Rw2G051030

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
78708693 .. 78714138
5446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G051030.1

Sequence Viewer

Length: 3741 bp
ATGGAAGACAAAATGGAGAGCAAGAAGAAAGCTGGCTCTTCTATACGCTCCGTTTTCATGCACGCTGATGGTGTTGATAAACTCTTGATGGCGTTGGGGCTGTTCGGAAGCATCGGAGACGGCTGCACAACGCCTCTGGTCTTGTTGATCACTAGCCGCTTGATGAACAATGTCGGCGGCGCCTCATCCAACGCTCAAGATGCTTTCTTGCATAGCATCAATAAGAATGCAGTGGCGCTATTGTACTTGGCTTCTGCATCATTTGTTTGTTGCTTCCTAGAGGGATATTCTTGGACAAGAACTGGTGAGAGACAAGCAGCTAGAATGAGAGTAAGATATTTGAAAGCAGTGTTAAGACAAGATGTGGGCTACTTTGATTTGCATGTCACAAGCACCTCAGAGGTTATCACCAGCGTCTCTAGTGATAGCCTTGTCATTCAAGACGTCCTTAGTGAAAAGGTGCCAAACTTTGTAATGAACTGCTCTATGTTCCTTGGGAGCTATGTTGCGGCGTTCATAATGCTGTGGAGGCTAGCCATCGTTGGGTTTCCGTTTGTGGTGCTTCTGGTGATTCCGGGTTTGATATACGGACGGACTTTGATGGGACTGGCTAGGCAGATTAGAGATGAATACACCAAGGCTGGCACAATAGCAGAACAGGCACTGTCATCAATTAGAACCGTGTATGCATTTGTTGGAGAAAAGAAGACTATAACAGAGTTCTCTGCAGCTCTACAAGGCTCAGTGAAGTTGGGGTTGAGTCAGGGCCTGGCAAAAGGCTTGGCCATTGGAAGCAACGGTGTCGTTTTCGCGATTTGGTCGTTCATGTCCTACTATGGCAGCAGAATGGTCATGTACCATGGCGCTAAGGGAGGCACTGTTTTCGCTGTTGGTGCTGCAATAGCTGTTGGTGGATTGGCATTGGGCGCAGGCTTATCAAACTTGAAGTACTTCTCAGAAGCGTGTTCAGCCGCTGAACGAATAATGGAGGTGATTCGGAGAGTCCCCAAGATCGATTCAGACAACATGGAAGGAGAAATACTAGAGAACGTTTTAGGGGAAGTTGAATTCAAGCACGTAGAATTCGCCTACCCGTCAAGGCCAGAAAGCATTATCTTCAAAGACTTCAACTTAACGGTTCCAGCTGGGAAAACAGTGGCATTGGTGGGTGGTAGTGGCTCCGGAAAATCGACAGTGATTTCGCTGTTGCAGAGATTTTATGATCCACTCGGGGGAGAGATTCTCATTGATGGGGTGGCCATAAACAAGTGTCAGCTCAAGTGGTTGAGGTCACAGATGGGACTGGTGAGCCAAGAGCCTGCTCTGTTTGCAACCAGCATAAAAGAGAACATACTTTTTGGGAAAGAAGATGCTACCATTGAAGAGGTTATTGAGGCTGGTAAAGCTTCTAATGCTGACAATTTCATCTCTCAGTTGCCTCTGGGATATGACACACAGGTTGGCGAGAGAGGTGTTCAAATGTCGGGAGGGCAGAAGCAAAGAATAGCCATTGCCCGAGCAATCATCAAGAAACCACGCATCCTTCTTCTAGATGAAGCCACGAGCGCATTGGACTCCGAATCGGAGCGTGTAGTTCAAGAAGCTCTTGATAAAGCAGCTGTCGGACGTACGACGATAATCATCGCCCACCGCCTCTCTACCATCCGAAACGCCGACGTCATTACTGTCGTTCAAAACGGGCAGGTCATGGAGACGGGCTCACACAACGAGCTATTCCAACGTGAAAATGGTCTATATACCTCGCTTGTCCGCTTACAACAAACAGAGAAGCAAAGAGGACCAGAAGAGCAAGGACATTACGCATCGTCATCTATATCAAACTTGGACATTCACAACACAAGCAGTCGTAGGCTTTCTATGGTCAGCCGCTCAAGTTCTGCTAACTCATTTGCGCAAGGTCGAGCTTCATCAGTGGTTGCTGGGGAAGATGAGATCGTAGAAGGGCAGAAGCTGCCTGTCCCATCTTTTCGGAGATTGATAGCTTTGAACCTTCCGGAGTGGAAACAAGCGCTTTTGGGGTGCTTCAGTGCGGTCCTTTTTGGTGCAGTTCAGCCAGCATATGCATTTGCTATGGGGTCAATGGTGTCGGTTTATTTCTTGACAGATCACGATGAGATCAAGGAGAAGACGAGGATTTATTCACTTTGCTTTGGATTTATTCACTTTGCTTTCTGGGGTTGGCTATTTTCTCTTTGCTGGTTAAACATTTGCCAGCATTACAACTTTGCCTACATGGGAGAGTACTTGACTAAGAGAGTTAGAGGAGGATGCTTTCCAAGATTCTTACATTCGAAGTGTGGTGGTTTGATCAAGATGAGAATTCCAGTGGTGAGATCTTTAGTGGGTGATCGGATGGCTCTACTTGTTCAAACTTTCTCAGCTGTGACTGTAGCCTGCACAATGGGTTTGGTCATTGCATGGAGACTTGCCTCAGTTATGATAGCAGTACAACCCATTATCATTGTGAGCTACTACACCAGGCGTGTCCTGCTCAAAAGTATGTCCAGGAAAGCCATCAAAGCTCAAGATGAAAGCAGCAAGCTAGCTGCAGAAGCAGTCTCCAACCTCAGAACCATCACTGCCTTCTCATCTCAGGACCGTCTGTTGAAAATGCTCGAAAAGGCCCAAGAAGGCCCACGTAAGGAAAGCATCCGACAATCGTGGTTTGCGGGGATTGGGCTTGGTTGTTCTCAAAGCCTTACCACTATCACCTGGGCTTTTGACTTTTGGTACGGAGGCAAGCTCGTTGCCAAGGGCTACGTCACAGCAAAAGCTCTTTTTGAGACTTTCATGATATTGGTGAGCACTGGCCGGGTTATTGCCGATGCCGGAAGCATGACTTCAGATCTTGCGAAAGGGTCGGATGCTGTTGCGTCCGTATTTGCCGTGTTGGACCGGTACACAAAAATAGAACCCGAAGACCCGGAAGGTTGCGAGCCCAAAAGAATAACCGGTCACATAGAACTTCGTAACGTACATTTTGCATACCCTGCTAGGCCTGATGTGATGATTTTCAAAGGATTCTCAATCAAAATCGAAGCTGGAAAATCAACTGCGTTGGTGGGACAAAGCGGGTCTGGAAAGTCAACAATCATTGGATTAATCGAAAGATTTTATGATCCATTAAAAGGAGAAGTGATAATTGACGGTCGAGACACGAAATCGTACCACCTCAGGTCATTAAGGAAACATATAGCACTTGTTAGCCAAGAGCCAACGTTATTTTTAGGTACCATAAGAGAGAACATCATGTATGGCATGTCGGATAAGATTGACGAATTGGAGATAATCGAAGCAGCGAAGGCAGCCAACGCTCATGATTTCATTTCAAGCCTCAAGGAGGGATATGACACTTCATGTGGAGACAGAGGAGTGCAACTATCTGGGGGACAGAAGCAACGCATTGCTATAGCGAGAGCTATATTGAGAAACCCAGTGGTGTTACTATTAGATGAGGCGACCAGTGCGCTTGATAGTCAGTCGGAAAAGGTGGTGCAAGACGCGCTAGAGCGGGTGATGGTGGGGAGGACTAGTGTGGTGGTGGCGCACAGGTTGAGTACCATACAACACTGTGATCTTATCACAGTACTTGATAAAGGGAGGGTAGTGGAGAAAGGGACTCACTCATCTCTTTTGGCCAAAGGGCCTAAAGGTTCTTACTACTCATTGGTTAGCTTGCAAAGGACGCCATCTGCATCAGATCTTACTAAATTGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

1246

Amino Acids

136.08

Weight (kDa)

9.01

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 31 - 297 2.7e-47 ABC transporter transmembrane region
ABC_tran PF00005 374 - 522 1.3e-33 ABC transporter
ABC_membrane PF00664 678 - 941 1.4e-25 ABC transporter transmembrane region
ABC_tran PF00005 1013 - 1162 3.9e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 447, 1680
Acc16I TGCGCA 1 cut(s) 1914
Acc36I ACCTGC 1 cut(s) 1693
Acc65I GGTACC 1 cut(s) 3251
AccB1I GGYRCC 3 cut(s) 179, 460, 3251
AccBSI CCGCTC 2 cut(s) 1890, 3532
AccII CGCG 2 cut(s) 812, 3524
AccIII TCCGGA 2 cut(s) 1181, 2014
AclI AACGTT 2 cut(s) 1050, 3239
AclWI GGATC 2 cut(s) 1217, 3134
AcoI YGGCCR 4 cut(s) 783, 1257, 2830, 3657
AcsI RAATTY 3 cut(s) 1067, 1082, 2340
AcuI CTGAAG 2 cut(s) 2029, 2847
AcyI GRCGYC 4 cut(s) 180, 444, 1677, 3707
AfeI AGCGCT 1 cut(s) 2031
AfiI CCNNNNNNNGG 5 cut(s) 543, 1232, 2662, 3149, 3361
AgeI ACCGGT 2 cut(s) 2916, 2972
AhlI ACTAGT 1 cut(s) 3551
AjnI CCWGG 4 cut(s) 768, 2498, 2525, 2732
Alw21I GWGCWC 1 cut(s) 2828
Alw26I GTCTC 9 cut(s) 111, 304, 421, 1706, 2437, 2584, 2798, 3168, 3378
AlwI GGATC 2 cut(s) 1217, 3134
AlwNI CAGNNNCTG 4 cut(s) 664, 769, 974, 1972
Ama87I CYCGRG 2 cut(s) 1229, 1515
Aor13HI TCCGGA 2 cut(s) 1181, 2014
Aor51HI AGCGCT 1 cut(s) 2031
ApoI RAATTY 3 cut(s) 1067, 1082, 2340
ArsI GACNNNNNNTTYG 2 cut(s) 1183, 1215
AseI ATTAAT 1 cut(s) 3122
AsiGI ACCGGT 2 cut(s) 2916, 2972
Asp700I GAANNNNTTC 1 cut(s) 950
Asp718I GGTACC 1 cut(s) 3251
AspS9I GGNCC 8 cut(s) 766, 1799, 2053, 2617, 2644, 2654, 2914, 3665
AsuC2I CCSGG 3 cut(s) 576, 2834, 2945
AsuII TTCGAA 1 cut(s) 2312
AsuNHI GCTAGC 2 cut(s) 532, 2563
AvaI CYCGRG 2 cut(s) 1229, 1515
AvaII GGWCC 4 cut(s) 1799, 2053, 2617, 2914
AxyI CCTNAGG 1 cut(s) 3194
BalI TGGCCA 3 cut(s) 785, 1259, 3659
BanI GGYRCC 3 cut(s) 179, 460, 3251
BanII GRGCYC 2 cut(s) 1721, 2961
BarI GAAGNNNNNNTAC 2 cut(s) 1023, 1055
BauI CACGAG 1 cut(s) 1561
BbsI GAAGAC 4 cut(s) 12, 713, 2153, 2946
Bbv12I GWGCWC 1 cut(s) 2828
BceAI ACGGC 2 cut(s) 136, 2891
BcgI CGANNNNNNTGC 4 cut(s) 784, 818, 865, 899
BciT130I CCWGG 4 cut(s) 770, 2500, 2527, 2734
BclI TGATCA 2 cut(s) 147, 2328
BcnI CCSGG 3 cut(s) 576, 2834, 2945
BcoDI GTCTC 9 cut(s) 111, 304, 421, 1706, 2437, 2584, 2798, 3168, 3378
BcuI ACTAGT 1 cut(s) 3551
BfmI CTRYAG 4 cut(s) 726, 2409, 2568, 3429
BfoI RGCGCY 4 cut(s) 183, 239, 867, 2033
BfuAI ACCTGC 1 cut(s) 1693
BglII AGATCT 3 cut(s) 2354, 2866, 3721
BmcAI AGTACT 3 cut(s) 950, 2264, 3609
Bme1390I CCNGG 7 cut(s) 576, 770, 2500, 2527, 2734, 2834, 2945
Bme18I GGWCC 4 cut(s) 1799, 2053, 2617, 2914
BmeT110I CYCGRG 2 cut(s) 1229, 1515
BmgT120I GGNCC 8 cut(s) 766, 1799, 2053, 2617, 2644, 2654, 2914, 3665
BmiI GGNNCC 5 cut(s) 181, 462, 1140, 1180, 3253
BmrFI CCNGG 7 cut(s) 576, 770, 2500, 2527, 2734, 2834, 2945
BmrI ACTGGG 1 cut(s) 3449
BmtI GCTAGC 2 cut(s) 536, 2567
BmuI ACTGGG 1 cut(s) 3449
BpiI GAAGAC 4 cut(s) 12, 713, 2153, 2946
BplI GAGNNNNNCTC 6 cut(s) 1227, 1259, 1703, 1735, 2748, 2780
Bpu10I CCTNAGC 1 cut(s) 867
Bpu14I TTCGAA 1 cut(s) 2312
BpuEI CTTGAG 5 cut(s) 180, 1262, 1876, 2529, 3341
BpuMI CCSGG 3 cut(s) 576, 2834, 2945
Bsa29I ATCGAT 1 cut(s) 1014
BsaAI YACGTR 2 cut(s) 1078, 2660
BsaBI GATNNNNATC 1 cut(s) 1640
BsaHI GRCGYC 4 cut(s) 180, 444, 1677, 3707
BsaJI CCNNGG 5 cut(s) 493, 636, 859, 2733, 2772
BsaWI WCCGGW 4 cut(s) 1181, 2014, 2916, 2972
BsaXI ACNNNNNCTCC 4 cut(s) 864, 894, 3538, 3568
Bsc4I CCNNNNNNNGG 5 cut(s) 543, 1232, 2662, 3149, 3361
Bse118I RCCGGY 2 cut(s) 2916, 2972
Bse1I ACTGG 7 cut(s) 307, 612, 1308, 2345, 2833, 3455, 3483
Bse21I CCTNAGG 1 cut(s) 3194
Bse3DI GCAATG 3 cut(s) 1509, 2433, 3423
Bse8I GATNNNNATC 1 cut(s) 1640
BseAI TCCGGA 2 cut(s) 1181, 2014
BseBI CCWGG 4 cut(s) 770, 2500, 2527, 2734
BseCI ATCGAT 1 cut(s) 1014
BseDI CCNNGG 5 cut(s) 493, 636, 859, 2733, 2772
BseGI GGATG 7 cut(s) 185, 1539, 1662, 2294, 2379, 2670, 2890
BseJI GATNNNNATC 1 cut(s) 1640
BseLI CCNNNNNNNGG 5 cut(s) 543, 1232, 2662, 3149, 3361
BseMI GCAATG 3 cut(s) 1509, 2433, 3423
BseMII CTCAG 9 cut(s) 411, 756, 969, 1445, 2412, 2466, 2602, 2627, 3208
BseNI ACTGG 7 cut(s) 307, 612, 1308, 2345, 2833, 3455, 3483
BseRI GAGGAG 2 cut(s) 2298, 3405
BseYI CCCAGC 2 cut(s) 1145, 1940
BsgI GTGCAG 3 cut(s) 109, 2085, 2401
Bsh1236I CGCG 2 cut(s) 812, 3524
Bsh1285I CGRYCG 1 cut(s) 3172
BshNI GGYRCC 3 cut(s) 179, 460, 3251
BshTI ACCGGT 2 cut(s) 2916, 2972
BshVI ATCGAT 1 cut(s) 1014
BsiEI CGRYCG 1 cut(s) 3172
BsiHKAI GWGCWC 1 cut(s) 2828
BsiHKCI CYCGRG 2 cut(s) 1229, 1515
BsiSI CCGG 8 cut(s) 575, 1182, 2015, 2833, 2850, 2917, 2945, 2973
BsiWI CGTACG 1 cut(s) 1628
BslFI GGGAC 7 cut(s) 618, 989, 1314, 1964, 3099, 3423, 3652
BslI CCNNNNNNNGG 5 cut(s) 543, 1232, 2662, 3149, 3361
BsmAI GTCTC 9 cut(s) 111, 304, 421, 1706, 2437, 2584, 2798, 3168, 3378
BsmBI CGTCTC 3 cut(s) 111, 421, 1706
BsmFI GGGAC 7 cut(s) 618, 989, 1314, 1964, 3099, 3423, 3652
BsmI GAATGC 1 cut(s) 232
BsoBI CYCGRG 2 cut(s) 1229, 1515
Bsp119I TTCGAA 1 cut(s) 2312
Bsp1286I GDGCHC 3 cut(s) 1721, 2828, 2961
Bsp13I TCCGGA 2 cut(s) 1181, 2014
Bsp19I CCATGG 1 cut(s) 859
Bsp68I TCGCGA 1 cut(s) 812
BspCNI CTCAG 9 cut(s) 410, 755, 968, 1444, 2411, 2465, 2601, 2626, 3207
BspDI ATCGAT 1 cut(s) 1014
BspEI TCCGGA 2 cut(s) 1181, 2014
BspFNI CGCG 2 cut(s) 812, 3524
BspHI TCATGA 2 cut(s) 2811, 3337
BspLI GGNNCC 5 cut(s) 181, 462, 1140, 1180, 3253
BspMAI CTGCAG 2 cut(s) 730, 2572
BspMI ACCTGC 1 cut(s) 1693
BspOI GCTAGC 2 cut(s) 536, 2567
BspPI GGATC 2 cut(s) 1217, 3134
BspQI GCTCTTC 2 cut(s) 43, 1800
BspT104I TTCGAA 1 cut(s) 2312
BspT107I GGYRCC 3 cut(s) 179, 460, 3251
BsrBI CCGCTC 2 cut(s) 1890, 3532
BsrDI GCAATG 3 cut(s) 1509, 2433, 3423
BsrFI RCCGGY 2 cut(s) 2916, 2972
BsrI ACTGG 7 cut(s) 307, 612, 1308, 2345, 2833, 3455, 3483
BssAI RCCGGY 2 cut(s) 2916, 2972
BssECI CCNNGG 5 cut(s) 493, 636, 859, 2733, 2772
BssNI GRCGYC 4 cut(s) 180, 444, 1677, 3707
BssSI CACGAG 1 cut(s) 1561
BssT1I CCWWGG 4 cut(s) 493, 636, 859, 2772
Bst2BI CACGAG 1 cut(s) 1561
Bst2UI CCWGG 4 cut(s) 770, 2500, 2527, 2734
Bst6I CTCTTC 3 cut(s) 43, 1377, 1800
BstACI GRCGYC 4 cut(s) 180, 444, 1677, 3707
BstAPI GCANNNNNTGC 2 cut(s) 1972, 3011
BstBAI YACGTR 2 cut(s) 1078, 2660
BstBI TTCGAA 1 cut(s) 2312
BstDSI CCRYGG 1 cut(s) 859
BstENI CCTNNNNNAGG 1 cut(s) 3359
BstF5I GGATG 7 cut(s) 185, 1539, 1662, 2294, 2379, 2670, 2890
BstFNI CGCG 2 cut(s) 812, 3524
BstH2I RGCGCY 4 cut(s) 183, 239, 867, 2033
BstMAI GTCTC 9 cut(s) 111, 304, 421, 1706, 2437, 2584, 2798, 3168, 3378
BstMCI CGRYCG 1 cut(s) 3172
BstNI CCWGG 4 cut(s) 770, 2500, 2527, 2734
BstNSI RCATGY 2 cut(s) 386, 3283
BstSCI CCNGG 7 cut(s) 574, 768, 2498, 2525, 2732, 2832, 2943
BstSFI CTRYAG 4 cut(s) 726, 2409, 2568, 3429
BstUI CGCG 2 cut(s) 812, 3524
BstV2I GAAGAC 4 cut(s) 12, 713, 2153, 2946
BstX2I RGATCY 3 cut(s) 2354, 2866, 3721
BstYI RGATCY 3 cut(s) 2354, 2866, 3721
Bsu15I ATCGAT 1 cut(s) 1014
Bsu36I CCTNAGG 1 cut(s) 3194
BsuTUI ATCGAT 1 cut(s) 1014
BtgI CCRYGG 1 cut(s) 859
BtgZI GCGATG 1 cut(s) 1627
BtsCI GGATG 7 cut(s) 185, 1539, 1662, 2294, 2379, 2670, 2890
BtsI GCAGTG 3 cut(s) 237, 354, 2598
BtuMI TCGCGA 1 cut(s) 812
BveI ACCTGC 1 cut(s) 1693
CaiI CAGNNNCTG 4 cut(s) 664, 769, 974, 1972
CciI TCATGA 2 cut(s) 2811, 3337
Cfr10I RCCGGY 2 cut(s) 2916, 2972
Cfr13I GGNCC 8 cut(s) 766, 1799, 2053, 2617, 2644, 2654, 2914, 3665
ClaI ATCGAT 1 cut(s) 1014
CseI GACGC 4 cut(s) 403, 2883, 3530, 3715
CspAI ACCGGT 2 cut(s) 2916, 2972
DinI GGCGCC 1 cut(s) 181
EaeI YGGCCR 4 cut(s) 783, 1257, 2830, 3657
Eam1104I CTCTTC 3 cut(s) 43, 1377, 1800
EarI CTCTTC 3 cut(s) 43, 1377, 1800
Eco130I CCWWGG 4 cut(s) 493, 636, 859, 2772
Eco147I AGGCCT 1 cut(s) 3019
Eco24I GRGCYC 2 cut(s) 1721, 2961
Eco47I GGWCC 4 cut(s) 1799, 2053, 2617, 2914
Eco47III AGCGCT 1 cut(s) 2031
Eco57I CTGAAG 2 cut(s) 2029, 2847
Eco81I CCTNAGG 1 cut(s) 3194
Eco88I CYCGRG 2 cut(s) 1229, 1515
EcoNI CCTNNNNNAGG 1 cut(s) 3359
EcoO109I RGGNCCY 2 cut(s) 766, 3665
EcoRI GAATTC 3 cut(s) 1067, 1082, 2340
EcoRII CCWGG 4 cut(s) 768, 2498, 2525, 2732
EcoT14I CCWWGG 4 cut(s) 493, 636, 859, 2772
EcoT22I ATGCAT 2 cut(s) 691, 2086
EcoT38I GRGCYC 2 cut(s) 1721, 2961
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
ErhI CCWWGG 4 cut(s) 493, 636, 859, 2772
Esp3I CGTCTC 3 cut(s) 111, 421, 1706
FalI AAGNNNNNCTT 6 cut(s) 432, 464, 1590, 1622, 2845, 2877
FaqI GGGAC 7 cut(s) 618, 989, 1314, 1964, 3099, 3423, 3652
FauI CCCGC 3 cut(s) 2683, 3086, 3525
FauNDI CATATG 1 cut(s) 2080
FbaI TGATCA 2 cut(s) 147, 2328
FokI GGATG 7 cut(s) 172, 1526, 1649, 2301, 2386, 2657, 2897
FriOI GRGCYC 2 cut(s) 1721, 2961
FspI TGCGCA 1 cut(s) 1914
GsaI CCCAGC 2 cut(s) 1149, 1944
HaeII RGCGCY 4 cut(s) 183, 239, 867, 2033
HapII CCGG 8 cut(s) 575, 1182, 2015, 2833, 2850, 2917, 2945, 2973
HgaI GACGC 4 cut(s) 403, 2883, 3530, 3715
Hin1I GRCGYC 4 cut(s) 180, 444, 1677, 3707
HincII GTYRAC 1 cut(s) 3108
HindII GTYRAC 1 cut(s) 3108
HindIII AAGCTT 1 cut(s) 1404
HpaII CCGG 8 cut(s) 575, 1182, 2015, 2833, 2850, 2917, 2945, 2973
Hpy166II GTNNAC 2 cut(s) 2922, 3108
Hpy8I GTNNAC 2 cut(s) 2922, 3108
Hpy99I CGWCG 2 cut(s) 1636, 1679
HpyAV CCTTC 8 cut(s) 1025, 1553, 1955, 2021, 2614, 2645, 2942, 3316
Hsp92I GRCGYC 4 cut(s) 180, 444, 1677, 3707
KasI GGCGCC 1 cut(s) 179
Kpn2I TCCGGA 2 cut(s) 1181, 2014
KpnI GGTACC 1 cut(s) 3255
Ksp22I TGATCA 2 cut(s) 147, 2328
LguI GCTCTTC 2 cut(s) 43, 1800
LmnI GCTCC 4 cut(s) 53, 498, 1184, 1585
MaeIII GTNAC 7 cut(s) 385, 1290, 2404, 2782, 2975, 2990, 3462
MbiI CCGCTC 2 cut(s) 1890, 3532
MflI RGATCY 3 cut(s) 2354, 2866, 3721
MhlI GDGCHC 3 cut(s) 1721, 2828, 2961
MlsI TGGCCA 3 cut(s) 785, 1259, 3659
MluCI AATT 8 cut(s) 672, 1067, 1082, 1420, 2340, 3162, 3299, 3731
MluNI TGGCCA 3 cut(s) 785, 1259, 3659
Mly113I GGCGCC 1 cut(s) 180
MlyI GAGTC 4 cut(s) 769, 1011, 1568, 3634
Mox20I TGGCCA 3 cut(s) 785, 1259, 3659
Mph1103I ATGCAT 2 cut(s) 691, 2086
MroI TCCGGA 2 cut(s) 1181, 2014
MroXI GAANNNNTTC 1 cut(s) 950
MscI TGGCCA 3 cut(s) 785, 1259, 3659
MseI TTAA 6 cut(s) 353, 1133, 2222, 3122, 3146, 3203
MslI CAYNNNNRTG 1 cut(s) 66
Msp20I TGGCCA 3 cut(s) 785, 1259, 3659
MspA1I CMGCKG 4 cut(s) 974, 1145, 1619, 2402
MspI CCGG 8 cut(s) 575, 1182, 2015, 2833, 2850, 2917, 2945, 2973
MspR9I CCNGG 7 cut(s) 576, 770, 2500, 2527, 2734, 2834, 2945
Mva1269I GAATGC 1 cut(s) 232
MvaI CCWGG 4 cut(s) 770, 2500, 2527, 2734
MvnI CGCG 2 cut(s) 812, 3524
NarI GGCGCC 1 cut(s) 180
NciI CCSGG 3 cut(s) 576, 2834, 2945
NcoI CCATGG 1 cut(s) 859
NdeI CATATG 1 cut(s) 2080
NheI GCTAGC 2 cut(s) 532, 2563
NlaIV GGNNCC 5 cut(s) 181, 462, 1140, 1180, 3253
NmuCI GTSAC 5 cut(s) 385, 1290, 2404, 2782, 2975
NruI TCGCGA 1 cut(s) 812
NsbI TGCGCA 1 cut(s) 1914
NsiI ATGCAT 2 cut(s) 691, 2086
NspI RCATGY 2 cut(s) 386, 3283
NspV TTCGAA 1 cut(s) 2312
PagI TCATGA 2 cut(s) 2811, 3337
PceI AGGCCT 1 cut(s) 3019
PciSI GCTCTTC 2 cut(s) 43, 1800
PctI GAATGC 1 cut(s) 232
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 7 cut(s) 571, 994, 1016, 1240, 1580, 2301, 3042
Pfl23II CGTACG 1 cut(s) 1628
PfoI TCCNGGA 1 cut(s) 2525
PinAI ACCGGT 2 cut(s) 2916, 2972
PleI GAGTC 4 cut(s) 768, 1010, 1568, 3634
PluTI GGCGCC 1 cut(s) 183
PpsI GAGTC 4 cut(s) 768, 1010, 1568, 3634
Ppu21I YACGTR 2 cut(s) 1078, 2660
PshBI ATTAAT 1 cut(s) 3122
Psp1406I AACGTT 2 cut(s) 1050, 3239
Psp6I CCWGG 4 cut(s) 768, 2498, 2525, 2732
PspFI CCCAGC 2 cut(s) 1145, 1940
PspGI CCWGG 4 cut(s) 768, 2498, 2525, 2732
PspLI CGTACG 1 cut(s) 1628
PspN4I GGNNCC 5 cut(s) 181, 462, 1140, 1180, 3253
PspPI GGNCC 8 cut(s) 766, 1799, 2053, 2617, 2644, 2654, 2914, 3665
PstI CTGCAG 2 cut(s) 730, 2572
PstNI CAGNNNCTG 4 cut(s) 664, 769, 974, 1972
PsuI RGATCY 3 cut(s) 2354, 2866, 3721
PvuII CAGCTG 3 cut(s) 1145, 1619, 2402
RruI TCGCGA 1 cut(s) 812
RseI CAYNNNNRTG 1 cut(s) 66
SapI GCTCTTC 2 cut(s) 43, 1800
SaqAI TTAA 6 cut(s) 353, 1133, 2222, 3122, 3146, 3203
Sau96I GGNCC 8 cut(s) 766, 1799, 2053, 2617, 2644, 2654, 2914, 3665
ScaI AGTACT 3 cut(s) 950, 2264, 3609
SchI GAGTC 4 cut(s) 769, 1011, 1568, 3634
ScrFI CCNGG 7 cut(s) 576, 770, 2500, 2527, 2734, 2834, 2945
SduI GDGCHC 3 cut(s) 1721, 2828, 2961
SfcI CTRYAG 4 cut(s) 726, 2409, 2568, 3429
SfoI GGCGCC 1 cut(s) 181
SfuI TTCGAA 1 cut(s) 2312
SinI GGWCC 4 cut(s) 1799, 2053, 2617, 2914
SmiMI CAYNNNNRTG 1 cut(s) 66
SmlI CTYRAG 5 cut(s) 195, 1277, 1891, 2544, 3356
SmoI CTYRAG 5 cut(s) 195, 1277, 1891, 2544, 3356
SpeI ACTAGT 1 cut(s) 3551
Sse9I AATT 8 cut(s) 672, 1067, 1082, 1420, 2340, 3162, 3299, 3731
SseBI AGGCCT 1 cut(s) 3019
SspDI GGCGCC 1 cut(s) 179
StuI AGGCCT 1 cut(s) 3019
StyD4I CCNGG 7 cut(s) 574, 768, 2498, 2525, 2732, 2832, 2943
StyI CCWWGG 4 cut(s) 493, 636, 859, 2772
TaqI TCGA 9 cut(s) 1014, 1190, 1921, 2312, 2637, 3057, 3126, 3172, 3312
TasI AATT 8 cut(s) 672, 1067, 1082, 1420, 2340, 3162, 3299, 3731
TatI WGTACW 5 cut(s) 243, 948, 2262, 2467, 3607
TauI GCSGC 5 cut(s) 159, 180, 512, 974, 1890
TfiI GAWTC 7 cut(s) 571, 994, 1016, 1240, 1580, 2301, 3042
Tru1I TTAA 6 cut(s) 353, 1133, 2222, 3122, 3146, 3203
Tru9I TTAA 6 cut(s) 353, 1133, 2222, 3122, 3146, 3203
TseFI GTSAC 5 cut(s) 385, 1290, 2404, 2782, 2975
Tsp45I GTSAC 5 cut(s) 385, 1290, 2404, 2782, 2975
TspGWI ACGGA 6 cut(s) 40, 540, 603, 607, 2769, 2887
VpaK11BI GGWCC 4 cut(s) 1799, 2053, 2617, 2914
VspI ATTAAT 1 cut(s) 3122
XagI CCTNNNNNAGG 1 cut(s) 3359
XapI RAATTY 3 cut(s) 1067, 1082, 2340
XbaI TCTAGA 1 cut(s) 1549
XceI RCATGY 2 cut(s) 386, 3283
XcmI CCANNNNNNNNNTGG 2 cut(s) 1567, 1745
XmnI GAANNNNTTC 1 cut(s) 950
ZraI GACGTC 2 cut(s) 445, 1678
ZrmI AGTACT 3 cut(s) 950, 2264, 3609
Zsp2I ATGCAT 2 cut(s) 691, 2086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.