RLG00000021908

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000317
Physical Location & Seq
Forward (+)
79229022 .. 79232264
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021908

Sequence Viewer

Length: 1536 bp
ATGCATGCCCATGGTGTCGATAAAGTCCTGATGATCTTCGGGTTGTTGGGAGCCATCGGCGATGGCTGCTCTACTCCTTTGGTCTTGCTAATCAGTCGATGCTTGTGGAACAATGTCGGCGGCGCCTCAAGTGACGCTCAAGATGTTTTCTTGCATAACATCAATACGAATGCAGTGGCGCTATTGTACTTGGCTTGTGGATCATGGGTCAGTTGTTTCCTAGAGGGGTATTGTTGGACAAGAACTGGTGAGAGACAAGTAGCTAGAATGAGAATGAGATATTTGAAAGCAGTTCTAAGGCAAGATGTGGGCTACTTTGATCTACATGTCACAAGCACCTCTGAGGTCATCACCAGCATCTCTAGTGATAGCCTCGTGATTCAAGACGTCCTCAGTGAAAAGGTTCGATCTTTAGTTCTTTACCATCATTTTCAAAAGGAAATGCGATTTTCCATCGTTGCATTTCCGTTTGTGGTGCTTCTGGTAATCCCGGGATTGATTTACGGAAGGATTTTGATGGGACTGGCTAGACAGATTAGTGATGAATACAACAAGGCTGGCACAATAGCAGAACATGCACTGTCATCAATCAGAACCGTTTACGCTTTTGTTGGGGAAAAGAAAGCAATTTCGGAGTTCTCTGCAGCTCTACATGGCTCAGTGAAGTTGGGATTGATAACGGCATCGCGCGCTTTTGCTATTTGGTCTTTCATGTCCTACTATGGCAGCAGAATGGTCATGTATCATGGCGCACTTGGAGGCAATGTTATAACAGCTCGTACTGGAATAACCATGGGTGGATTGGCATTCGGGGCAGGGTTGTCAAACCTGAAGTACTTCTCGGAAGCGTGCTCAGCAGCAGAGCGAATATTGGAGGTGATACGGAGAGTCCCCAAGATCGACTCAGACAACATGGAAGGTGAAATGCTAGAGAACGTTTACGGACAAGTCGAATTCAAGCACGTTGACTTCGCCTACCCTTCAAGGCCAGAAAGCATCATCTTCAAAAACTTTAACTTGACGGTTCCAGCTGGGAAAACTGTGGCATTGGTGGGTGGTAGAGGCTCGGGAAAGTCGACAGTAATTTCTTTGTTACAGAGATTTTATGATCCACTTGGAGGTGAGATACACATTGATGGGGTGGCCATAAAAAATTGTCAGCTTAAGTGGCTTAGGTCCCAGGTGGGGCTGGTGAGCCAAGAACCTGCTCTTTTTGCAACCAGCATAAAAGAGAACATACTGTATGGGAAAGAAGATGCTGACATTGAAGAGGTTATTGAGGCTGGTAAAGCTTCAAATGCTCACGATTTCATCTCTCAGTTGCCTCTGGGACATGACACACAGGGACAGAAGAAGAGTAATTCAAAAACGTGGATAATTGTTGGGTCTATACTTGGTAGACTACCACTATTGGCATTCATGCTACTCTGGGTACATAAATACAATGAAAGGAAGCATTTGGAAGAGATGGAGAAAGCTGCAGATTTAGAAGAAGCTCTGCATGTGACAACAGTTGGGGATACAAAAGCACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

512

Amino Acids

56.25

Weight (kDa)

7.28

Isoelectric Point (pI)

34.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 11 - 237 5e-29 ABC transporter transmembrane region
ABC_tran PF00005 336 - 438 4.7e-18 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 770
AatII GACGTC 1 cut(s) 390
Acc36I ACCTGC 1 cut(s) 1213
AccB1I GGYRCC 1 cut(s) 122
AccI GTMKAC 2 cut(s) 1076, 1399
AccII CGCG 2 cut(s) 688, 690
AciI CCGC 1 cut(s) 120
AclI AACGTT 1 cut(s) 936
AclWI GGATC 2 cut(s) 208, 1103
AcoI YGGCCR 1 cut(s) 1143
AcsI RAATTY 1 cut(s) 953
AcuI CTGAAG 1 cut(s) 851
AcyI GRCGYC 2 cut(s) 123, 387
AfaI GTAC 4 cut(s) 188, 781, 836, 1434
AfiI CCNNNNNNNGG 2 cut(s) 1118, 1185
AflII CTTAAG 1 cut(s) 1163
AflIII ACRYGT 1 cut(s) 325
AgsI TTSAA 9 cut(s) 286, 383, 434, 958, 984, 1006, 1268, 1296, 1365
AjnI CCWGG 1 cut(s) 1179
AluBI AGCT 8 cut(s) 263, 647, 776, 1031, 1162, 1292, 1478, 1496
AluI AGCT 8 cut(s) 263, 647, 776, 1031, 1162, 1292, 1478, 1496
Alw21I GWGCWC 1 cut(s) 854
Alw26I GTCTC 1 cut(s) 247
AlwI GGATC 2 cut(s) 208, 1103
Ama87I CYCGRG 2 cut(s) 490, 1066
AoxI GGCC 2 cut(s) 986, 1143
ApeKI GCWGC 5 cut(s) 66, 644, 726, 857, 1478
ApoI RAATTY 1 cut(s) 953
Asp700I GAANNNNTTC 2 cut(s) 402, 836
AspLEI GCGC 5 cut(s) 125, 181, 690, 692, 752
AspS9I GGNCC 1 cut(s) 1176
AsuC2I CCSGG 2 cut(s) 491, 492
AsuHPI GGTGA 6 cut(s) 260, 343, 889, 932, 1133, 1204
AvaI CYCGRG 2 cut(s) 490, 1066
AvaII GGWCC 1 cut(s) 1176
BalI TGGCCA 1 cut(s) 1145
BanI GGYRCC 1 cut(s) 122
BauI CACGAG 1 cut(s) 374
Bbv12I GWGCWC 1 cut(s) 854
BbvI GCAGC 5 cut(s) 53, 656, 738, 869, 1465
BccI CCATC 7 cut(s) 56, 62, 432, 461, 511, 1130, 1462
BceAI ACGGC 1 cut(s) 696
BciT130I CCWGG 1 cut(s) 1181
BciVI GTATCC 1 cut(s) 1513
BcnI CCSGG 2 cut(s) 491, 492
BcoDI GTCTC 1 cut(s) 247
BfaI CTAG 5 cut(s) 221, 264, 363, 528, 929
BfmI CTRYAG 2 cut(s) 642, 1479
BfoI RGCGCY 2 cut(s) 126, 182
BfrI CTTAAG 1 cut(s) 1163
BfuAI ACCTGC 1 cut(s) 1213
BfuI GTATCC 1 cut(s) 1513
BisI GCNGC 6 cut(s) 67, 121, 645, 727, 858, 1479
BlpI GCTNAGC 1 cut(s) 853
BlsI GCNGC 6 cut(s) 68, 122, 646, 728, 859, 1480
BmcAI AGTACT 1 cut(s) 836
Bme1390I CCNGG 3 cut(s) 491, 492, 1181
Bme18I GGWCC 1 cut(s) 1176
BmeT110I CYCGRG 2 cut(s) 490, 1066
BmgT120I GGNCC 1 cut(s) 1176
BmiI GGNNCC 4 cut(s) 52, 124, 1026, 1178
BmrFI CCNGG 3 cut(s) 491, 492, 1181
BmsI GCATC 5 cut(s) 89, 366, 692, 1005, 1246
Bpu10I CCTNAGC 1 cut(s) 1172
Bpu1102I GCTNAGC 1 cut(s) 853
BpuEI CTTGAG 2 cut(s) 112, 123
BpuMI CCSGG 2 cut(s) 491, 492
BsaHI GRCGYC 2 cut(s) 123, 387
BsaJI CCNNGG 4 cut(s) 10, 490, 792, 1179
BsaXI ACNNNNNCTCC 2 cut(s) 750, 780
Bsc4I CCNNNNNNNGG 2 cut(s) 1118, 1185
Bse1I ACTGG 3 cut(s) 250, 528, 787
Bse3DI GCAATG 1 cut(s) 769
BseBI CCWGG 1 cut(s) 1181
BseDI CCNNGG 4 cut(s) 10, 490, 792, 1179
BseLI CCNNNNNNNGG 2 cut(s) 1118, 1185
BseMI GCAATG 1 cut(s) 769
BseMII CTCAG 6 cut(s) 333, 406, 672, 867, 918, 1331
BseNI ACTGG 3 cut(s) 250, 528, 787
BsePI GCGCGC 1 cut(s) 688
BseXI GCAGC 5 cut(s) 53, 656, 738, 869, 1465
BseYI CCCAGC 1 cut(s) 1031
Bsh1236I CGCG 2 cut(s) 688, 690
BshFI GGCC 2 cut(s) 988, 1145
BshNI GGYRCC 1 cut(s) 122
BsiHKAI GWGCWC 1 cut(s) 854
BsiHKCI CYCGRG 2 cut(s) 490, 1066
BsiSI CCGG 1 cut(s) 491
BslFI GGGAC 5 cut(s) 534, 875, 1162, 1344, 1359
BslI CCNNNNNNNGG 2 cut(s) 1118, 1185
BsmAI GTCTC 1 cut(s) 247
BsmFI GGGAC 5 cut(s) 534, 875, 1162, 1344, 1359
BsmI GAATGC 3 cut(s) 175, 806, 1415
BsnI GGCC 2 cut(s) 988, 1145
BsoBI CYCGRG 2 cut(s) 490, 1066
Bsp1286I GDGCHC 1 cut(s) 854
Bsp143I GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
Bsp1720I GCTNAGC 1 cut(s) 853
Bsp19I CCATGG 2 cut(s) 10, 792
BspACI CCGC 1 cut(s) 120
BspANI GGCC 2 cut(s) 988, 1145
BspCNI CTCAG 6 cut(s) 334, 405, 671, 866, 917, 1330
BspFNI CGCG 2 cut(s) 688, 690
BspLI GGNNCC 4 cut(s) 52, 124, 1026, 1178
BspMAI CTGCAG 2 cut(s) 646, 1483
BspMI ACCTGC 1 cut(s) 1213
BspPI GGATC 2 cut(s) 208, 1103
BspT107I GGYRCC 1 cut(s) 122
BspTI CTTAAG 1 cut(s) 1163
BsrDI GCAATG 1 cut(s) 769
BsrI ACTGG 3 cut(s) 250, 528, 787
BssECI CCNNGG 4 cut(s) 10, 490, 792, 1179
BssHII GCGCGC 1 cut(s) 688
BssMI GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
BssNI GRCGYC 2 cut(s) 123, 387
BssSI CACGAG 1 cut(s) 374
BssT1I CCWWGG 2 cut(s) 10, 792
Bst2BI CACGAG 1 cut(s) 374
Bst2UI CCWGG 1 cut(s) 1181
Bst4CI ACNGT 7 cut(s) 582, 598, 1024, 1042, 1081, 1242, 1513
Bst6I CTCTTC 3 cut(s) 1263, 1349, 1458
BstACI GRCGYC 2 cut(s) 123, 387
BstAFI CTTAAG 1 cut(s) 1163
BstAPI GCANNNNNTGC 1 cut(s) 575
BstC8I GCNNGC 4 cut(s) 6, 559, 690, 850
BstDEI CTNAG 8 cut(s) 296, 342, 392, 658, 853, 904, 1172, 1317
BstDSI CCRYGG 2 cut(s) 10, 792
BstFNI CGCG 2 cut(s) 688, 690
BstH2I RGCGCY 2 cut(s) 126, 182
BstHHI GCGC 5 cut(s) 125, 181, 690, 692, 752
BstKTI GATC 6 cut(s) 36, 203, 322, 410, 900, 1111
BstMAI GTCTC 1 cut(s) 247
BstMBI GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
BstMWI GCNNNNNNNGC 9 cut(s) 66, 575, 689, 812, 854, 1168, 1214, 1289, 1298
BstNI CCWGG 1 cut(s) 1181
BstNSI RCATGY 4 cut(s) 8, 329, 578, 1505
BstSCI CCNGG 3 cut(s) 489, 490, 1179
BstSFI CTRYAG 2 cut(s) 642, 1479
BstUI CGCG 2 cut(s) 688, 690
BstV1I GCAGC 5 cut(s) 53, 656, 738, 869, 1465
BsuI GTATCC 1 cut(s) 1513
BsuRI GGCC 2 cut(s) 988, 1145
BtgI CCRYGG 2 cut(s) 10, 792
BtgZI GCGATG 2 cut(s) 75, 669
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 4 cut(s) 180, 400, 578, 666
BveI ACCTGC 1 cut(s) 1213
Cac8I GCNNGC 4 cut(s) 6, 559, 690, 850
CfoI GCGC 5 cut(s) 125, 181, 690, 692, 752
Cfr13I GGNCC 1 cut(s) 1176
Cfr9I CCCGGG 1 cut(s) 490
CseI GACGC 1 cut(s) 143
Csp6I GTAC 4 cut(s) 187, 780, 835, 1433
CviQI GTAC 4 cut(s) 187, 780, 835, 1433
DdeI CTNAG 8 cut(s) 296, 342, 392, 658, 853, 904, 1172, 1317
DinI GGCGCC 1 cut(s) 124
DpnI GATC 6 cut(s) 35, 202, 321, 409, 899, 1110
DpnII GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
EaeI YGGCCR 1 cut(s) 1143
Eam1104I CTCTTC 3 cut(s) 1263, 1349, 1458
EarI CTCTTC 3 cut(s) 1263, 1349, 1458
Eco130I CCWWGG 2 cut(s) 10, 792
Eco47I GGWCC 1 cut(s) 1176
Eco57I CTGAAG 1 cut(s) 851
Eco88I CYCGRG 2 cut(s) 490, 1066
EcoO109I RGGNCCY 1 cut(s) 1176
EcoRI GAATTC 1 cut(s) 953
EcoRII CCWGG 1 cut(s) 1179
EcoT14I CCWWGG 2 cut(s) 10, 792
EcoT22I ATGCAT 1 cut(s) 6
EgeI GGCGCC 1 cut(s) 124
EheI GGCGCC 1 cut(s) 124
ErhI CCWWGG 2 cut(s) 10, 792
FaqI GGGAC 5 cut(s) 534, 875, 1162, 1344, 1359
FblI GTMKAC 2 cut(s) 1076, 1399
Fnu4HI GCNGC 6 cut(s) 67, 121, 645, 727, 858, 1479
Fsp4HI GCNGC 6 cut(s) 67, 121, 645, 727, 858, 1479
FspBI CTAG 5 cut(s) 221, 264, 363, 528, 929
GlaI GCGC 5 cut(s) 124, 180, 689, 691, 751
GluI GCNGC 6 cut(s) 67, 121, 645, 727, 858, 1479
GsaI CCCAGC 1 cut(s) 1035
HaeII RGCGCY 2 cut(s) 126, 182
HaeIII GGCC 2 cut(s) 988, 1145
HapII CCGG 1 cut(s) 491
HgaI GACGC 1 cut(s) 143
HhaI GCGC 5 cut(s) 125, 181, 690, 692, 752
Hin1I GRCGYC 2 cut(s) 123, 387
Hin6I GCGC 5 cut(s) 123, 179, 688, 690, 750
HinP1I GCGC 5 cut(s) 123, 179, 688, 690, 750
HincII GTYRAC 2 cut(s) 967, 1077
HindII GTYRAC 2 cut(s) 967, 1077
HindIII AAGCTT 1 cut(s) 1290
HinfI GANTC 3 cut(s) 379, 888, 902
HpaII CCGG 1 cut(s) 491
HphI GGTGA 6 cut(s) 260, 343, 889, 932, 1133, 1204
Hpy166II GTNNAC 5 cut(s) 601, 940, 967, 1077, 1400
Hpy188I TCNGA 5 cut(s) 343, 593, 634, 844, 907
Hpy188III TCNNGA 6 cut(s) 28, 140, 376, 383, 1068, 1304
Hpy8I GTNNAC 5 cut(s) 601, 940, 967, 1077, 1400
HpyAV CCTTC 3 cut(s) 501, 911, 990
HpyCH4III ACNGT 7 cut(s) 582, 598, 1024, 1042, 1081, 1242, 1513
HpyCH4IV ACGT 4 cut(s) 387, 936, 963, 1370
HpyCH4V TGCA 9 cut(s) 4, 154, 173, 461, 578, 644, 1217, 1481, 1501
HpyF10VI GCNNNNNNNGC 9 cut(s) 66, 575, 689, 812, 854, 1168, 1214, 1289, 1298
HpyF3I CTNAG 8 cut(s) 296, 342, 392, 658, 853, 904, 1172, 1317
HpySE526I ACGT 4 cut(s) 387, 936, 963, 1370
Hsp92I GRCGYC 2 cut(s) 123, 387
HspAI GCGC 5 cut(s) 123, 179, 688, 690, 750
KasI GGCGCC 1 cut(s) 122
Kzo9I GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
LmnI GCTCC 1 cut(s) 50
Lsp1109I GCAGC 5 cut(s) 53, 656, 738, 869, 1465
LweI GCATC 5 cut(s) 89, 366, 692, 1005, 1246
MaeI CTAG 5 cut(s) 221, 264, 363, 528, 929
MaeII ACGT 4 cut(s) 387, 936, 963, 1370
MaeIII GTNAC 4 cut(s) 131, 328, 1092, 1504
MalI GATC 6 cut(s) 35, 202, 321, 409, 899, 1110
MboI GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
MboII GAAGA 8 cut(s) 28, 994, 1265, 1280, 1363, 1366, 1475, 1502
MhlI GDGCHC 1 cut(s) 854
MlsI TGGCCA 1 cut(s) 1145
MluCI AATT 6 cut(s) 627, 953, 1083, 1153, 1360, 1377
MluNI TGGCCA 1 cut(s) 1145
Mly113I GGCGCC 1 cut(s) 123
MlyI GAGTC 2 cut(s) 896, 897
MmeI TCCRAC 1 cut(s) 215
Mox20I TGGCCA 1 cut(s) 1145
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 402, 836
MscI TGGCCA 1 cut(s) 1145
MseI TTAA 2 cut(s) 1014, 1164
MslI CAYNNNNRTG 2 cut(s) 9, 1134
Msp20I TGGCCA 1 cut(s) 1145
MspA1I CMGCKG 1 cut(s) 1031
MspCI CTTAAG 1 cut(s) 1163
MspI CCGG 1 cut(s) 491
MspR9I CCNGG 3 cut(s) 491, 492, 1181
Mva1269I GAATGC 3 cut(s) 175, 806, 1415
MvaI CCWGG 1 cut(s) 1181
MvnI CGCG 2 cut(s) 688, 690
MwoI GCNNNNNNNGC 9 cut(s) 66, 575, 689, 812, 854, 1168, 1214, 1289, 1298
NarI GGCGCC 1 cut(s) 123
NciI CCSGG 2 cut(s) 491, 492
NcoI CCATGG 2 cut(s) 10, 792
NdeII GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
NlaIV GGNNCC 4 cut(s) 52, 124, 1026, 1178
NmuCI GTSAC 3 cut(s) 131, 328, 1504
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 8, 329, 578, 1505
PaeI GCATGC 1 cut(s) 8
PauI GCGCGC 1 cut(s) 688
PciI ACATGT 1 cut(s) 325
PcsI WCGNNNNNNNCGW 2 cut(s) 948, 1073
PctI GAATGC 3 cut(s) 175, 806, 1415
PdmI GAANNNNTTC 2 cut(s) 402, 836
PfeI GAWTC 1 cut(s) 379
PkrI GCNGC 6 cut(s) 68, 122, 646, 728, 859, 1480
PleI GAGTC 2 cut(s) 896, 896
PluTI GGCGCC 1 cut(s) 126
PpsI GAGTC 2 cut(s) 896, 896
PpuMI RGGWCCY 1 cut(s) 1176
PscI ACATGT 1 cut(s) 325
PsiI TTATAA 1 cut(s) 770
Psp1406I AACGTT 1 cut(s) 936
Psp5II RGGWCCY 1 cut(s) 1176
Psp6I CCWGG 1 cut(s) 1179
PspFI CCCAGC 1 cut(s) 1031
PspGI CCWGG 1 cut(s) 1179
PspN4I GGNNCC 4 cut(s) 52, 124, 1026, 1178
PspPI GGNCC 1 cut(s) 1176
PspPPI RGGWCCY 1 cut(s) 1176
PstI CTGCAG 2 cut(s) 646, 1483
PteI GCGCGC 1 cut(s) 688
PvuII CAGCTG 1 cut(s) 1031
RsaI GTAC 4 cut(s) 188, 781, 836, 1434
RsaNI GTAC 4 cut(s) 187, 780, 835, 1433
RseI CAYNNNNRTG 2 cut(s) 9, 1134
SalI GTCGAC 1 cut(s) 1075
SaqAI TTAA 2 cut(s) 1014, 1164
SatI GCNGC 6 cut(s) 67, 121, 645, 727, 858, 1479
Sau3AI GATC 6 cut(s) 33, 200, 319, 407, 897, 1108
Sau96I GGNCC 1 cut(s) 1176
ScaI AGTACT 1 cut(s) 836
SchI GAGTC 2 cut(s) 896, 897
ScrFI CCNGG 3 cut(s) 491, 492, 1181
SduI GDGCHC 1 cut(s) 854
SfaNI GCATC 5 cut(s) 89, 366, 692, 1005, 1246
SfcI CTRYAG 2 cut(s) 642, 1479
SfoI GGCGCC 1 cut(s) 124
SinI GGWCC 1 cut(s) 1176
SmaI CCCGGG 1 cut(s) 492
SmiMI CAYNNNNRTG 2 cut(s) 9, 1134
SmlI CTYRAG 3 cut(s) 127, 138, 1163
SmoI CTYRAG 3 cut(s) 127, 138, 1163
SphI GCATGC 1 cut(s) 8
Sse9I AATT 6 cut(s) 627, 953, 1083, 1153, 1360, 1377
SsiI CCGC 1 cut(s) 120
SspDI GGCGCC 1 cut(s) 122
SspI AATATT 1 cut(s) 870
SspMI CTAG 5 cut(s) 221, 264, 363, 528, 929
StyD4I CCNGG 3 cut(s) 489, 490, 1179
StyI CCWWGG 2 cut(s) 10, 792
TaaI ACNGT 7 cut(s) 582, 598, 1024, 1042, 1081, 1242, 1513
TaiI ACGT 4 cut(s) 390, 939, 966, 1373
TaqI TCGA 6 cut(s) 18, 97, 406, 900, 951, 1076
TasI AATT 6 cut(s) 627, 953, 1083, 1153, 1360, 1377
TatI WGTACW 2 cut(s) 186, 834
TauI GCSGC 1 cut(s) 123
TfiI GAWTC 1 cut(s) 379
Tru1I TTAA 2 cut(s) 1014, 1164
Tru9I TTAA 2 cut(s) 1014, 1164
TscAI CASTG 4 cut(s) 180, 400, 585, 666
TseFI GTSAC 3 cut(s) 131, 328, 1504
TseI GCWGC 5 cut(s) 66, 644, 726, 857, 1478
Tsp45I GTSAC 3 cut(s) 131, 328, 1504
TspDTI ATGAA 5 cut(s) 558, 700, 1300, 1408, 1461
TspGWI ACGGA 4 cut(s) 456, 519, 898, 957
TspMI CCCGGG 1 cut(s) 490
TspRI CASTG 4 cut(s) 180, 400, 585, 666
Vha464I CTTAAG 1 cut(s) 1163
VpaK11BI GGWCC 1 cut(s) 1176
XapI RAATTY 1 cut(s) 953
XceI RCATGY 4 cut(s) 8, 329, 578, 1505
XcmI CCANNNNNNNNNTGG 1 cut(s) 799
XmaI CCCGGG 1 cut(s) 490
XmiI GTMKAC 2 cut(s) 1076, 1399
XmnI GAANNNNTTC 2 cut(s) 402, 836
XspI CTAG 5 cut(s) 221, 264, 363, 528, 929
ZraI GACGTC 1 cut(s) 388
ZrmI AGTACT 1 cut(s) 836
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.