Rw5G024000

Multidrug pheromone exporter, MDR family, ABC transporter family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
34057026 .. 34061925
4900 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G024000.1

Sequence Viewer

Length: 3759 bp
ATGGGGCTCCAAAACAGCATGTTTCGCTATGCAGACAGCACAGACAAGTTGCTGATGTTTTTTGGGACTGTAGGCAGCATTGGTGATGGGTTGCAGAACCCTCTCATGATGTTCATTCTTAGTGAGGTGATCAACTCGTATGGAAGTTCCAGTGGCGCTTTGACTAATGCTGATGTAGACAAGTTTGCACTCAGGCTATTCTATGTTGCTATTGGAGTTGGACTTGCTGCATTTGTTGAAGGGTTATGTTGGACAAGAACCGCAGAGAGGCAGACTTCGAGAATGAGAATGAAGTATCTTAATTCTGTTCTCAAACAAGAAGTTTCCTTCTTTGACACCCAGACTGCTGGTTCTTCAACAACCTTCCAAGTTATTTCAATCATCTCCTCTGATGCCAATGCAGTCCAAGTTGCCTTATGCGAGAAGATACCTGACTGCATAGCATACATGTCAACTTTCTTCTTCTGCCATATATTTGCCTTCACACTTTCATGGAGGTTGGCCTTGGCTGCGATGCCACTTTCAATCTCGTTCATAGCTCCAGGGCTTTTCTTTGGAAGTATCTTGATGGGCCTTGTAATGAAGGGAATTGGGGCTTATGGAGTTGCCGGAGGGATTGCTGAACAAGCAATTTCTTCAGTAAGAACTGTATATTCATATGTTGGGGAGAACCAAACACTAAAGAGGTTCAGCATTGCACTTCAGACTGTTACCAAAATTGGAATCAAGGTGGGTCTTGTGAAAGGAATCCTGATGGGAAGCATGGGAGTCATTTACGTCGGTTGGGGTTTTCAGGCATGGGTTGGGACTTATTTGGTTACTCAAAAAGGAGAAGATGGAGGGCATGTCTTCGTAGCCGGTTTCAATGTCCTCATGGGAGGCCTGAGTATTTTAAGTGCACTTCCAAATTTAACTGCCATCACAGAGGCATTAGCTGCTACAACACGAATTCTTGAAATGATTGACCGTGTTCCTAGTATTGAAACCGAAGACAGAAAGGGGAAGGCTTTGTCACATGTGAGAGGAGAAATAGAGTTCCAGGACATATACTTCAGTTACCCATCAAGACCTGACAGCCAAGTCTTACAAGGCTTGAATCTTAAGATTCCGGCTGGTAAGAGTGTAGGTCTAGTTGGGGGAAGTGGTTCTGGCAAGTCGACAATCATTTCATTGATCGAAAGATTTTATGACCCGGTTGAAGGAGAAATACTCTTGGATGGACATGCAATCAGAAGACTTCAACCGAAATGGTTGAGATCCCAAATGGGTTTAGTTAATCAGGAACCTGTTCTGTTTGCAACTTCCATAAGAGAGAACATACTTTTCGGAAAGGAAGGAGCTTCAATGGATGAAATAACAAATGCAGCTAAAGCTGCAAATGCACATGACTTCATTGTCAAGTTACCTGATGGATATGAAACTCAAGCTGGTCAATTTGGATTCCAACTGTCTGGTGGGCAAAAACAGCGAATAGCCATAGCGAGAGCTCTGCTCAGGAATCCGAAAATCTTACTTCTTGATGAAGCAACTAGTGCATTGGATGCACAGTCTGAAAGAGTAGACAACATCATTATTGCCCATCGCCTGTCAACAATCCGAACGGCAAACTTGATTGTGGTTCTTCAATCTGGGAAAGTAATTGAATCAGGCTCGCACAATGAGCTAATGAGAAAGAATGGGGAGCAGAGAGGTGAATACTTAAAGATGGTCCAGTTGCAGCAGATGGCAACCCAAAATGAAGATCCAGAGGATAGTCAAGTATATGAAAAACCTCGGCGTAGGAGGAGTGTTGCACCAAGCCCCATTAGTGCCCGATCTAGTACTCACAACACTCCAATATACTCCTTCAGTGGTACCGGAATGTCCATCTCTATGGGTACCCCCGTGTCCATGGGGACACCCAGGTCCACCATGGGCACACCCTATTCGTTCTCTGTCCAATACGATCCTGATGATGGGAGTTATGATGAAGACTTAAAGAACTCAACTTATCCTCCTCCTTCTCAATGGCGCCTGCTGAAGATGAATGCACCAGAGTGGGGACAAGCATTACTTGGATGCTTGGGTGCAATAGGTTCTGGAGCAGTACAACCTATTAATGCCTACTGTGTAGGCTCACTTATATCAGTCTACTTCCTCCAGGATAAATCAGAAATCAAGTCCCAATCAAGAGTCTTGACCTTTGTTTTCATAGGCATTGGTGTTTTCAACTTCATCACCAATCTCATCCAACACTATAACTTTGCAATTATGGGAGAAAAGTTGACCACAAGGGTAAGAGAGCAACTGCTTGAAAAGCTTATGACGTTCGAAATTGGGTGGTTTGATGAAGATGAGAACACAAGTGCAGCTATCTGTGCAAGGCTAGCCACTGAAGTAAACATGGTTCGATCTCTTGTTGGTGACAGAATGTCATTGCTGGTCCAAGCAGTTTTCGGGGCTACCTTTGCTTACACAGTAGGACTTGTGCTGACATGGAGACTGTCCCTTGTGATGATAGCAGTGCAGCCACTAGTCATTGGGAGCTTTTATGCAAGGAGTATCTTGATGAAGAGTATGGGTGAGAAGGCGAGAAAAGCTCAAAAAGAAGGAAGCCAATTGGCAAGTGAAGCTGTTATTAACCACAGAACTATAACAGCCTTCTCTTCACAGAAAAAGATTCTGGGGCTGTTTGGTGCAACCTTGGCTGGTCCTAAGAAGGAGAGTATCAAGCAATCCTATGTTTCTGGTGCTGGCTTGTTTAGCTCCCAATTCTTTAACACGGCTACAGCTTTAGCCTACTGGTATGGTGGGAGGCTACTGGTGCTAGAGTTGATAACCCCAAAGCATCTTTTTCAGGCCTTCTTGATATTGCTGTTCACTGCTTATATTATTGCAGAAGCTGGAAGCATGACTTCTGATATATCTAAAGGGGCCAATGCCATTCAAGCGGTTTTTGCAATTTTAGATAGGAAAACTGAGATTGATCCGGACAACAAATGGGGACTGGAGATAAAGAGGAGGATGAAGGGGCGTGTCGAGCTCAAAAATGTTTTCTTTGCATATCCAACAAGACCTCAGCAGATGATTCTTAAGGGACTGAGCCTCAGAATTGATGCAGGCAAAACTGTGGCACTAGTTGGGCAGAGTGGTTCAGGCAAATCCACCATTATTGGGCTGATTGAGAGGTTTTATGATCCAATGAAGGGATCAGTATTTATAGATGAGCAGGATATTAAGAACTACAACTTGAGACTGCTAAGGGCACATGTAGCCTTGGTTAGTCAGGAGCCTACTTTGTTTGCTGGAACTATCCGTGAAAATATCGCCTATGGTAAAGAGAATTCAAAGGAATCTGATATAAAGAGGGCTGCAGTTGTGGCCAATGCTCATGAATTTATAAGTGGGATGAATGATGGTTATAACACATACTGTGGAGAGAGAGGAGTTCAGCTATCAGGAGGCCAGAAACAAAGGATTGCACTAGCTCGGGCGATTCTGAAGAATCCATCAATCCTCCTCCTGGATGAGGCCACAAGTGCACTTGACAGCGTGTCAGAAAACGCAGTTCAAGAAGCACTAGAGAAGATGATGGTTAAGAGAACATGTATAGTCATTGCTCACCGGCTATCCACAATACAGAAGGCCAACTCCATTGCTGTGATAAAGAATGGAAAGGTTGCGGAACAAGGTTCACATAACGAACTGATTTCATTAGGGCGCAACGGAGCATATTACTCACTGATAAAGCTACAAACTGGTAGCTCACCTCCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1252

Amino Acids

136.83

Weight (kDa)

9.15

Isoelectric Point (pI)

37.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 19 - 293 2.8e-39 ABC transporter transmembrane region
ABC_tran PF00005 362 - 511 2.2e-33 ABC transporter
ABC_membrane PF00664 685 - 955 1.2e-42 ABC transporter transmembrane region
ABC_tran PF00005 1024 - 1173 1.1e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3380, 3402
AasI GACNNNNNNGTC 3 cut(s) 1079, 1394, 1903
Acc65I GGTACC 2 cut(s) 1853, 1877
AccB1I GGYRCC 3 cut(s) 1853, 1877, 2010
AccI GTMKAC 4 cut(s) 177, 1157, 1560, 2130
AccIII TCCGGA 1 cut(s) 2968
AciI CCGC 3 cut(s) 261, 2930, 3662
AclWI GGATC 6 cut(s) 1251, 1736, 1940, 2960, 3170, 3196
AcoI YGGCCR 1 cut(s) 3360
AcsI RAATTY 4 cut(s) 907, 948, 3322, 3374
AcuI CTGAAG 7 cut(s) 621, 686, 1036, 1831, 2039, 2394, 3500
AcyI GRCGYC 1 cut(s) 2011
AfaI GTAC 4 cut(s) 1822, 1855, 1879, 2088
AfiI CCNNNNNNNGG 8 cut(s) 267, 1199, 1955, 2039, 3153, 3185, 3502, 3508
AflII CTTAAG 2 cut(s) 1100, 3071
AflIII ACRYGT 4 cut(s) 447, 1015, 3247, 3584
AhdI GACNNNNNGTC 2 cut(s) 2410, 3532
AhlI ACTAGT 3 cut(s) 1529, 2512, 3115
AjnI CCWGG 5 cut(s) 541, 1038, 1901, 2139, 3501
AleI CACNNNNGTG 1 cut(s) 2035
Alw21I GWGCWC 4 cut(s) 901, 1489, 3024, 3523
Alw26I GTCTC 2 cut(s) 2473, 3226
Alw44I GTGCAC 2 cut(s) 897, 3519
AlwI GGATC 6 cut(s) 1251, 1736, 1940, 2960, 3170, 3196
AlwNI CAGNNNCTG 1 cut(s) 2882
Ama87I CYCGRG 1 cut(s) 3468
Aor13HI TCCGGA 1 cut(s) 2968
AoxI GGCC 9 cut(s) 501, 571, 880, 2838, 2913, 3360, 3442, 3510, 3624
ApaLI GTGCAC 2 cut(s) 897, 3519
ApoI RAATTY 4 cut(s) 907, 948, 3322, 3374
AseI ATTAAT 1 cut(s) 2097
Asp700I GAANNNNTTC 2 cut(s) 1144, 1287
Asp718I GGTACC 2 cut(s) 1853, 1877
AspLEI GCGC 3 cut(s) 158, 2013, 3702
AspS9I GGNCC 6 cut(s) 571, 1708, 1905, 2422, 2690, 2913
AsuC2I CCSGG 1 cut(s) 1193
AsuHPI GGTGA 8 cut(s) 95, 139, 1703, 2209, 2414, 2573, 3593, 3738
AsuII TTCGAA 1 cut(s) 2310
AsuNHI GCTAGC 1 cut(s) 2365
AvaI CYCGRG 1 cut(s) 3468
AvaII GGWCC 4 cut(s) 1708, 1905, 2422, 2690
BaeGI GKGCMC 5 cut(s) 901, 1813, 1919, 3247, 3523
BaeI ACNNNNGTAYC 2 cut(s) 1869, 1902
BalI TGGCCA 1 cut(s) 3362
BanI GGYRCC 3 cut(s) 1853, 1877, 2010
BanII GRGCYC 3 cut(s) 9, 1489, 3024
BarI GAAGNNNNNNTAC 2 cut(s) 1191, 1223
BbsI GAAGAC 4 cut(s) 841, 996, 1240, 1977
Bbv12I GWGCWC 4 cut(s) 901, 1489, 3024, 3523
BbvCI CCTCAGC 1 cut(s) 3057
BceAI ACGGC 2 cut(s) 1617, 2778
BcgI CGANNNNNNTGC 2 cut(s) 1471, 1505
BciT130I CCWGG 5 cut(s) 543, 1040, 1903, 2141, 3503
BclI TGATCA 1 cut(s) 129
BcnI CCSGG 1 cut(s) 1193
BcoDI GTCTC 2 cut(s) 2473, 3226
BcuI ACTAGT 3 cut(s) 1529, 2512, 3115
BfmI CTRYAG 3 cut(s) 69, 2766, 3351
BfoI RGCGCY 2 cut(s) 159, 2014
BfrI CTTAAG 2 cut(s) 1100, 3071
BmcAI AGTACT 1 cut(s) 1822
Bme1390I CCNGG 6 cut(s) 543, 1040, 1193, 1903, 2141, 3503
Bme18I GGWCC 4 cut(s) 1708, 1905, 2422, 2690
BmeRI GACNNNNNGTC 2 cut(s) 2410, 3532
BmeT110I CYCGRG 1 cut(s) 3468
BmgT120I GGNCC 6 cut(s) 571, 1708, 1905, 2422, 2690, 2913
BmiI GGNNCC 7 cut(s) 8, 1284, 1855, 1879, 2012, 2914, 3270
BmrFI CCNGG 6 cut(s) 543, 1040, 1193, 1903, 2141, 3503
BmsI GCATC 6 cut(s) 382, 504, 1531, 2048, 2836, 3085
BmtI GCTAGC 1 cut(s) 2369
BpiI GAAGAC 4 cut(s) 841, 996, 1240, 1977
BplI GAGNNNNNCTC 6 cut(s) 1194, 1226, 1476, 1508, 2563, 2595
BpmI CTGGAG 4 cut(s) 525, 2100, 2123, 3008
Bpu10I CCTNAGC 3 cut(s) 1493, 3057, 3239
Bpu14I TTCGAA 1 cut(s) 2310
BpuEI CTTGAG 2 cut(s) 1407, 3250
BpuMI CCSGG 1 cut(s) 1193
BsaHI GRCGYC 1 cut(s) 2011
BsaJI CCNNGG 9 cut(s) 504, 542, 1772, 1890, 1901, 1911, 2682, 3255, 3752
BsaWI WCCGGW 2 cut(s) 1856, 2968
BsaXI ACNNNNNCTCC 4 cut(s) 831, 861, 1978, 2008
Bsc4I CCNNNNNNNGG 8 cut(s) 267, 1199, 1955, 2039, 3153, 3185, 3502, 3508
Bse118I RCCGGY 2 cut(s) 857, 3603
Bse1I ACTGG 6 cut(s) 150, 1711, 2786, 2805, 2991, 3742
Bse3DI GCAATG 4 cut(s) 693, 2414, 3594, 3633
BseAI TCCGGA 1 cut(s) 2968
BseBI CCWGG 5 cut(s) 543, 1040, 1903, 2141, 3503
BseDI CCNNGG 9 cut(s) 504, 542, 1772, 1890, 1901, 1911, 2682, 3255, 3752
BseGI GGATG 8 cut(s) 1222, 1354, 1546, 2063, 2226, 3009, 3393, 3511
BseLI CCNNNNNNNGG 8 cut(s) 267, 1199, 1955, 2039, 3153, 3185, 3502, 3508
BseMI GCAATG 4 cut(s) 693, 2414, 3594, 3633
BseMII CTCAG 7 cut(s) 205, 875, 1507, 2949, 3071, 3071, 3100
BseNI ACTGG 6 cut(s) 150, 1711, 2786, 2805, 2991, 3742
BseRI GAGGAG 7 cut(s) 376, 1038, 1798, 1986, 3013, 3438, 3488
BseSI GKGCMC 5 cut(s) 901, 1813, 1919, 3247, 3523
BsgI GTGCAG 2 cut(s) 2367, 2525
BshFI GGCC 9 cut(s) 503, 573, 882, 2840, 2915, 3362, 3444, 3512, 3626
BshNI GGYRCC 3 cut(s) 1853, 1877, 2010
BsiHKAI GWGCWC 4 cut(s) 901, 1489, 3024, 3523
BsiHKCI CYCGRG 1 cut(s) 3468
BsiSI CCGG 7 cut(s) 609, 858, 1109, 1193, 1857, 2969, 3604
BslFI GGGAC 8 cut(s) 79, 820, 1909, 2055, 2146, 2470, 2997, 3090
BslI CCNNNNNNNGG 8 cut(s) 267, 1199, 1955, 2039, 3153, 3185, 3502, 3508
BsmAI GTCTC 2 cut(s) 2473, 3226
BsmFI GGGAC 8 cut(s) 79, 820, 1909, 2055, 2146, 2470, 2997, 3090
BsmI GAATGC 1 cut(s) 2032
BsnI GGCC 9 cut(s) 503, 573, 882, 2840, 2915, 3362, 3444, 3512, 3626
BsoBI CYCGRG 1 cut(s) 3468
Bsp119I TTCGAA 1 cut(s) 2310
Bsp1286I GDGCHC 8 cut(s) 9, 901, 1489, 1813, 1919, 3024, 3247, 3523
Bsp13I TCCGGA 1 cut(s) 2968
Bsp19I CCATGG 2 cut(s) 1890, 1911
BspACI CCGC 3 cut(s) 261, 2930, 3662
BspANI GGCC 9 cut(s) 503, 573, 882, 2840, 2915, 3362, 3444, 3512, 3626
BspCNI CTCAG 7 cut(s) 204, 876, 1506, 2950, 3070, 3072, 3099
BspEI TCCGGA 1 cut(s) 2968
BspHI TCATGA 2 cut(s) 105, 3370
BspLI GGNNCC 7 cut(s) 8, 1284, 1855, 1879, 2012, 2914, 3270
BspMAI CTGCAG 1 cut(s) 3355
BspOI GCTAGC 1 cut(s) 2369
BspPI GGATC 6 cut(s) 1251, 1736, 1940, 2960, 3170, 3196
BspT104I TTCGAA 1 cut(s) 2310
BspT107I GGYRCC 3 cut(s) 1853, 1877, 2010
BspTI CTTAAG 2 cut(s) 1100, 3071
BsrDI GCAATG 4 cut(s) 693, 2414, 3594, 3633
BsrFI RCCGGY 2 cut(s) 857, 3603
BsrI ACTGG 6 cut(s) 150, 1711, 2786, 2805, 2991, 3742
BssAI RCCGGY 2 cut(s) 857, 3603
BssECI CCNNGG 9 cut(s) 504, 542, 1772, 1890, 1901, 1911, 2682, 3255, 3752
BssNI GRCGYC 1 cut(s) 2011
BssT1I CCWWGG 6 cut(s) 504, 1890, 1911, 2682, 3255, 3752
Bst2UI CCWGG 5 cut(s) 543, 1040, 1903, 2141, 3503
Bst6I CTCTTC 2 cut(s) 2546, 2650
BstACI GRCGYC 1 cut(s) 2011
BstAFI CTTAAG 2 cut(s) 1100, 3071
BstAPI GCANNNNNTGC 3 cut(s) 935, 1532, 1541
BstBI TTCGAA 1 cut(s) 2310
BstC8I GCNNGC 5 cut(s) 1652, 2015, 2367, 2734, 3100
BstDSI CCRYGG 2 cut(s) 1890, 1911
BstENI CCTNNNNNAGG 1 cut(s) 3506
BstF5I GGATG 8 cut(s) 1222, 1354, 1546, 2063, 2226, 3009, 3393, 3511
BstH2I RGCGCY 2 cut(s) 159, 2014
BstHHI GCGC 3 cut(s) 158, 2013, 3702
BstMAI GTCTC 2 cut(s) 2473, 3226
BstNI CCWGG 5 cut(s) 543, 1040, 1903, 2141, 3503
BstNSI RCATGY 7 cut(s) 22, 451, 848, 1019, 1226, 3251, 3588
BstSCI CCNGG 6 cut(s) 541, 1038, 1191, 1901, 2139, 3501
BstSFI CTRYAG 3 cut(s) 69, 2766, 3351
BstSLI GKGCMC 5 cut(s) 901, 1813, 1919, 3247, 3523
BstV2I GAAGAC 4 cut(s) 841, 996, 1240, 1977
BstX2I RGATCY 2 cut(s) 1256, 1741
BstXI CCANNNNNNTGG 3 cut(s) 347, 1451, 1873
BstYI RGATCY 2 cut(s) 1256, 1741
BsuRI GGCC 9 cut(s) 503, 573, 882, 2840, 2915, 3362, 3444, 3512, 3626
BtgI CCRYGG 2 cut(s) 1890, 1911
BtgZI GCGATG 2 cut(s) 527, 1565
BtsCI GGATG 8 cut(s) 1222, 1354, 1546, 2063, 2226, 3009, 3393, 3511
BtsI GCAGTG 2 cut(s) 2508, 2859
BtsIMutI CAGTG 6 cut(s) 157, 1855, 2370, 2508, 2859, 3719
Cac8I GCNNGC 5 cut(s) 1652, 2015, 2367, 2734, 3100
CaiI CAGNNNCTG 1 cut(s) 2882
CciI TCATGA 2 cut(s) 105, 3370
CfoI GCGC 3 cut(s) 158, 2013, 3702
Cfr10I RCCGGY 2 cut(s) 857, 3603
Cfr13I GGNCC 6 cut(s) 571, 1708, 1905, 2422, 2690, 2913
Csp6I GTAC 4 cut(s) 1821, 1854, 1878, 2087
CspCI CAANNNNNGTGG 2 cut(s) 3133, 3168
CviQI GTAC 4 cut(s) 1821, 1854, 1878, 2087
DinI GGCGCC 1 cut(s) 2012
DrdI GACNNNNNNGTC 3 cut(s) 1079, 1394, 1903
DriI GACNNNNNGTC 2 cut(s) 2410, 3532
DseDI GACNNNNNNGTC 3 cut(s) 1079, 1394, 1903
EaeI YGGCCR 1 cut(s) 3360
Eam1104I CTCTTC 2 cut(s) 2546, 2650
Eam1105I GACNNNNNGTC 2 cut(s) 2410, 3532
EarI CTCTTC 2 cut(s) 2546, 2650
Ecl136II GAGCTC 2 cut(s) 1487, 3022
Eco130I CCWWGG 6 cut(s) 504, 1890, 1911, 2682, 3255, 3752
Eco147I AGGCCT 2 cut(s) 882, 2840
Eco24I GRGCYC 3 cut(s) 9, 1489, 3024
Eco47I GGWCC 4 cut(s) 1708, 1905, 2422, 2690
Eco53kI GAGCTC 2 cut(s) 1487, 3022
Eco57I CTGAAG 7 cut(s) 621, 686, 1036, 1831, 2039, 2394, 3500
Eco88I CYCGRG 1 cut(s) 3468
EcoICRI GAGCTC 2 cut(s) 1487, 3022
EcoNI CCTNNNNNAGG 1 cut(s) 3506
EcoRI GAATTC 2 cut(s) 948, 3322
EcoRII CCWGG 5 cut(s) 541, 1038, 1901, 2139, 3501
EcoT14I CCWWGG 6 cut(s) 504, 1890, 1911, 2682, 3255, 3752
EcoT38I GRGCYC 3 cut(s) 9, 1489, 3024
EgeI GGCGCC 1 cut(s) 2012
EheI GGCGCC 1 cut(s) 2012
ErhI CCWWGG 6 cut(s) 504, 1890, 1911, 2682, 3255, 3752
FalI AAGNNNNNCTT 4 cut(s) 2037, 2069, 2878, 2910
FaqI GGGAC 8 cut(s) 79, 820, 1909, 2055, 2146, 2470, 2997, 3090
FauNDI CATATG 1 cut(s) 658
FbaI TGATCA 1 cut(s) 129
FblI GTMKAC 4 cut(s) 177, 1157, 1560, 2130
FokI GGATG 8 cut(s) 1229, 1361, 1553, 2070, 2213, 3016, 3400, 3518
FriOI GRGCYC 3 cut(s) 9, 1489, 3024
GlaI GCGC 3 cut(s) 157, 2012, 3701
GsuI CTGGAG 4 cut(s) 525, 2100, 2123, 3008
HaeII RGCGCY 2 cut(s) 159, 2014
HaeIII GGCC 9 cut(s) 503, 573, 882, 2840, 2915, 3362, 3444, 3512, 3626
HapII CCGG 7 cut(s) 609, 858, 1109, 1193, 1857, 2969, 3604
HhaI GCGC 3 cut(s) 158, 2013, 3702
Hin1I GRCGYC 1 cut(s) 2011
Hin6I GCGC 3 cut(s) 156, 2011, 3700
HinP1I GCGC 3 cut(s) 156, 2011, 3700
HincII GTYRAC 4 cut(s) 453, 1158, 1590, 2265
HindII GTYRAC 4 cut(s) 453, 1158, 1590, 2265
HindIII AAGCTT 1 cut(s) 2297
HpaII CCGG 7 cut(s) 609, 858, 1109, 1193, 1857, 2969, 3604
HphI GGTGA 8 cut(s) 95, 139, 1703, 2209, 2414, 2573, 3593, 3738
Hpy99I CGWCG 1 cut(s) 782
HpyCH4IV ACGT 2 cut(s) 777, 2306
HpySE526I ACGT 2 cut(s) 777, 2306
Hsp92I GRCGYC 1 cut(s) 2011
HspAI GCGC 3 cut(s) 156, 2011, 3700
KasI GGCGCC 1 cut(s) 2010
Kpn2I TCCGGA 1 cut(s) 2968
KpnI GGTACC 2 cut(s) 1857, 1881
Ksp22I TGATCA 1 cut(s) 129
LmnI GCTCC 9 cut(s) 12, 544, 1337, 1681, 2081, 2523, 2750, 3268, 3707
LweI GCATC 6 cut(s) 382, 504, 1531, 2048, 2836, 3085
MaeII ACGT 2 cut(s) 777, 2306
MaeIII GTNAC 6 cut(s) 709, 817, 1011, 1055, 1401, 2402
MfeI CAATTG 1 cut(s) 2597
MflI RGATCY 2 cut(s) 1256, 1741
MhlI GDGCHC 8 cut(s) 9, 901, 1489, 1813, 1919, 3024, 3247, 3523
MlsI TGGCCA 1 cut(s) 3362
MluNI TGGCCA 1 cut(s) 3362
Mly113I GGCGCC 1 cut(s) 2011
MlyI GAGTC 2 cut(s) 777, 2181
MmeI TCCRAC 5 cut(s) 199, 230, 1468, 2254, 3071
Mox20I TGGCCA 1 cut(s) 3362
MroI TCCGGA 1 cut(s) 2968
MroXI GAANNNNTTC 2 cut(s) 1144, 1287
MscI TGGCCA 1 cut(s) 3362
MslI CAYNNNNRTG 4 cut(s) 490, 1871, 2035, 3638
Msp20I TGGCCA 1 cut(s) 3362
MspCI CTTAAG 2 cut(s) 1100, 3071
MspI CCGG 7 cut(s) 609, 858, 1109, 1193, 1857, 2969, 3604
MspR9I CCNGG 6 cut(s) 543, 1040, 1193, 1903, 2141, 3503
MunI CAATTG 1 cut(s) 2597
Mva1269I GAATGC 1 cut(s) 2032
MvaI CCWGG 5 cut(s) 543, 1040, 1903, 2141, 3503
NarI GGCGCC 1 cut(s) 2011
NciI CCSGG 1 cut(s) 1193
NcoI CCATGG 2 cut(s) 1890, 1911
NdeI CATATG 1 cut(s) 658
NheI GCTAGC 1 cut(s) 2365
NlaIV GGNNCC 7 cut(s) 8, 1284, 1855, 1879, 2012, 2914, 3270
NmeAIII GCCGAG 1 cut(s) 1753
NmuCI GTSAC 2 cut(s) 1011, 2402
NspI RCATGY 7 cut(s) 22, 451, 848, 1019, 1226, 3251, 3588
NspV TTCGAA 1 cut(s) 2310
OliI CACNNNNGTG 1 cut(s) 2035
PagI TCATGA 2 cut(s) 105, 3370
PceI AGGCCT 2 cut(s) 882, 2840
PciI ACATGT 4 cut(s) 447, 1015, 3247, 3584
PctI GAATGC 1 cut(s) 2032
PdmI GAANNNNTTC 2 cut(s) 1144, 1287
PfoI TCCNGGA 3 cut(s) 1038, 2139, 3501
PleI GAGTC 2 cut(s) 776, 2180
PluTI GGCGCC 1 cut(s) 2014
PpsI GAGTC 2 cut(s) 776, 2180
PscI ACATGT 4 cut(s) 447, 1015, 3247, 3584
PshBI ATTAAT 1 cut(s) 2097
PsiI TTATAA 2 cut(s) 3380, 3402
Psp124BI GAGCTC 2 cut(s) 1489, 3024
Psp6I CCWGG 5 cut(s) 541, 1038, 1901, 2139, 3501
PspGI CCWGG 5 cut(s) 541, 1038, 1901, 2139, 3501
PspN4I GGNNCC 7 cut(s) 8, 1284, 1855, 1879, 2012, 2914, 3270
PspPI GGNCC 6 cut(s) 571, 1708, 1905, 2422, 2690, 2913
PsrI GAACNNNNNNTAC 2 cut(s) 2370, 2402
PstI CTGCAG 1 cut(s) 3355
PstNI CAGNNNCTG 1 cut(s) 2882
PsuI RGATCY 2 cut(s) 1256, 1741
RsaI GTAC 4 cut(s) 1822, 1855, 1879, 2088
RsaNI GTAC 4 cut(s) 1821, 1854, 1878, 2087
RseI CAYNNNNRTG 4 cut(s) 490, 1871, 2035, 3638
SacI GAGCTC 2 cut(s) 1489, 3024
SalI GTCGAC 1 cut(s) 1156
Sau96I GGNCC 6 cut(s) 571, 1708, 1905, 2422, 2690, 2913
ScaI AGTACT 1 cut(s) 1822
SchI GAGTC 2 cut(s) 777, 2181
ScrFI CCNGG 6 cut(s) 543, 1040, 1193, 1903, 2141, 3503
SduI GDGCHC 8 cut(s) 9, 901, 1489, 1813, 1919, 3024, 3247, 3523
SfaNI GCATC 6 cut(s) 382, 504, 1531, 2048, 2836, 3085
SfcI CTRYAG 3 cut(s) 69, 2766, 3351
SfoI GGCGCC 1 cut(s) 2012
SfuI TTCGAA 1 cut(s) 2310
SinI GGWCC 4 cut(s) 1708, 1905, 2422, 2690
SmiMI CAYNNNNRTG 4 cut(s) 490, 1871, 2035, 3638
SmlI CTYRAG 4 cut(s) 1100, 1422, 3071, 3229
SmoI CTYRAG 4 cut(s) 1100, 1422, 3071, 3229
SpeI ACTAGT 3 cut(s) 1529, 2512, 3115
SseBI AGGCCT 2 cut(s) 882, 2840
SsiI CCGC 3 cut(s) 261, 2930, 3662
SspDI GGCGCC 1 cut(s) 2010
SstI GAGCTC 2 cut(s) 1489, 3024
StuI AGGCCT 2 cut(s) 882, 2840
StyD4I CCNGG 6 cut(s) 541, 1038, 1191, 1901, 2139, 3501
StyI CCWWGG 6 cut(s) 504, 1890, 1911, 2682, 3255, 3752
TaiI ACGT 2 cut(s) 780, 2309
TaqI TCGA 6 cut(s) 278, 1157, 1176, 2310, 2389, 3018
TatI WGTACW 2 cut(s) 1820, 2086
TscAI CASTG 6 cut(s) 157, 1855, 2377, 2508, 2866, 3726
TseFI GTSAC 2 cut(s) 1011, 2402
Tsp45I GTSAC 2 cut(s) 1011, 2402
TspGWI ACGGA 2 cut(s) 3284, 3720
TspRI CASTG 6 cut(s) 157, 1855, 2377, 2508, 2866, 3726
Vha464I CTTAAG 2 cut(s) 1100, 3071
VneI GTGCAC 2 cut(s) 897, 3519
VpaK11BI GGWCC 4 cut(s) 1708, 1905, 2422, 2690
VspI ATTAAT 1 cut(s) 2097
XagI CCTNNNNNAGG 1 cut(s) 3506
XapI RAATTY 4 cut(s) 907, 948, 3322, 3374
XceI RCATGY 7 cut(s) 22, 451, 848, 1019, 1226, 3251, 3588
XcmI CCANNNNNNNNNTGG 2 cut(s) 1451, 1909
XmiI GTMKAC 4 cut(s) 177, 1157, 1560, 2130
XmnI GAANNNNTTC 2 cut(s) 1144, 1287
ZrmI AGTACT 1 cut(s) 1822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.