Multidrug resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 20 - 278 | 1.8e-41 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 361 - 510 | 5.2e-32 | ABC transporter |
| SMC_N | PF02463 | 396 - 552 | 1e-06 | RecF/RecN/SMC N terminal domain |
| ABC_membrane | PF00664 | 697 - 966 | 2.1e-44 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1036 - 1184 | 6.6e-33 | ABC transporter |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3413 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1697 |
| Acc36I | ACCTGC | 1 cut(s) | 1411 |
| AccB1I | GGYRCC | 2 cut(s) | 590, 3740 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1859, 3218 |
| AccI | GTMKAC | 1 cut(s) | 177 |
| AccII | CGCG | 2 cut(s) | 126, 966 |
| AciI | CCGC | 4 cut(s) | 124, 640, 2762, 3671 |
| AcoI | YGGCCR | 2 cut(s) | 882, 3475 |
| AcsI | RAATTY | 3 cut(s) | 346, 1203, 1503 |
| AcuI | CTGAAG | 6 cut(s) | 698, 1005, 2108, 2430, 2455, 3390 |
| AdeI | CACNNNGTG | 1 cut(s) | 1859 |
| AfaI | GTAC | 3 cut(s) | 185, 931, 1560 |
| AfeI | AGCGCT | 1 cut(s) | 1531 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 544, 545, 1196, 1263, 1859, 3218, 3535 |
| AflII | CTTAAG | 1 cut(s) | 1097 |
| AhlI | ACTAGT | 1 cut(s) | 3148 |
| AjnI | CCWGG | 3 cut(s) | 435, 1813, 1846 |
| AleI | CACNNNNGTG | 1 cut(s) | 2071 |
| Alw21I | GWGCWC | 2 cut(s) | 120, 2900 |
| Alw26I | GTCTC | 2 cut(s) | 262, 1488 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3368 |
| Ama87I | CYCGRG | 3 cut(s) | 921, 2728, 3501 |
| Aor51HI | AGCGCT | 1 cut(s) | 1531 |
| AoxI | GGCC | 5 cut(s) | 838, 882, 2725, 3086, 3475 |
| ApoI | RAATTY | 3 cut(s) | 346, 1203, 1503 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3165, 3197 |
| AseI | ATTAAT | 1 cut(s) | 2501 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 683, 1284, 2310, 2334 |
| AspLEI | GCGC | 1 cut(s) | 1532 |
| AspS9I | GGNCC | 4 cut(s) | 252, 1850, 2726, 3517 |
| AsuC2I | CCSGG | 2 cut(s) | 540, 2398 |
| AsuHPI | GGTGA | 6 cut(s) | 434, 839, 1604, 1930, 2956, 3685 |
| AsuII | TTCGAA | 1 cut(s) | 2314 |
| AvaI | CYCGRG | 3 cut(s) | 921, 2728, 3501 |
| AvaII | GGWCC | 3 cut(s) | 252, 1850, 3517 |
| AxyI | CCTNAGG | 1 cut(s) | 311 |
| BaeGI | GKGCMC | 2 cut(s) | 2398, 3556 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1632, 1665, 3508, 3541 |
| BalI | TGGCCA | 2 cut(s) | 884, 3477 |
| BamHI | GGATCC | 2 cut(s) | 1682, 3221 |
| BanI | GGYRCC | 2 cut(s) | 590, 3740 |
| Bbv12I | GWGCWC | 2 cut(s) | 120, 2900 |
| BciT130I | CCWGG | 3 cut(s) | 437, 1815, 1848 |
| BciVI | GTATCC | 1 cut(s) | 3536 |
| BclI | TGATCA | 1 cut(s) | 2362 |
| BcnI | CCSGG | 2 cut(s) | 540, 2398 |
| BcoDI | GTCTC | 2 cut(s) | 262, 1488 |
| BcuI | ACTAGT | 1 cut(s) | 3148 |
| BfaI | CTAG | 7 cut(s) | 2099, 2327, 2571, 2598, 2984, 3149, 3578 |
| BfmI | CTRYAG | 5 cut(s) | 1404, 2436, 2481, 2622, 2805 |
| BfoI | RGCGCY | 1 cut(s) | 1533 |
| BfrI | CTTAAG | 1 cut(s) | 1097 |
| BfuAI | ACCTGC | 1 cut(s) | 1411 |
| BfuI | GTATCC | 1 cut(s) | 3536 |
| BlpI | GCTNAGC | 2 cut(s) | 119, 2233 |
| BmcAI | AGTACT | 2 cut(s) | 185, 931 |
| Bme1390I | CCNGG | 5 cut(s) | 437, 540, 1815, 1848, 2398 |
| Bme18I | GGWCC | 3 cut(s) | 252, 1850, 3517 |
| BmeT110I | CYCGRG | 3 cut(s) | 921, 2728, 3501 |
| BmgT120I | GGNCC | 4 cut(s) | 252, 1850, 2726, 3517 |
| BmiI | GGNNCC | 5 cut(s) | 592, 1684, 3223, 3519, 3742 |
| BmrFI | CCNGG | 5 cut(s) | 437, 540, 1815, 1848, 2398 |
| BmrI | ACTGGG | 3 cut(s) | 1978, 2099, 3074 |
| BmsI | GCATC | 6 cut(s) | 379, 1107, 1528, 1589, 2704, 2908 |
| BmuI | ACTGGG | 3 cut(s) | 1978, 2099, 3074 |
| BpmI | CTGGAG | 5 cut(s) | 618, 627, 1470, 1743, 2249 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1365, 2146 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 119, 2233 |
| Bpu14I | TTCGAA | 1 cut(s) | 2314 |
| BpuEI | CTTGAG | 6 cut(s) | 176, 719, 1404, 1882, 3104, 3292 |
| BpuMI | CCSGG | 2 cut(s) | 540, 2398 |
| BsaAI | YACGTR | 1 cut(s) | 1631 |
| BsaI | GGTCTC | 1 cut(s) | 1488 |
| BsaJI | CCNNGG | 5 cut(s) | 538, 1814, 1846, 2729, 3420 |
| BsaWI | WCCGGW | 1 cut(s) | 970 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 544, 545, 1196, 1263, 1859, 3218, 3535 |
| Bse1I | ACTGG | 9 cut(s) | 507, 1250, 1984, 2094, 2905, 3080, 3549, 3597, 3723 |
| Bse21I | CCTNAGG | 1 cut(s) | 311 |
| Bse3DI | GCAATG | 2 cut(s) | 690, 2910 |
| BseBI | CCWGG | 3 cut(s) | 437, 1815, 1848 |
| BseDI | CCNNGG | 5 cut(s) | 538, 1814, 1846, 2729, 3420 |
| BseGI | GGATG | 8 cut(s) | 275, 534, 1298, 1543, 1971, 2886, 3245, 3544 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 544, 545, 1196, 1263, 1859, 3218, 3535 |
| BseMI | GCAATG | 2 cut(s) | 690, 2910 |
| BseMII | CTCAG | 9 cut(s) | 133, 255, 325, 408, 942, 1105, 1556, 2054, 3000 |
| BseNI | ACTGG | 9 cut(s) | 507, 1250, 1984, 2094, 2905, 3080, 3549, 3597, 3723 |
| BseRI | GAGGAG | 4 cut(s) | 2023, 2252, 3026, 3471 |
| BseSI | GKGCMC | 2 cut(s) | 2398, 3556 |
| BseYI | CCCAGC | 2 cut(s) | 1120, 1924 |
| BsgI | GTGCAG | 1 cut(s) | 1226 |
| Bsh1236I | CGCG | 2 cut(s) | 126, 966 |
| BshFI | GGCC | 5 cut(s) | 840, 884, 2727, 3088, 3477 |
| BshNI | GGYRCC | 2 cut(s) | 590, 3740 |
| BsiHKAI | GWGCWC | 2 cut(s) | 120, 2900 |
| BsiHKCI | CYCGRG | 3 cut(s) | 921, 2728, 3501 |
| BsiSI | CCGG | 3 cut(s) | 540, 971, 2398 |
| BslFI | GGGAC | 1 cut(s) | 3168 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 544, 545, 1196, 1263, 1859, 3218, 3535 |
| BsmAI | GTCTC | 2 cut(s) | 262, 1488 |
| BsmFI | GGGAC | 1 cut(s) | 3168 |
| BsmI | GAATGC | 2 cut(s) | 898, 2068 |
| BsnI | GGCC | 5 cut(s) | 840, 884, 2727, 3088, 3477 |
| Bso31I | GGTCTC | 1 cut(s) | 1488 |
| BsoBI | CYCGRG | 3 cut(s) | 921, 2728, 3501 |
| Bsp119I | TTCGAA | 1 cut(s) | 2314 |
| Bsp1286I | GDGCHC | 4 cut(s) | 120, 2398, 2900, 3556 |
| Bsp1407I | TGTACA | 1 cut(s) | 1558 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 119, 2233 |
| Bsp19I | CCATGG | 1 cut(s) | 3420 |
| BspACI | CCGC | 4 cut(s) | 124, 640, 2762, 3671 |
| BspANI | GGCC | 5 cut(s) | 840, 884, 2727, 3088, 3477 |
| BspCNI | CTCAG | 9 cut(s) | 132, 256, 324, 409, 943, 1104, 1555, 2053, 3001 |
| BspFNI | CGCG | 2 cut(s) | 126, 966 |
| BspHI | TCATGA | 2 cut(s) | 2529, 3403 |
| BspLI | GGNNCC | 5 cut(s) | 592, 1684, 3223, 3519, 3742 |
| BspMAI | CTGCAG | 2 cut(s) | 1408, 2440 |
| BspMI | ACCTGC | 1 cut(s) | 1411 |
| BspQI | GCTCTTC | 1 cut(s) | 516 |
| BspT104I | TTCGAA | 1 cut(s) | 2314 |
| BspT107I | GGYRCC | 2 cut(s) | 590, 3740 |
| BspTI | CTTAAG | 1 cut(s) | 1097 |
| BspTNI | GGTCTC | 1 cut(s) | 1488 |
| BsrDI | GCAATG | 2 cut(s) | 690, 2910 |
| BsrGI | TGTACA | 1 cut(s) | 1558 |
| BsrI | ACTGG | 9 cut(s) | 507, 1250, 1984, 2094, 2905, 3080, 3549, 3597, 3723 |
| BssECI | CCNNGG | 5 cut(s) | 538, 1814, 1846, 2729, 3420 |
| BssT1I | CCWWGG | 1 cut(s) | 3420 |
| Bst2UI | CCWGG | 3 cut(s) | 437, 1815, 1848 |
| Bst4CI | ACNGT | 8 cut(s) | 338, 646, 1616, 2155, 2444, 2751, 3181, 3364 |
| Bst6I | CTCTTC | 5 cut(s) | 388, 516, 637, 2127, 2582 |
| BstAFI | CTTAAG | 1 cut(s) | 1097 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 506, 932, 3551 |
| BstAUI | TGTACA | 1 cut(s) | 1558 |
| BstBAI | YACGTR | 1 cut(s) | 1631 |
| BstBI | TTCGAA | 1 cut(s) | 2314 |
| BstC8I | GCNNGC | 5 cut(s) | 1835, 1874, 1904, 2082, 2110 |
| BstDSI | CCRYGG | 1 cut(s) | 3420 |
| BstF5I | GGATG | 8 cut(s) | 275, 534, 1298, 1543, 1971, 2886, 3245, 3544 |
| BstFNI | CGCG | 2 cut(s) | 126, 966 |
| BstH2I | RGCGCY | 1 cut(s) | 1533 |
| BstHHI | GCGC | 1 cut(s) | 1532 |
| BstMAI | GTCTC | 2 cut(s) | 262, 1488 |
| BstNI | CCWGG | 3 cut(s) | 437, 1815, 1848 |
| BstNSI | RCATGY | 1 cut(s) | 1934 |
| BstSCI | CCNGG | 5 cut(s) | 435, 538, 1813, 1846, 2396 |
| BstSFI | CTRYAG | 5 cut(s) | 1404, 2436, 2481, 2622, 2805 |
| BstSLI | GKGCMC | 2 cut(s) | 2398, 3556 |
| BstSNI | TACGTA | 1 cut(s) | 1631 |
| BstUI | CGCG | 2 cut(s) | 126, 966 |
| BstX2I | RGATCY | 4 cut(s) | 1253, 1682, 2426, 3221 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1786 |
| BstYI | RGATCY | 4 cut(s) | 1253, 1682, 2426, 3221 |
| Bsu36I | CCTNAGG | 1 cut(s) | 311 |
| BsuI | GTATCC | 1 cut(s) | 3536 |
| BsuRI | GGCC | 5 cut(s) | 840, 884, 2727, 3088, 3477 |
| BtgI | CCRYGG | 1 cut(s) | 3420 |
| BtgZI | GCGATG | 1 cut(s) | 1566 |
| BtsCI | GGATG | 8 cut(s) | 275, 534, 1298, 1543, 1971, 2886, 3245, 3544 |
| BtsI | GCAGTG | 2 cut(s) | 1144, 2670 |
| BveI | ACCTGC | 1 cut(s) | 1411 |
| Cac8I | GCNNGC | 5 cut(s) | 1835, 1874, 1904, 2082, 2110 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3368 |
| CciI | TCATGA | 2 cut(s) | 2529, 3403 |
| CfoI | GCGC | 1 cut(s) | 1532 |
| Cfr13I | GGNCC | 4 cut(s) | 252, 1850, 2726, 3517 |
| CseI | GACGC | 2 cut(s) | 115, 656 |
| Csp6I | GTAC | 3 cut(s) | 184, 930, 1559 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3166, 3201 |
| CviQI | GTAC | 3 cut(s) | 184, 930, 1559 |
| DraI | TTTAAA | 1 cut(s) | 3106 |
| DraIII | CACNNNGTG | 1 cut(s) | 1859 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1697 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1697 |
| EaeI | YGGCCR | 2 cut(s) | 882, 3475 |
| Eam1104I | CTCTTC | 5 cut(s) | 388, 516, 637, 2127, 2582 |
| EarI | CTCTTC | 5 cut(s) | 388, 516, 637, 2127, 2582 |
| Eco105I | TACGTA | 1 cut(s) | 1631 |
| Eco130I | CCWWGG | 1 cut(s) | 3420 |
| Eco147I | AGGCCT | 1 cut(s) | 3088 |
| Eco31I | GGTCTC | 1 cut(s) | 1488 |
| Eco32I | GATATC | 1 cut(s) | 1412 |
| Eco47I | GGWCC | 3 cut(s) | 252, 1850, 3517 |
| Eco47III | AGCGCT | 1 cut(s) | 1531 |
| Eco57I | CTGAAG | 6 cut(s) | 698, 1005, 2108, 2430, 2455, 3390 |
| Eco81I | CCTNAGG | 1 cut(s) | 311 |
| Eco88I | CYCGRG | 3 cut(s) | 921, 2728, 3501 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3517 |
| EcoRII | CCWGG | 3 cut(s) | 435, 1813, 1846 |
| EcoRV | GATATC | 1 cut(s) | 1412 |
| EcoT14I | CCWWGG | 1 cut(s) | 3420 |
| ErhI | CCWWGG | 1 cut(s) | 3420 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1031, 1063, 2917, 2949 |
| FaqI | GGGAC | 1 cut(s) | 3168 |
| FauI | CCCGC | 1 cut(s) | 2755 |
| FauNDI | CATATG | 1 cut(s) | 1012 |
| FbaI | TGATCA | 1 cut(s) | 2362 |
| FblI | GTMKAC | 1 cut(s) | 177 |
| FokI | GGATG | 8 cut(s) | 262, 521, 1285, 1550, 1958, 2873, 3252, 3551 |
| FspBI | CTAG | 7 cut(s) | 2099, 2327, 2571, 2598, 2984, 3149, 3578 |
| GlaI | GCGC | 1 cut(s) | 1531 |
| GsaI | CCCAGC | 2 cut(s) | 1124, 1928 |
| GsuI | CTGGAG | 5 cut(s) | 618, 627, 1470, 1743, 2249 |
| HaeII | RGCGCY | 1 cut(s) | 1533 |
| HaeIII | GGCC | 5 cut(s) | 840, 884, 2727, 3088, 3477 |
| HapII | CCGG | 3 cut(s) | 540, 971, 2398 |
| HgaI | GACGC | 2 cut(s) | 115, 656 |
| HhaI | GCGC | 1 cut(s) | 1532 |
| Hin6I | GCGC | 1 cut(s) | 1530 |
| HinP1I | GCGC | 1 cut(s) | 1530 |
| HincII | GTYRAC | 6 cut(s) | 43, 178, 1045, 1155, 1702, 2633 |
| HindII | GTYRAC | 6 cut(s) | 43, 178, 1045, 1155, 1702, 2633 |
| HindIII | AAGCTT | 1 cut(s) | 2560 |
| HpaII | CCGG | 3 cut(s) | 540, 971, 2398 |
| HphI | GGTGA | 6 cut(s) | 434, 839, 1604, 1930, 2956, 3685 |
| Hpy166II | GTNNAC | 8 cut(s) | 43, 178, 1045, 1155, 1702, 1894, 2633, 3645 |
| Hpy8I | GTNNAC | 8 cut(s) | 43, 178, 1045, 1155, 1702, 1894, 2633, 3645 |
| Hpy99I | CGWCG | 1 cut(s) | 182 |
| HpyCH4III | ACNGT | 8 cut(s) | 338, 646, 1616, 2155, 2444, 2751, 3181, 3364 |
| HpyCH4IV | ACGT | 2 cut(s) | 321, 1630 |
| HpySE526I | ACGT | 2 cut(s) | 321, 1630 |
| HspAI | GCGC | 1 cut(s) | 1530 |
| Ksp22I | TGATCA | 1 cut(s) | 2362 |
| LguI | GCTCTTC | 1 cut(s) | 516 |
| LmnI | GCTCC | 8 cut(s) | 143, 664, 756, 1334, 1724, 1789, 3013, 3422 |
| LweI | GCATC | 6 cut(s) | 379, 1107, 1528, 1589, 2704, 2908 |
| MaeI | CTAG | 7 cut(s) | 2099, 2327, 2571, 2598, 2984, 3149, 3578 |
| MaeII | ACGT | 2 cut(s) | 321, 1630 |
| MfeI | CAATTG | 3 cut(s) | 210, 1442, 3726 |
| MflI | RGATCY | 4 cut(s) | 1253, 1682, 2426, 3221 |
| MhlI | GDGCHC | 4 cut(s) | 120, 2398, 2900, 3556 |
| MlsI | TGGCCA | 2 cut(s) | 884, 3477 |
| MluNI | TGGCCA | 2 cut(s) | 884, 3477 |
| MlyI | GAGTC | 3 cut(s) | 974, 1083, 3656 |
| MmeI | TCCRAC | 4 cut(s) | 199, 230, 781, 1111 |
| Mox20I | TGGCCA | 2 cut(s) | 884, 3477 |
| MroXI | GAANNNNTTC | 4 cut(s) | 683, 1284, 2310, 2334 |
| MscI | TGGCCA | 2 cut(s) | 884, 3477 |
| MslI | CAYNNNNRTG | 6 cut(s) | 764, 2041, 2071, 2528, 2891, 3671 |
| Msp20I | TGGCCA | 2 cut(s) | 884, 3477 |
| MspA1I | CMGCKG | 2 cut(s) | 1240, 2801 |
| MspCI | CTTAAG | 1 cut(s) | 1097 |
| MspI | CCGG | 3 cut(s) | 540, 971, 2398 |
| MspR9I | CCNGG | 5 cut(s) | 437, 540, 1815, 1848, 2398 |
| MunI | CAATTG | 3 cut(s) | 210, 1442, 3726 |
| Mva1269I | GAATGC | 2 cut(s) | 898, 2068 |
| MvaI | CCWGG | 3 cut(s) | 437, 1815, 1848 |
| MvnI | CGCG | 2 cut(s) | 126, 966 |
| NciI | CCSGG | 2 cut(s) | 540, 2398 |
| NcoI | CCATGG | 1 cut(s) | 3420 |
| NdeI | CATATG | 1 cut(s) | 1012 |
| NlaIV | GGNNCC | 5 cut(s) | 592, 1684, 3223, 3519, 3742 |
| NmuCI | GTSAC | 6 cut(s) | 916, 1351, 1936, 2506, 3242, 3276 |
| NspI | RCATGY | 1 cut(s) | 1934 |
| NspV | TTCGAA | 1 cut(s) | 2314 |
| OliI | CACNNNNGTG | 1 cut(s) | 2071 |
| PagI | TCATGA | 2 cut(s) | 2529, 3403 |
| PceI | AGGCCT | 1 cut(s) | 3088 |
| PciSI | GCTCTTC | 1 cut(s) | 516 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 174 |
| PctI | GAATGC | 2 cut(s) | 898, 2068 |
| PdmI | GAANNNNTTC | 4 cut(s) | 683, 1284, 2310, 2334 |
| PfeI | GAWTC | 9 cut(s) | 732, 858, 1285, 2183, 2208, 2335, 2842, 3115, 3574 |
| PflFI | GACNNNGTC | 1 cut(s) | 173 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1859, 3218 |
| PleI | GAGTC | 3 cut(s) | 974, 1083, 3656 |
| PpsI | GAGTC | 3 cut(s) | 974, 1083, 3656 |
| Ppu21I | YACGTR | 1 cut(s) | 1631 |
| PpuMI | RGGWCCY | 1 cut(s) | 3517 |
| PshBI | ATTAAT | 1 cut(s) | 2501 |
| PsiI | TTATAA | 1 cut(s) | 3413 |
| Psp5II | RGGWCCY | 1 cut(s) | 3517 |
| Psp6I | CCWGG | 3 cut(s) | 435, 1813, 1846 |
| PspFI | CCCAGC | 2 cut(s) | 1120, 1924 |
| PspGI | CCWGG | 3 cut(s) | 435, 1813, 1846 |
| PspN4I | GGNNCC | 5 cut(s) | 592, 1684, 3223, 3519, 3742 |
| PspPI | GGNCC | 4 cut(s) | 252, 1850, 2726, 3517 |
| PspPPI | RGGWCCY | 1 cut(s) | 3517 |
| PstI | CTGCAG | 2 cut(s) | 1408, 2440 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3368 |
| PsuI | RGATCY | 4 cut(s) | 1253, 1682, 2426, 3221 |
| PsyI | GACNNNGTC | 1 cut(s) | 173 |
| PvuII | CAGCTG | 2 cut(s) | 1240, 2801 |
| RsaI | GTAC | 3 cut(s) | 185, 931, 1560 |
| RsaNI | GTAC | 3 cut(s) | 184, 930, 1559 |
| RseI | CAYNNNNRTG | 6 cut(s) | 764, 2041, 2071, 2528, 2891, 3671 |
| SalI | GTCGAC | 1 cut(s) | 176 |
| SapI | GCTCTTC | 1 cut(s) | 516 |
| Sau96I | GGNCC | 4 cut(s) | 252, 1850, 2726, 3517 |
| SbfI | CCTGCAGG | 1 cut(s) | 1408 |
| ScaI | AGTACT | 2 cut(s) | 185, 931 |
| SchI | GAGTC | 3 cut(s) | 974, 1083, 3656 |
| ScrFI | CCNGG | 5 cut(s) | 437, 540, 1815, 1848, 2398 |
| SdaI | CCTGCAGG | 1 cut(s) | 1408 |
| SduI | GDGCHC | 4 cut(s) | 120, 2398, 2900, 3556 |
| SfaNI | GCATC | 6 cut(s) | 379, 1107, 1528, 1589, 2704, 2908 |
| SfcI | CTRYAG | 5 cut(s) | 1404, 2436, 2481, 2622, 2805 |
| SfuI | TTCGAA | 1 cut(s) | 2314 |
| SinI | GGWCC | 3 cut(s) | 252, 1850, 3517 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 764, 2041, 2071, 2528, 2891, 3671 |
| SmlI | CTYRAG | 7 cut(s) | 191, 698, 1097, 1419, 1897, 3119, 3271 |
| SmoI | CTYRAG | 7 cut(s) | 191, 698, 1097, 1419, 1897, 3119, 3271 |
| SnaBI | TACGTA | 1 cut(s) | 1631 |
| SpeI | ACTAGT | 1 cut(s) | 3148 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1408 |
| SseBI | AGGCCT | 1 cut(s) | 3088 |
| SsiI | CCGC | 4 cut(s) | 124, 640, 2762, 3671 |
| SspI | AATATT | 3 cut(s) | 1315, 1947, 2973 |
| SspMI | CTAG | 7 cut(s) | 2099, 2327, 2571, 2598, 2984, 3149, 3578 |
| StuI | AGGCCT | 1 cut(s) | 3088 |
| StyD4I | CCNGG | 5 cut(s) | 435, 538, 1813, 1846, 2396 |
| StyI | CCWWGG | 1 cut(s) | 3420 |
| TaaI | ACNGT | 8 cut(s) | 338, 646, 1616, 2155, 2444, 2751, 3181, 3364 |
| TaiI | ACGT | 2 cut(s) | 324, 1633 |
| TaqI | TCGA | 4 cut(s) | 177, 333, 2314, 2710 |
| TatI | WGTACW | 3 cut(s) | 183, 929, 1558 |
| TauI | GCSGC | 1 cut(s) | 126 |
| TfiI | GAWTC | 9 cut(s) | 732, 858, 1285, 2183, 2208, 2335, 2842, 3115, 3574 |
| TseFI | GTSAC | 6 cut(s) | 916, 1351, 1936, 2506, 3242, 3276 |
| Tsp45I | GTSAC | 6 cut(s) | 916, 1351, 1936, 2506, 3242, 3276 |
| TspGWI | ACGGA | 1 cut(s) | 3214 |
| Tth111I | GACNNNGTC | 1 cut(s) | 173 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1859, 3218 |
| Vha464I | CTTAAG | 1 cut(s) | 1097 |
| VpaK11BI | GGWCC | 3 cut(s) | 252, 1850, 3517 |
| VspI | ATTAAT | 1 cut(s) | 2501 |
| XapI | RAATTY | 3 cut(s) | 346, 1203, 1503 |
| XbaI | TCTAGA | 2 cut(s) | 2597, 2983 |
| XceI | RCATGY | 1 cut(s) | 1934 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 286 |
| XmiI | GTMKAC | 1 cut(s) | 177 |
| XmnI | GAANNNNTTC | 4 cut(s) | 683, 1284, 2310, 2334 |
| XspI | CTAG | 7 cut(s) | 2099, 2327, 2571, 2598, 2984, 3149, 3578 |
| ZrmI | AGTACT | 2 cut(s) | 185, 931 |