Prupe.1G241000_v2.0.a1

Multidrug resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000317
Physical Location & Seq
Forward (+)
25511927 .. 25516709
4783 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G241000.1

Sequence Viewer

Length: 3834 bp
ATGGGGAAGAAGGGAGGGCTTTTCAAGTATGCAGATGGTGTGGACAAGTTGCTGATGGTGTTTGGGACTTTGGGCAGCATTGGAGATGGGTTGATGACACCTCTTACAATGCTTGTTCTCAGCCGTGTGATCAATGAATATGGAGGTGGAGAAGGCACTCTTACTTTCTCCAATGCCATTGTGGACAAGTACTCACTCAGGCTGCTCATTGTTGCAATTGGAGTTGGAGTATCTGCTTTCATTGAAGGAATTTGTTGGACCAGAACTGCTGAGAGACAGACATCTCGGATGAGAATGGAATACTTAAAGTCAGTCCTCAGGCAAGAAGTTGCCTTCTTTGACAGTCAAGCTAATTCTTCCATGACCTTCCAAGTCATTTCTACTATCTCGTCTGATGCCCATTTAATCCAAGACACAATAGCTGAAAAGATGCCAAACTGCCTGGCTCACCTCTCATCATTCCTCTTCTGCTTTCCTGTTGCCTTCGTGCTTTCTTGGCGGCTGGCACTGGCTGCTCTTCCGTTCTCCCTCATGTTTTTGATTCCTGGAATTGTATTTGGGAAGGTGCTCAAGGACTTGGGAGCTGAGACAAACGGTGCCTATAGGGTTGCTGGAGGGATTGCGGAACAAGCAATCTCATCAATCCGTACAGTTTATTCGTATGTTGGGGAAAATCAAACACTAAAAAAGTTCAGCATTGCTCTTGAAAAAAGTACAGAGCTCGGCATAAAACAAGGTTTCACAAAGGGACTTCTCATAGGGAGCATGGGAATGATTTATGCTGTTTGGGCTTTTCAGGCTTGGGTTGGTAGCAAACTTGTTACTGAGAGAGGAGAAAAAGGTGGTCTTGTTTTTATTTCTGGAATCTGTGTAATTCTGGGAGGATTGGCCATTATGAATGCGCTTCCAAATCTCTCTTTTATCACCCAGGCTACTGATGCTGCTGCCAGAATATTTGAAATGATTGACCGCATTCCTGCTATTGACTCTGAAGATGAAAGGGGAAAAGTTTTAGCATATGTGAAGGGCGATATCGAATTTAGAAAGGTTAATTTCTGCTATCCATCAAGACCTGATACCCCAGTTCTTCAAGGACTCAACCTTAAAGTCCAAGCTGGTAAGATGGTGGGTCTTGTTGGAGGCAGTGGTTCTGGAAAGTCAACAATCATTTCTTTACTTGAAAGATTTTATGATCCAGTAAAAGGAGATATTCTCCTTGACGGATACAAGTTAAATAAATTTCAGCTGCAATGGTTGAGATCCCAGATGGGACTGGTCAATCAAGAGCCAATTCTCTTTGCAACATCCATAAAAGAGAATATTTTATTTGGAAAGGAAGGAGCTTCAATGGAACTTGTAATAAGTGCAGCTAAGGCTGCAAATGCACATGACTTCATTGTCAAACTCCCCCTAGGATTTGACACTCAAGTTGGGCAATTTGGAGTTCAATTGTCTGGAGGACAAAAGCAAAGGATTTCTATAGCAAGAGCAATAATCAGAGACCCAAAAATTCTTTTGCTTGATGAAGCCACAAGTGCTTTGGATGCGCAATCTGAAAAAGTTGTGCAAGAAGCCTTGGACCAAGCTTCACAAGGAAGAACAACAATTGTCATAGCTCACCGCCTCACCACAATCCGCAAGGCTGATTTGATAGTGGTTCTTCAATCAGGTAGAGTGGTGGAAATGGGATCTCATGAGGACTTGGTCCACAAGAACGATGGAGAAGGTGGAGCATACAGTAAAATGCTGCAATTGCAGCAACAAGCAATGCGGAATGGTCCTGACATTTCCTATCATCCAGAGGATATTATAATCAAGCATCCACGAACTCCACATACACCAAATAGTGTGAGATCAAGCTTGCAAAACAGCCCTGCACTGAGGAGTGCGAGATCAAGCTGGCAAAACAGCCCGGTACCAAGGAATGTAAGATCAAGCTGGCAAAACAGCCCGGCATATCCAATCACCCCAATATTTTCCATCAGCATTACAAACTCCTTTCAAGCAGGCCAGTATGATGAATTTGACGATGAAATGTCACAAGACAGCTCTTATCCTTCCTCTTCTACTTGGCGTTTATTTAAAATGAATGCACCTGAGTGGAAGCAAGCAATACTAGGGTGTCTAGGGGCTGCTGGCTTTGGATCTATTCAGCCAGTTCATGCCTATTGCTTAGGAACAGTTGTAGCAGTTTACTTCCAAACAAACAATTCCACCATCAAATCAGAAACCAGATTCTACTGCTACATCTTCTTAAGCCTAGCAGTTTTCAGCTTCATTGCTAATCTCCTCCAACATTACAATTTTGCAGTTATGGGAGAGCGTTTATCCAAAAGGGTTCGAATAAAAATGCTCGAAAAAATTCTCACCTTTGAGATAGGGTGGTTTGATCAGGATGAAAACACAAGTGCTGCCATCTGTGCACGGCTAACCACTGAAGCAAACATGGTTAGATCCCTCACTGCAGATCGTATATCATTGTTGGTTCAGGTCTTTTTCAGTGCCTCCATAGCTTTTGTGATTGGACTGATAGTAACATGGAGGATAGCCATTGTAATGATTGCAATACAACCTTTGCTCATAGGAAGCTTCTATTCAAGGAGTGTTCTAATGAAGAGTATGTCTATAAAAGCACAGAAAGCACAGGCTGAGGGTAGCCAACTAGCTAGTGAAGCTGCTTTCAACCACAGAACTATCACTGCATTTTCCTCTCAGAATAGGATATTAAATCTGTTTGGAGATGCAATGAGAGGGCCTAGGAAGGAGAACATCAAACAGTCATGGATTTCAGGTTTTGGTCTGTTCAGCTCCCAATTCTTGACAACAGCTGCAATAGCCTTGACTTATTGGTATGGGGGGAGGCTAATGAATCAAAATTTAGTAACGGCGAAACACCTGTTTCAAGTTTTCTTCATCTTAATGAGCACTGGTAAAAACATTGCAGATGCAGGAAGCATGACTTCTGATCTAGCGAGAGGGGGGAGAGCCATCAAATCAATATTCTCCATCCTAGGCAGAGAGAGTGAAATTTCATCAGAAGAGCTTGAAGGGATAAAAAAGACTTTCAAGGGTCACATAGAACTAAAGAATGTTGTATTTGCTTACCCAGTCAGGCCTGACCAGATGATCTTCAAGGGCCTGAATCTCAAGATAGAAGCTGGAAAAACAATGGCACTAGTGGGACAGAGTGGTTCTGGAAAATCCACTGTCATTGGCTTGATTGAAAGATTTTATGACCCACTAAATGGATCAGTATCCATAGATGGATGTGACATCAAGCTCTATAATTTGAGAAAGTTGAGGTCACAAATAGCTTTAGTAAGCCAGGAGCCTACTCTTTTTGGAGGAACCATCCATGAAAACATAGTCTATGGTAAAGAAAATGCAACAGTAGCTGAAGTAAGAAAGGCAGCAAAGCTTGCCAATGCTCATGAATTTATAAGCTCTATGGAAGAGGGATATGAGACTTACTGTGGAGAAAGAGGAGTTCAACTATCAGGAGGGCAGAAGCAGAGGATAGCACTTGCACGAGCGATGCTAAAGAACCCAACAATCCTTCTGCTGGATGAAGCAACCAGTGCACTTGATAGTGTGTCAGAGAATTTAGTCCAGGAAGCACTGGAGAAGATGATGGTTGGCAGAACATGTGTTGTTGTAGCTCACAGGTTGTCAACTATACAAAAAGCAGACTCCATTGCTGTGATAGTGAATGGGAAAGTAGCAGAAAAAGGATCACACCATGAGCTACTTGCTATCGGACATGGCGGTGCCTACCATTCTCTGATAAAACTGCAAATCAATCAGTCTCCATACCATTTGTCCATGCAGGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1278

Amino Acids

139.96

Weight (kDa)

9.12

Isoelectric Point (pI)

34.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1811, 3440
AarI CACCTGC 1 cut(s) 3817
AasI GACNNNNNNGTC 1 cut(s) 1397
Acc16I TGCGCA 1 cut(s) 1548
Acc36I ACCTGC 1 cut(s) 3817
Acc65I GGTACC 1 cut(s) 1915
AccB1I GGYRCC 3 cut(s) 596, 1915, 3767
AccB7I CCANNNNNTGG 1 cut(s) 3245
AciI CCGC 7 cut(s) 499, 623, 970, 1621, 1636, 1771, 3765
AclWI GGATC 7 cut(s) 1187, 1254, 1696, 2152, 2448, 3256, 3739
AcoI YGGCCR 1 cut(s) 888
AcuI CTGAAG 3 cut(s) 1011, 2457, 3417
AfaI GTAC 4 cut(s) 191, 649, 715, 1917
AfiI CCNNNNNNNGG 3 cut(s) 1202, 3245, 3562
AflII CTTAAG 1 cut(s) 2254
AflIII ACRYGT 1 cut(s) 3644
AhlI ACTAGT 1 cut(s) 3175
AjnI CCWGG 5 cut(s) 441, 544, 927, 3324, 3609
AleI CACNNNNGTG 1 cut(s) 2098
Alw21I GWGCWC 5 cut(s) 570, 723, 2425, 2927, 3583
Alw26I GTCTC 5 cut(s) 268, 581, 1494, 3458, 3810
Alw44I GTGCAC 2 cut(s) 2421, 3579
AlwI GGATC 7 cut(s) 1187, 1254, 1696, 2152, 2448, 3256, 3739
AlwNI CAGNNNCTG 1 cut(s) 3395
AoxI GGCC 5 cut(s) 888, 2008, 2753, 3113, 3136
ApaLI GTGCAC 2 cut(s) 2421, 3579
Asp700I GAANNNNTTC 1 cut(s) 2361
Asp718I GGTACC 1 cut(s) 1915
AspA2I CCTAGG 3 cut(s) 1411, 2756, 3010
AspLEI GCGC 2 cut(s) 904, 1549
AspS9I GGNCC 6 cut(s) 258, 1579, 1705, 1778, 2753, 3136
AsuC2I CCSGG 2 cut(s) 1913, 1952
AsuHPI GGTGA 6 cut(s) 440, 916, 1610, 1618, 1957, 2359
AsuII TTCGAA 1 cut(s) 2341
AvaII GGWCC 4 cut(s) 258, 1579, 1705, 1778
AvrII CCTAGG 3 cut(s) 1411, 2756, 3010
AxyI CCTNAGG 1 cut(s) 317
BaeGI GKGCMC 2 cut(s) 2425, 3583
BaeI ACNNNNGTAYC 2 cut(s) 1068, 1101
BalI TGGCCA 1 cut(s) 890
BanI GGYRCC 3 cut(s) 596, 1915, 3767
BanII GRGCYC 1 cut(s) 723
BauI CACGAG 1 cut(s) 3528
Bbv12I GWGCWC 5 cut(s) 570, 723, 2425, 2927, 3583
BbvCI CCTCAGC 1 cut(s) 2649
BceAI ACGGC 3 cut(s) 108, 2441, 2901
BciT130I CCWGG 5 cut(s) 443, 546, 929, 3326, 3611
BciVI GTATCC 2 cut(s) 1217, 3265
BclI TGATCA 2 cut(s) 129, 2389
BcnI CCSGG 2 cut(s) 1913, 1952
BcoDI GTCTC 5 cut(s) 268, 581, 1494, 3458, 3810
BcuI ACTAGT 1 cut(s) 3175
BfmI CTRYAG 3 cut(s) 601, 1479, 2463
BfrI CTTAAG 1 cut(s) 2254
BfuAI ACCTGC 1 cut(s) 3817
BfuI GTATCC 2 cut(s) 1217, 3265
BlnI CCTAGG 3 cut(s) 1411, 2756, 3010
BmcAI AGTACT 1 cut(s) 191
Bme1390I CCNGG 7 cut(s) 443, 546, 929, 1913, 1952, 3326, 3611
Bme18I GGWCC 4 cut(s) 258, 1579, 1705, 1778
BmgT120I GGNCC 6 cut(s) 258, 1579, 1705, 1778, 2753, 3136
BmiI GGNNCC 5 cut(s) 598, 1917, 3330, 3349, 3769
BmrFI CCNGG 7 cut(s) 443, 546, 929, 1913, 1952, 3326, 3611
BmrI ACTGGG 2 cut(s) 1076, 3101
BmsI GCATC 8 cut(s) 385, 420, 928, 1534, 1828, 2731, 2935, 3525
BmuI ACTGGG 2 cut(s) 1076, 3101
BplI GAGNNNNNCTC 2 cut(s) 1197, 1229
BpmI CTGGAG 3 cut(s) 633, 1476, 3641
Bpu10I CCTNAGC 3 cut(s) 1371, 2173, 2649
Bpu14I TTCGAA 1 cut(s) 2341
BpuEI CTTGAG 3 cut(s) 554, 1410, 3131
BpuMI CCSGG 2 cut(s) 1913, 1952
BsaBI GATNNNNATC 1 cut(s) 3253
BsaI GGTCTC 1 cut(s) 1494
BsaJI CCNNGG 6 cut(s) 927, 1411, 1575, 1919, 2756, 3010
BsaXI ACNNNNNCTCC 2 cut(s) 213, 243
Bsc4I CCNNNNNNNGG 3 cut(s) 1202, 3245, 3562
Bse21I CCTNAGG 1 cut(s) 317
Bse3DI GCAATG 7 cut(s) 696, 1256, 1773, 2277, 2751, 2937, 3693
Bse8I GATNNNNATC 1 cut(s) 3253
BseBI CCWGG 5 cut(s) 443, 546, 929, 3326, 3611
BseDI CCNNGG 6 cut(s) 927, 1411, 1575, 1919, 2756, 3010
BseJI GATNNNNATC 1 cut(s) 3253
BseLI CCNNNNNNNGG 3 cut(s) 1202, 3245, 3562
BseMI GCAATG 7 cut(s) 696, 1256, 1773, 2277, 2751, 2937, 3693
BseRI GAGGAG 4 cut(s) 846, 1897, 2279, 3498
BseSI GKGCMC 2 cut(s) 2425, 3583
BsgI GTGCAG 2 cut(s) 1386, 1860
BshFI GGCC 5 cut(s) 890, 2010, 2755, 3115, 3138
BshNI GGYRCC 3 cut(s) 596, 1915, 3767
BsiHKAI GWGCWC 5 cut(s) 570, 723, 2425, 2927, 3583
BsiSI CCGG 2 cut(s) 1913, 1952
BslFI GGGAC 4 cut(s) 79, 762, 1284, 3195
BslI CCNNNNNNNGG 3 cut(s) 1202, 3245, 3562
BsmAI GTCTC 5 cut(s) 268, 581, 1494, 3458, 3810
BsmFI GGGAC 4 cut(s) 79, 762, 1284, 3195
BsmI GAATGC 3 cut(s) 904, 972, 2095
BsnI GGCC 5 cut(s) 890, 2010, 2755, 3115, 3138
Bso31I GGTCTC 1 cut(s) 1494
Bsp119I TTCGAA 1 cut(s) 2341
Bsp1286I GDGCHC 5 cut(s) 570, 723, 2425, 2927, 3583
BspACI CCGC 7 cut(s) 499, 623, 970, 1621, 1636, 1771, 3765
BspANI GGCC 5 cut(s) 890, 2010, 2755, 3115, 3138
BspHI TCATGA 2 cut(s) 1693, 3430
BspLI GGNNCC 5 cut(s) 598, 1917, 3330, 3349, 3769
BspMAI CTGCAG 1 cut(s) 2467
BspMI ACCTGC 1 cut(s) 3817
BspPI GGATC 7 cut(s) 1187, 1254, 1696, 2152, 2448, 3256, 3739
BspQI GCTCTTC 2 cut(s) 522, 3033
BspT104I TTCGAA 1 cut(s) 2341
BspT107I GGYRCC 3 cut(s) 596, 1915, 3767
BspTI CTTAAG 1 cut(s) 2254
BspTNI GGTCTC 1 cut(s) 1494
BsrDI GCAATG 7 cut(s) 696, 1256, 1773, 2277, 2751, 2937, 3693
BssECI CCNNGG 6 cut(s) 927, 1411, 1575, 1919, 2756, 3010
BssSI CACGAG 1 cut(s) 3528
BssT1I CCWWGG 5 cut(s) 1411, 1575, 1919, 2756, 3010
Bst2BI CACGAG 1 cut(s) 3528
Bst2UI CCWGG 5 cut(s) 443, 546, 929, 3326, 3611
Bst4CI ACNGT 9 cut(s) 344, 596, 652, 1739, 2182, 2778, 3208, 3391, 3473
Bst6I CTCTTC 6 cut(s) 470, 522, 2068, 2609, 3033, 3447
BstAFI CTTAAG 1 cut(s) 2254
BstAPI GCANNNNNTGC 3 cut(s) 512, 3419, 3578
BstBI TTCGAA 1 cut(s) 2341
BstC8I GCNNGC 8 cut(s) 504, 1862, 1901, 1940, 2008, 2109, 2137, 3420
BstHHI GCGC 2 cut(s) 904, 1549
BstMAI GTCTC 5 cut(s) 268, 581, 1494, 3458, 3810
BstNI CCWGG 5 cut(s) 443, 546, 929, 3326, 3611
BstNSI RCATGY 1 cut(s) 3648
BstSCI CCNGG 7 cut(s) 441, 544, 927, 1911, 1950, 3324, 3609
BstSFI CTRYAG 3 cut(s) 601, 1479, 2463
BstSLI GKGCMC 2 cut(s) 2425, 3583
BstX2I RGATCY 4 cut(s) 1259, 1688, 2144, 2453
BstYI RGATCY 4 cut(s) 1259, 1688, 2144, 2453
Bsu36I CCTNAGG 1 cut(s) 317
BsuI GTATCC 2 cut(s) 1217, 3265
BsuRI GGCC 5 cut(s) 890, 2010, 2755, 3115, 3138
BtgZI GCGATG 1 cut(s) 3548
BtsI GCAGTG 3 cut(s) 1150, 2460, 2697
BveI ACCTGC 1 cut(s) 3817
Cac8I GCNNGC 8 cut(s) 504, 1862, 1901, 1940, 2008, 2109, 2137, 3420
CaiI CAGNNNCTG 1 cut(s) 3395
CciI TCATGA 2 cut(s) 1693, 3430
CfoI GCGC 2 cut(s) 904, 1549
Cfr13I GGNCC 6 cut(s) 258, 1579, 1705, 1778, 2753, 3136
Csp6I GTAC 4 cut(s) 190, 648, 714, 1916
CspCI CAANNNNNGTGG 2 cut(s) 3193, 3228
CviQI GTAC 4 cut(s) 190, 648, 714, 1916
DraI TTTAAA 1 cut(s) 2083
DrdI GACNNNNNNGTC 1 cut(s) 1397
DseDI GACNNNNNNGTC 1 cut(s) 1397
EaeI YGGCCR 1 cut(s) 888
Eam1104I CTCTTC 6 cut(s) 470, 522, 2068, 2609, 3033, 3447
EarI CTCTTC 6 cut(s) 470, 522, 2068, 2609, 3033, 3447
Ecl136II GAGCTC 1 cut(s) 721
Eco130I CCWWGG 5 cut(s) 1411, 1575, 1919, 2756, 3010
Eco147I AGGCCT 1 cut(s) 3115
Eco24I GRGCYC 1 cut(s) 723
Eco31I GGTCTC 1 cut(s) 1494
Eco32I GATATC 1 cut(s) 1033
Eco47I GGWCC 4 cut(s) 258, 1579, 1705, 1778
Eco53kI GAGCTC 1 cut(s) 721
Eco57I CTGAAG 3 cut(s) 1011, 2457, 3417
Eco81I CCTNAGG 1 cut(s) 317
EcoICRI GAGCTC 1 cut(s) 721
EcoO109I RGGNCCY 2 cut(s) 2753, 3136
EcoRII CCWGG 5 cut(s) 441, 544, 927, 3324, 3609
EcoRV GATATC 1 cut(s) 1033
EcoT14I CCWWGG 5 cut(s) 1411, 1575, 1919, 2756, 3010
EcoT38I GRGCYC 1 cut(s) 723
ErhI CCWWGG 5 cut(s) 1411, 1575, 1919, 2756, 3010
FalI AAGNNNNNCTT 6 cut(s) 144, 176, 831, 863, 2944, 2976
FaqI GGGAC 4 cut(s) 79, 762, 1284, 3195
FauNDI CATATG 1 cut(s) 1018
FbaI TGATCA 2 cut(s) 129, 2389
FriOI GRGCYC 1 cut(s) 723
FspI TGCGCA 1 cut(s) 1548
GlaI GCGC 2 cut(s) 903, 1548
GsuI CTGGAG 3 cut(s) 633, 1476, 3641
HaeIII GGCC 5 cut(s) 890, 2010, 2755, 3115, 3138
HapII CCGG 2 cut(s) 1913, 1952
HhaI GCGC 2 cut(s) 904, 1549
Hin6I GCGC 2 cut(s) 902, 1547
HinP1I GCGC 2 cut(s) 902, 1547
HincII GTYRAC 2 cut(s) 1161, 3672
HindII GTYRAC 2 cut(s) 1161, 3672
HindIII AAGCTT 4 cut(s) 1584, 1858, 2587, 3416
HinfI GANTC 8 cut(s) 541, 864, 986, 1095, 2235, 2869, 3142, 3689
HpaII CCGG 2 cut(s) 1913, 1952
HphI GGTGA 6 cut(s) 440, 916, 1610, 1618, 1957, 2359
Hpy166II GTNNAC 8 cut(s) 43, 184, 1161, 1708, 2194, 2423, 3581, 3672
Hpy8I GTNNAC 8 cut(s) 43, 184, 1161, 1708, 2194, 2423, 3581, 3672
HpyCH4III ACNGT 9 cut(s) 344, 596, 652, 1739, 2182, 2778, 3208, 3391, 3473
HspAI GCGC 2 cut(s) 902, 1547
KpnI GGTACC 1 cut(s) 1919
Ksp22I TGATCA 2 cut(s) 129, 2389
LguI GCTCTTC 2 cut(s) 522, 3033
LmnI GCTCC 6 cut(s) 581, 762, 1340, 1730, 2813, 3328
LweI GCATC 8 cut(s) 385, 420, 928, 1534, 1828, 2731, 2935, 3525
MaeIII GTNAC 7 cut(s) 820, 2037, 2533, 2881, 3071, 3269, 3303
MfeI CAATTG 4 cut(s) 216, 1448, 1605, 1751
MflI RGATCY 4 cut(s) 1259, 1688, 2144, 2453
MhlI GDGCHC 5 cut(s) 570, 723, 2425, 2927, 3583
MlsI TGGCCA 1 cut(s) 890
MluNI TGGCCA 1 cut(s) 890
MlyI GAGTC 3 cut(s) 980, 1089, 3683
MmeI TCCRAC 4 cut(s) 205, 236, 1117, 2317
Mox20I TGGCCA 1 cut(s) 890
MroXI GAANNNNTTC 1 cut(s) 2361
MscI TGGCCA 1 cut(s) 890
MseI TTAA 9 cut(s) 305, 404, 1050, 1104, 1232, 2082, 2255, 2726, 2918
MslI CAYNNNNRTG 7 cut(s) 770, 2098, 2555, 2918, 3698, 3765, 3827
Msp20I TGGCCA 1 cut(s) 890
MspA1I CMGCKG 2 cut(s) 1246, 2828
MspCI CTTAAG 1 cut(s) 2254
MspI CCGG 2 cut(s) 1913, 1952
MspR9I CCNGG 7 cut(s) 443, 546, 929, 1913, 1952, 3326, 3611
MunI CAATTG 4 cut(s) 216, 1448, 1605, 1751
Mva1269I GAATGC 3 cut(s) 904, 972, 2095
MvaI CCWGG 5 cut(s) 443, 546, 929, 3326, 3611
NciI CCSGG 2 cut(s) 1913, 1952
NdeI CATATG 1 cut(s) 1018
NlaIV GGNNCC 5 cut(s) 598, 1917, 3330, 3349, 3769
NmeAIII GCCGAG 1 cut(s) 702
NmuCI GTSAC 4 cut(s) 2037, 3071, 3269, 3303
NsbI TGCGCA 1 cut(s) 1548
NspI RCATGY 1 cut(s) 3648
NspV TTCGAA 1 cut(s) 2341
OliI CACNNNNGTG 1 cut(s) 2098
PagI TCATGA 2 cut(s) 1693, 3430
PaqCI CACCTGC 1 cut(s) 3817
PceI AGGCCT 1 cut(s) 3115
PciI ACATGT 1 cut(s) 3644
PciSI GCTCTTC 2 cut(s) 522, 3033
PctI GAATGC 3 cut(s) 904, 972, 2095
PdmI GAANNNNTTC 1 cut(s) 2361
PfeI GAWTC 5 cut(s) 541, 864, 2235, 2869, 3142
PflFI GACNNNGTC 1 cut(s) 1703
PflMI CCANNNNNTGG 1 cut(s) 3245
PfoI TCCNGGA 2 cut(s) 544, 3609
PleI GAGTC 3 cut(s) 980, 1089, 3683
PpsI GAGTC 3 cut(s) 980, 1089, 3683
PscI ACATGT 1 cut(s) 3644
PsiI TTATAA 2 cut(s) 1811, 3440
Psp124BI GAGCTC 1 cut(s) 723
Psp6I CCWGG 5 cut(s) 441, 544, 927, 3324, 3609
PspGI CCWGG 5 cut(s) 441, 544, 927, 3324, 3609
PspN4I GGNNCC 5 cut(s) 598, 1917, 3330, 3349, 3769
PspPI GGNCC 6 cut(s) 258, 1579, 1705, 1778, 2753, 3136
PsrI GAACNNNNNNTAC 2 cut(s) 1819, 1851
PstI CTGCAG 1 cut(s) 2467
PstNI CAGNNNCTG 1 cut(s) 3395
PsuI RGATCY 4 cut(s) 1259, 1688, 2144, 2453
PsyI GACNNNGTC 1 cut(s) 1703
PvuII CAGCTG 2 cut(s) 1246, 2828
RsaI GTAC 4 cut(s) 191, 649, 715, 1917
RsaNI GTAC 4 cut(s) 190, 648, 714, 1916
RseI CAYNNNNRTG 7 cut(s) 770, 2098, 2555, 2918, 3698, 3765, 3827
SacI GAGCTC 1 cut(s) 723
SapI GCTCTTC 2 cut(s) 522, 3033
SaqAI TTAA 9 cut(s) 305, 404, 1050, 1104, 1232, 2082, 2255, 2726, 2918
Sau96I GGNCC 6 cut(s) 258, 1579, 1705, 1778, 2753, 3136
ScaI AGTACT 1 cut(s) 191
SchI GAGTC 3 cut(s) 980, 1089, 3683
ScrFI CCNGG 7 cut(s) 443, 546, 929, 1913, 1952, 3326, 3611
SduI GDGCHC 5 cut(s) 570, 723, 2425, 2927, 3583
SfaNI GCATC 8 cut(s) 385, 420, 928, 1534, 1828, 2731, 2935, 3525
SfcI CTRYAG 3 cut(s) 601, 1479, 2463
SfuI TTCGAA 1 cut(s) 2341
SinI GGWCC 4 cut(s) 258, 1579, 1705, 1778
SmiMI CAYNNNNRTG 7 cut(s) 770, 2098, 2555, 2918, 3698, 3765, 3827
SmlI CTYRAG 4 cut(s) 569, 1425, 2254, 3146
SmoI CTYRAG 4 cut(s) 569, 1425, 2254, 3146
SpeI ACTAGT 1 cut(s) 3175
SseBI AGGCCT 1 cut(s) 3115
SsiI CCGC 7 cut(s) 499, 623, 970, 1621, 1636, 1771, 3765
SspI AATATT 4 cut(s) 954, 1321, 1974, 3000
SstI GAGCTC 1 cut(s) 723
StuI AGGCCT 1 cut(s) 3115
StyD4I CCNGG 7 cut(s) 441, 544, 927, 1911, 1950, 3324, 3609
StyI CCWWGG 5 cut(s) 1411, 1575, 1919, 2756, 3010
TaaI ACNGT 9 cut(s) 344, 596, 652, 1739, 2182, 2778, 3208, 3391, 3473
TaqI TCGA 3 cut(s) 1035, 2341, 2355
TatI WGTACW 2 cut(s) 189, 713
TauI GCSGC 1 cut(s) 502
TfiI GAWTC 5 cut(s) 541, 864, 2235, 2869, 3142
Tru1I TTAA 9 cut(s) 305, 404, 1050, 1104, 1232, 2082, 2255, 2726, 2918
Tru9I TTAA 9 cut(s) 305, 404, 1050, 1104, 1232, 2082, 2255, 2726, 2918
TseFI GTSAC 4 cut(s) 2037, 3071, 3269, 3303
Tsp45I GTSAC 4 cut(s) 2037, 3071, 3269, 3303
TspGWI ACGGA 3 cut(s) 510, 635, 1236
Tth111I GACNNNGTC 1 cut(s) 1703
Van91I CCANNNNNTGG 1 cut(s) 3245
Vha464I CTTAAG 1 cut(s) 2254
VneI GTGCAC 2 cut(s) 2421, 3579
VpaK11BI GGWCC 4 cut(s) 258, 1579, 1705, 1778
XceI RCATGY 1 cut(s) 3648
XcmI CCANNNNNNNNNTGG 3 cut(s) 178, 1537, 1715
XmaJI CCTAGG 3 cut(s) 1411, 2756, 3010
XmnI GAANNNNTTC 1 cut(s) 2361
ZrmI AGTACT 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.