Multidrug resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SMC_N | PF02463 | 14 - 718 | 2.2e-08 | RecF/RecN/SMC N terminal domain |
| ABC_membrane | PF00664 | 185 - 443 | 2e-42 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 526 - 675 | 2.7e-32 | ABC transporter |
| ABC_membrane | PF00664 | 844 - 1108 | 6.2e-44 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1178 - 1326 | 4.4e-33 | ABC transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 128, 3839 |
| AarI | CACCTGC | 1 cut(s) | 227 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2192 |
| Acc36I | ACCTGC | 2 cut(s) | 227, 1906 |
| AccB1I | GGYRCC | 2 cut(s) | 1085, 4166 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3644 |
| AccI | GTMKAC | 1 cut(s) | 672 |
| AccII | CGCG | 2 cut(s) | 621, 1461 |
| AciI | CCGC | 5 cut(s) | 619, 1135, 2110, 3188, 4097 |
| AclWI | GGATC | 9 cut(s) | 1676, 2172, 2185, 2608, 2847, 3629, 3642, 3655, 4138 |
| AcoI | YGGCCR | 3 cut(s) | 264, 1377, 3901 |
| AcsI | RAATTY | 3 cut(s) | 841, 1698, 1998 |
| AcuI | CTGAAG | 7 cut(s) | 398, 1193, 1500, 2534, 2856, 2881, 3816 |
| AcvI | CACGTG | 1 cut(s) | 190 |
| AfaI | GTAC | 3 cut(s) | 680, 1426, 2055 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 335, 1039, 1040, 1691, 1758, 3644, 3961 |
| AflII | CTTAAG | 1 cut(s) | 1592 |
| AflIII | ACRYGT | 2 cut(s) | 189, 4043 |
| AhlI | ACTAGT | 1 cut(s) | 3574 |
| AjnI | CCWGG | 1 cut(s) | 930 |
| AleI | CACNNNNGTG | 2 cut(s) | 2497, 2518 |
| Alw21I | GWGCWC | 4 cut(s) | 189, 221, 615, 3326 |
| Alw26I | GTCTC | 4 cut(s) | 105, 112, 757, 1983 |
| AlwI | GGATC | 9 cut(s) | 1676, 2172, 2185, 2608, 2847, 3629, 3642, 3655, 4138 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 242, 3794 |
| Ama87I | CYCGRG | 2 cut(s) | 3154, 3927 |
| AoxI | GGCC | 8 cut(s) | 264, 364, 407, 1333, 1377, 3151, 3512, 3901 |
| ApoI | RAATTY | 3 cut(s) | 841, 1698, 1998 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 244, 276, 3591, 3623 |
| AseI | ATTAAT | 1 cut(s) | 2927 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1178, 1779, 2736, 2760 |
| AspS9I | GGNCC | 3 cut(s) | 747, 1749, 3152 |
| AsuC2I | CCSGG | 2 cut(s) | 1035, 2824 |
| AsuHPI | GGTGA | 6 cut(s) | 929, 1334, 2099, 2356, 3382, 4111 |
| AsuII | TTCGAA | 1 cut(s) | 2740 |
| AsuNHI | GCTAGC | 1 cut(s) | 286 |
| AvaI | CYCGRG | 2 cut(s) | 3154, 3927 |
| AvaII | GGWCC | 2 cut(s) | 747, 1749 |
| AxyI | CCTNAGG | 1 cut(s) | 806 |
| BaeGI | GKGCMC | 2 cut(s) | 2824, 3982 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2127, 2160, 3934, 3967 |
| BalI | TGGCCA | 3 cut(s) | 266, 1379, 3903 |
| BamHI | GGATCC | 2 cut(s) | 2177, 3647 |
| BanI | GGYRCC | 2 cut(s) | 1085, 4166 |
| BbrPI | CACGTG | 1 cut(s) | 190 |
| Bbv12I | GWGCWC | 4 cut(s) | 189, 221, 615, 3326 |
| BbvCI | CCTCAGC | 1 cut(s) | 2114 |
| BciT130I | CCWGG | 1 cut(s) | 932 |
| BciVI | GTATCC | 1 cut(s) | 3962 |
| BclI | TGATCA | 1 cut(s) | 2788 |
| BcnI | CCSGG | 2 cut(s) | 1035, 2824 |
| BcoDI | GTCTC | 4 cut(s) | 105, 112, 757, 1983 |
| BcuI | ACTAGT | 1 cut(s) | 3574 |
| BfaI | CTAG | 8 cut(s) | 287, 305, 2525, 2753, 2997, 3410, 3575, 4004 |
| BfmI | CTRYAG | 4 cut(s) | 1899, 2862, 3048, 3231 |
| BfrI | CTTAAG | 1 cut(s) | 1592 |
| BfuAI | ACCTGC | 2 cut(s) | 227, 1906 |
| BfuI | GTATCC | 1 cut(s) | 3962 |
| BlpI | GCTNAGC | 2 cut(s) | 614, 2659 |
| BmcAI | AGTACT | 2 cut(s) | 680, 1426 |
| Bme1390I | CCNGG | 3 cut(s) | 932, 1035, 2824 |
| Bme18I | GGWCC | 2 cut(s) | 747, 1749 |
| BmeT110I | CYCGRG | 2 cut(s) | 3154, 3927 |
| BmgT120I | GGNCC | 3 cut(s) | 747, 1749, 3152 |
| BmiI | GGNNCC | 5 cut(s) | 1087, 1751, 2179, 3649, 4168 |
| BmrFI | CCNGG | 3 cut(s) | 932, 1035, 2824 |
| BmrI | ACTGGG | 3 cut(s) | 2404, 2525, 3500 |
| BmsI | GCATC | 6 cut(s) | 874, 1602, 2023, 2084, 3130, 3334 |
| BmtI | GCTAGC | 1 cut(s) | 290 |
| BmuI | ACTGGG | 3 cut(s) | 2404, 2525, 3500 |
| BpmI | CTGGAG | 5 cut(s) | 1122, 1965, 2238, 2675, 4040 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1860, 2114, 2572 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 614, 2659 |
| Bpu14I | TTCGAA | 1 cut(s) | 2740 |
| BpuEI | CTTGAG | 5 cut(s) | 671, 1214, 1899, 3530, 3718 |
| BpuMI | CCSGG | 2 cut(s) | 1035, 2824 |
| BsaAI | YACGTR | 2 cut(s) | 190, 2126 |
| BsaI | GGTCTC | 1 cut(s) | 1983 |
| BsaJI | CCNNGG | 3 cut(s) | 1033, 3155, 3846 |
| BsaWI | WCCGGW | 1 cut(s) | 1465 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 335, 1039, 1040, 1691, 1758, 3644, 3961 |
| Bse21I | CCTNAGG | 1 cut(s) | 806 |
| Bse3DI | GCAATG | 3 cut(s) | 231, 1185, 3336 |
| BseBI | CCWGG | 1 cut(s) | 932 |
| BseDI | CCNNGG | 3 cut(s) | 1033, 3155, 3846 |
| BseGI | GGATG | 8 cut(s) | 770, 1029, 1793, 2038, 2397, 3312, 3671, 3970 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 335, 1039, 1040, 1691, 1758, 3644, 3961 |
| BseMI | GCAATG | 3 cut(s) | 231, 1185, 3336 |
| BseRI | GAGGAG | 3 cut(s) | 2678, 3452, 3897 |
| BseSI | GKGCMC | 2 cut(s) | 2824, 3982 |
| BseYI | CCCAGC | 3 cut(s) | 400, 1615, 2350 |
| BsgI | GTGCAG | 2 cut(s) | 1721, 1875 |
| Bsh1236I | CGCG | 2 cut(s) | 621, 1461 |
| BshFI | GGCC | 8 cut(s) | 266, 366, 409, 1335, 1379, 3153, 3514, 3903 |
| BshNI | GGYRCC | 2 cut(s) | 1085, 4166 |
| BsiHKAI | GWGCWC | 4 cut(s) | 189, 221, 615, 3326 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3154, 3927 |
| BsiSI | CCGG | 3 cut(s) | 1035, 1466, 2824 |
| BslFI | GGGAC | 3 cut(s) | 489, 1735, 3594 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 335, 1039, 1040, 1691, 1758, 3644, 3961 |
| BsmAI | GTCTC | 4 cut(s) | 105, 112, 757, 1983 |
| BsmBI | CGTCTC | 1 cut(s) | 105 |
| BsmFI | GGGAC | 3 cut(s) | 489, 1735, 3594 |
| BsmI | GAATGC | 2 cut(s) | 1393, 2494 |
| BsnI | GGCC | 8 cut(s) | 266, 366, 409, 1335, 1379, 3153, 3514, 3903 |
| Bso31I | GGTCTC | 1 cut(s) | 1983 |
| BsoBI | CYCGRG | 2 cut(s) | 3154, 3927 |
| Bsp119I | TTCGAA | 1 cut(s) | 2740 |
| Bsp1286I | GDGCHC | 6 cut(s) | 189, 221, 615, 2824, 3326, 3982 |
| Bsp1407I | TGTACA | 1 cut(s) | 2053 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 614, 2659 |
| Bsp19I | CCATGG | 1 cut(s) | 3846 |
| BspACI | CCGC | 5 cut(s) | 619, 1135, 2110, 3188, 4097 |
| BspANI | GGCC | 8 cut(s) | 266, 366, 409, 1335, 1379, 3153, 3514, 3903 |
| BspFNI | CGCG | 2 cut(s) | 621, 1461 |
| BspHI | TCATGA | 2 cut(s) | 2955, 3829 |
| BspLI | GGNNCC | 5 cut(s) | 1087, 1751, 2179, 3649, 4168 |
| BspMAI | CTGCAG | 2 cut(s) | 1903, 2866 |
| BspMI | ACCTGC | 2 cut(s) | 227, 1906 |
| BspOI | GCTAGC | 1 cut(s) | 290 |
| BspPI | GGATC | 9 cut(s) | 1676, 2172, 2185, 2608, 2847, 3629, 3642, 3655, 4138 |
| BspQI | GCTCTTC | 1 cut(s) | 1011 |
| BspT104I | TTCGAA | 1 cut(s) | 2740 |
| BspT107I | GGYRCC | 2 cut(s) | 1085, 4166 |
| BspTI | CTTAAG | 1 cut(s) | 1592 |
| BspTNI | GGTCTC | 1 cut(s) | 1983 |
| BsrDI | GCAATG | 3 cut(s) | 231, 1185, 3336 |
| BsrGI | TGTACA | 1 cut(s) | 2053 |
| BssECI | CCNNGG | 3 cut(s) | 1033, 3155, 3846 |
| BssT1I | CCWWGG | 1 cut(s) | 3846 |
| Bst2UI | CCWGG | 1 cut(s) | 932 |
| Bst4CI | ACNGT | 9 cut(s) | 480, 833, 1141, 2581, 2870, 3177, 3226, 3607, 3790 |
| Bst6I | CTCTTC | 5 cut(s) | 883, 1011, 1132, 2553, 3008 |
| BstAFI | CTTAAG | 1 cut(s) | 1592 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1001, 1427, 2024, 3977 |
| BstAUI | TGTACA | 1 cut(s) | 2053 |
| BstBAI | YACGTR | 2 cut(s) | 190, 2126 |
| BstBI | TTCGAA | 1 cut(s) | 2740 |
| BstC8I | GCNNGC | 4 cut(s) | 288, 2330, 2508, 2536 |
| BstDSI | CCRYGG | 1 cut(s) | 3846 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 333 |
| BstF5I | GGATG | 8 cut(s) | 770, 1029, 1793, 2038, 2397, 3312, 3671, 3970 |
| BstFNI | CGCG | 2 cut(s) | 621, 1461 |
| BstMAI | GTCTC | 4 cut(s) | 105, 112, 757, 1983 |
| BstNI | CCWGG | 1 cut(s) | 932 |
| BstNSI | RCATGY | 1 cut(s) | 4047 |
| BstSCI | CCNGG | 3 cut(s) | 930, 1033, 2822 |
| BstSFI | CTRYAG | 4 cut(s) | 1899, 2862, 3048, 3231 |
| BstSLI | GKGCMC | 2 cut(s) | 2824, 3982 |
| BstSNI | TACGTA | 1 cut(s) | 2126 |
| BstUI | CGCG | 2 cut(s) | 621, 1461 |
| BstX2I | RGATCY | 3 cut(s) | 2177, 2852, 3647 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 141, 262, 2281 |
| BstYI | RGATCY | 3 cut(s) | 2177, 2852, 3647 |
| Bsu36I | CCTNAGG | 1 cut(s) | 806 |
| BsuI | GTATCC | 1 cut(s) | 3962 |
| BsuRI | GGCC | 8 cut(s) | 266, 366, 409, 1335, 1379, 3153, 3514, 3903 |
| BtgI | CCRYGG | 1 cut(s) | 3846 |
| BtgZI | GCGATG | 1 cut(s) | 2061 |
| BtsCI | GGATG | 8 cut(s) | 770, 1029, 1793, 2038, 2397, 3312, 3671, 3970 |
| BtsI | GCAGTG | 3 cut(s) | 297, 1639, 3096 |
| BveI | ACCTGC | 2 cut(s) | 227, 1906 |
| Cac8I | GCNNGC | 4 cut(s) | 288, 2330, 2508, 2536 |
| CaiI | CAGNNNCTG | 2 cut(s) | 242, 3794 |
| CciI | TCATGA | 2 cut(s) | 2955, 3829 |
| Cfr13I | GGNCC | 3 cut(s) | 747, 1749, 3152 |
| CseI | GACGC | 2 cut(s) | 610, 1151 |
| Csp6I | GTAC | 3 cut(s) | 679, 1425, 2054 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3592, 3627 |
| CviQI | GTAC | 3 cut(s) | 679, 1425, 2054 |
| DraI | TTTAAA | 1 cut(s) | 3532 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2192 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2192 |
| EaeI | YGGCCR | 3 cut(s) | 264, 1377, 3901 |
| Eam1104I | CTCTTC | 5 cut(s) | 883, 1011, 1132, 2553, 3008 |
| EarI | CTCTTC | 5 cut(s) | 883, 1011, 1132, 2553, 3008 |
| Eco105I | TACGTA | 1 cut(s) | 2126 |
| Eco130I | CCWWGG | 1 cut(s) | 3846 |
| Eco147I | AGGCCT | 1 cut(s) | 3514 |
| Eco31I | GGTCTC | 1 cut(s) | 1983 |
| Eco32I | GATATC | 1 cut(s) | 1907 |
| Eco47I | GGWCC | 2 cut(s) | 747, 1749 |
| Eco57I | CTGAAG | 7 cut(s) | 398, 1193, 1500, 2534, 2856, 2881, 3816 |
| Eco72I | CACGTG | 1 cut(s) | 190 |
| Eco81I | CCTNAGG | 1 cut(s) | 806 |
| Eco88I | CYCGRG | 2 cut(s) | 3154, 3927 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 333 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1749 |
| EcoRII | CCWGG | 1 cut(s) | 930 |
| EcoRV | GATATC | 1 cut(s) | 1907 |
| EcoT14I | CCWWGG | 1 cut(s) | 3846 |
| ErhI | CCWWGG | 1 cut(s) | 3846 |
| Esp3I | CGTCTC | 1 cut(s) | 105 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1526, 1558, 3343, 3375 |
| FaqI | GGGAC | 3 cut(s) | 489, 1735, 3594 |
| FauI | CCCGC | 1 cut(s) | 3181 |
| FauNDI | CATATG | 3 cut(s) | 1507, 2356, 2816 |
| FbaI | TGATCA | 1 cut(s) | 2788 |
| FblI | GTMKAC | 1 cut(s) | 672 |
| FokI | GGATG | 8 cut(s) | 757, 1016, 1780, 2045, 2384, 3299, 3678, 3977 |
| FspBI | CTAG | 8 cut(s) | 287, 305, 2525, 2753, 2997, 3410, 3575, 4004 |
| GsaI | CCCAGC | 3 cut(s) | 404, 1619, 2354 |
| GsuI | CTGGAG | 5 cut(s) | 1122, 1965, 2238, 2675, 4040 |
| HaeIII | GGCC | 8 cut(s) | 266, 366, 409, 1335, 1379, 3153, 3514, 3903 |
| HapII | CCGG | 3 cut(s) | 1035, 1466, 2824 |
| HgaI | GACGC | 2 cut(s) | 610, 1151 |
| HincII | GTYRAC | 7 cut(s) | 50, 538, 673, 1540, 1650, 2197, 3059 |
| HindII | GTYRAC | 7 cut(s) | 50, 538, 673, 1540, 1650, 2197, 3059 |
| HindIII | AAGCTT | 1 cut(s) | 2986 |
| HpaII | CCGG | 3 cut(s) | 1035, 1466, 2824 |
| HphI | GGTGA | 6 cut(s) | 929, 1334, 2099, 2356, 3382, 4111 |
| Hpy166II | GTNNAC | 8 cut(s) | 50, 538, 673, 1540, 1650, 2197, 3059, 4071 |
| Hpy8I | GTNNAC | 8 cut(s) | 50, 538, 673, 1540, 1650, 2197, 3059, 4071 |
| Hpy99I | CGWCG | 1 cut(s) | 677 |
| HpyCH4III | ACNGT | 9 cut(s) | 480, 833, 1141, 2581, 2870, 3177, 3226, 3607, 3790 |
| HpyCH4IV | ACGT | 3 cut(s) | 189, 816, 2125 |
| HpySE526I | ACGT | 3 cut(s) | 189, 816, 2125 |
| Ksp22I | TGATCA | 1 cut(s) | 2788 |
| LguI | GCTCTTC | 1 cut(s) | 1011 |
| LmnI | GCTCC | 8 cut(s) | 638, 1159, 1251, 1829, 2219, 2284, 3439, 3848 |
| LweI | GCATC | 6 cut(s) | 874, 1602, 2023, 2084, 3130, 3334 |
| MaeI | CTAG | 8 cut(s) | 287, 305, 2525, 2753, 2997, 3410, 3575, 4004 |
| MaeII | ACGT | 3 cut(s) | 189, 816, 2125 |
| MaeIII | GTNAC | 9 cut(s) | 543, 1201, 1846, 2267, 2362, 2932, 3470, 3668, 3702 |
| MfeI | CAATTG | 3 cut(s) | 705, 1937, 4152 |
| MflI | RGATCY | 3 cut(s) | 2177, 2852, 3647 |
| MhlI | GDGCHC | 6 cut(s) | 189, 221, 615, 2824, 3326, 3982 |
| MlsI | TGGCCA | 3 cut(s) | 266, 1379, 3903 |
| MluNI | TGGCCA | 3 cut(s) | 266, 1379, 3903 |
| MlyI | GAGTC | 4 cut(s) | 114, 1469, 1578, 4082 |
| MmeI | TCCRAC | 5 cut(s) | 158, 694, 725, 1276, 1606 |
| Mox20I | TGGCCA | 3 cut(s) | 266, 1379, 3903 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1178, 1779, 2736, 2760 |
| MscI | TGGCCA | 3 cut(s) | 266, 1379, 3903 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1259, 2467, 2497, 2518, 2954, 3317, 4097 |
| Msp20I | TGGCCA | 3 cut(s) | 266, 1379, 3903 |
| MspA1I | CMGCKG | 1 cut(s) | 1735 |
| MspCI | CTTAAG | 1 cut(s) | 1592 |
| MspI | CCGG | 3 cut(s) | 1035, 1466, 2824 |
| MspR9I | CCNGG | 3 cut(s) | 932, 1035, 2824 |
| MunI | CAATTG | 3 cut(s) | 705, 1937, 4152 |
| Mva1269I | GAATGC | 2 cut(s) | 1393, 2494 |
| MvaI | CCWGG | 1 cut(s) | 932 |
| MvnI | CGCG | 2 cut(s) | 621, 1461 |
| NciI | CCSGG | 2 cut(s) | 1035, 2824 |
| NcoI | CCATGG | 1 cut(s) | 3846 |
| NdeI | CATATG | 3 cut(s) | 1507, 2356, 2816 |
| NheI | GCTAGC | 1 cut(s) | 286 |
| NlaIV | GGNNCC | 5 cut(s) | 1087, 1751, 2179, 3649, 4168 |
| NmuCI | GTSAC | 5 cut(s) | 1846, 2362, 2932, 3668, 3702 |
| NspI | RCATGY | 1 cut(s) | 4047 |
| NspV | TTCGAA | 1 cut(s) | 2740 |
| OliI | CACNNNNGTG | 2 cut(s) | 2497, 2518 |
| PagI | TCATGA | 2 cut(s) | 2955, 3829 |
| PaqCI | CACCTGC | 1 cut(s) | 227 |
| PceI | AGGCCT | 1 cut(s) | 3514 |
| PciI | ACATGT | 1 cut(s) | 4043 |
| PciSI | GCTCTTC | 1 cut(s) | 1011 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 669 |
| PctI | GAATGC | 2 cut(s) | 1393, 2494 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1178, 1779, 2736, 2760 |
| PflFI | GACNNNGTC | 1 cut(s) | 668 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3644 |
| PleI | GAGTC | 4 cut(s) | 114, 1469, 1578, 4082 |
| PmaCI | CACGTG | 1 cut(s) | 190 |
| PmlI | CACGTG | 1 cut(s) | 190 |
| PpsI | GAGTC | 4 cut(s) | 114, 1469, 1578, 4082 |
| Ppu21I | YACGTR | 2 cut(s) | 190, 2126 |
| PpuMI | RGGWCCY | 1 cut(s) | 1749 |
| PscI | ACATGT | 1 cut(s) | 4043 |
| PshBI | ATTAAT | 1 cut(s) | 2927 |
| PsiI | TTATAA | 2 cut(s) | 128, 3839 |
| Psp5II | RGGWCCY | 1 cut(s) | 1749 |
| Psp6I | CCWGG | 1 cut(s) | 930 |
| PspCI | CACGTG | 1 cut(s) | 190 |
| PspFI | CCCAGC | 3 cut(s) | 400, 1615, 2350 |
| PspGI | CCWGG | 1 cut(s) | 930 |
| PspN4I | GGNNCC | 5 cut(s) | 1087, 1751, 2179, 3649, 4168 |
| PspPI | GGNCC | 3 cut(s) | 747, 1749, 3152 |
| PspPPI | RGGWCCY | 1 cut(s) | 1749 |
| PstI | CTGCAG | 2 cut(s) | 1903, 2866 |
| PstNI | CAGNNNCTG | 2 cut(s) | 242, 3794 |
| PsuI | RGATCY | 3 cut(s) | 2177, 2852, 3647 |
| PsyI | GACNNNGTC | 1 cut(s) | 668 |
| PvuII | CAGCTG | 1 cut(s) | 1735 |
| RsaI | GTAC | 3 cut(s) | 680, 1426, 2055 |
| RsaNI | GTAC | 3 cut(s) | 679, 1425, 2054 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1259, 2467, 2497, 2518, 2954, 3317, 4097 |
| SalI | GTCGAC | 1 cut(s) | 671 |
| SapI | GCTCTTC | 1 cut(s) | 1011 |
| Sau96I | GGNCC | 3 cut(s) | 747, 1749, 3152 |
| SbfI | CCTGCAGG | 1 cut(s) | 1903 |
| ScaI | AGTACT | 2 cut(s) | 680, 1426 |
| SchI | GAGTC | 4 cut(s) | 114, 1469, 1578, 4082 |
| ScrFI | CCNGG | 3 cut(s) | 932, 1035, 2824 |
| SdaI | CCTGCAGG | 1 cut(s) | 1903 |
| SduI | GDGCHC | 6 cut(s) | 189, 221, 615, 2824, 3326, 3982 |
| SfaNI | GCATC | 6 cut(s) | 874, 1602, 2023, 2084, 3130, 3334 |
| SfcI | CTRYAG | 4 cut(s) | 1899, 2862, 3048, 3231 |
| SfuI | TTCGAA | 1 cut(s) | 2740 |
| SinI | GGWCC | 2 cut(s) | 747, 1749 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1259, 2467, 2497, 2518, 2954, 3317, 4097 |
| SmlI | CTYRAG | 6 cut(s) | 686, 1193, 1592, 1914, 3545, 3697 |
| SmoI | CTYRAG | 6 cut(s) | 686, 1193, 1592, 1914, 3545, 3697 |
| SnaBI | TACGTA | 1 cut(s) | 2126 |
| SpeI | ACTAGT | 1 cut(s) | 3574 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1903 |
| SseBI | AGGCCT | 1 cut(s) | 3514 |
| SsiI | CCGC | 5 cut(s) | 619, 1135, 2110, 3188, 4097 |
| SspI | AATATT | 3 cut(s) | 1810, 2373, 3399 |
| SspMI | CTAG | 8 cut(s) | 287, 305, 2525, 2753, 2997, 3410, 3575, 4004 |
| StuI | AGGCCT | 1 cut(s) | 3514 |
| StyD4I | CCNGG | 3 cut(s) | 930, 1033, 2822 |
| StyI | CCWWGG | 1 cut(s) | 3846 |
| TaaI | ACNGT | 9 cut(s) | 480, 833, 1141, 2581, 2870, 3177, 3226, 3607, 3790 |
| TaiI | ACGT | 3 cut(s) | 192, 819, 2128 |
| TaqI | TCGA | 4 cut(s) | 672, 2740, 3023, 3136 |
| TaqII | GACCGA | 1 cut(s) | 1006 |
| TatI | WGTACW | 3 cut(s) | 678, 1424, 2053 |
| TauI | GCSGC | 1 cut(s) | 621 |
| TseFI | GTSAC | 5 cut(s) | 1846, 2362, 2932, 3668, 3702 |
| Tsp45I | GTSAC | 5 cut(s) | 1846, 2362, 2932, 3668, 3702 |
| TspGWI | ACGGA | 1 cut(s) | 3640 |
| Tth111I | GACNNNGTC | 1 cut(s) | 668 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3644 |
| Vha464I | CTTAAG | 1 cut(s) | 1592 |
| VpaK11BI | GGWCC | 2 cut(s) | 747, 1749 |
| VspI | ATTAAT | 1 cut(s) | 2927 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 333 |
| XapI | RAATTY | 3 cut(s) | 841, 1698, 1998 |
| XbaI | TCTAGA | 1 cut(s) | 3409 |
| XceI | RCATGY | 1 cut(s) | 4047 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 781 |
| XmiI | GTMKAC | 1 cut(s) | 672 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1178, 1779, 2736, 2760 |
| XspI | CTAG | 8 cut(s) | 287, 305, 2525, 2753, 2997, 3410, 3575, 4004 |
| ZrmI | AGTACT | 2 cut(s) | 680, 1426 |