Prupe.4G204300_v2.0.a1

Multidrug pheromone exporter, MDR family, ABC transporter family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000317
Physical Location & Seq
Forward (+)
12723952 .. 12729628
5677 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G204300.1

Sequence Viewer

Length: 3762 bp
ATGGGGAATAATTCATATCAAAGCATGTTTCGCTATGCAGACGGCACGGACAAGCTGTTGATGTTGTTTGGGACTTTAGGCAGCATTGGTGATGGACTGCAGAACCCTCTCATGATGTACATTCTCAGTGAGGTTATCAATTCTTATGGAAGTGCTAATGGAGGTTTGACAAATGCTGATGTAGACAAGTTTGCACTCAGGCTCTTCTATGTTGCCATTGGAGTTGGACTTGCAGCATTTGTTGAAGGGTTATGTTGGACACGAACTGCAGAGAGGCAGACTTCCAGAATGAGAATGGAATATCTGAAATCTGTTCTTAGACAAGAAGTTTCCTTCTTTGACACCCAGACTGCCGGTTCTTCAACAACATACCAAGTTATCTCAATCATCTCCTCTGATGCCAACGCAGTCCAAGTTGTCTTATGCGAGAAGATACCTGACTGCCTGACATACATGTCAACTTTCTTCTTCTGCCACATATTTGCCTTCAGACTGTCATGGAGGTTGACGTTGGCTGCTATGCCGCTTTCAATCATGTTCATAGCTCCAGGACTTGTATTTGGAAAGATTCTGATGGGCCTGGTAATGAAGGGGATTGAAGCTTATGGAGTTGCAGGGGGATTTGCCGAACAAGCAATTTCTTCAGTAAGAACTGTATACTCTTATGTTGGAGAAAATCAGACACTAAATAGGTTCAGCACTTCACTTCAGAAAGTTACTAAACTTGGAATCAAGGTAGGTCTTGTAAAGGGATTGCTGATGGGAAGCATGGGAATCATTTATATCGGTTGGGGGTTTCAGGCTTGGGTTGGCACTTATTTGGTTACTCAGAAAGGAGAAGATGGTGGGCATGTTTTTGTAGCCGGTTTCAATGTCCTCATGGGAGGCCTGAGTATTTTAAGTGCTCTCCCAAACTTGACTGCTATCACAGAGGCATTGGCAGCTACAACTCGAATTCTTGAAATGATTGATCGTGTTCCTAGTATCGACACTGAAGACAGAAAAGGGAAGGCTTTATCACATGTCAGAGGAGAAATAGAATTCCAAGACATTTACTTCAGTTACCCATCAAGACCTGATACCTCAGTCTTACAAGGCTTGAATCTTAAGGTTCCAGCCGGTAAGAGTGTAGGTCTAGTTGGGGGCAGTGGTTCTGGCAAGTCAACAATCATTGCATTGCTTGAGAGATTTTATGACCCTATTGAAGGAGAAATACTCTTGGATGGACACAAAATTAGAAGACTTCAGGCAAAATGGTTGAGATCCCAAATGGGTCTGGTTAATCAGGAACCTGTTCTGTTTGCAACTTCCTTAAAAGAGAACATACTTTTTGGAAAGGAAGGAGCTTCAATGGAAGAAGTAATAAACGCAGCTAAAGCTGCAAATGCACATGACTTCATCGTTAAGTTACCAGACGGATATGAAACTCAAGCTGGTCAATTTGGGTTCCAACTTTCTGGCGGGCAAAAGCAGCGAATTGCTATAGCAAGAGCTCTGCTAAGGGATCCAAAAATCCTACTTCTTGATGAAGCAACTAGTGCACTGGATGCACAGTCTGAAAGAGTAGTGCAGGAGGCAATTGATCAGGCGTCAAAAGGGAGGACAACAATCATAATTGCCCACCGCCTTTCTACAATCCGAACAGCAAATTTGATTGTGGTTCTTCAAGCTGGGAAAGTAGTTGAATCAGGCTCACACAACAAGCTGATGCAAATGAAGGGGGAGCAGGGAGGTGAATACTTCAAGATGGTACAAATGCAGCAGATGGCAAGCCAAAATGAGGCTGCTGATGATTCCAATTCTCAATCATATGAAAAACCTCGCCGTAGGAGGAGCGTTACACCAAGCCCCATTAGTTACAGATCAACTGCTCCTTCTCCAGCGTTCAACCCCACAGCGATGTCTATGTCCATGGGGACACCCTACTCCTTCTCTGTCCAATATGATCCTGATGATGAAAGTGATGATGAAGACTTCAAGCGCCCAACTTATCCTCCTCCTTCACAATGGCGTTTGCTGAAAATGAATGCACCAGAATGGGGACAAGCCTTACTTGGATGCTTGGGTGCAATAGGTTCTGGGGCAGTACAACCTATAAACGCCTACTGTGTCGGATCACTTATATCAGTTTACTTCCTCCAGGACAAATCTGAAATTAAGTCCCAATCCAGGGTCTTGTCCCTTGTTTTCTTAGGCATTGGTGTTTTCAACTTCTTCACCAATCTCCTCCAACACTACAATTTTGCAATCATGGGAGAAAAGTTGACCACAAGGGTAAGAGAGCAACTACTTGAAAAGCTGATGACTTTTGAGATTGGGTGGTATGATCAAGATGAGAACACAAGTGCAGCCATTTGTGCAAGGTTAGCCACTGAAGTAAACATGGTTCGATCTCTTGTTGGGGACAGGATGTCATTGCTGGTCCAAGCAGTTTTCGGGGCCACCTTTGCTTATGCAGTAGGACTTGTGCTGACATGGAGGCTAGCCCTTGTGATGATAGCAGTGCAGCCAATAGTCATTGGGAGCTTTTATGCAAGGAGTATCTTAATGAAGAGTATGGGAGAAAAAGCCCGAAAAGCTCAAAAGCAAGGAAGCCAATTGGCAAGCGAAGCTGTCATCAACCACAGAACTATAACTGCCTTTTCTTCTCAGAAAAGAATTTTGGGGCTGTTTAGTGCAACCTTGAAAGGTCCTAAGAAGGAGAGTATCAAACAGTCCTATGTTTCGGGTGCTGGCTTGTTTAGCTCCCAATTCTTCAACACTGCTGCTACAGCTTTAGCTTACTGGTATGGTGGGAGGCTACTGGTGCTGGAGGAGATAACTCCAAAGCATCTATTTCAGGCTTTTTTGATACTTCTATTTACCGCTTATATCATTGCAGAAGCTGGAAGCATGACGTCTGATATATCTAAAGGAAACAGTGCCATTCAATCGGTGTTTGCCATTTTAGATAGGAAAAGTGAGATCGATCCGGATAACAAATGGGGACTGGAAATTAAGAGGAGGATAAAGGGTCGTGTCGAGTTCAGAAATGTTTTCTTTTCATATCCAACAAGACCTGACCAGATGATACTGAAAGGACTGAGCCTCAGAATTGATGCAGGCAAGACAGTGGCACTAGTTGGGCAGAGTGGTTCTGGAAAATCCACCATTATTGGGCTCATTGAGAGGTTTTATGATCCAAAGAAGGGATCAGTCTGTATAGATGAACAGGATATTAAAAACTATAACTTGAGAATGTTGAGGTCACATATAGCATTGGTTAGTCAGGAGCCTACCCTGTTTGCTGGAACTGTCCGTGAAAATATTGCATACGGTAAAGAGAACGCAAAAGAATCTGAGATCAAGAGGGCTGCAGTTCTGGCCAATGCTCATGAATTCATAAGTGGAATGGATAATGGTTATGATACATATTGTGGAGAGAGAGGAGTTCAGCTATCAGGAGGTCAGAAACAAAGGATTGCAATAGCTCGGGCAATACTGAAGAACCCGTCAATCCTCCTACTGGATGAGGCTACCAGCGCGCTTGATAGCGTGTCGGAGAAGGCAGTTCAAGAAGCGCTCAAGAAGATGATGGTCAGTAGAACATGTATAGTCATTGCTCACCGGCTATCCACGATACAGAAGGCCAACTCCATTGCTGTGATCAAGAATGGTAAGGTTGCAGAACAAGGTTCACACAATGAATTGATTTCCTTGGGACGCAATGGAGCATACTACTCTCTGATAAAACTACAGACTGGTAGTTCACCTCCCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1254

Amino Acids

137.39

Weight (kDa)

9.19

Isoelectric Point (pI)

39.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 454
AatII GACGTC 1 cut(s) 2900
AccI GTMKAC 2 cut(s) 183, 657
AccII CGCG 1 cut(s) 3524
AccIII TCCGGA 1 cut(s) 2971
AciI CCGC 4 cut(s) 524, 1461, 1624, 2865
AclWI GGATC 8 cut(s) 1257, 1499, 1512, 1940, 2122, 2963, 3173, 3199
AcoI YGGCCR 1 cut(s) 3363
AcsI RAATTY 5 cut(s) 954, 1040, 1648, 2658, 3377
AcuI CTGAAG 8 cut(s) 472, 627, 692, 1014, 1042, 1229, 2394, 3503
AcyI GRCGYC 2 cut(s) 1589, 2897
AfaI GTAC 3 cut(s) 119, 1752, 2088
AfeI AGCGCT 1 cut(s) 3561
AfiI CCNNNNNNNGG 8 cut(s) 1205, 1780, 2039, 2169, 2170, 3156, 3188, 3505
AflII CTTAAG 1 cut(s) 1106
AflIII ACRYGT 3 cut(s) 453, 1021, 3587
AhdI GACNNNNNGTC 1 cut(s) 2410
AhlI ACTAGT 2 cut(s) 1535, 3118
AjnI CCWGG 5 cut(s) 547, 579, 2139, 2168, 3755
AjuI GAANNNNNNNTTGG 2 cut(s) 2645, 2677
Alw21I GWGCWC 3 cut(s) 907, 1495, 1543
Alw44I GTGCAC 1 cut(s) 1539
AlwI GGATC 8 cut(s) 1257, 1499, 1512, 1940, 2122, 2963, 3173, 3199
AlwNI CAGNNNCTG 1 cut(s) 2885
Ama87I CYCGRG 1 cut(s) 3471
Aor13HI TCCGGA 1 cut(s) 2971
Aor51HI AGCGCT 1 cut(s) 3561
AoxI GGCC 5 cut(s) 577, 886, 2439, 3363, 3627
ApaLI GTGCAC 1 cut(s) 1539
ApoI RAATTY 5 cut(s) 954, 1040, 1648, 2658, 3377
Asp700I GAANNNNTTC 1 cut(s) 1293
AspLEI GCGC 4 cut(s) 1983, 3524, 3526, 3562
AspS9I GGNCC 4 cut(s) 577, 2422, 2439, 2690
AsuHPI GGTGA 5 cut(s) 101, 1745, 2209, 3596, 3741
AsuNHI GCTAGC 1 cut(s) 2482
AvaI CYCGRG 1 cut(s) 3471
AvaII GGWCC 2 cut(s) 2422, 2690
BaeGI GKGCMC 1 cut(s) 1543
BaeI ACNNNNGTAYC 2 cut(s) 1071, 1104
BalI TGGCCA 1 cut(s) 3365
BamHI GGATCC 1 cut(s) 1504
BanII GRGCYC 2 cut(s) 1495, 3162
BarI GAAGNNNNNNTAC 2 cut(s) 1197, 1229
BbsI GAAGAC 3 cut(s) 1002, 1246, 1977
Bbv12I GWGCWC 3 cut(s) 907, 1495, 1543
BccI CCATC 9 cut(s) 86, 568, 754, 836, 1075, 1217, 1741, 1759, 3568
BceAI ACGGC 2 cut(s) 58, 1809
BciT130I CCWGG 5 cut(s) 549, 581, 2141, 2170, 3757
BclI TGATCA 3 cut(s) 1582, 2326, 3645
BcuI ACTAGT 2 cut(s) 1535, 3118
BfaI CTAG 5 cut(s) 981, 1136, 1536, 2483, 3119
BfmI CTRYAG 6 cut(s) 98, 267, 1482, 2769, 3354, 3734
BfoI RGCGCY 2 cut(s) 1984, 3563
BfrI CTTAAG 1 cut(s) 1106
Bme1390I CCNGG 5 cut(s) 549, 581, 2141, 2170, 3757
Bme18I GGWCC 2 cut(s) 2422, 2690
BmeRI GACNNNNNGTC 1 cut(s) 2410
BmeT110I CYCGRG 1 cut(s) 3471
BmgT120I GGNCC 4 cut(s) 577, 2422, 2439, 2690
BmiI GGNNCC 6 cut(s) 1113, 1290, 1448, 1506, 2440, 3273
BmrFI CCNGG 5 cut(s) 549, 581, 2141, 2170, 3757
BmsI GCATC 6 cut(s) 388, 1537, 1698, 2048, 2839, 3088
BmtI GCTAGC 1 cut(s) 2486
BpiI GAAGAC 3 cut(s) 1002, 1246, 1977
BplI GAGNNNNNCTC 2 cut(s) 1200, 1232
BpmI CTGGAG 4 cut(s) 531, 1863, 2123, 2831
Bpu10I CCTNAGC 1 cut(s) 1499
BpuEI CTTGAG 4 cut(s) 1202, 1413, 3253, 3548
Bsa29I ATCGAT 1 cut(s) 2967
BsaHI GRCGYC 2 cut(s) 1589, 2897
BsaJI CCNNGG 4 cut(s) 1911, 2169, 3696, 3755
BsaWI WCCGGW 1 cut(s) 2971
BsaXI ACNNNNNCTCC 2 cut(s) 1978, 2008
Bsc4I CCNNNNNNNGG 8 cut(s) 1205, 1780, 2039, 2169, 2170, 3156, 3188, 3505
Bse118I RCCGGY 4 cut(s) 353, 863, 1118, 3606
Bse1I ACTGG 6 cut(s) 1548, 2789, 2808, 2994, 3510, 3745
Bse3DI GCAATG 7 cut(s) 1170, 1175, 2414, 2874, 3597, 3636, 3712
BseAI TCCGGA 1 cut(s) 2971
BseBI CCWGG 5 cut(s) 549, 581, 2141, 2170, 3757
BseCI ATCGAT 1 cut(s) 2967
BseDI CCNNGG 4 cut(s) 1911, 2169, 3696, 3755
BseGI GGATG 5 cut(s) 1228, 1552, 2063, 2415, 3514
BseLI CCNNNNNNNGG 8 cut(s) 1205, 1780, 2039, 2169, 2170, 3156, 3188, 3505
BseMI GCAATG 7 cut(s) 1170, 1175, 2414, 2874, 3597, 3636, 3712
BseMII CTCAG 9 cut(s) 139, 211, 842, 881, 1098, 2663, 3074, 3103, 3330
BseNI ACTGG 6 cut(s) 1548, 2789, 2808, 2994, 3510, 3745
BsePI GCGCGC 1 cut(s) 3522
BseRI GAGGAG 8 cut(s) 382, 1044, 1846, 1986, 2216, 2828, 3016, 3441
BseSI GKGCMC 1 cut(s) 1543
BseYI CCCAGC 1 cut(s) 1670
BsgI GTGCAG 3 cut(s) 1589, 2367, 2525
Bsh1236I CGCG 1 cut(s) 3524
BshFI GGCC 5 cut(s) 579, 888, 2441, 3365, 3629
BshVI ATCGAT 1 cut(s) 2967
BsiHKAI GWGCWC 3 cut(s) 907, 1495, 1543
BsiHKCI CYCGRG 1 cut(s) 3471
BsiSI CCGG 5 cut(s) 354, 864, 1119, 2972, 3607
BslFI GGGAC 8 cut(s) 85, 1930, 2055, 2146, 2164, 2417, 3000, 3714
BslI CCNNNNNNNGG 8 cut(s) 1205, 1780, 2039, 2169, 2170, 3156, 3188, 3505
BsmFI GGGAC 8 cut(s) 85, 1930, 2055, 2146, 2164, 2417, 3000, 3714
BsmI GAATGC 1 cut(s) 2032
BsnI GGCC 5 cut(s) 579, 888, 2441, 3365, 3629
BsoBI CYCGRG 1 cut(s) 3471
Bsp1286I GDGCHC 4 cut(s) 907, 1495, 1543, 3162
Bsp13I TCCGGA 1 cut(s) 2971
Bsp1407I TGTACA 1 cut(s) 117
Bsp19I CCATGG 1 cut(s) 1911
BspACI CCGC 4 cut(s) 524, 1461, 1624, 2865
BspANI GGCC 5 cut(s) 579, 888, 2441, 3365, 3629
BspCNI CTCAG 9 cut(s) 138, 210, 841, 882, 1097, 2662, 3075, 3102, 3331
BspDI ATCGAT 1 cut(s) 2967
BspEI TCCGGA 1 cut(s) 2971
BspFNI CGCG 1 cut(s) 3524
BspHI TCATGA 2 cut(s) 111, 3373
BspLI GGNNCC 6 cut(s) 1113, 1290, 1448, 1506, 2440, 3273
BspMAI CTGCAG 3 cut(s) 102, 271, 3358
BspOI GCTAGC 1 cut(s) 2486
BspPI GGATC 8 cut(s) 1257, 1499, 1512, 1940, 2122, 2963, 3173, 3199
BspQI GCTCTTC 1 cut(s) 209
BspTI CTTAAG 1 cut(s) 1106
BsrDI GCAATG 7 cut(s) 1170, 1175, 2414, 2874, 3597, 3636, 3712
BsrFI RCCGGY 4 cut(s) 353, 863, 1118, 3606
BsrGI TGTACA 1 cut(s) 117
BsrI ACTGG 6 cut(s) 1548, 2789, 2808, 2994, 3510, 3745
BssAI RCCGGY 4 cut(s) 353, 863, 1118, 3606
BssECI CCNNGG 4 cut(s) 1911, 2169, 3696, 3755
BssHII GCGCGC 1 cut(s) 3522
BssNAI GTATAC 1 cut(s) 658
BssNI GRCGYC 2 cut(s) 1589, 2897
BssT1I CCWWGG 2 cut(s) 1911, 3696
Bst1107I GTATAC 1 cut(s) 658
Bst2UI CCWGG 5 cut(s) 549, 581, 2141, 2170, 3757
Bst4CI ACNGT 9 cut(s) 495, 655, 1554, 2108, 2715, 2921, 3112, 3295, 3317
Bst6I CTCTTC 2 cut(s) 209, 2546
BstACI GRCGYC 2 cut(s) 1589, 2897
BstAFI CTTAAG 1 cut(s) 1106
BstAPI GCANNNNNTGC 2 cut(s) 1538, 1547
BstAUI TGTACA 1 cut(s) 117
BstC8I GCNNGC 7 cut(s) 1463, 1771, 2484, 2605, 2734, 3103, 3524
BstDSI CCRYGG 1 cut(s) 1911
BstENI CCTNNNNNAGG 1 cut(s) 1203
BstF5I GGATG 5 cut(s) 1228, 1552, 2063, 2415, 3514
BstFNI CGCG 1 cut(s) 3524
BstH2I RGCGCY 2 cut(s) 1984, 3563
BstHHI GCGC 4 cut(s) 1983, 3524, 3526, 3562
BstNI CCWGG 5 cut(s) 549, 581, 2141, 2170, 3757
BstNSI RCATGY 5 cut(s) 28, 457, 854, 1025, 3591
BstSCI CCNGG 5 cut(s) 547, 579, 2139, 2168, 3755
BstSFI CTRYAG 6 cut(s) 98, 267, 1482, 2769, 3354, 3734
BstSLI GKGCMC 1 cut(s) 1543
BstUI CGCG 1 cut(s) 3524
BstV2I GAAGAC 3 cut(s) 1002, 1246, 1977
BstX2I RGATCY 2 cut(s) 1262, 1504
BstXI CCANNNNNNTGG 1 cut(s) 1457
BstYI RGATCY 2 cut(s) 1262, 1504
BstZ17I GTATAC 1 cut(s) 658
Bsu15I ATCGAT 1 cut(s) 2967
BsuRI GGCC 5 cut(s) 579, 888, 2441, 3365, 3629
BsuTUI ATCGAT 1 cut(s) 2967
BtgI CCRYGG 1 cut(s) 1911
BtgZI GCGATG 1 cut(s) 1913
BtsCI GGATG 5 cut(s) 1228, 1552, 2063, 2415, 3514
BtsI GCAGTG 3 cut(s) 1153, 2508, 2760
BtsIMutI CAGTG 9 cut(s) 133, 990, 1153, 1541, 2370, 2508, 2760, 2926, 3117
Cac8I GCNNGC 7 cut(s) 1463, 1771, 2484, 2605, 2734, 3103, 3524
CaiI CAGNNNCTG 1 cut(s) 2885
CciI TCATGA 2 cut(s) 111, 3373
CfoI GCGC 4 cut(s) 1983, 3524, 3526, 3562
Cfr10I RCCGGY 4 cut(s) 353, 863, 1118, 3606
Cfr13I GGNCC 4 cut(s) 577, 2422, 2439, 2690
ClaI ATCGAT 1 cut(s) 2967
CseI GACGC 2 cut(s) 1578, 3711
Csp6I GTAC 3 cut(s) 118, 1751, 2087
CspCI CAANNNNNGTGG 2 cut(s) 3136, 3171
CviQI GTAC 3 cut(s) 118, 1751, 2087
DrdI GACNNNNNNGTC 1 cut(s) 454
DriI GACNNNNNGTC 1 cut(s) 2410
DseDI GACNNNNNNGTC 1 cut(s) 454
EaeI YGGCCR 1 cut(s) 3363
Eam1104I CTCTTC 2 cut(s) 209, 2546
Eam1105I GACNNNNNGTC 1 cut(s) 2410
EarI CTCTTC 2 cut(s) 209, 2546
Ecl136II GAGCTC 1 cut(s) 1493
Eco130I CCWWGG 2 cut(s) 1911, 3696
Eco147I AGGCCT 1 cut(s) 888
Eco24I GRGCYC 2 cut(s) 1495, 3162
Eco47I GGWCC 2 cut(s) 2422, 2690
Eco47III AGCGCT 1 cut(s) 3561
Eco53kI GAGCTC 1 cut(s) 1493
Eco57I CTGAAG 8 cut(s) 472, 627, 692, 1014, 1042, 1229, 2394, 3503
Eco88I CYCGRG 1 cut(s) 3471
EcoICRI GAGCTC 1 cut(s) 1493
EcoNI CCTNNNNNAGG 1 cut(s) 1203
EcoO109I RGGNCCY 1 cut(s) 2690
EcoRI GAATTC 3 cut(s) 954, 1040, 3377
EcoRII CCWGG 5 cut(s) 547, 579, 2139, 2168, 3755
EcoT14I CCWWGG 2 cut(s) 1911, 3696
EcoT38I GRGCYC 2 cut(s) 1495, 3162
ErhI CCWWGG 2 cut(s) 1911, 3696
FalI AAGNNNNNCTT 2 cut(s) 2037, 2069
FaqI GGGAC 8 cut(s) 85, 1930, 2055, 2146, 2164, 2417, 3000, 3714
FauI CCCGC 1 cut(s) 1454
FauNDI CATATG 1 cut(s) 1810
FbaI TGATCA 3 cut(s) 1582, 2326, 3645
FblI GTMKAC 2 cut(s) 183, 657
FokI GGATG 5 cut(s) 1235, 1559, 2070, 2422, 3521
FriOI GRGCYC 2 cut(s) 1495, 3162
FspBI CTAG 5 cut(s) 981, 1136, 1536, 2483, 3119
GlaI GCGC 4 cut(s) 1982, 3523, 3525, 3561
GsaI CCCAGC 1 cut(s) 1674
GsuI CTGGAG 4 cut(s) 531, 1863, 2123, 2831
HaeII RGCGCY 2 cut(s) 1984, 3563
HaeIII GGCC 5 cut(s) 579, 888, 2441, 3365, 3629
HapII CCGG 5 cut(s) 354, 864, 1119, 2972, 3607
HgaI GACGC 2 cut(s) 1578, 3711
HhaI GCGC 4 cut(s) 1983, 3524, 3526, 3562
Hin1I GRCGYC 2 cut(s) 1589, 2897
Hin6I GCGC 4 cut(s) 1981, 3522, 3524, 3560
HinP1I GCGC 4 cut(s) 1981, 3522, 3524, 3560
HincII GTYRAC 4 cut(s) 459, 507, 1164, 2265
HindII GTYRAC 4 cut(s) 459, 507, 1164, 2265
HindIII AAGCTT 1 cut(s) 600
HinfI GANTC 7 cut(s) 568, 729, 774, 1102, 1685, 1793, 3335
HpaII CCGG 5 cut(s) 354, 864, 1119, 2972, 3607
HphI GGTGA 5 cut(s) 101, 1745, 2209, 3596, 3741
HpyCH4III ACNGT 9 cut(s) 495, 655, 1554, 2108, 2715, 2921, 3112, 3295, 3317
HpyCH4IV ACGT 2 cut(s) 509, 2897
HpySE526I ACGT 2 cut(s) 509, 2897
Hsp92I GRCGYC 2 cut(s) 1589, 2897
HspAI GCGC 4 cut(s) 1981, 3522, 3524, 3560
Kpn2I TCCGGA 1 cut(s) 2971
Ksp22I TGATCA 3 cut(s) 1582, 2326, 3645
LguI GCTCTTC 1 cut(s) 209
LmnI GCTCC 9 cut(s) 550, 1343, 1723, 1833, 1876, 2523, 2750, 3271, 3710
LweI GCATC 6 cut(s) 388, 1537, 1698, 2048, 2839, 3088
MaeI CTAG 5 cut(s) 981, 1136, 1536, 2483, 3119
MaeII ACGT 2 cut(s) 509, 2897
MaeIII GTNAC 7 cut(s) 715, 823, 1061, 1407, 1837, 1856, 3246
MfeI CAATTG 2 cut(s) 1578, 2597
MflI RGATCY 2 cut(s) 1262, 1504
MhlI GDGCHC 4 cut(s) 907, 1495, 1543, 3162
MlsI TGGCCA 1 cut(s) 3365
MluNI TGGCCA 1 cut(s) 3365
MmeI TCCRAC 8 cut(s) 205, 236, 649, 1474, 2092, 2254, 3074, 3519
Mox20I TGGCCA 1 cut(s) 3365
MroI TCCGGA 1 cut(s) 2971
MroXI GAANNNNTTC 1 cut(s) 1293
MscI TGGCCA 1 cut(s) 3365
MseI TTAA 9 cut(s) 899, 1107, 1281, 1313, 1404, 2157, 2546, 2997, 3219
MslI CAYNNNNRTG 3 cut(s) 1898, 2035, 3641
Msp20I TGGCCA 1 cut(s) 3365
MspCI CTTAAG 1 cut(s) 1106
MspI CCGG 5 cut(s) 354, 864, 1119, 2972, 3607
MspR9I CCNGG 5 cut(s) 549, 581, 2141, 2170, 3757
MunI CAATTG 2 cut(s) 1578, 2597
Mva1269I GAATGC 1 cut(s) 2032
MvaI CCWGG 5 cut(s) 549, 581, 2141, 2170, 3757
MvnI CGCG 1 cut(s) 3524
NcoI CCATGG 1 cut(s) 1911
NdeI CATATG 1 cut(s) 1810
NheI GCTAGC 1 cut(s) 2482
NlaIV GGNNCC 6 cut(s) 1113, 1290, 1448, 1506, 2440, 3273
NmuCI GTSAC 1 cut(s) 3246
NspI RCATGY 5 cut(s) 28, 457, 854, 1025, 3591
PagI TCATGA 2 cut(s) 111, 3373
PauI GCGCGC 1 cut(s) 3522
PceI AGGCCT 1 cut(s) 888
PciI ACATGT 3 cut(s) 453, 1021, 3587
PciSI GCTCTTC 1 cut(s) 209
PctI GAATGC 1 cut(s) 2032
PdmI GAANNNNTTC 1 cut(s) 1293
PfeI GAWTC 7 cut(s) 568, 729, 774, 1102, 1685, 1793, 3335
PfoI TCCNGGA 2 cut(s) 547, 2139
PpuMI RGGWCCY 1 cut(s) 2690
PscI ACATGT 3 cut(s) 453, 1021, 3587
Psp124BI GAGCTC 1 cut(s) 1495
Psp5II RGGWCCY 1 cut(s) 2690
Psp6I CCWGG 5 cut(s) 547, 579, 2139, 2168, 3755
PspFI CCCAGC 1 cut(s) 1670
PspGI CCWGG 5 cut(s) 547, 579, 2139, 2168, 3755
PspN4I GGNNCC 6 cut(s) 1113, 1290, 1448, 1506, 2440, 3273
PspPI GGNCC 4 cut(s) 577, 2422, 2439, 2690
PspPPI RGGWCCY 1 cut(s) 2690
PsrI GAACNNNNNNTAC 2 cut(s) 2370, 2402
PstI CTGCAG 3 cut(s) 102, 271, 3358
PstNI CAGNNNCTG 1 cut(s) 2885
PsuI RGATCY 2 cut(s) 1262, 1504
PteI GCGCGC 1 cut(s) 3522
RsaI GTAC 3 cut(s) 119, 1752, 2088
RsaNI GTAC 3 cut(s) 118, 1751, 2087
RseI CAYNNNNRTG 3 cut(s) 1898, 2035, 3641
SacI GAGCTC 1 cut(s) 1495
SapI GCTCTTC 1 cut(s) 209
SaqAI TTAA 9 cut(s) 899, 1107, 1281, 1313, 1404, 2157, 2546, 2997, 3219
Sau96I GGNCC 4 cut(s) 577, 2422, 2439, 2690
ScrFI CCNGG 5 cut(s) 549, 581, 2141, 2170, 3757
SduI GDGCHC 4 cut(s) 907, 1495, 1543, 3162
SfaNI GCATC 6 cut(s) 388, 1537, 1698, 2048, 2839, 3088
SfcI CTRYAG 6 cut(s) 98, 267, 1482, 2769, 3354, 3734
SinI GGWCC 2 cut(s) 2422, 2690
SmiMI CAYNNNNRTG 3 cut(s) 1898, 2035, 3641
SmlI CTYRAG 5 cut(s) 1106, 1181, 1428, 3232, 3563
SmoI CTYRAG 5 cut(s) 1106, 1181, 1428, 3232, 3563
SpeI ACTAGT 2 cut(s) 1535, 3118
SseBI AGGCCT 1 cut(s) 888
SsiI CCGC 4 cut(s) 524, 1461, 1624, 2865
SspI AATATT 1 cut(s) 3307
SspMI CTAG 5 cut(s) 981, 1136, 1536, 2483, 3119
SstI GAGCTC 1 cut(s) 1495
StuI AGGCCT 1 cut(s) 888
StyD4I CCNGG 5 cut(s) 547, 579, 2139, 2168, 3755
StyI CCWWGG 2 cut(s) 1911, 3696
TaaI ACNGT 9 cut(s) 495, 655, 1554, 2108, 2715, 2921, 3112, 3295, 3317
TaiI ACGT 2 cut(s) 512, 2900
TaqI TCGA 5 cut(s) 952, 987, 2389, 2967, 3021
TatI WGTACW 2 cut(s) 117, 2086
TauI GCSGC 1 cut(s) 526
TfiI GAWTC 7 cut(s) 568, 729, 774, 1102, 1685, 1793, 3335
Tru1I TTAA 9 cut(s) 899, 1107, 1281, 1313, 1404, 2157, 2546, 2997, 3219
Tru9I TTAA 9 cut(s) 899, 1107, 1281, 1313, 1404, 2157, 2546, 2997, 3219
TscAI CASTG 9 cut(s) 133, 997, 1153, 1548, 2377, 2508, 2767, 2926, 3117
TseFI GTSAC 1 cut(s) 3246
Tsp45I GTSAC 1 cut(s) 3246
TspGWI ACGGA 3 cut(s) 62, 1431, 3287
TspRI CASTG 9 cut(s) 133, 997, 1153, 1548, 2377, 2508, 2767, 2926, 3117
Vha464I CTTAAG 1 cut(s) 1106
VneI GTGCAC 1 cut(s) 1539
VpaK11BI GGWCC 2 cut(s) 2422, 2690
XagI CCTNNNNNAGG 1 cut(s) 1203
XapI RAATTY 5 cut(s) 954, 1040, 1648, 2658, 3377
XceI RCATGY 5 cut(s) 28, 457, 854, 1025, 3591
XcmI CCANNNNNNNNNTGG 1 cut(s) 292
XmiI GTMKAC 2 cut(s) 183, 657
XmnI GAANNNNTTC 1 cut(s) 1293
XspI CTAG 5 cut(s) 981, 1136, 1536, 2483, 3119
ZraI GACGTC 1 cut(s) 2898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.