Prupe.7G220300_v2.0.a1

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000317
Physical Location & Seq
Forward (+)
19744344 .. 19750339
5996 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G220300.1

Sequence Viewer

Length: 3774 bp
ATGAGCAAAATGGAATCTCCTGAGAAGAATGAGATATTGGCAGTGAAGGAGAAAGGATCAGATGAACGCAGCAGCCATGGAAGTAAAGGAAGAAATTCTGTGGTGAAGATTTTCAGATATGCTGATTGGGTGGATGTGGTGCTGATGGTTTTGGGGACAGTTGGAGCAGTAGGAGATGGGATGTCGACAAATTGCTTGCTGGTGTTCGTTAGCCGTCTTATGAATAACTTGGGATATGGTCAGAGCCAACAGAACAATAATCATGGGATCCATTGGATGCACGAGGTTGAAAAGTGCAGCTTAGACTTTGTCTACTTGGGATTAGCAGTAATGCTGGTGGCTTTTTTGGAAGGTTATTGTTGGAGCAAAACTAGTGAGAGGCAGGTGCTGAAGATTCGTTACAAGTACTTGAAAGCAGTTTTGAGACAAGAAGTTGGGTTTTTCGATTCCCAAGAAGCCACTACTTCGGAGGTCATCAATACCATATCAAAAGATACTTCTCTCATACAAGAAGTTCTAAGTGAAAAGGTGCCAACATTTGTTATGCACTCATCAGTGTTCGTCTCGGGGCTGGCCTTCTCCACATACTTGTCATGGAGACTGGCCTTGGTAGCATTTCCAACACTACTTCTCCTAATAATACCAGGAATGATCTATGGGAAATACCTCATGTACTTGTCGAAAAAATCATACAAAGAGTATGGGAAAGCAAACAGCATAGTAGAGCAAGCTCTAAGCTCCATAAAAACTGTTTATGCATTCACTGCCGAGAGGAGAATTGTGGAAAGATATTCAGCAATATTGGAGAGAACAAGTAGGCTGGGGATGAAGCAAGGCATAGCAAAAGGTCTGGCAGTGGGAAGCACAGGGCTGTCTTTTGCGATATGGGGGTTTCTGGCATGGTATGGAAGCCATTTGGTGATGTATAAAGGTGAAAGCGGTGGGAGGATTTATGCGGCTGGGATCTCTTTCGTATTGAGTGGACTATCCCTGGGAATGGCACTTCCGGATTTGAGGTACTTCACAGAAGCTGCGGTTGCTGCTACACGAATATTCGACCGGATAGACCGTAGGCCCTTGATCGACGGTGAAGACACCCAAGGACTTGTCTTAGACAACATTAGAGGCGAACTAGAATTCATTGGTGTCAAGTTCACATACCCTTCTCGTCCAGATTCCATGGTCCTCGGAGATTTCAATCTGAAGGTTGAAGCAGGGAAGACCATTGCTCTTGTTGGTGCGAGTGGAAGTGGCAAGTCCACAGCAATTGCATTGGTGCAACGTTTTTATGATGCGGATGATGGGGTTGTTCGGATCGACGGTGTCGATATAAGGACACTTCAGCTGAAATGGATTAGATCAAAAATGGGACTTGTTAGTCAAGAACATGCCTTGTTTGGGACTTCAATTAAGGAGAACATTATGTTTGGTAAGCTTGATGCCAGTATGGATGAAGTCACAGCTGCAGCTATGGCTGCCAATGCTCATAATTTCATAAGGCAACTTCCACAAGGGTATGAGACCAAGATTGGAGAGAGAGGAGCACTTTTGTCTGGTGGACAAAAGCAGCGGATAGCTATTGCCAGAGCAATTATCAAGAACCCTGTAATTCTACTACTTGATGAAGCAACAAGCGCTCTTGACTCTGAATCTGAGACTCTGGTCCAAAATGCTCTTGATCAAGCCTCCATGGGGAGAACCACCTTGGTTGTTGCCCACAAGCTTTCAACTGTTCGAAATGCAGACCTAATTGCGGTGGTCAGTGGCGGTTGCATCATCGAAATAGGCTCACACAACCAACTCATCAACTGCCAAAACGGTCACTATGCAAAACTAGCAAAGCTACAGAGACAATTCAGCTGTGACAATGTTGACCAAGAACGAATTTCAGTGTCTTCGGTCACAAGAAGCAGTGCTGGCAGGCTAAGCACAGCAAGATCAAGCCCTGCATCAACGTTTGCAAAATCACCGCTTCCCCTCGAGACCTCACAGCCTTTGTCACACCCTCCAACTTCCTTCTACCGCCTTCTGTCTTTGAATTCCCCTGAATGGAAGCAAGGCCTAATTGGAAGCCTCTCTGCCATAGCATTCGGGTCAGTCCAACCTGTCTATGCCTTAACCATAGGTGGCATGATATCAGCCTTCTTTGTGCAAAGCCACGAGGAAATGCGTGCTCGAATTCGTACATATTCCTTGATTTTCTCTGCACTTTCTGTAATCTCCATCACCTTGAATCTCTTGCAACACTACAACTTTGCTTACATGGGTGAGCAGCTCACAAAAAGAATCCGGTTGCAAATGCTTCAGAAGATCTTGACCTTTGAAACAGCTTGGTTTGATGAGGAGCAGAATTCAAGTGGGGCATTGTGTTCAAGATTGAGCAATGAGGCTTCCATGGTTAAGTCCCTTGTGGCAGACAGGGTGTCCTTATTAGTCCAAACCACTTCAGCTGTCACAATTGCCATGATCATGGGGCTAGTTGTGGCTTGGAAGCTAGCACTCGTTATGATCGCGGTCCAACCACTCGCAATCCTATGCTTCTACACAAAGAAAGTTTTGCTGTCTAGCCTATCAGCCAACTTTATCAAAGCACAAAACCATAGCACTCAAATTGCAGTTGAAGCAGTGTACAATCATAGAATTGTGACTTCATTTGGAAGTGTGGGAAAAGTACTTGAATTATTCGATGAGGCTCAGGAAGCGCCGAGGAAAGAGGCAAGGAAGAAGTCATGGCTAGCTGGGCTTGGGATGGGGTCAGCCCAGTGTCTAACATTTATGTCATGGGCACTGGACTTCTGGTATGGTGGTACACTAGTAGAAAAGGGGCAAATATCAGCTGGGGATGTGTTCAAAACATTTTTCATATTGGTGAGCACTGGTAAGGTTATAGCTGAAGCTGGGAGTATGACTTCTGATTTAGCCAAGGGTTCAACAGCAGTTGCATCTGTGTTTGAGATTCTCGACCGCCACTCACTAATTCCAGGCTCTCGTAATGTGGGGGATGAAGATGGTTCTAGTGGGAATGGGATAAAGTTAGAGAAAGTAACTGGGAGCATAGAACTGAAGAAGGTTGATTTTGCATACCCAAGTAGGCCAGAGACATTGGTGTTGCGCCAATTTAGCTTGGAGGTGAAGCCAGGCACAAGCATTGGACTTGTTGGGAAAAGTGGGTGTGGCAAGTCAACCGTGGTTGGATTGATACAAAGATTTTACGATGCAGAGAGTGGGTCAGTGAAGGTGGATGGTGTGGACATAAGGGAACTAGATGTTCAATGGTATAGGAGGCACACAGCCCTTGTTAGCCAAGAGCCCGTGATATATTCCGGTACCATTCGCGACAACATCATGTTTGGGAAGCTTGATGCCCCAGAGGATGAAGTTGTAAAGGCCGCCAGAGCAGCCAATGCCCACGAATTTATCTCGTCATTGAAGGACGGTTATAATACAGAGTGTGGTGAAAGAGGGGTGCAGTTATCAGGAGGGCAAAAGCAAAGAATAGCAATTGCAAGAGCAATACTTAGAAACCCAACAATACTATTGCTAGATGAGGCAACAAGTGCACTTGATGTGCAATCTGAGCACCTTGTGCAAGAAGCTTTGGACCGCATTATGGTGGGAAGGACAACAGTTGTGATAGCACATAGGCTTAACACCATCAAAAACCTTGAAATGATAGCATTTGTTGCAGATGGGAAGGTGGTGGAGAAAGGCACATATGCTCAGCTCAAGCACAAGCGTGGTGCCTTCTTTAACCTTGCCACCTGTCAAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1258

Amino Acids

137.56

Weight (kDa)

8.94

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3441
AarI CACCTGC 1 cut(s) 373
AasI GACNNNNNNGTC 1 cut(s) 1377
Acc36I ACCTGC 1 cut(s) 373
Acc65I GGTACC 1 cut(s) 3326
AccB1I GGYRCC 3 cut(s) 529, 3326, 3740
AccI GTMKAC 2 cut(s) 185, 312
AccII CGCG 2 cut(s) 2513, 3336
AccIII TCCGGA 1 cut(s) 1006
AclI AACGTT 2 cut(s) 1282, 1955
AclWI GGATC 5 cut(s) 64, 262, 275, 971, 1322
AcsI RAATTY 7 cut(s) 94, 1136, 1884, 2038, 2178, 2350, 3413
AcuI CTGAAG 7 cut(s) 410, 1223, 1325, 2288, 2430, 2913, 3083
AdeI CACNNNGTG 1 cut(s) 3586
AfaI GTAC 8 cut(s) 407, 674, 1019, 2185, 2630, 2673, 2809, 3328
AfeI AGCGCT 1 cut(s) 1636
AfiI CCNNNNNNNGG 6 cut(s) 997, 1398, 1692, 1753, 2049, 3610
AhdI GACNNNNNGTC 1 cut(s) 2422
AhlI ACTAGT 2 cut(s) 371, 2812
AjnI CCWGG 4 cut(s) 643, 990, 2980, 3136
AjuI GAANNNNNNNTTGG 2 cut(s) 20, 52
AleI CACNNNNGTG 1 cut(s) 3735
Alw21I GWGCWC 5 cut(s) 1546, 2176, 2876, 3562, 3582
Alw26I GTCTC 8 cut(s) 418, 568, 592, 1514, 1649, 1843, 1976, 3092
Alw44I GTGCAC 1 cut(s) 3558
AlwI GGATC 5 cut(s) 64, 262, 275, 971, 1322
AlwNI CAGNNNCTG 2 cut(s) 388, 1031
Ama87I CYCGRG 2 cut(s) 565, 1979
Aor13HI TCCGGA 1 cut(s) 1006
Aor51HI AGCGCT 1 cut(s) 1636
AoxI GGCC 6 cut(s) 573, 603, 1073, 2059, 3092, 3387
ApaLI GTGCAC 1 cut(s) 3558
ApoI RAATTY 7 cut(s) 94, 1136, 1884, 2038, 2178, 2350, 3413
Asp700I GAANNNNTTC 2 cut(s) 94, 110
Asp718I GGTACC 1 cut(s) 3326
AspLEI GCGC 3 cut(s) 1637, 2704, 3114
AspS9I GGNCC 5 cut(s) 1074, 1183, 1663, 2515, 3601
AsuII TTCGAA 1 cut(s) 1735
AsuNHI GCTAGC 2 cut(s) 2494, 2734
AvaI CYCGRG 2 cut(s) 565, 1979
AvaII GGWCC 4 cut(s) 1183, 1663, 2515, 3601
BaeGI GKGCMC 2 cut(s) 2788, 3562
BaeI ACNNNNGTAYC 2 cut(s) 2799, 2832
BamHI GGATCC 1 cut(s) 267
BanI GGYRCC 3 cut(s) 529, 3326, 3740
BanII GRGCYC 1 cut(s) 3312
BarI GAAGNNNNNNTAC 2 cut(s) 383, 415
BauI CACGAG 2 cut(s) 281, 2159
BbsI GAAGAC 3 cut(s) 1098, 1226, 1887
Bbv12I GWGCWC 5 cut(s) 1546, 2176, 2876, 3562, 3582
BccI CCATC 9 cut(s) 139, 170, 1295, 2231, 2743, 3002, 3236, 3662, 3683
BceAI ACGGC 1 cut(s) 198
BciT130I CCWGG 4 cut(s) 645, 992, 2982, 3138
BclI TGATCA 2 cut(s) 1678, 2466
BcoDI GTCTC 8 cut(s) 418, 568, 592, 1514, 1649, 1843, 1976, 3092
BcuI ACTAGT 2 cut(s) 371, 2812
BfmI CTRYAG 2 cut(s) 1464, 1844
BfoI RGCGCY 2 cut(s) 1638, 2705
BfuAI ACCTGC 1 cut(s) 373
BglII AGATCT 1 cut(s) 2310
BlpI GCTNAGC 2 cut(s) 1925, 3720
BmcAI AGTACT 2 cut(s) 407, 2673
Bme1390I CCNGG 4 cut(s) 645, 992, 2982, 3138
Bme18I GGWCC 4 cut(s) 1183, 1663, 2515, 3601
BmeRI GACNNNNNGTC 1 cut(s) 2422
BmeT110I CYCGRG 2 cut(s) 565, 1979
BmgT120I GGNCC 5 cut(s) 1074, 1183, 1663, 2515, 3601
BmiI GGNNCC 4 cut(s) 269, 531, 3328, 3742
BmrFI CCNGG 4 cut(s) 645, 992, 2982, 3138
BmrI ACTGGG 2 cut(s) 2755, 3057
BmsI GCATC 8 cut(s) 267, 1282, 1429, 1782, 1958, 2951, 3205, 3352
BmtI GCTAGC 2 cut(s) 2498, 2738
BmuI ACTGGG 2 cut(s) 2755, 3057
BoxI GACNNNNGTC 1 cut(s) 1661
BpiI GAAGAC 3 cut(s) 1098, 1226, 1887
Bpu10I CCTNAGC 1 cut(s) 2694
Bpu1102I GCTNAGC 2 cut(s) 1925, 3720
Bpu14I TTCGAA 1 cut(s) 1735
BpuEI CTTGAG 1 cut(s) 3710
BsaBI GATNNNNATC 1 cut(s) 1197
BsaI GGTCTC 2 cut(s) 1514, 1976
BsaWI WCCGGW 4 cut(s) 1006, 1059, 2289, 3323
BsaXI ACNNNNNCTCC 2 cut(s) 615, 645
Bsc4I CCNNNNNNNGG 6 cut(s) 997, 1398, 1692, 1753, 2049, 3610
Bse1I ACTGG 6 cut(s) 606, 1443, 2761, 2793, 2881, 3052
Bse3DI GCAATG 2 cut(s) 1224, 2389
Bse8I GATNNNNATC 1 cut(s) 1197
BseAI TCCGGA 1 cut(s) 1006
BseBI CCWGG 4 cut(s) 645, 992, 2982, 3138
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 6 cut(s) 997, 1398, 1692, 1753, 2049, 3610
BseMI GCAATG 2 cut(s) 1224, 2389
BseMII CTCAG 5 cut(s) 12, 1644, 2708, 3567, 3734
BseNI ACTGG 6 cut(s) 606, 1443, 2761, 2793, 2881, 3052
BseRI GAGGAG 3 cut(s) 787, 1554, 2357
BseSI GKGCMC 2 cut(s) 2788, 3562
BseYI CCCAGC 5 cut(s) 820, 959, 2738, 2837, 2897
BsgI GTGCAG 3 cut(s) 316, 2190, 3488
Bsh1236I CGCG 2 cut(s) 2513, 3336
Bsh1285I CGRYCG 2 cut(s) 1060, 2965
BshFI GGCC 6 cut(s) 575, 605, 1075, 2061, 3094, 3389
BshNI GGYRCC 3 cut(s) 529, 3326, 3740
BsiEI CGRYCG 2 cut(s) 1060, 2965
BsiHKAI GWGCWC 5 cut(s) 1546, 2176, 2876, 3562, 3582
BsiHKCI CYCGRG 2 cut(s) 565, 1979
BsiSI CCGG 4 cut(s) 1007, 1060, 2290, 3324
BslFI GGGAC 4 cut(s) 169, 1383, 1414, 2389
BslI CCNNNNNNNGG 6 cut(s) 997, 1398, 1692, 1753, 2049, 3610
BsmAI GTCTC 8 cut(s) 418, 568, 592, 1514, 1649, 1843, 1976, 3092
BsmBI CGTCTC 1 cut(s) 568
BsmFI GGGAC 4 cut(s) 169, 1383, 1414, 2389
BsmI GAATGC 2 cut(s) 758, 2087
BsnI GGCC 6 cut(s) 575, 605, 1075, 2061, 3094, 3389
Bso31I GGTCTC 2 cut(s) 1514, 1976
BsoBI CYCGRG 2 cut(s) 565, 1979
Bsp119I TTCGAA 1 cut(s) 1735
Bsp1286I GDGCHC 7 cut(s) 1546, 2176, 2788, 2876, 3312, 3562, 3582
Bsp13I TCCGGA 1 cut(s) 1006
Bsp1407I TGTACA 1 cut(s) 2628
Bsp1720I GCTNAGC 2 cut(s) 1925, 3720
Bsp19I CCATGG 4 cut(s) 76, 1179, 1689, 2394
Bsp68I TCGCGA 1 cut(s) 3336
BspANI GGCC 6 cut(s) 575, 605, 1075, 2061, 3094, 3389
BspCNI CTCAG 5 cut(s) 13, 1645, 2707, 3568, 3733
BspEI TCCGGA 1 cut(s) 1006
BspFNI CGCG 2 cut(s) 2513, 3336
BspLI GGNNCC 4 cut(s) 269, 531, 3328, 3742
BspMAI CTGCAG 1 cut(s) 1468
BspMI ACCTGC 1 cut(s) 373
BspOI GCTAGC 2 cut(s) 2498, 2738
BspPI GGATC 5 cut(s) 64, 262, 275, 971, 1322
BspT104I TTCGAA 1 cut(s) 1735
BspT107I GGYRCC 3 cut(s) 529, 3326, 3740
BspTNI GGTCTC 2 cut(s) 1514, 1976
BsrDI GCAATG 2 cut(s) 1224, 2389
BsrGI TGTACA 1 cut(s) 2628
BsrI ACTGG 6 cut(s) 606, 1443, 2761, 2793, 2881, 3052
BssSI CACGAG 2 cut(s) 281, 2159
BssT1I CCWWGG 8 cut(s) 76, 606, 1099, 1179, 1689, 1704, 2394, 2922
Bst2BI CACGAG 2 cut(s) 281, 2159
Bst2UI CCWGG 4 cut(s) 645, 992, 2982, 3138
BstAPI GCANNNNNTGC 5 cut(s) 764, 3404, 3557, 3586, 3683
BstAUI TGTACA 1 cut(s) 2628
BstBI TTCGAA 1 cut(s) 1735
BstC8I GCNNGC 8 cut(s) 197, 573, 729, 1918, 1922, 2172, 2496, 2736
BstDSI CCRYGG 5 cut(s) 76, 1179, 1689, 2394, 3186
BstFNI CGCG 2 cut(s) 2513, 3336
BstH2I RGCGCY 2 cut(s) 1638, 2705
BstHHI GCGC 3 cut(s) 1637, 2704, 3114
BstMAI GTCTC 8 cut(s) 418, 568, 592, 1514, 1649, 1843, 1976, 3092
BstMCI CGRYCG 2 cut(s) 1060, 2965
BstNI CCWGG 4 cut(s) 645, 992, 2982, 3138
BstNSI RCATGY 1 cut(s) 1391
BstPAI GACNNNNGTC 1 cut(s) 1661
BstSCI CCNGG 4 cut(s) 643, 990, 2980, 3136
BstSFI CTRYAG 2 cut(s) 1464, 1844
BstSLI GKGCMC 2 cut(s) 2788, 3562
BstUI CGCG 2 cut(s) 2513, 3336
BstV2I GAAGAC 3 cut(s) 1098, 1226, 1887
BstX2I RGATCY 3 cut(s) 267, 963, 2310
BstXI CCANNNNNNTGG 1 cut(s) 2470
BstYI RGATCY 3 cut(s) 267, 963, 2310
BsuRI GGCC 6 cut(s) 575, 605, 1075, 2061, 3094, 3389
BtgI CCRYGG 5 cut(s) 76, 1179, 1689, 2394, 3186
BtsI GCAGTG 5 cut(s) 48, 762, 861, 1918, 2631
BtuMI TCGCGA 1 cut(s) 3336
BveI ACCTGC 1 cut(s) 373
Cac8I GCNNGC 8 cut(s) 197, 573, 729, 1918, 1922, 2172, 2496, 2736
CaiI CAGNNNCTG 2 cut(s) 388, 1031
CfoI GCGC 3 cut(s) 1637, 2704, 3114
Cfr13I GGNCC 5 cut(s) 1074, 1183, 1663, 2515, 3601
Csp6I GTAC 8 cut(s) 406, 673, 1018, 2184, 2629, 2672, 2808, 3327
CspCI CAANNNNNGTGG 4 cut(s) 1249, 1284, 1690, 1725
CviQI GTAC 8 cut(s) 406, 673, 1018, 2184, 2629, 2672, 2808, 3327
DraIII CACNNNGTG 1 cut(s) 3586
DrdI GACNNNNNNGTC 1 cut(s) 1377
DriI GACNNNNNGTC 1 cut(s) 2422
DseDI GACNNNNNNGTC 1 cut(s) 1377
Eam1105I GACNNNNNGTC 1 cut(s) 2422
Eco130I CCWWGG 8 cut(s) 76, 606, 1099, 1179, 1689, 1704, 2394, 2922
Eco147I AGGCCT 1 cut(s) 2061
Eco24I GRGCYC 1 cut(s) 3312
Eco31I GGTCTC 2 cut(s) 1514, 1976
Eco32I GATATC 1 cut(s) 2136
Eco47I GGWCC 4 cut(s) 1183, 1663, 2515, 3601
Eco47III AGCGCT 1 cut(s) 1636
Eco57I CTGAAG 7 cut(s) 410, 1223, 1325, 2288, 2430, 2913, 3083
Eco88I CYCGRG 2 cut(s) 565, 1979
EcoO109I RGGNCCY 1 cut(s) 1074
EcoRI GAATTC 4 cut(s) 1136, 2038, 2178, 2350
EcoRII CCWGG 4 cut(s) 643, 990, 2980, 3136
EcoRV GATATC 1 cut(s) 2136
EcoT14I CCWWGG 8 cut(s) 76, 606, 1099, 1179, 1689, 1704, 2394, 2922
EcoT22I ATGCAT 1 cut(s) 760
EcoT38I GRGCYC 1 cut(s) 3312
ErhI CCWWGG 8 cut(s) 76, 606, 1099, 1179, 1689, 1704, 2394, 2922
Esp3I CGTCTC 1 cut(s) 568
FalI AAGNNNNNCTT 2 cut(s) 284, 316
FaqI GGGAC 4 cut(s) 169, 1383, 1414, 2389
FauNDI CATATG 1 cut(s) 3715
FbaI TGATCA 2 cut(s) 1678, 2466
FblI GTMKAC 2 cut(s) 185, 312
FriOI GRGCYC 1 cut(s) 3312
GlaI GCGC 3 cut(s) 1636, 2703, 3113
GsaI CCCAGC 5 cut(s) 824, 963, 2742, 2841, 2901
HaeII RGCGCY 2 cut(s) 1638, 2705
HaeIII GGCC 6 cut(s) 575, 605, 1075, 2061, 3094, 3389
HapII CCGG 4 cut(s) 1007, 1060, 2290, 3324
HhaI GCGC 3 cut(s) 1637, 2704, 3114
Hin6I GCGC 3 cut(s) 1635, 2702, 3112
HinP1I GCGC 3 cut(s) 1635, 2702, 3112
HincII GTYRAC 3 cut(s) 186, 1873, 3183
HindII GTYRAC 3 cut(s) 186, 1873, 3183
HindIII AAGCTT 4 cut(s) 1433, 1721, 3356, 3594
HpaII CCGG 4 cut(s) 1007, 1060, 2290, 3324
Hpy99I CGWCG 2 cut(s) 1088, 1322
HpyCH4IV ACGT 2 cut(s) 1282, 1955
HpySE526I ACGT 2 cut(s) 1282, 1955
HspAI GCGC 3 cut(s) 1635, 2702, 3112
Kpn2I TCCGGA 1 cut(s) 1006
KpnI GGTACC 1 cut(s) 3330
Ksp22I TGATCA 2 cut(s) 1678, 2466
LmnI GCTCC 6 cut(s) 164, 363, 743, 1541, 2344, 3051
LweI GCATC 8 cut(s) 267, 1282, 1429, 1782, 1958, 2951, 3205, 3352
MaeII ACGT 2 cut(s) 1282, 1955
MaeIII GTNAC 9 cut(s) 398, 1456, 1820, 1862, 1900, 1998, 2452, 2644, 3043
MfeI CAATTG 3 cut(s) 1266, 2457, 3501
MflI RGATCY 3 cut(s) 267, 963, 2310
MhlI GDGCHC 7 cut(s) 1546, 2176, 2788, 2876, 3312, 3562, 3582
MlyI GAGTC 2 cut(s) 1637, 1651
MmeI TCCRAC 7 cut(s) 142, 341, 644, 2033, 2125, 2542, 3172
Mph1103I ATGCAT 1 cut(s) 760
MroI TCCGGA 1 cut(s) 1006
MroXI GAANNNNTTC 2 cut(s) 94, 110
MseI TTAA 5 cut(s) 1410, 2117, 2400, 3648, 3750
MslI CAYNNNNRTG 4 cut(s) 2468, 2867, 3611, 3735
MspA1I CMGCKG 6 cut(s) 1345, 1463, 1570, 1860, 2450, 2837
MspI CCGG 4 cut(s) 1007, 1060, 2290, 3324
MspR9I CCNGG 4 cut(s) 645, 992, 2982, 3138
MunI CAATTG 3 cut(s) 1266, 2457, 3501
Mva1269I GAATGC 2 cut(s) 758, 2087
MvaI CCWGG 4 cut(s) 645, 992, 2982, 3138
MvnI CGCG 2 cut(s) 2513, 3336
NcoI CCATGG 4 cut(s) 76, 1179, 1689, 2394
NdeI CATATG 1 cut(s) 3715
NheI GCTAGC 2 cut(s) 2494, 2734
NlaIV GGNNCC 4 cut(s) 269, 531, 3328, 3742
NmeAIII GCCGAG 2 cut(s) 793, 2730
NmuCI GTSAC 7 cut(s) 1456, 1820, 1862, 1900, 1998, 2452, 2644
NruI TCGCGA 1 cut(s) 3336
NsiI ATGCAT 1 cut(s) 760
NspI RCATGY 1 cut(s) 1391
NspV TTCGAA 1 cut(s) 1735
OliI CACNNNNGTG 1 cut(s) 3735
PaeR7I CTCGAG 1 cut(s) 1979
PaqCI CACCTGC 1 cut(s) 373
PasI CCCWGGG 1 cut(s) 991
PceI AGGCCT 1 cut(s) 2061
PcsI WCGNNNNNNNCGW 1 cut(s) 1323
PctI GAATGC 2 cut(s) 758, 2087
PdmI GAANNNNTTC 2 cut(s) 94, 110
PfeI GAWTC 8 cut(s) 14, 394, 446, 1175, 1649, 2233, 2286, 2956
PflFI GACNNNGTC 2 cut(s) 308, 1322
PleI GAGTC 2 cut(s) 1637, 1651
PpsI GAGTC 2 cut(s) 1637, 1651
PshAI GACNNNNGTC 1 cut(s) 1661
PsiI TTATAA 1 cut(s) 3441
Psp1406I AACGTT 2 cut(s) 1282, 1955
Psp6I CCWGG 4 cut(s) 643, 990, 2980, 3136
PspFI CCCAGC 5 cut(s) 820, 959, 2738, 2837, 2897
PspGI CCWGG 4 cut(s) 643, 990, 2980, 3136
PspN4I GGNNCC 4 cut(s) 269, 531, 3328, 3742
PspPI GGNCC 5 cut(s) 1074, 1183, 1663, 2515, 3601
PstI CTGCAG 1 cut(s) 1468
PstNI CAGNNNCTG 2 cut(s) 388, 1031
PsuI RGATCY 3 cut(s) 267, 963, 2310
PsyI GACNNNGTC 2 cut(s) 308, 1322
PvuII CAGCTG 5 cut(s) 1345, 1463, 1860, 2450, 2837
RruI TCGCGA 1 cut(s) 3336
RsaI GTAC 8 cut(s) 407, 674, 1019, 2185, 2630, 2673, 2809, 3328
RsaNI GTAC 8 cut(s) 406, 673, 1018, 2184, 2629, 2672, 2808, 3327
RseI CAYNNNNRTG 4 cut(s) 2468, 2867, 3611, 3735
SalI GTCGAC 1 cut(s) 184
SaqAI TTAA 5 cut(s) 1410, 2117, 2400, 3648, 3750
Sau96I GGNCC 5 cut(s) 1074, 1183, 1663, 2515, 3601
ScaI AGTACT 2 cut(s) 407, 2673
SchI GAGTC 2 cut(s) 1637, 1651
ScrFI CCNGG 4 cut(s) 645, 992, 2982, 3138
SduI GDGCHC 7 cut(s) 1546, 2176, 2788, 2876, 3312, 3562, 3582
SfaNI GCATC 8 cut(s) 267, 1282, 1429, 1782, 1958, 2951, 3205, 3352
SfcI CTRYAG 2 cut(s) 1464, 1844
Sfr274I CTCGAG 1 cut(s) 1979
SfuI TTCGAA 1 cut(s) 1735
SinI GGWCC 4 cut(s) 1183, 1663, 2515, 3601
SlaI CTCGAG 1 cut(s) 1979
SmiMI CAYNNNNRTG 4 cut(s) 2468, 2867, 3611, 3735
SmlI CTYRAG 2 cut(s) 1979, 3725
SmoI CTYRAG 2 cut(s) 1979, 3725
SpeI ACTAGT 2 cut(s) 371, 2812
SseBI AGGCCT 1 cut(s) 2061
SspI AATATT 2 cut(s) 801, 1053
StuI AGGCCT 1 cut(s) 2061
StyD4I CCNGG 4 cut(s) 643, 990, 2980, 3136
StyI CCWWGG 8 cut(s) 76, 606, 1099, 1179, 1689, 1704, 2394, 2922
TaiI ACGT 2 cut(s) 1285, 1958
TaqII GACCGA 1 cut(s) 1888
TatI WGTACW 4 cut(s) 405, 672, 2628, 2671
TauI GCSGC 2 cut(s) 959, 3392
TfiI GAWTC 8 cut(s) 14, 394, 446, 1175, 1649, 2233, 2286, 2956
Tru1I TTAA 5 cut(s) 1410, 2117, 2400, 3648, 3750
Tru9I TTAA 5 cut(s) 1410, 2117, 2400, 3648, 3750
TseFI GTSAC 7 cut(s) 1456, 1820, 1862, 1900, 1998, 2452, 2644
Tsp45I GTSAC 7 cut(s) 1456, 1820, 1862, 1900, 1998, 2452, 2644
Tth111I GACNNNGTC 2 cut(s) 308, 1322
VneI GTGCAC 1 cut(s) 3558
VpaK11BI GGWCC 4 cut(s) 1183, 1663, 2515, 3601
XapI RAATTY 7 cut(s) 94, 1136, 1884, 2038, 2178, 2350, 3413
XceI RCATGY 1 cut(s) 1391
XhoI CTCGAG 1 cut(s) 1979
XmiI GTMKAC 2 cut(s) 185, 312
XmnI GAANNNNTTC 2 cut(s) 94, 110
ZrmI AGTACT 2 cut(s) 407, 2673
Zsp2I ATGCAT 1 cut(s) 760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.