MD09G1041600.v1.1

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000317
Physical Location & Seq
Reverse (-)
2703083 .. 2707129
4047 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1041600.v1.1.491

Sequence Viewer

Length: 1290 bp
ATGCAAACCGGTAACGTCATAGAAATTGGCGCACACGAAGAGCTGATTCAACGCCAAAACAGCCTCTACTCCTCATTTGTCTGTCTCCAACAAGCGATAAAAGATCCAGAAGAATGCACCGCACATATGTCCTTTCACTGCAACAATACTAGTAGTACTAGTACTAGTCTTTCATTATTGGCTGATCGACCGAACTCAAGTCCCAGGGTAGCTAGATTTGATAGTACTAGTACTGCCCCACAAAATCCAAACAGTATAAAATCCAAACACACTTCGACGTTTTGGAGATTACTGCCGATGAGTCGTCCGGAGTGGAAGCAAGCGGTTTTGGGGTGTTTGAGTGCGGTTCTGTTCGGAGCAATTCAACCGGTGTTTGGATTCATCCAGGGGGCCATGTTGTCTGTGTTTTTTGTGACGGGTTATGACGAGGTTAAAGAGAAAATAAGAACCCTTGCATTAAATTTTTTTTGGACTGTCCGTTTTACAATGGGGATTAATACCGTCGAGCATTACAATTTTGCGTACGTGGGGGAGTGCTTGACTAATCGGATTAGAGGGAGGTTGCTTTCCAAGATACTCACCTTTGAAGTCGGATGGTTTGAGGAGGATCACAATTCTAGTGGTGCCATTTGCTCTAGGCTGACCAAAGACGCTGAAATGGTGAAGACCGGTCAAACTATTGCCGATGCTGGAAGTATGACGTCGGACCTTGTCATTGGTTTGTATGCAATCGGTTCGATATTTAGTATTCTAGACAGGGCCACAGAAATTGAGCCCCAAGTTCCTGAGAACTCCCTAGTGGAAAAGACAAGGGGCATGACCCAATTTTGTCATGTTTATTTTGCATACCCAACCAGGCCGAATGTGATGATCTTCCAAGACTTCTCATTCAAAATTGAAGCAGAAAAATATACGGCGTTGGTGGGTCAAAGTGGATCAGGTAAATCGACCATCATTGGATTAATCGAGAGATTCTACGATCCAATCGAAGGATTATTGGAAATGGACGGTCGAGATTTGAGATCATACAACCTTAGGTCATTGAGGAGACAGATTGCATTGGTCAGCCAGGAACCAACGCTATTTGCCGGAACCATAAAAGACAACATTGCATACGGATCTTCCGATGATAAGGTCGACGAGACGGAGATCGTGGAGGCGGCCAAGGCGGCCAACGCTCACGATTTCATCAGCGGGTTAAAGGACGGATACAACACGTCGTGCGGGGACAAAGGAGTGCAGCTATCCGGGGGACAAAAGCAACGGATAGCAATGCCCGAGCAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

430

Amino Acids

47.68

Weight (kDa)

5.72

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 110 - 225 1.2e-12 ABC transporter transmembrane region
ABC_tran PF00005 293 - 424 1.9e-22 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 704
AccB1I GGYRCC 1 cut(s) 623
AccI GTMKAC 1 cut(s) 1137
AccIII TCCGGA 1 cut(s) 307
AciI CCGC 7 cut(s) 120, 323, 344, 1160, 1169, 1194, 1224
AclWI GGATC 5 cut(s) 98, 615, 943, 974, 1126
AcoI YGGCCR 2 cut(s) 1161, 1170
AcsI RAATTY 1 cut(s) 460
AcyI GRCGYC 1 cut(s) 701
AdeI CACNNNGTG 1 cut(s) 1221
AfaI GTAC 6 cut(s) 157, 163, 226, 232, 524, 1286
AfiI CCNNNNNNNGG 2 cut(s) 374, 989
AflIII ACRYGT 1 cut(s) 1215
AgeI ACCGGT 3 cut(s) 8, 367, 668
AgsI TTSAA 5 cut(s) 50, 365, 587, 892, 899
AhlI ACTAGT 4 cut(s) 149, 158, 164, 227
AjiI CACGTC 1 cut(s) 1218
AjnI CCWGG 4 cut(s) 203, 384, 854, 1068
AluBI AGCT 3 cut(s) 43, 212, 1243
AluI AGCT 3 cut(s) 43, 212, 1243
Alw26I GTCTC 3 cut(s) 89, 1042, 1136
AlwI GGATC 5 cut(s) 98, 615, 943, 974, 1126
Ama87I CYCGRG 1 cut(s) 1277
Aor13HI TCCGGA 1 cut(s) 307
AoxI GGCC 5 cut(s) 390, 759, 857, 1161, 1170
ApeKI GCWGC 1 cut(s) 1240
ApoI RAATTY 1 cut(s) 460
AseI ATTAAT 2 cut(s) 495, 962
AsiGI ACCGGT 3 cut(s) 8, 367, 668
AspLEI GCGC 1 cut(s) 32
AspS9I GGNCC 3 cut(s) 390, 706, 759
AsuC2I CCSGG 1 cut(s) 1249
AsuHPI GGTGA 2 cut(s) 571, 673
AvaI CYCGRG 1 cut(s) 1277
AvaII GGWCC 1 cut(s) 706
AxyI CCTNAGG 1 cut(s) 1034
BanI GGYRCC 1 cut(s) 623
BanII GRGCYC 1 cut(s) 777
BbsI GAAGAC 1 cut(s) 671
BbvI GCAGC 1 cut(s) 1252
BccI CCATC 2 cut(s) 588, 959
BceAI ACGGC 1 cut(s) 930
BcgI CGANNNNNNTGC 2 cut(s) 717, 751
BciT130I CCWGG 4 cut(s) 205, 386, 856, 1070
BciVI GTATCC 1 cut(s) 1202
BcnI CCSGG 1 cut(s) 1249
BcoDI GTCTC 3 cut(s) 89, 1042, 1136
BcuI ACTAGT 4 cut(s) 149, 158, 164, 227
BfaI CTAG 9 cut(s) 150, 159, 165, 213, 228, 618, 636, 752, 797
BfuI GTATCC 1 cut(s) 1202
BglI GCCNNNNNGGC 1 cut(s) 1169
BisI GCNGC 3 cut(s) 1161, 1170, 1241
BlsI GCNGC 3 cut(s) 1162, 1171, 1242
BmcAI AGTACT 5 cut(s) 157, 163, 226, 232, 1286
Bme1390I CCNGG 5 cut(s) 205, 386, 856, 1070, 1249
Bme18I GGWCC 1 cut(s) 706
BmeT110I CYCGRG 1 cut(s) 1277
BmgBI CACGTC 1 cut(s) 1218
BmgT120I GGNCC 3 cut(s) 390, 706, 759
BmiI GGNNCC 4 cut(s) 391, 625, 1074, 1093
BmrFI CCNGG 5 cut(s) 205, 386, 856, 1070, 1249
BmsI GCATC 1 cut(s) 676
BpiI GAAGAC 1 cut(s) 671
BpuEI CTTGAG 1 cut(s) 181
BpuMI CCSGG 1 cut(s) 1249
BsaAI YACGTR 1 cut(s) 526
BsaHI GRCGYC 1 cut(s) 701
BsaJI CCNNGG 5 cut(s) 203, 204, 385, 1164, 1248
BsaWI WCCGGW 4 cut(s) 8, 307, 367, 668
Bsc4I CCNNNNNNNGG 2 cut(s) 374, 989
Bse118I RCCGGY 3 cut(s) 8, 367, 668
Bse21I CCTNAGG 1 cut(s) 1034
Bse3DI GCAATG 2 cut(s) 1107, 1278
BseAI TCCGGA 1 cut(s) 307
BseBI CCWGG 4 cut(s) 205, 386, 856, 1070
BseDI CCNNGG 5 cut(s) 203, 204, 385, 1164, 1248
BseGI GGATG 2 cut(s) 381, 599
BseLI CCNNNNNNNGG 2 cut(s) 374, 989
BseMI GCAATG 2 cut(s) 1107, 1278
BseMII CTCAG 1 cut(s) 777
BseRI GAGGAG 3 cut(s) 61, 617, 1060
BseXI GCAGC 1 cut(s) 1252
BsgI GTGCAG 1 cut(s) 1259
Bsh1285I CGRYCG 2 cut(s) 191, 1012
BshFI GGCC 5 cut(s) 392, 761, 859, 1163, 1172
BshNI GGYRCC 1 cut(s) 623
BshTI ACCGGT 3 cut(s) 8, 367, 668
BsiEI CGRYCG 2 cut(s) 191, 1012
BsiHKCI CYCGRG 1 cut(s) 1277
BsiSI CCGG 6 cut(s) 9, 308, 368, 669, 1089, 1248
BsiWI CGTACG 1 cut(s) 522
BslFI GGGAC 3 cut(s) 186, 1241, 1266
BslI CCNNNNNNNGG 2 cut(s) 374, 989
BsmAI GTCTC 3 cut(s) 89, 1042, 1136
BsmBI CGTCTC 1 cut(s) 1136
BsmFI GGGAC 3 cut(s) 186, 1241, 1266
BsmI GAATGC 1 cut(s) 119
BsnI GGCC 5 cut(s) 392, 761, 859, 1163, 1172
BsoBI CYCGRG 1 cut(s) 1277
Bsp1286I GDGCHC 1 cut(s) 777
Bsp13I TCCGGA 1 cut(s) 307
Bsp143I GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
BspACI CCGC 7 cut(s) 120, 323, 344, 1160, 1169, 1194, 1224
BspANI GGCC 5 cut(s) 392, 761, 859, 1163, 1172
BspCNI CTCAG 1 cut(s) 778
BspEI TCCGGA 1 cut(s) 307
BspLI GGNNCC 4 cut(s) 391, 625, 1074, 1093
BspPI GGATC 5 cut(s) 98, 615, 943, 974, 1126
BspQI GCTCTTC 1 cut(s) 33
BspT107I GGYRCC 1 cut(s) 623
BsrDI GCAATG 2 cut(s) 1107, 1278
BsrFI RCCGGY 3 cut(s) 8, 367, 668
BssAI RCCGGY 3 cut(s) 8, 367, 668
BssECI CCNNGG 5 cut(s) 203, 204, 385, 1164, 1248
BssMI GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
BssNI GRCGYC 1 cut(s) 701
BssT1I CCWWGG 1 cut(s) 1164
Bst2UI CCWGG 4 cut(s) 205, 386, 856, 1070
Bst4CI ACNGT 4 cut(s) 254, 475, 502, 1010
Bst6I CTCTTC 1 cut(s) 33
BstACI GRCGYC 1 cut(s) 701
BstBAI YACGTR 1 cut(s) 526
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 786, 1034
BstF5I GGATG 2 cut(s) 381, 599
BstHHI GCGC 1 cut(s) 32
BstKTI GATC 9 cut(s) 106, 187, 610, 873, 938, 982, 1025, 1121, 1152
BstMAI GTCTC 3 cut(s) 89, 1042, 1136
BstMBI GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
BstMCI CGRYCG 2 cut(s) 191, 1012
BstMWI GCNNNNNNNGC 4 cut(s) 60, 1166, 1169, 1175
BstNI CCWGG 4 cut(s) 205, 386, 856, 1070
BstSCI CCNGG 5 cut(s) 203, 384, 854, 1068, 1247
BstV1I GCAGC 1 cut(s) 1252
BstV2I GAAGAC 1 cut(s) 671
BstX2I RGATCY 2 cut(s) 103, 1118
BstYI RGATCY 2 cut(s) 103, 1118
Bsu36I CCTNAGG 1 cut(s) 1034
BsuI GTATCC 1 cut(s) 1202
BsuRI GGCC 5 cut(s) 392, 761, 859, 1163, 1172
BtrI CACGTC 1 cut(s) 1218
BtsCI GGATG 2 cut(s) 381, 599
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 1 cut(s) 136
Cac8I GCNNGC 1 cut(s) 321
CfoI GCGC 1 cut(s) 32
Cfr10I RCCGGY 3 cut(s) 8, 367, 668
Cfr13I GGNCC 3 cut(s) 390, 706, 759
CseI GACGC 1 cut(s) 659
Csp6I GTAC 6 cut(s) 156, 162, 225, 231, 523, 1285
CspAI ACCGGT 3 cut(s) 8, 367, 668
CspCI CAANNNNNGTGG 4 cut(s) 601, 636, 751, 786
CviAII CATG 3 cut(s) 394, 817, 833
CviQI GTAC 6 cut(s) 156, 162, 225, 231, 523, 1285
DdeI CTNAG 2 cut(s) 786, 1034
DpnI GATC 9 cut(s) 105, 186, 609, 872, 937, 981, 1024, 1120, 1151
DpnII GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
DraIII CACNNNGTG 1 cut(s) 1221
EaeI YGGCCR 2 cut(s) 1161, 1170
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
Eco130I CCWWGG 1 cut(s) 1164
Eco24I GRGCYC 1 cut(s) 777
Eco47I GGWCC 1 cut(s) 706
Eco81I CCTNAGG 1 cut(s) 1034
Eco88I CYCGRG 1 cut(s) 1277
EcoRII CCWGG 4 cut(s) 203, 384, 854, 1068
EcoT14I CCWWGG 1 cut(s) 1164
EcoT38I GRGCYC 1 cut(s) 777
ErhI CCWWGG 1 cut(s) 1164
Esp3I CGTCTC 1 cut(s) 1136
FaeI CATG 3 cut(s) 397, 820, 836
FaqI GGGAC 3 cut(s) 186, 1241, 1266
FatI CATG 3 cut(s) 393, 816, 832
FauI CCCGC 2 cut(s) 1187, 1217
FauNDI CATATG 1 cut(s) 126
FblI GTMKAC 1 cut(s) 1137
Fnu4HI GCNGC 3 cut(s) 1161, 1170, 1241
FokI GGATG 2 cut(s) 368, 606
FriOI GRGCYC 1 cut(s) 777
Fsp4HI GCNGC 3 cut(s) 1161, 1170, 1241
FspBI CTAG 9 cut(s) 150, 159, 165, 213, 228, 618, 636, 752, 797
GlaI GCGC 1 cut(s) 31
GluI GCNGC 3 cut(s) 1161, 1170, 1241
HaeIII GGCC 5 cut(s) 392, 761, 859, 1163, 1172
HapII CCGG 6 cut(s) 9, 308, 368, 669, 1089, 1248
HgaI GACGC 1 cut(s) 659
HhaI GCGC 1 cut(s) 32
Hin1I GRCGYC 1 cut(s) 701
Hin1II CATG 3 cut(s) 397, 820, 836
Hin6I GCGC 1 cut(s) 30
HinP1I GCGC 1 cut(s) 30
HincII GTYRAC 1 cut(s) 1138
HindII GTYRAC 1 cut(s) 1138
HinfI GANTC 4 cut(s) 46, 301, 378, 972
HpaII CCGG 6 cut(s) 9, 308, 368, 669, 1089, 1248
HphI GGTGA 2 cut(s) 571, 673
Hpy166II GTNNAC 1 cut(s) 1138
Hpy188I TCNGA 5 cut(s) 356, 549, 593, 706, 1126
Hpy188III TCNNGA 7 cut(s) 107, 308, 752, 785, 967, 1013, 1181
Hpy8I GTNNAC 1 cut(s) 1138
Hpy99I CGWCG 5 cut(s) 280, 506, 706, 1142, 1222
HpyAV CCTTC 1 cut(s) 983
HpyCH4III ACNGT 4 cut(s) 254, 475, 502, 1010
HpyCH4IV ACGT 5 cut(s) 15, 278, 525, 701, 1217
HpyCH4V TGCA 9 cut(s) 4, 117, 141, 455, 728, 845, 1058, 1112, 1240
HpyF10VI GCNNNNNNNGC 4 cut(s) 60, 1166, 1169, 1175
HpyF3I CTNAG 2 cut(s) 786, 1034
HpySE526I ACGT 5 cut(s) 15, 278, 525, 701, 1217
Hsp92I GRCGYC 1 cut(s) 701
Hsp92II CATG 3 cut(s) 397, 820, 836
HspAI GCGC 1 cut(s) 30
Kpn2I TCCGGA 1 cut(s) 307
Kzo9I GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 1 cut(s) 356
Lsp1109I GCAGC 1 cut(s) 1252
LweI GCATC 1 cut(s) 676
MaeI CTAG 9 cut(s) 150, 159, 165, 213, 228, 618, 636, 752, 797
MaeII ACGT 5 cut(s) 15, 278, 525, 701, 1217
MaeIII GTNAC 2 cut(s) 11, 412
MalI GATC 9 cut(s) 105, 186, 609, 872, 937, 981, 1024, 1120, 1151
MboI GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
MboII GAAGA 5 cut(s) 50, 122, 676, 865, 1113
MflI RGATCY 2 cut(s) 103, 1118
MhlI GDGCHC 1 cut(s) 777
MluCI AATT 8 cut(s) 24, 360, 460, 514, 613, 768, 824, 894
MlyI GAGTC 1 cut(s) 310
MmeI TCCRAC 3 cut(s) 112, 571, 684
MnlI CCTC 9 cut(s) 74, 82, 421, 548, 552, 595, 598, 1038, 1150
MroI TCCGGA 1 cut(s) 307
MseI TTAA 5 cut(s) 432, 458, 495, 962, 1199
MspA1I CMGCKG 1 cut(s) 1194
MspI CCGG 6 cut(s) 9, 308, 368, 669, 1089, 1248
MspR9I CCNGG 5 cut(s) 205, 386, 856, 1070, 1249
Mva1269I GAATGC 1 cut(s) 119
MvaI CCWGG 4 cut(s) 205, 386, 856, 1070
MwoI GCNNNNNNNGC 4 cut(s) 60, 1166, 1169, 1175
NciI CCSGG 1 cut(s) 1249
NdeI CATATG 1 cut(s) 126
NdeII GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
NlaIII CATG 3 cut(s) 397, 820, 836
NlaIV GGNNCC 4 cut(s) 391, 625, 1074, 1093
NmuCI GTSAC 1 cut(s) 412
PasI CCCWGGG 1 cut(s) 204
PciSI GCTCTTC 1 cut(s) 33
PcsI WCGNNNNNNNCGW 2 cut(s) 984, 1122
PctI GAATGC 1 cut(s) 119
PfeI GAWTC 3 cut(s) 46, 378, 972
Pfl23II CGTACG 1 cut(s) 522
PflFI GACNNNGTC 1 cut(s) 710
PinAI ACCGGT 3 cut(s) 8, 367, 668
PkrI GCNGC 3 cut(s) 1162, 1171, 1242
PleI GAGTC 1 cut(s) 309
PpsI GAGTC 1 cut(s) 309
Ppu21I YACGTR 1 cut(s) 526
PshBI ATTAAT 2 cut(s) 495, 962
Psp6I CCWGG 4 cut(s) 203, 384, 854, 1068
PspGI CCWGG 4 cut(s) 203, 384, 854, 1068
PspLI CGTACG 1 cut(s) 522
PspN4I GGNNCC 4 cut(s) 391, 625, 1074, 1093
PspPI GGNCC 3 cut(s) 390, 706, 759
PsuI RGATCY 2 cut(s) 103, 1118
PsyI GACNNNGTC 1 cut(s) 710
RsaI GTAC 6 cut(s) 157, 163, 226, 232, 524, 1286
RsaNI GTAC 6 cut(s) 156, 162, 225, 231, 523, 1285
SalI GTCGAC 1 cut(s) 1136
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 5 cut(s) 432, 458, 495, 962, 1199
SatI GCNGC 3 cut(s) 1161, 1170, 1241
Sau3AI GATC 9 cut(s) 103, 184, 607, 870, 935, 979, 1022, 1118, 1149
Sau96I GGNCC 3 cut(s) 390, 706, 759
ScaI AGTACT 5 cut(s) 157, 163, 226, 232, 1286
SchI GAGTC 1 cut(s) 310
ScrFI CCNGG 5 cut(s) 205, 386, 856, 1070, 1249
SduI GDGCHC 1 cut(s) 777
SfaNI GCATC 1 cut(s) 676
SfiI GGCCNNNNNGGCC 1 cut(s) 1169
SinI GGWCC 1 cut(s) 706
SmlI CTYRAG 1 cut(s) 196
SmoI CTYRAG 1 cut(s) 196
SpeI ACTAGT 4 cut(s) 149, 158, 164, 227
Sse9I AATT 8 cut(s) 24, 360, 460, 514, 613, 768, 824, 894
SsiI CCGC 7 cut(s) 120, 323, 344, 1160, 1169, 1194, 1224
SspMI CTAG 9 cut(s) 150, 159, 165, 213, 228, 618, 636, 752, 797
StyD4I CCNGG 5 cut(s) 203, 384, 854, 1068, 1247
StyI CCWWGG 1 cut(s) 1164
TaaI ACNGT 4 cut(s) 254, 475, 502, 1010
TaiI ACGT 5 cut(s) 18, 281, 528, 704, 1220
TaqI TCGA 9 cut(s) 187, 275, 504, 737, 947, 966, 987, 1012, 1137
TaqII GACCGA 1 cut(s) 205
TasI AATT 8 cut(s) 24, 360, 460, 514, 613, 768, 824, 894
TatI WGTACW 5 cut(s) 155, 161, 224, 230, 1284
TauI GCSGC 2 cut(s) 1163, 1172
TfiI GAWTC 3 cut(s) 46, 378, 972
Tru1I TTAA 5 cut(s) 432, 458, 495, 962, 1199
Tru9I TTAA 5 cut(s) 432, 458, 495, 962, 1199
TscAI CASTG 1 cut(s) 143
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 1 cut(s) 1240
Tsp45I GTSAC 1 cut(s) 412
TspDTI ATGAA 3 cut(s) 162, 370, 1177
TspGWI ACGGA 5 cut(s) 467, 1131, 1160, 1221, 1279
TspRI CASTG 1 cut(s) 143
Tth111I GACNNNGTC 1 cut(s) 710
VpaK11BI GGWCC 1 cut(s) 706
VspI ATTAAT 2 cut(s) 495, 962
XapI RAATTY 1 cut(s) 460
XbaI TCTAGA 1 cut(s) 751
XmiI GTMKAC 1 cut(s) 1137
XspI CTAG 9 cut(s) 150, 159, 165, 213, 228, 618, 636, 752, 797
ZraI GACGTC 1 cut(s) 702
ZrmI AGTACT 5 cut(s) 157, 163, 226, 232, 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.