RchiOBHm_Chr2g0169781

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000317
Physical Location & Seq
Forward (+)
83915504 .. 83918699
3196 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ53735

Sequence Viewer

Length: 1560 bp
ATGAGGAGTAAATATATGCAAGCAGTGTTGCACTGTGACGTGGGTTACTTTGATTTGCATGTAACAAGCACCTCTGAGGTTCTAACGAGCATCTCAAATGATATTCAGTTTAACAGGATTAGCAAGAAAGAGAAGAGAAGAATGCATCAAGGCTGGAATGCTGGATCAATAGCAGAGCAGGCAATATCATCCAGTAGATCAGTTTATGCATTTACTGGAGAGAACAACACTATATACCAATTCTCTGAAGCTCTACGAGGGACCATAAAGCTGGGGTTGAAGCAGGGCATGATTAAAGGTTTGGCCATTGGTAGCAGTACTGGCACAGCACTTGCCAATTGGGCTGCATGTCTTATTATGGGAAATGGGTGCTGCTTTATCGAATATTCGAATTTGAAGTACATTGCAGAAGCATGTTCAGCTGGGGATCATATCCTGGAGATTATTAATCGAGTTCCAGAGATTGATTTAGACAACATGGAAGGCGCAATTTTGGAGCATGTTACAAGCAAACGCTTGAAGAAGAAGTCAGGTCAAGGGACTACCCCAACGACTGCACCCCGCGGTGCTGGCACGCCTGTGCAATCACACGTTCAAAAGAGACTGTTTGCACACCAGCTGGTTTTGGAGCCAAACAACCCCTCAAGACCTGAGAACATCATCCTGAACAGATTCTGTCTAACTGTACGAGCAGGAAAAACTGTTGTGTTGGTGGGCTCAAGCGGATCAGGAAAATCCATAGTGATATCCCTCTTGCAAAGATTCTATGATCCACTTGAGGGAGAGATTCTCCTAAATGGAGTTGCTATTGATAAACTGCAGCTTAAGTGGCTAAGGTCACAAATTAATGTTATCCGTAAGCCAAGAGCCTTCATTGTTCTCACCACCATTAAAGATAACACACTTCTAGGCGAGGAGGATGGTACAAGAGAGGAAATAGTAGAGGCAGCCAAAGCCAGCAACGCTCATGATTTTATATGTCAGTTGCCTCAAGGATATGATACCCAGAGAATAGCTATTGCAAGAGCACTAATAAAGAAACCTCATATTCTTCTCCTTGATGAAGCCACAAGTGCAGTAGACTCAGAGTCGGAAAGGCTTGTTCAAGAAGCCCTCCACAGGGCTGCCATGGGCAGAACTACCATTGTCATTGCACACCGCTTGTCCACAATTCGAAATGCTGATCTTATTGGTGTCATGCAAAATGGTTGTGTCATAGAAACCGGCTCACACGATGAACTGATTCAACACCAAAATGGACTGTACACTTCTTTTGTTCGTCTCCAACAAACAGAAACAGAAACCCCAGAAGATCAATTTCAATGTACTGGTACTTGTACTACTACTCTTCCAGTAATAGCGAGTCCGTTAAACTTGACCTCCCAGCTTGGTGGATCTGATAGTACTACTGCAAAAGAATATCCAAACAACATGGTCACACGAAAATCGTCAATTTGGAGATTGTTATCTATAACTTCTCCAAAGTGGAAACAAGCAATTTTGGGGCGTTTGAGTGCAATGTTGAAGGATATCGACATAATGTGTGCCTCTACAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

519

Amino Acids

57.05

Weight (kDa)

8.66

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 223 - 358 2.3e-23 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1080
AccII CGCG 1 cut(s) 564
AciI CCGC 4 cut(s) 562, 564, 723, 1159
AclWI GGATC 5 cut(s) 172, 435, 733, 764, 1402
AcoI YGGCCR 1 cut(s) 303
AcsI RAATTY 1 cut(s) 391
AcuI CTGAAG 1 cut(s) 267
AfaI GTAC 9 cut(s) 319, 401, 687, 925, 1265, 1327, 1333, 1339, 1405
AfiI CCNNNNNNNGG 3 cut(s) 779, 1119, 1120
AflII CTTAAG 1 cut(s) 824
AflIII ACRYGT 1 cut(s) 589
AgsI TTSAA 8 cut(s) 280, 397, 520, 596, 1106, 1247, 1322, 1525
AhdI GACNNNNNGTC 1 cut(s) 1087
AjiI CACGTC 1 cut(s) 40
AjnI CCWGG 1 cut(s) 435
AleI CACNNNNGTG 1 cut(s) 578
AluBI AGCT 7 cut(s) 251, 271, 422, 619, 823, 1016, 1387
AluI AGCT 7 cut(s) 251, 271, 422, 619, 823, 1016, 1387
Alw21I GWGCWC 1 cut(s) 1030
Alw26I GTCTC 2 cut(s) 595, 1286
AlwI GGATC 5 cut(s) 172, 435, 733, 764, 1402
AlwNI CAGNNNCTG 1 cut(s) 675
AoxI GGCC 1 cut(s) 303
ApeKI GCWGC 5 cut(s) 344, 372, 820, 947, 1124
ApoI RAATTY 1 cut(s) 391
AseI ATTAAT 2 cut(s) 447, 846
Asp700I GAANNNNTTC 2 cut(s) 671, 1242
AspLEI GCGC 1 cut(s) 488
AspS9I GGNCC 1 cut(s) 261
AsuHPI GGTGA 1 cut(s) 874
AsuII TTCGAA 2 cut(s) 389, 1174
AvaII GGWCC 1 cut(s) 261
BalI TGGCCA 1 cut(s) 305
BanII GRGCYC 1 cut(s) 719
Bbv12I GWGCWC 1 cut(s) 1030
BbvI GCAGC 5 cut(s) 331, 359, 832, 959, 1111
BccI CCATC 1 cut(s) 914
BciT130I CCWGG 1 cut(s) 437
BcoDI GTCTC 2 cut(s) 595, 1286
BfaI CTAG 2 cut(s) 908, 1558
BfmI CTRYAG 1 cut(s) 818
BfrI CTTAAG 1 cut(s) 824
BglI GCCNNNNNGGC 1 cut(s) 341
BisI GCNGC 5 cut(s) 345, 373, 821, 948, 1125
BlsI GCNGC 5 cut(s) 346, 374, 822, 949, 1126
BmcAI AGTACT 2 cut(s) 319, 1405
Bme1390I CCNGG 1 cut(s) 437
Bme18I GGWCC 1 cut(s) 261
BmeRI GACNNNNNGTC 1 cut(s) 1087
BmgBI CACGTC 1 cut(s) 40
BmgT120I GGNCC 1 cut(s) 261
BmiI GGNNCC 2 cut(s) 262, 630
BmrFI CCNGG 1 cut(s) 437
BmsI GCATC 2 cut(s) 99, 154
BplI GAGNNNNNCTC 2 cut(s) 774, 806
BpmI CTGGAG 2 cut(s) 237, 458
Bpu10I CCTNAGC 1 cut(s) 833
Bpu14I TTCGAA 2 cut(s) 389, 1174
BpuEI CTTGAG 4 cut(s) 628, 703, 797, 975
BsaBI GATNNNNATC 1 cut(s) 1465
BsaJI CCNNGG 2 cut(s) 562, 1128
BsaXI ACNNNNNCTCC 2 cut(s) 1364, 1394
Bsc4I CCNNNNNNNGG 3 cut(s) 779, 1119, 1120
Bse118I RCCGGY 1 cut(s) 1223
Bse1I ACTGG 5 cut(s) 192, 220, 325, 1333, 1352
Bse3DI GCAATG 3 cut(s) 402, 1149, 1524
Bse8I GATNNNNATC 1 cut(s) 1465
BseBI CCWGG 1 cut(s) 437
BseDI CCNNGG 2 cut(s) 562, 1128
BseGI GGATG 3 cut(s) 188, 660, 925
BseJI GATNNNNATC 1 cut(s) 1465
BseLI CCNNNNNNNGG 3 cut(s) 779, 1119, 1120
BseMI GCAATG 3 cut(s) 402, 1149, 1524
BseMII CTCAG 3 cut(s) 66, 642, 1098
BseNI ACTGG 5 cut(s) 192, 220, 325, 1333, 1352
BseRI GAGGAG 2 cut(s) 19, 929
BseXI GCAGC 5 cut(s) 331, 359, 832, 959, 1111
BseYI CCCAGC 3 cut(s) 271, 422, 1383
BsgI GTGCAG 2 cut(s) 540, 1095
Bsh1236I CGCG 1 cut(s) 564
BshFI GGCC 1 cut(s) 305
BsiHKAI GWGCWC 1 cut(s) 1030
BsiSI CCGG 1 cut(s) 1224
BslFI GGGAC 2 cut(s) 274, 553
BslI CCNNNNNNNGG 3 cut(s) 779, 1119, 1120
BsmAI GTCTC 2 cut(s) 595, 1286
BsmBI CGTCTC 1 cut(s) 1286
BsmFI GGGAC 2 cut(s) 274, 553
BsmI GAATGC 2 cut(s) 147, 163
BsnI GGCC 1 cut(s) 305
Bsp119I TTCGAA 2 cut(s) 389, 1174
Bsp1286I GDGCHC 2 cut(s) 719, 1030
Bsp1407I TGTACA 1 cut(s) 1263
Bsp143I GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
Bsp19I CCATGG 1 cut(s) 1128
BspACI CCGC 4 cut(s) 562, 564, 723, 1159
BspANI GGCC 1 cut(s) 305
BspCNI CTCAG 3 cut(s) 67, 643, 1097
BspFNI CGCG 1 cut(s) 564
BspHI TCATGA 1 cut(s) 967
BspLI GGNNCC 2 cut(s) 262, 630
BspMAI CTGCAG 1 cut(s) 822
BspPI GGATC 5 cut(s) 172, 435, 733, 764, 1402
BspT104I TTCGAA 2 cut(s) 389, 1174
BspTI CTTAAG 1 cut(s) 824
BsrDI GCAATG 3 cut(s) 402, 1149, 1524
BsrFI RCCGGY 1 cut(s) 1223
BsrGI TGTACA 1 cut(s) 1263
BsrI ACTGG 5 cut(s) 192, 220, 325, 1333, 1352
BssAI RCCGGY 1 cut(s) 1223
BssECI CCNNGG 2 cut(s) 562, 1128
BssMI GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
BssT1I CCWWGG 1 cut(s) 1128
Bst2UI CCWGG 1 cut(s) 437
Bst4CI ACNGT 5 cut(s) 35, 606, 685, 703, 1263
Bst6I CTCTTC 2 cut(s) 128, 1353
BstAFI CTTAAG 1 cut(s) 824
BstAUI TGTACA 1 cut(s) 1263
BstBI TTCGAA 2 cut(s) 389, 1174
BstC8I GCNNGC 5 cut(s) 21, 180, 571, 575, 958
BstDEI CTNAG 4 cut(s) 75, 651, 833, 1084
BstDSI CCRYGG 2 cut(s) 562, 1128
BstF5I GGATG 3 cut(s) 188, 660, 925
BstFNI CGCG 1 cut(s) 564
BstHHI GCGC 1 cut(s) 488
BstKTI GATC 8 cut(s) 167, 200, 430, 728, 772, 1186, 1315, 1397
BstMAI GTCTC 2 cut(s) 595, 1286
BstMBI GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
BstMWI GCNNNNNNNGC 9 cut(s) 179, 321, 341, 419, 570, 829, 953, 962, 1073
BstNI CCWGG 1 cut(s) 437
BstNSI RCATGY 4 cut(s) 62, 351, 417, 503
BstSCI CCNGG 1 cut(s) 435
BstSFI CTRYAG 1 cut(s) 818
BstUI CGCG 1 cut(s) 564
BstV1I GCAGC 5 cut(s) 331, 359, 832, 959, 1111
BstX2I RGATCY 1 cut(s) 1394
BstXI CCANNNNNNTGG 2 cut(s) 271, 1391
BstYI RGATCY 1 cut(s) 1394
BsuRI GGCC 1 cut(s) 305
BtgI CCRYGG 2 cut(s) 562, 1128
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 3 cut(s) 188, 660, 925
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 2 cut(s) 30, 31
Cac8I GCNNGC 5 cut(s) 21, 180, 571, 575, 958
CaiI CAGNNNCTG 1 cut(s) 675
CciI TCATGA 1 cut(s) 967
CfoI GCGC 1 cut(s) 488
Cfr10I RCCGGY 1 cut(s) 1223
Cfr13I GGNCC 1 cut(s) 261
Cfr42I CCGCGG 1 cut(s) 565
Csp6I GTAC 9 cut(s) 318, 400, 686, 924, 1264, 1326, 1332, 1338, 1404
CviQI GTAC 9 cut(s) 318, 400, 686, 924, 1264, 1326, 1332, 1338, 1404
DdeI CTNAG 4 cut(s) 75, 651, 833, 1084
DpnI GATC 8 cut(s) 166, 199, 429, 727, 771, 1185, 1314, 1396
DpnII GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
DriI GACNNNNNGTC 1 cut(s) 1087
EaeI YGGCCR 1 cut(s) 303
Eam1104I CTCTTC 2 cut(s) 128, 1353
Eam1105I GACNNNNNGTC 1 cut(s) 1087
EarI CTCTTC 2 cut(s) 128, 1353
Eco130I CCWWGG 1 cut(s) 1128
Eco24I GRGCYC 1 cut(s) 719
Eco32I GATATC 2 cut(s) 747, 1531
Eco47I GGWCC 1 cut(s) 261
Eco57I CTGAAG 1 cut(s) 267
EcoRII CCWGG 1 cut(s) 435
EcoRV GATATC 2 cut(s) 747, 1531
EcoT14I CCWWGG 1 cut(s) 1128
EcoT22I ATGCAT 2 cut(s) 147, 211
EcoT38I GRGCYC 1 cut(s) 719
ErhI CCWWGG 1 cut(s) 1128
Esp3I CGTCTC 1 cut(s) 1286
FaqI GGGAC 2 cut(s) 274, 553
FauI CCCGC 1 cut(s) 569
FblI GTMKAC 1 cut(s) 1080
Fnu4HI GCNGC 5 cut(s) 345, 373, 821, 948, 1125
FokI GGATG 3 cut(s) 175, 647, 932
FriOI GRGCYC 1 cut(s) 719
Fsp4HI GCNGC 5 cut(s) 345, 373, 821, 948, 1125
FspBI CTAG 2 cut(s) 908, 1558
GlaI GCGC 1 cut(s) 487
GluI GCNGC 5 cut(s) 345, 373, 821, 948, 1125
GsaI CCCAGC 3 cut(s) 275, 426, 1387
GsuI CTGGAG 2 cut(s) 237, 458
HaeIII GGCC 1 cut(s) 305
HapII CCGG 1 cut(s) 1224
HhaI GCGC 1 cut(s) 488
Hin6I GCGC 1 cut(s) 486
HinP1I GCGC 1 cut(s) 486
HinfI GANTC 7 cut(s) 672, 762, 787, 1082, 1088, 1243, 1363
HpaII CCGG 1 cut(s) 1224
HphI GGTGA 1 cut(s) 874
Hpy166II GTNNAC 3 cut(s) 1081, 1167, 1266
Hpy188I TCNGA 5 cut(s) 76, 247, 1087, 1093, 1399
Hpy188III TCNNGA 6 cut(s) 458, 645, 664, 729, 968, 1106
Hpy8I GTNNAC 3 cut(s) 1081, 1167, 1266
HpyAV CCTTC 3 cut(s) 476, 880, 1519
HpyCH4III ACNGT 5 cut(s) 35, 606, 685, 703, 1263
HpyCH4IV ACGT 2 cut(s) 39, 591
HpyF10VI GCNNNNNNNGC 9 cut(s) 179, 321, 341, 419, 570, 829, 953, 962, 1073
HpyF3I CTNAG 4 cut(s) 75, 651, 833, 1084
HpySE526I ACGT 2 cut(s) 39, 591
HspAI GCGC 1 cut(s) 486
KspI CCGCGG 1 cut(s) 565
Kzo9I GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
LmnI GCTCC 2 cut(s) 496, 628
Lsp1109I GCAGC 5 cut(s) 331, 359, 832, 959, 1111
LweI GCATC 2 cut(s) 99, 154
MaeI CTAG 2 cut(s) 908, 1558
MaeII ACGT 2 cut(s) 39, 591
MaeIII GTNAC 6 cut(s) 35, 44, 61, 502, 837, 1435
MalI GATC 8 cut(s) 166, 199, 429, 727, 771, 1185, 1314, 1396
MboI GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
MboII GAAGA 7 cut(s) 145, 150, 532, 535, 1043, 1322, 1340
MfeI CAATTG 1 cut(s) 337
MflI RGATCY 1 cut(s) 1394
MhlI GDGCHC 2 cut(s) 719, 1030
MlsI TGGCCA 1 cut(s) 305
MluCI AATT 9 cut(s) 239, 337, 391, 489, 843, 1170, 1316, 1452, 1497
MluNI TGGCCA 1 cut(s) 305
MlyI GAGTC 3 cut(s) 1076, 1097, 1372
MmeI TCCRAC 2 cut(s) 1071, 1309
Mox20I TGGCCA 1 cut(s) 305
Mph1103I ATGCAT 2 cut(s) 147, 211
MroXI GAANNNNTTC 2 cut(s) 671, 1242
MscI TGGCCA 1 cut(s) 305
MseI TTAA 7 cut(s) 111, 294, 447, 825, 846, 891, 1370
MslI CAYNNNNRTG 2 cut(s) 578, 1254
Msp20I TGGCCA 1 cut(s) 305
MspA1I CMGCKG 3 cut(s) 422, 564, 619
MspCI CTTAAG 1 cut(s) 824
MspI CCGG 1 cut(s) 1224
MspR9I CCNGG 1 cut(s) 437
MunI CAATTG 1 cut(s) 337
Mva1269I GAATGC 2 cut(s) 147, 163
MvaI CCWGG 1 cut(s) 437
MvnI CGCG 1 cut(s) 564
MwoI GCNNNNNNNGC 9 cut(s) 179, 321, 341, 419, 570, 829, 953, 962, 1073
NcoI CCATGG 1 cut(s) 1128
NdeII GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
NlaIV GGNNCC 2 cut(s) 262, 630
NmuCI GTSAC 3 cut(s) 35, 837, 1435
NsiI ATGCAT 2 cut(s) 147, 211
NspI RCATGY 4 cut(s) 62, 351, 417, 503
NspV TTCGAA 2 cut(s) 389, 1174
OliI CACNNNNGTG 1 cut(s) 578
PagI TCATGA 1 cut(s) 967
PctI GAATGC 2 cut(s) 147, 163
PdmI GAANNNNTTC 2 cut(s) 671, 1242
PfeI GAWTC 4 cut(s) 672, 762, 787, 1243
PfoI TCCNGGA 1 cut(s) 435
PkrI GCNGC 5 cut(s) 346, 374, 822, 949, 1126
PleI GAGTC 3 cut(s) 1076, 1096, 1371
PpsI GAGTC 3 cut(s) 1076, 1096, 1371
PshBI ATTAAT 2 cut(s) 447, 846
Psp6I CCWGG 1 cut(s) 435
PspFI CCCAGC 3 cut(s) 271, 422, 1383
PspGI CCWGG 1 cut(s) 435
PspN4I GGNNCC 2 cut(s) 262, 630
PspPI GGNCC 1 cut(s) 261
PstI CTGCAG 1 cut(s) 822
PstNI CAGNNNCTG 1 cut(s) 675
PsuI RGATCY 1 cut(s) 1394
PvuII CAGCTG 2 cut(s) 422, 619
RsaI GTAC 9 cut(s) 319, 401, 687, 925, 1265, 1327, 1333, 1339, 1405
RsaNI GTAC 9 cut(s) 318, 400, 686, 924, 1264, 1326, 1332, 1338, 1404
RseI CAYNNNNRTG 2 cut(s) 578, 1254
SacII CCGCGG 1 cut(s) 565
SaqAI TTAA 7 cut(s) 111, 294, 447, 825, 846, 891, 1370
SatI GCNGC 5 cut(s) 345, 373, 821, 948, 1125
Sau3AI GATC 8 cut(s) 164, 197, 427, 725, 769, 1183, 1312, 1394
Sau96I GGNCC 1 cut(s) 261
ScaI AGTACT 2 cut(s) 319, 1405
SchI GAGTC 3 cut(s) 1076, 1097, 1372
ScrFI CCNGG 1 cut(s) 437
SduI GDGCHC 2 cut(s) 719, 1030
SfaNI GCATC 2 cut(s) 99, 154
SfcI CTRYAG 1 cut(s) 818
Sfr303I CCGCGG 1 cut(s) 565
SfuI TTCGAA 2 cut(s) 389, 1174
SgrBI CCGCGG 1 cut(s) 565
SinI GGWCC 1 cut(s) 261
SmiMI CAYNNNNRTG 2 cut(s) 578, 1254
SmlI CTYRAG 5 cut(s) 643, 718, 776, 824, 990
SmoI CTYRAG 5 cut(s) 643, 718, 776, 824, 990
Sse9I AATT 9 cut(s) 239, 337, 391, 489, 843, 1170, 1316, 1452, 1497
SsiI CCGC 4 cut(s) 562, 564, 723, 1159
SspI AATATT 1 cut(s) 386
SspMI CTAG 2 cut(s) 908, 1558
StyD4I CCNGG 1 cut(s) 435
StyI CCWWGG 1 cut(s) 1128
TaaI ACNGT 5 cut(s) 35, 606, 685, 703, 1263
TaiI ACGT 2 cut(s) 42, 594
TaqI TCGA 5 cut(s) 381, 389, 451, 1174, 1533
TasI AATT 9 cut(s) 239, 337, 391, 489, 843, 1170, 1316, 1452, 1497
TatI WGTACW 6 cut(s) 317, 399, 1263, 1325, 1337, 1403
TfiI GAWTC 4 cut(s) 672, 762, 787, 1243
Tru1I TTAA 7 cut(s) 111, 294, 447, 825, 846, 891, 1370
Tru9I TTAA 7 cut(s) 111, 294, 447, 825, 846, 891, 1370
TscAI CASTG 2 cut(s) 30, 38
TseFI GTSAC 3 cut(s) 35, 837, 1435
TseI GCWGC 5 cut(s) 344, 372, 820, 947, 1124
Tsp45I GTSAC 3 cut(s) 35, 837, 1435
TspDTI ATGAA 3 cut(s) 862, 1077, 1251
TspGWI ACGGA 2 cut(s) 845, 1356
TspRI CASTG 2 cut(s) 30, 38
Vha464I CTTAAG 1 cut(s) 824
VpaK11BI GGWCC 1 cut(s) 261
VspI ATTAAT 2 cut(s) 447, 846
XapI RAATTY 1 cut(s) 391
XceI RCATGY 4 cut(s) 62, 351, 417, 503
XmiI GTMKAC 1 cut(s) 1080
XmnI GAANNNNTTC 2 cut(s) 671, 1242
XspI CTAG 2 cut(s) 908, 1558
ZrmI AGTACT 2 cut(s) 319, 1405
Zsp2I ATGCAT 2 cut(s) 147, 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.