTACW 5 cut(s) 201, 906, 2064, 2227, 3235
TauI GCSGC 5 cut(s) 117, 138, 470, 1900, 3263
TfiI GAWTC 5 cut(s) 394, 1423, 1977, 2883, 3003
Tru1I TTAA 8 cut(s) 1086, 1221, 1788, 2025, 2562, 2963, 3044, 3359
Tru9I TTAA 8 cut(s) 1086, 1221, 1788, 2025, 2562, 2963, 3044, 3359
TseFI GTSAC 4 cut(s) 146, 343, 2245, 3425
Tsp45I GTSAC 4 cut(s) 146, 343, 2245, 3425
TspGWI ACGGA 7 cut(s) 498, 561, 970, 1029, 1607, 2610, 2728
Tth111I GACNNNGTC 1 cut(s) 1927
VpaK11BI GGWCC 4 cut(s) 1248, 2707, 2755, 2937
VspI ATTAAT 1 cut(s) 2963
XapI RAATTY 2 cut(s) 1025, 2143
XbaI TCTAGA 1 cut(s) 2165
XceI RCATGY 3 cut(s) 344, 2365, 3124
XcmI CCANNNNNNNNNTGG 1 cut(s) 1592
XmiI GTMKAC 2 cut(s) 1148, 1922
XmnI GAANNNNTTC 3 cut(s) 908, 1981, 2882
ZraI GACGTC 1 cut(s) 1525
ZrmI AGTACT 2 cut(s) 908, 2066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.