Rorug02G0021300

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
1734555 .. 1736536
1982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0021300.1

Sequence Viewer

Length: 1065 bp
ATGGCTGAATCTTCCACTCCTGCCAAGGCCGAATTATTAGCAACCAAAACTGTGCAAGAGCTACTCACTGAAGGAGAACTACTTGTACCACCACAGAAATTTATTCTGAAAGATGGCATCCCACTTCCAAATGCTTCTGTTGAGTTGATGGATGTTCCAGTTATTGATCTTGGTCTCCTCACACCTTCCTCATTCAGTGTGGAAGAACTTGACAAACTCAGATCAGCTCTTACCACAGGGTGTTGCTTTCATGTAATAAACCATGGAATGACTCCTGAATTCCTTGACAAAGTCCGTGAAATCACGAAACAGTTTTTCGCAATTCCAGTGGAAGAGAAGCAGAAATATTTGAGGCCAGTCGACGATTATGAAGGATATGGGAATGACATGGTTTTGTCAGAGCAGCAAACACTTGATTGGACCGACCGACTATACCTTACTGCATATCCACCAGACCAGCGCAGGCTCAAGTTTTGGCCTGAAAAACCCAAATCTTTTAGGGATACTCTAGACCAATATACCAGTAAGTTACAGGTGATAACAGAAACTGTCCTTAAGGCCATGGCGCGGTCATTGAATTTGGAGGAAGCTTGCTTTCTGGACAAGTTTGGAGAACAAGGAAAAATGGATGCTAGGTTTAACTTCTATCCTCCATGTTCAAGGCCTGATCGCATCCTCGGTTTCAAGCCACATGCAGATAGTTCAATAATCACCATTGTCTTGCAAGATAAAGAAGTGGAAGGTCTTCAATTTCTGAAAGATGATCAGTGGTTTAGGGCTCCCATTGTTCCTGAGGCGCTTCTCATTAATGTTGGTGATCAAGTAGAGATATTAACTAATGGACTATTCAAGAGCCCAGTGCACAAGGTAGTGATAAATGGAGAAAAGGAGAGGATTTCTTTGGCTGTGTTCTGTTTCCCGGATTCAGAGACAGAGATTAAACCCTTTAAAAGCCTTATCAATGAGTCAAGGCCAAGGTTGTACAAAAAGATGAAAAACTACGGTGACATCTTTTTCGAATACTACCAGCAGGGAAGAAGACCAATTGAAGCAGCAATAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

354

Amino Acids

40.55

Weight (kDa)

5.24

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 52 - 161 6.5e-24 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 212 - 307 8.2e-31 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 360
AccII CGCG 1 cut(s) 568
AciI CCGC 1 cut(s) 568
AcsI RAATTY 3 cut(s) 98, 278, 577
AcuI CTGAAG 1 cut(s) 90
AdeI CACNNNGTG 1 cut(s) 240
AfaI GTAC 2 cut(s) 87, 983
AfiI CCNNNNNNNGG 1 cut(s) 567
AflII CTTAAG 1 cut(s) 554
AgsI TTSAA 7 cut(s) 577, 660, 685, 705, 749, 850, 1049
AluBI AGCT 3 cut(s) 61, 227, 590
AluI AGCT 3 cut(s) 61, 227, 590
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 2 cut(s) 179, 923
Alw44I GTGCAC 1 cut(s) 860
AlwNI CAGNNNCTG 1 cut(s) 548
AoxI GGCC 6 cut(s) 27, 353, 476, 558, 662, 971
ApaLI GTGCAC 1 cut(s) 860
ApeKI GCWGC 2 cut(s) 403, 1052
ApoI RAATTY 3 cut(s) 98, 278, 577
ArsI GACNNNNNNTTYG 2 cut(s) 998, 1030
AseI ATTAAT 1 cut(s) 807
Asp700I GAANNNNTTC 1 cut(s) 744
AspLEI GCGC 3 cut(s) 462, 568, 799
AspS9I GGNCC 1 cut(s) 420
AsuC2I CCSGG 1 cut(s) 920
AsuHPI GGTGA 4 cut(s) 547, 703, 827, 1016
AsuII TTCGAA 1 cut(s) 1017
AvaII GGWCC 1 cut(s) 420
AxyI CCTNAGG 1 cut(s) 792
BaeGI GKGCMC 1 cut(s) 864
BanII GRGCYC 2 cut(s) 781, 857
BarI GAAGNNNNNNTAC 2 cut(s) 63, 95
BbsI GAAGAC 2 cut(s) 737, 1045
Bbv12I GWGCWC 1 cut(s) 864
BbvI GCAGC 1 cut(s) 415
BccI CCATC 2 cut(s) 107, 142
BciVI GTATCC 1 cut(s) 496
BclI TGATCA 2 cut(s) 763, 817
BcnI CCSGG 1 cut(s) 920
BcoDI GTCTC 2 cut(s) 179, 923
BfaI CTAG 2 cut(s) 509, 633
BfoI RGCGCY 1 cut(s) 800
BfrI CTTAAG 1 cut(s) 554
BfuI GTATCC 1 cut(s) 496
BisI GCNGC 2 cut(s) 404, 1053
BlsI GCNGC 2 cut(s) 405, 1054
Bme1390I CCNGG 1 cut(s) 920
Bme18I GGWCC 1 cut(s) 420
BmgT120I GGNCC 1 cut(s) 420
BmiI GGNNCC 1 cut(s) 780
BmrFI CCNGG 1 cut(s) 920
BmrI ACTGGG 1 cut(s) 851
BmsI GCATC 3 cut(s) 126, 619, 681
BmuI ACTGGG 1 cut(s) 851
BpiI GAAGAC 2 cut(s) 737, 1045
Bpu14I TTCGAA 1 cut(s) 1017
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 1 cut(s) 920
BsaI GGTCTC 1 cut(s) 179
BsaJI CCNNGG 5 cut(s) 24, 262, 561, 676, 974
Bsc4I CCNNNNNNNGG 1 cut(s) 567
Bse1I ACTGG 5 cut(s) 158, 326, 356, 522, 857
Bse21I CCTNAGG 1 cut(s) 792
BseDI CCNNGG 5 cut(s) 24, 262, 561, 676, 974
BseGI GGATG 4 cut(s) 117, 157, 634, 672
BseLI CCNNNNNNNGG 1 cut(s) 567
BseMII CTCAG 2 cut(s) 232, 783
BseNI ACTGG 5 cut(s) 158, 326, 356, 522, 857
BseRI GAGGAG 1 cut(s) 167
BseSI GKGCMC 1 cut(s) 864
BseXI GCAGC 1 cut(s) 415
Bsh1236I CGCG 1 cut(s) 568
Bsh1285I CGRYCG 1 cut(s) 427
BshFI GGCC 6 cut(s) 29, 355, 478, 560, 664, 973
BsiEI CGRYCG 1 cut(s) 427
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 1 cut(s) 920
BslI CCNNNNNNNGG 1 cut(s) 567
BsmAI GTCTC 2 cut(s) 179, 923
BsnI GGCC 6 cut(s) 29, 355, 478, 560, 664, 973
Bso31I GGTCTC 1 cut(s) 179
Bsp119I TTCGAA 1 cut(s) 1017
Bsp1286I GDGCHC 3 cut(s) 781, 857, 864
Bsp1407I TGTACA 1 cut(s) 981
Bsp143I GATC 5 cut(s) 166, 221, 667, 763, 817
Bsp19I CCATGG 2 cut(s) 262, 561
BspACI CCGC 1 cut(s) 568
BspANI GGCC 6 cut(s) 29, 355, 478, 560, 664, 973
BspCNI CTCAG 2 cut(s) 231, 784
BspFNI CGCG 1 cut(s) 568
BspLI GGNNCC 1 cut(s) 780
BspT104I TTCGAA 1 cut(s) 1017
BspTI CTTAAG 1 cut(s) 554
BspTNI GGTCTC 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 981
BsrI ACTGG 5 cut(s) 158, 326, 356, 522, 857
BssECI CCNNGG 5 cut(s) 24, 262, 561, 676, 974
BssMI GATC 5 cut(s) 166, 221, 667, 763, 817
BssT1I CCWWGG 4 cut(s) 24, 262, 561, 974
Bst4CI ACNGT 4 cut(s) 52, 312, 550, 1004
Bst6I CTCTTC 1 cut(s) 327
BstAFI CTTAAG 1 cut(s) 554
BstAUI TGTACA 1 cut(s) 981
BstBI TTCGAA 1 cut(s) 1017
BstC8I GCNNGC 2 cut(s) 464, 592
BstDEI CTNAG 2 cut(s) 218, 792
BstDSI CCRYGG 2 cut(s) 262, 561
BstF5I GGATG 4 cut(s) 117, 157, 634, 672
BstFNI CGCG 1 cut(s) 568
BstH2I RGCGCY 1 cut(s) 800
BstHHI GCGC 3 cut(s) 462, 568, 799
BstKTI GATC 5 cut(s) 169, 224, 670, 766, 820
BstMAI GTCTC 2 cut(s) 179, 923
BstMBI GATC 5 cut(s) 166, 221, 667, 763, 817
BstMCI CGRYCG 1 cut(s) 427
BstNSI RCATGY 1 cut(s) 695
BstSCI CCNGG 1 cut(s) 918
BstSLI GKGCMC 1 cut(s) 864
BstUI CGCG 1 cut(s) 568
BstV1I GCAGC 1 cut(s) 415
BstV2I GAAGAC 2 cut(s) 737, 1045
Bsu36I CCTNAGG 1 cut(s) 792
BsuI GTATCC 1 cut(s) 496
BsuRI GGCC 6 cut(s) 29, 355, 478, 560, 664, 973
BtgI CCRYGG 2 cut(s) 262, 561
BtsCI GGATG 4 cut(s) 117, 157, 634, 672
BtsIMutI CAGTG 5 cut(s) 66, 202, 333, 773, 864
Cac8I GCNNGC 2 cut(s) 464, 592
CaiI CAGNNNCTG 1 cut(s) 548
CfoI GCGC 3 cut(s) 462, 568, 799
Cfr13I GGNCC 1 cut(s) 420
Csp6I GTAC 2 cut(s) 86, 982
CspCI CAANNNNNGTGG 2 cut(s) 309, 344
CviAII CATG 6 cut(s) 251, 263, 388, 562, 654, 692
CviQI GTAC 2 cut(s) 86, 982
DdeI CTNAG 2 cut(s) 218, 792
DpnI GATC 5 cut(s) 168, 223, 669, 765, 819
DpnII GATC 5 cut(s) 166, 221, 667, 763, 817
DraI TTTAAA 1 cut(s) 949
DraIII CACNNNGTG 1 cut(s) 240
Eam1104I CTCTTC 1 cut(s) 327
EarI CTCTTC 1 cut(s) 327
Eco130I CCWWGG 4 cut(s) 24, 262, 561, 974
Eco147I AGGCCT 1 cut(s) 664
Eco24I GRGCYC 2 cut(s) 781, 857
Eco31I GGTCTC 1 cut(s) 179
Eco47I GGWCC 1 cut(s) 420
Eco57I CTGAAG 1 cut(s) 90
Eco81I CCTNAGG 1 cut(s) 792
EcoRI GAATTC 1 cut(s) 278
EcoT14I CCWWGG 4 cut(s) 24, 262, 561, 974
EcoT38I GRGCYC 2 cut(s) 781, 857
ErhI CCWWGG 4 cut(s) 24, 262, 561, 974
FaeI CATG 6 cut(s) 254, 266, 391, 565, 657, 695
FatI CATG 6 cut(s) 250, 262, 387, 561, 653, 691
FbaI TGATCA 2 cut(s) 763, 817
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 2 cut(s) 404, 1053
FokI GGATG 4 cut(s) 104, 164, 641, 659
FriOI GRGCYC 2 cut(s) 781, 857
Fsp4HI GCNGC 2 cut(s) 404, 1053
FspBI CTAG 2 cut(s) 509, 633
GlaI GCGC 3 cut(s) 461, 567, 798
GluI GCNGC 2 cut(s) 404, 1053
HaeII RGCGCY 1 cut(s) 800
HaeIII GGCC 6 cut(s) 29, 355, 478, 560, 664, 973
HapII CCGG 1 cut(s) 920
HhaI GCGC 3 cut(s) 462, 568, 799
Hin1II CATG 6 cut(s) 254, 266, 391, 565, 657, 695
Hin6I GCGC 3 cut(s) 460, 566, 797
HinP1I GCGC 3 cut(s) 460, 566, 797
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HindIII AAGCTT 1 cut(s) 588
HinfI GANTC 4 cut(s) 8, 271, 923, 965
HpaII CCGG 1 cut(s) 920
HphI GGTGA 4 cut(s) 547, 703, 827, 1016
Hpy166II GTNNAC 2 cut(s) 361, 862
Hpy188I TCNGA 5 cut(s) 108, 221, 400, 756, 928
Hpy188III TCNNGA 6 cut(s) 275, 304, 509, 599, 791, 850
Hpy8I GTNNAC 2 cut(s) 361, 862
Hpy99I CGWCG 1 cut(s) 365
HpyAV CCTTC 4 cut(s) 65, 195, 365, 734
HpyCH4III ACNGT 4 cut(s) 52, 312, 550, 1004
HpyCH4V TGCA 5 cut(s) 55, 443, 695, 724, 862
HpyF3I CTNAG 2 cut(s) 218, 792
Hsp92II CATG 6 cut(s) 254, 266, 391, 565, 657, 695
HspAI GCGC 3 cut(s) 460, 566, 797
Ksp22I TGATCA 2 cut(s) 763, 817
Kzo9I GATC 5 cut(s) 166, 221, 667, 763, 817
LmnI GCTCC 1 cut(s) 784
Lsp1109I GCAGC 1 cut(s) 415
LweI GCATC 3 cut(s) 126, 619, 681
MaeI CTAG 2 cut(s) 509, 633
MaeIII GTNAC 2 cut(s) 528, 1004
MalI GATC 5 cut(s) 168, 223, 669, 765, 819
MboI GATC 5 cut(s) 166, 221, 667, 763, 817
MboII GAAGA 6 cut(s) 3, 215, 344, 737, 1047, 1050
MfeI CAATTG 1 cut(s) 1044
MhlI GDGCHC 3 cut(s) 781, 857, 864
MluCI AATT 7 cut(s) 32, 98, 278, 321, 577, 749, 1044
MlyI GAGTC 2 cut(s) 265, 974
MnlI CCTC 8 cut(s) 188, 199, 345, 577, 660, 686, 787, 885
MroXI GAANNNNTTC 1 cut(s) 744
MseI TTAA 6 cut(s) 555, 639, 807, 833, 939, 948
MspCI CTTAAG 1 cut(s) 554
MspI CCGG 1 cut(s) 920
MspR9I CCNGG 1 cut(s) 920
MunI CAATTG 1 cut(s) 1044
MvnI CGCG 1 cut(s) 568
NciI CCSGG 1 cut(s) 920
NcoI CCATGG 2 cut(s) 262, 561
NdeII GATC 5 cut(s) 166, 221, 667, 763, 817
NlaIII CATG 6 cut(s) 254, 266, 391, 565, 657, 695
NlaIV GGNNCC 1 cut(s) 780
NmuCI GTSAC 1 cut(s) 1004
NspI RCATGY 1 cut(s) 695
NspV TTCGAA 1 cut(s) 1017
PceI AGGCCT 1 cut(s) 664
PdmI GAANNNNTTC 1 cut(s) 744
PfeI GAWTC 2 cut(s) 8, 923
PflFI GACNNNGTC 1 cut(s) 290
PfoI TCCNGGA 1 cut(s) 918
PkrI GCNGC 2 cut(s) 405, 1054
PleI GAGTC 2 cut(s) 265, 973
PpsI GAGTC 2 cut(s) 265, 973
PshBI ATTAAT 1 cut(s) 807
PspN4I GGNNCC 1 cut(s) 780
PspPI GGNCC 1 cut(s) 420
PsrI GAACNNNNNNTAC 2 cut(s) 69, 101
PstNI CAGNNNCTG 1 cut(s) 548
PsyI GACNNNGTC 1 cut(s) 290
RsaI GTAC 2 cut(s) 87, 983
RsaNI GTAC 2 cut(s) 86, 982
SalI GTCGAC 1 cut(s) 359
SaqAI TTAA 6 cut(s) 555, 639, 807, 833, 939, 948
SatI GCNGC 2 cut(s) 404, 1053
Sau3AI GATC 5 cut(s) 166, 221, 667, 763, 817
Sau96I GGNCC 1 cut(s) 420
SchI GAGTC 2 cut(s) 265, 974
ScrFI CCNGG 1 cut(s) 920
SduI GDGCHC 3 cut(s) 781, 857, 864
SfaNI GCATC 3 cut(s) 126, 619, 681
SfuI TTCGAA 1 cut(s) 1017
SinI GGWCC 1 cut(s) 420
SmlI CTYRAG 2 cut(s) 467, 554
SmoI CTYRAG 2 cut(s) 467, 554
Sse9I AATT 7 cut(s) 32, 98, 278, 321, 577, 749, 1044
SseBI AGGCCT 1 cut(s) 664
SsiI CCGC 1 cut(s) 568
SspI AATATT 1 cut(s) 347
SspMI CTAG 2 cut(s) 509, 633
StuI AGGCCT 1 cut(s) 664
StyD4I CCNGG 1 cut(s) 918
StyI CCWWGG 4 cut(s) 24, 262, 561, 974
TaaI ACNGT 4 cut(s) 52, 312, 550, 1004
TaqI TCGA 2 cut(s) 360, 1017
TaqII GACCGA 2 cut(s) 437, 441
TasI AATT 7 cut(s) 32, 98, 278, 321, 577, 749, 1044
TatI WGTACW 1 cut(s) 981
TfiI GAWTC 2 cut(s) 8, 923
Tru1I TTAA 6 cut(s) 555, 639, 807, 833, 939, 948
Tru9I TTAA 6 cut(s) 555, 639, 807, 833, 939, 948
TscAI CASTG 5 cut(s) 73, 202, 333, 773, 864
TseFI GTSAC 1 cut(s) 1004
TseI GCWGC 2 cut(s) 403, 1052
Tsp45I GTSAC 1 cut(s) 1004
TspDTI ATGAA 3 cut(s) 239, 384, 1007
TspGWI ACGGA 1 cut(s) 284
TspRI CASTG 5 cut(s) 73, 202, 333, 773, 864
Tth111I GACNNNGTC 1 cut(s) 290
Vha464I CTTAAG 1 cut(s) 554
VneI GTGCAC 1 cut(s) 860
VpaK11BI GGWCC 1 cut(s) 420
VspI ATTAAT 1 cut(s) 807
XapI RAATTY 3 cut(s) 98, 278, 577
XbaI TCTAGA 1 cut(s) 508
XceI RCATGY 1 cut(s) 695
XmiI GTMKAC 1 cut(s) 360
XmnI GAANNNNTTC 1 cut(s) 744
XspI CTAG 2 cut(s) 509, 633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.