Multidrug pheromone exporter, MDR family, ABC transporter family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 19 - 293 | 4.3e-39 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 362 - 511 | 3.5e-33 | ABC transporter |
| ABC_membrane | PF00664 | 697 - 968 | 2.5e-45 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1037 - 1186 | 1.2e-32 | ABC transporter |
| SMC_N | PF02463 | 1050 - 1229 | 6e-06 | RecF/RecN/SMC N terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 3419, 3441 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 1079, 1394, 1939 |
| Acc36I | ACCTGC | 1 cut(s) | 1103 |
| Acc65I | GGTACC | 1 cut(s) | 1913 |
| AccB1I | GGYRCC | 2 cut(s) | 1913, 2046 |
| AccI | GTMKAC | 4 cut(s) | 177, 1157, 1943, 2166 |
| AccIII | TCCGGA | 1 cut(s) | 3007 |
| AciI | CCGC | 3 cut(s) | 261, 2801, 2969 |
| AclI | AACGTT | 1 cut(s) | 2717 |
| AclWI | GGATC | 7 cut(s) | 1251, 1493, 1506, 1976, 2999, 3209, 3235 |
| AcoI | YGGCCR | 1 cut(s) | 3399 |
| AcsI | RAATTY | 4 cut(s) | 907, 948, 3361, 3413 |
| AcuI | CTGAAG | 7 cut(s) | 621, 686, 1008, 1036, 1867, 2075, 2430 |
| AcyI | GRCGYC | 1 cut(s) | 2047 |
| AfaI | GTAC | 5 cut(s) | 1858, 1891, 1915, 2124, 3752 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 267, 1199, 1991, 2075, 3192, 3224, 3541 |
| AflII | CTTAAG | 2 cut(s) | 1100, 3110 |
| AflIII | ACRYGT | 4 cut(s) | 447, 1015, 3286, 3623 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2446, 3571 |
| AhlI | ACTAGT | 3 cut(s) | 1529, 2548, 3154 |
| AjnI | CCWGG | 3 cut(s) | 541, 1937, 2175 |
| AleI | CACNNNNGTG | 1 cut(s) | 2071 |
| Alw21I | GWGCWC | 4 cut(s) | 901, 1489, 3063, 3562 |
| Alw26I | GTCTC | 2 cut(s) | 2509, 3265 |
| Alw44I | GTGCAC | 2 cut(s) | 897, 3558 |
| AlwI | GGATC | 7 cut(s) | 1251, 1493, 1506, 1976, 2999, 3209, 3235 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2921 |
| Ama87I | CYCGRG | 1 cut(s) | 3507 |
| Aor13HI | TCCGGA | 1 cut(s) | 3007 |
| AoxI | GGCC | 9 cut(s) | 501, 571, 880, 2877, 2952, 3399, 3481, 3549, 3663 |
| ApaLI | GTGCAC | 2 cut(s) | 897, 3558 |
| ApoI | RAATTY | 4 cut(s) | 907, 948, 3361, 3413 |
| AseI | ATTAAT | 1 cut(s) | 2133 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1287 |
| Asp718I | GGTACC | 1 cut(s) | 1913 |
| AspLEI | GCGC | 3 cut(s) | 158, 2049, 3741 |
| AspS9I | GGNCC | 5 cut(s) | 571, 1744, 2458, 2726, 2952 |
| AsuC2I | CCSGG | 1 cut(s) | 1193 |
| AsuII | TTCGAA | 1 cut(s) | 2346 |
| AsuNHI | GCTAGC | 1 cut(s) | 2401 |
| AvaI | CYCGRG | 1 cut(s) | 3507 |
| AvaII | GGWCC | 3 cut(s) | 1744, 2458, 2726 |
| BaeGI | GKGCMC | 5 cut(s) | 901, 1849, 1955, 3286, 3562 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1905, 1938 |
| BalI | TGGCCA | 1 cut(s) | 3401 |
| BamHI | GGATCC | 1 cut(s) | 1498 |
| BanI | GGYRCC | 2 cut(s) | 1913, 2046 |
| BanII | GRGCYC | 3 cut(s) | 9, 1489, 3063 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1191, 1223 |
| BauI | CACGAG | 1 cut(s) | 2305 |
| BbsI | GAAGAC | 4 cut(s) | 841, 996, 1240, 2013 |
| Bbv12I | GWGCWC | 4 cut(s) | 901, 1489, 3063, 3562 |
| BbvCI | CCTCAGC | 1 cut(s) | 3278 |
| BceAI | ACGGC | 2 cut(s) | 52, 2814 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 380, 414, 1471, 1505 |
| BciT130I | CCWGG | 3 cut(s) | 543, 1939, 2177 |
| BclI | TGATCA | 3 cut(s) | 129, 1576, 3681 |
| BcnI | CCSGG | 1 cut(s) | 1193 |
| BcoDI | GTCTC | 2 cut(s) | 2509, 3265 |
| BcuI | ACTAGT | 3 cut(s) | 1529, 2548, 3154 |
| BfmI | CTRYAG | 2 cut(s) | 2805, 3390 |
| BfoI | RGCGCY | 2 cut(s) | 159, 2050 |
| BfrI | CTTAAG | 2 cut(s) | 1100, 3110 |
| BfuAI | ACCTGC | 1 cut(s) | 1103 |
| BmcAI | AGTACT | 1 cut(s) | 1858 |
| Bme1390I | CCNGG | 4 cut(s) | 543, 1193, 1939, 2177 |
| Bme18I | GGWCC | 3 cut(s) | 1744, 2458, 2726 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2446, 3571 |
| BmeT110I | CYCGRG | 1 cut(s) | 3507 |
| BmgT120I | GGNCC | 5 cut(s) | 571, 1744, 2458, 2726, 2952 |
| BmiI | GGNNCC | 6 cut(s) | 1284, 1500, 1915, 2048, 2953, 3309 |
| BmrFI | CCNGG | 4 cut(s) | 543, 1193, 1939, 2177 |
| BmrI | ACTGGG | 1 cut(s) | 3028 |
| BmsI | GCATC | 7 cut(s) | 45, 382, 1531, 1592, 2084, 2875, 3124 |
| BmtI | GCTAGC | 1 cut(s) | 2405 |
| BmuI | ACTGGG | 1 cut(s) | 3028 |
| BpiI | GAAGAC | 4 cut(s) | 841, 996, 1240, 2013 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1194, 1226, 1476, 1508, 2599, 2631 |
| BpmI | CTGGAG | 4 cut(s) | 525, 1764, 2159, 3047 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1493, 3096, 3278 |
| Bpu14I | TTCGAA | 1 cut(s) | 2346 |
| BpuEI | CTTGAG | 3 cut(s) | 1407, 2362, 3289 |
| BpuMI | CCSGG | 1 cut(s) | 1193 |
| BsaHI | GRCGYC | 1 cut(s) | 2047 |
| BsaJI | CCNNGG | 8 cut(s) | 504, 542, 1808, 1926, 1937, 1947, 3294, 3791 |
| BsaWI | WCCGGW | 1 cut(s) | 3007 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 831, 861, 2014, 2044 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 267, 1199, 1991, 2075, 3192, 3224, 3541 |
| Bse118I | RCCGGY | 2 cut(s) | 857, 3642 |
| Bse1I | ACTGG | 9 cut(s) | 157, 1747, 1897, 2825, 2844, 2955, 3023, 3030, 3781 |
| Bse3DI | GCAATG | 5 cut(s) | 519, 693, 2450, 3633, 3672 |
| BseAI | TCCGGA | 1 cut(s) | 3007 |
| BseBI | CCWGG | 3 cut(s) | 543, 1939, 2177 |
| BseDI | CCNNGG | 8 cut(s) | 504, 542, 1808, 1926, 1937, 1947, 3294, 3791 |
| BseGI | GGATG | 7 cut(s) | 1222, 1354, 1546, 2099, 2262, 3432, 3550 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 267, 1199, 1991, 2075, 3192, 3224, 3541 |
| BseMI | GCAATG | 5 cut(s) | 519, 693, 2450, 3633, 3672 |
| BseMII | CTCAG | 9 cut(s) | 205, 875, 1507, 2988, 3087, 3110, 3139, 3269, 3366 |
| BseNI | ACTGG | 9 cut(s) | 157, 1747, 1897, 2825, 2844, 2955, 3023, 3030, 3781 |
| BseRI | GAGGAG | 6 cut(s) | 376, 1038, 1834, 2022, 3052, 3477 |
| BseSI | GKGCMC | 5 cut(s) | 901, 1849, 1955, 3286, 3562 |
| BseYI | CCCAGC | 1 cut(s) | 1664 |
| BsgI | GTGCAG | 2 cut(s) | 2403, 2561 |
| BshFI | GGCC | 9 cut(s) | 503, 573, 882, 2879, 2954, 3401, 3483, 3551, 3665 |
| BshNI | GGYRCC | 2 cut(s) | 1913, 2046 |
| BsiHKAI | GWGCWC | 4 cut(s) | 901, 1489, 3063, 3562 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3507 |
| BsiSI | CCGG | 6 cut(s) | 609, 858, 1109, 1193, 3008, 3643 |
| BslFI | GGGAC | 7 cut(s) | 79, 820, 1945, 2091, 2182, 3036, 3129 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 267, 1199, 1991, 2075, 3192, 3224, 3541 |
| BsmAI | GTCTC | 2 cut(s) | 2509, 3265 |
| BsmFI | GGGAC | 7 cut(s) | 79, 820, 1945, 2091, 2182, 3036, 3129 |
| BsmI | GAATGC | 1 cut(s) | 2068 |
| BsnI | GGCC | 9 cut(s) | 503, 573, 882, 2879, 2954, 3401, 3483, 3551, 3665 |
| BsoBI | CYCGRG | 1 cut(s) | 3507 |
| Bsp119I | TTCGAA | 1 cut(s) | 2346 |
| Bsp1286I | GDGCHC | 8 cut(s) | 9, 901, 1489, 1849, 1955, 3063, 3286, 3562 |
| Bsp13I | TCCGGA | 1 cut(s) | 3007 |
| Bsp19I | CCATGG | 2 cut(s) | 1926, 1947 |
| BspACI | CCGC | 3 cut(s) | 261, 2801, 2969 |
| BspANI | GGCC | 9 cut(s) | 503, 573, 882, 2879, 2954, 3401, 3483, 3551, 3665 |
| BspCNI | CTCAG | 9 cut(s) | 204, 876, 1506, 2989, 3088, 3111, 3138, 3270, 3367 |
| BspEI | TCCGGA | 1 cut(s) | 3007 |
| BspHI | TCATGA | 2 cut(s) | 105, 3409 |
| BspLI | GGNNCC | 6 cut(s) | 1284, 1500, 1915, 2048, 2953, 3309 |
| BspMAI | CTGCAG | 1 cut(s) | 3394 |
| BspMI | ACCTGC | 1 cut(s) | 1103 |
| BspOI | GCTAGC | 1 cut(s) | 2405 |
| BspPI | GGATC | 7 cut(s) | 1251, 1493, 1506, 1976, 2999, 3209, 3235 |
| BspQI | GCTCTTC | 1 cut(s) | 358 |
| BspT104I | TTCGAA | 1 cut(s) | 2346 |
| BspT107I | GGYRCC | 2 cut(s) | 1913, 2046 |
| BspTI | CTTAAG | 2 cut(s) | 1100, 3110 |
| BsrDI | GCAATG | 5 cut(s) | 519, 693, 2450, 3633, 3672 |
| BsrFI | RCCGGY | 2 cut(s) | 857, 3642 |
| BsrI | ACTGG | 9 cut(s) | 157, 1747, 1897, 2825, 2844, 2955, 3023, 3030, 3781 |
| BssAI | RCCGGY | 2 cut(s) | 857, 3642 |
| BssECI | CCNNGG | 8 cut(s) | 504, 542, 1808, 1926, 1937, 1947, 3294, 3791 |
| BssNI | GRCGYC | 1 cut(s) | 2047 |
| BssSI | CACGAG | 1 cut(s) | 2305 |
| BssT1I | CCWWGG | 5 cut(s) | 504, 1926, 1947, 3294, 3791 |
| Bst2BI | CACGAG | 1 cut(s) | 2305 |
| Bst2UI | CCWGG | 3 cut(s) | 543, 1939, 2177 |
| Bst4CI | ACNGT | 9 cut(s) | 649, 709, 968, 1449, 1548, 2144, 2494, 3148, 3452 |
| Bst6I | CTCTTC | 3 cut(s) | 358, 2582, 2686 |
| BstACI | GRCGYC | 1 cut(s) | 2047 |
| BstAFI | CTTAAG | 2 cut(s) | 1100, 3110 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 935, 1532, 1541 |
| BstBI | TTCGAA | 1 cut(s) | 2346 |
| BstC8I | GCNNGC | 6 cut(s) | 349, 1955, 2051, 2403, 2770, 3139 |
| BstDSI | CCRYGG | 2 cut(s) | 1926, 1947 |
| BstF5I | GGATG | 7 cut(s) | 1222, 1354, 1546, 2099, 2262, 3432, 3550 |
| BstH2I | RGCGCY | 2 cut(s) | 159, 2050 |
| BstHHI | GCGC | 3 cut(s) | 158, 2049, 3741 |
| BstMAI | GTCTC | 2 cut(s) | 2509, 3265 |
| BstNI | CCWGG | 3 cut(s) | 543, 1939, 2177 |
| BstNSI | RCATGY | 7 cut(s) | 22, 451, 848, 1019, 1226, 3290, 3627 |
| BstSCI | CCNGG | 4 cut(s) | 541, 1191, 1937, 2175 |
| BstSFI | CTRYAG | 2 cut(s) | 2805, 3390 |
| BstSLI | GKGCMC | 5 cut(s) | 901, 1849, 1955, 3286, 3562 |
| BstV2I | GAAGAC | 4 cut(s) | 841, 996, 1240, 2013 |
| BstX2I | RGATCY | 2 cut(s) | 1256, 1498 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 347, 1451, 1909 |
| BstYI | RGATCY | 2 cut(s) | 1256, 1498 |
| BsuRI | GGCC | 9 cut(s) | 503, 573, 882, 2879, 2954, 3401, 3483, 3551, 3665 |
| BtgI | CCRYGG | 2 cut(s) | 1926, 1947 |
| BtsCI | GGATG | 7 cut(s) | 1222, 1354, 1546, 2099, 2262, 3432, 3550 |
| BtsI | GCAGTG | 2 cut(s) | 2544, 2898 |
| BtsIMutI | CAGTG | 7 cut(s) | 150, 1891, 2406, 2544, 2898, 2962, 3758 |
| BveI | ACCTGC | 1 cut(s) | 1103 |
| Cac8I | GCNNGC | 6 cut(s) | 349, 1955, 2051, 2403, 2770, 3139 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2921 |
| CciI | TCATGA | 2 cut(s) | 105, 3409 |
| CfoI | GCGC | 3 cut(s) | 158, 2049, 3741 |
| Cfr10I | RCCGGY | 2 cut(s) | 857, 3642 |
| Cfr13I | GGNCC | 5 cut(s) | 571, 1744, 2458, 2726, 2952 |
| Csp6I | GTAC | 5 cut(s) | 1857, 1890, 1914, 2123, 3751 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3172, 3207 |
| CviQI | GTAC | 5 cut(s) | 1857, 1890, 1914, 2123, 3751 |
| DinI | GGCGCC | 1 cut(s) | 2048 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 1079, 1394, 1939 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2446, 3571 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 1079, 1394, 1939 |
| EaeI | YGGCCR | 1 cut(s) | 3399 |
| Eam1104I | CTCTTC | 3 cut(s) | 358, 2582, 2686 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2446, 3571 |
| EarI | CTCTTC | 3 cut(s) | 358, 2582, 2686 |
| Ecl136II | GAGCTC | 2 cut(s) | 1487, 3061 |
| Eco130I | CCWWGG | 5 cut(s) | 504, 1926, 1947, 3294, 3791 |
| Eco147I | AGGCCT | 2 cut(s) | 882, 2879 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 1489, 3063 |
| Eco47I | GGWCC | 3 cut(s) | 1744, 2458, 2726 |
| Eco53kI | GAGCTC | 2 cut(s) | 1487, 3061 |
| Eco57I | CTGAAG | 7 cut(s) | 621, 686, 1008, 1036, 1867, 2075, 2430 |
| Eco88I | CYCGRG | 1 cut(s) | 3507 |
| EcoICRI | GAGCTC | 2 cut(s) | 1487, 3061 |
| EcoRI | GAATTC | 2 cut(s) | 948, 3361 |
| EcoRII | CCWGG | 3 cut(s) | 541, 1937, 2175 |
| EcoT14I | CCWWGG | 5 cut(s) | 504, 1926, 1947, 3294, 3791 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 1489, 3063 |
| EgeI | GGCGCC | 1 cut(s) | 2048 |
| EheI | GGCGCC | 1 cut(s) | 2048 |
| ErhI | CCWWGG | 5 cut(s) | 504, 1926, 1947, 3294, 3791 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2073, 2105, 2917, 2949 |
| FaqI | GGGAC | 7 cut(s) | 79, 820, 1945, 2091, 2182, 3036, 3129 |
| FauNDI | CATATG | 3 cut(s) | 139, 658, 1798 |
| FbaI | TGATCA | 3 cut(s) | 129, 1576, 3681 |
| FblI | GTMKAC | 4 cut(s) | 177, 1157, 1943, 2166 |
| FokI | GGATG | 7 cut(s) | 1229, 1361, 1553, 2106, 2249, 3439, 3557 |
| FriOI | GRGCYC | 3 cut(s) | 9, 1489, 3063 |
| GlaI | GCGC | 3 cut(s) | 157, 2048, 3740 |
| GsaI | CCCAGC | 1 cut(s) | 1668 |
| GsuI | CTGGAG | 4 cut(s) | 525, 1764, 2159, 3047 |
| HaeII | RGCGCY | 2 cut(s) | 159, 2050 |
| HaeIII | GGCC | 9 cut(s) | 503, 573, 882, 2879, 2954, 3401, 3483, 3551, 3665 |
| HapII | CCGG | 6 cut(s) | 609, 858, 1109, 1193, 3008, 3643 |
| HhaI | GCGC | 3 cut(s) | 158, 2049, 3741 |
| Hin1I | GRCGYC | 1 cut(s) | 2047 |
| Hin6I | GCGC | 3 cut(s) | 156, 2047, 3739 |
| HinP1I | GCGC | 3 cut(s) | 156, 2047, 3739 |
| HincII | GTYRAC | 4 cut(s) | 453, 1158, 1626, 2301 |
| HindII | GTYRAC | 4 cut(s) | 453, 1158, 1626, 2301 |
| HpaII | CCGG | 6 cut(s) | 609, 858, 1109, 1193, 3008, 3643 |
| Hpy99I | CGWCG | 1 cut(s) | 782 |
| HpyCH4III | ACNGT | 9 cut(s) | 649, 709, 968, 1449, 1548, 2144, 2494, 3148, 3452 |
| HpyCH4IV | ACGT | 3 cut(s) | 777, 2342, 2717 |
| HpySE526I | ACGT | 3 cut(s) | 777, 2342, 2717 |
| Hsp92I | GRCGYC | 1 cut(s) | 2047 |
| HspAI | GCGC | 3 cut(s) | 156, 2047, 3739 |
| KasI | GGCGCC | 1 cut(s) | 2046 |
| Kpn2I | TCCGGA | 1 cut(s) | 3007 |
| KpnI | GGTACC | 1 cut(s) | 1917 |
| Ksp22I | TGATCA | 3 cut(s) | 129, 1576, 3681 |
| LguI | GCTCTTC | 1 cut(s) | 358 |
| LmnI | GCTCC | 6 cut(s) | 544, 1337, 1783, 2559, 2786, 3746 |
| LweI | GCATC | 7 cut(s) | 45, 382, 1531, 1592, 2084, 2875, 3124 |
| MaeII | ACGT | 3 cut(s) | 777, 2342, 2717 |
| MaeIII | GTNAC | 6 cut(s) | 709, 817, 1011, 1055, 1401, 2438 |
| MfeI | CAATTG | 2 cut(s) | 1572, 2633 |
| MflI | RGATCY | 2 cut(s) | 1256, 1498 |
| MhlI | GDGCHC | 8 cut(s) | 9, 901, 1489, 1849, 1955, 3063, 3286, 3562 |
| MlsI | TGGCCA | 1 cut(s) | 3401 |
| MluNI | TGGCCA | 1 cut(s) | 3401 |
| Mly113I | GGCGCC | 1 cut(s) | 2047 |
| MlyI | GAGTC | 2 cut(s) | 61, 2217 |
| MmeI | TCCRAC | 5 cut(s) | 199, 230, 1468, 2290, 3110 |
| Mox20I | TGGCCA | 1 cut(s) | 3401 |
| MroI | TCCGGA | 1 cut(s) | 3007 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1287 |
| MscI | TGGCCA | 1 cut(s) | 3401 |
| MslI | CAYNNNNRTG | 4 cut(s) | 490, 1907, 2071, 3677 |
| Msp20I | TGGCCA | 1 cut(s) | 3401 |
| MspCI | CTTAAG | 2 cut(s) | 1100, 3110 |
| MspI | CCGG | 6 cut(s) | 609, 858, 1109, 1193, 3008, 3643 |
| MspR9I | CCNGG | 4 cut(s) | 543, 1193, 1939, 2177 |
| MunI | CAATTG | 2 cut(s) | 1572, 2633 |
| Mva1269I | GAATGC | 1 cut(s) | 2068 |
| MvaI | CCWGG | 3 cut(s) | 543, 1939, 2177 |
| NarI | GGCGCC | 1 cut(s) | 2047 |
| NciI | CCSGG | 1 cut(s) | 1193 |
| NcoI | CCATGG | 2 cut(s) | 1926, 1947 |
| NdeI | CATATG | 3 cut(s) | 139, 658, 1798 |
| NheI | GCTAGC | 1 cut(s) | 2401 |
| NlaIV | GGNNCC | 6 cut(s) | 1284, 1500, 1915, 2048, 2953, 3309 |
| NmeAIII | GCCGAG | 1 cut(s) | 1789 |
| NmuCI | GTSAC | 2 cut(s) | 1011, 2438 |
| NspI | RCATGY | 7 cut(s) | 22, 451, 848, 1019, 1226, 3290, 3627 |
| NspV | TTCGAA | 1 cut(s) | 2346 |
| OliI | CACNNNNGTG | 1 cut(s) | 2071 |
| PagI | TCATGA | 2 cut(s) | 105, 3409 |
| PceI | AGGCCT | 2 cut(s) | 882, 2879 |
| PciI | ACATGT | 4 cut(s) | 447, 1015, 3286, 3623 |
| PciSI | GCTCTTC | 1 cut(s) | 358 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1961 |
| PctI | GAATGC | 1 cut(s) | 2068 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1287 |
| PfoI | TCCNGGA | 1 cut(s) | 2175 |
| PleI | GAGTC | 2 cut(s) | 61, 2216 |
| PluTI | GGCGCC | 1 cut(s) | 2050 |
| PpsI | GAGTC | 2 cut(s) | 61, 2216 |
| PscI | ACATGT | 4 cut(s) | 447, 1015, 3286, 3623 |
| PshBI | ATTAAT | 1 cut(s) | 2133 |
| PsiI | TTATAA | 2 cut(s) | 3419, 3441 |
| Psp124BI | GAGCTC | 2 cut(s) | 1489, 3063 |
| Psp1406I | AACGTT | 1 cut(s) | 2717 |
| Psp6I | CCWGG | 3 cut(s) | 541, 1937, 2175 |
| PspFI | CCCAGC | 1 cut(s) | 1664 |
| PspGI | CCWGG | 3 cut(s) | 541, 1937, 2175 |
| PspN4I | GGNNCC | 6 cut(s) | 1284, 1500, 1915, 2048, 2953, 3309 |
| PspPI | GGNCC | 5 cut(s) | 571, 1744, 2458, 2726, 2952 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2406, 2438 |
| PstI | CTGCAG | 1 cut(s) | 3394 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2921 |
| PsuI | RGATCY | 2 cut(s) | 1256, 1498 |
| RsaI | GTAC | 5 cut(s) | 1858, 1891, 1915, 2124, 3752 |
| RsaNI | GTAC | 5 cut(s) | 1857, 1890, 1914, 2123, 3751 |
| RseI | CAYNNNNRTG | 4 cut(s) | 490, 1907, 2071, 3677 |
| SacI | GAGCTC | 2 cut(s) | 1489, 3063 |
| SalI | GTCGAC | 1 cut(s) | 1156 |
| SapI | GCTCTTC | 1 cut(s) | 358 |
| Sau96I | GGNCC | 5 cut(s) | 571, 1744, 2458, 2726, 2952 |
| ScaI | AGTACT | 1 cut(s) | 1858 |
| SchI | GAGTC | 2 cut(s) | 61, 2217 |
| ScrFI | CCNGG | 4 cut(s) | 543, 1193, 1939, 2177 |
| SduI | GDGCHC | 8 cut(s) | 9, 901, 1489, 1849, 1955, 3063, 3286, 3562 |
| SfaNI | GCATC | 7 cut(s) | 45, 382, 1531, 1592, 2084, 2875, 3124 |
| SfcI | CTRYAG | 2 cut(s) | 2805, 3390 |
| SfoI | GGCGCC | 1 cut(s) | 2048 |
| SfuI | TTCGAA | 1 cut(s) | 2346 |
| SinI | GGWCC | 3 cut(s) | 1744, 2458, 2726 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 490, 1907, 2071, 3677 |
| SmlI | CTYRAG | 5 cut(s) | 1100, 1422, 2377, 3110, 3268 |
| SmoI | CTYRAG | 5 cut(s) | 1100, 1422, 2377, 3110, 3268 |
| SpeI | ACTAGT | 3 cut(s) | 1529, 2548, 3154 |
| SseBI | AGGCCT | 2 cut(s) | 882, 2879 |
| SsiI | CCGC | 3 cut(s) | 261, 2801, 2969 |
| SspDI | GGCGCC | 1 cut(s) | 2046 |
| SstI | GAGCTC | 2 cut(s) | 1489, 3063 |
| StuI | AGGCCT | 2 cut(s) | 882, 2879 |
| StyD4I | CCNGG | 4 cut(s) | 541, 1191, 1937, 2175 |
| StyI | CCWWGG | 5 cut(s) | 504, 1926, 1947, 3294, 3791 |
| TaaI | ACNGT | 9 cut(s) | 649, 709, 968, 1449, 1548, 2144, 2494, 3148, 3452 |
| TaiI | ACGT | 3 cut(s) | 780, 2345, 2720 |
| TaqI | TCGA | 5 cut(s) | 278, 1157, 1176, 2346, 2425 |
| TatI | WGTACW | 2 cut(s) | 1856, 2122 |
| TauI | GCSGC | 1 cut(s) | 2804 |
| TscAI | CASTG | 7 cut(s) | 157, 1891, 2413, 2544, 2905, 2962, 3765 |
| TseFI | GTSAC | 2 cut(s) | 1011, 2438 |
| Tsp45I | GTSAC | 2 cut(s) | 1011, 2438 |
| TspGWI | ACGGA | 2 cut(s) | 3323, 3759 |
| TspRI | CASTG | 7 cut(s) | 157, 1891, 2413, 2544, 2905, 2962, 3765 |
| Vha464I | CTTAAG | 2 cut(s) | 1100, 3110 |
| VneI | GTGCAC | 2 cut(s) | 897, 3558 |
| VpaK11BI | GGWCC | 3 cut(s) | 1744, 2458, 2726 |
| VspI | ATTAAT | 1 cut(s) | 2133 |
| XapI | RAATTY | 4 cut(s) | 907, 948, 3361, 3413 |
| XceI | RCATGY | 7 cut(s) | 22, 451, 848, 1019, 1226, 3290, 3627 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1451, 1945 |
| XmiI | GTMKAC | 4 cut(s) | 177, 1157, 1943, 2166 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1287 |
| ZrmI | AGTACT | 1 cut(s) | 1858 |