FvH4_1g06060

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000317
Physical Location & Seq
Reverse (-)
3229171 .. 3235153
5983 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g06060.t1

Sequence Viewer

Length: 3753 bp
ATGGATTCTCCAGGGAAGAATGAGAGGCATGAGAAAGAAGAGAAGAAGAAGAAGTCCGCAGATTCAGTATTCACAATTTTCAGATATGCTGATTGGGTTGATGTTGTGCTAATGGTTTTCGGAACCATCGGAGCTATCGGAGATGGCATGTCTACTAACTGTTTGCTGCTCTTTGCTAGCCGTCTTATGAACAACTTGGGGTACGGTCAGAATCAGATGCAACAGAATAATAATCATGGGAACTGGATGGACGAGGTTGAAAAGTGCAGTTTATACTTTGTATACTTGGGATTAGCAGTAATGCTGGTGGCTTTTTTGGAAGGTTATTGTTGGAGCAAAACCAGCGAGAGGCAGGTGCTGAAGATTCGTTACAAGTACTTGGAAGCTGTTCTTAGACAAGAAGTTGGGTTTTTCGATTCACAGGAAGCAACTACTTCGGAGGTGATCAACAGTATATCCAAAGATACGTCTCATTTACAGGAAGTTCTGAGTGAAAAGGTGCCGATATTTTTTATGCACACGTCAGTGTTCGTCTCAGGGCTTGTTTTCTCCACTTTCATGTCTTGGAGACTGTCCTTAGTCGCATTTCCAACACTACTTCTCCTGATCATACCGGGAATGATCTATGGAAAATACCTTCTTTATTTGTCTAAACAGTCATACATGGAGTATGGAAAAGCAAACACCATTGTGGAGCAAGCTCTGAGCTCCATTAAAACAGTCTATTCATTCACAGCTGAGAGGACAATTGTGGAGAGGTACTCAGCAATATTGGAGAGAACAAGCAGGCTGGGGATCAAGCAAGGGATTGCAAAAGGTCTTGCCGTAGGAAGCACAGGGCTGTCATTTGCAATATGGGCATTTCTGGCTTGGTATGGTAGCCATTTGGTGATGTATAGAGGCGAAAGTGGTGGTCGAATCTATGCTGCTGGCATCTCCTTCGTATTGAGTGGACTATCCTTGGGAATGGCACTTCCAGATTTGAGGCACTTCACAGAAGCTTCCATTGCTGCATCACGCATATTTGATAGGATTGACCGAAAACCATTGATTGATGGTGAAGACACAAAAGGAATTGTGTTGAACAACATTAGAGGTGAACTCGAATTCATAGATGTCAGATTCACATACCCTTCTCGTCCGGATTCCATTGTCCTCAAAGATTTCAATCTCAAAGTTGAAGCAGGGAAAACAATTGCACTAGTTGGAGCCAGTGGAAGTGGCAAATCCACAGCAATTGCATTGGTGCAACGCTTTTATGATGCAGATTGTGGAGTTGTTCGGATTGATGGTGTCGATATAAAGACACTTCAATTGAAGTGGATAAGATCGAAAATGGGACTTGTTAGTCAAGAACATGCCTTATTTGGTACATCAATAAAGGAAAATATCATGTTTGGGAAGCTTGATGCCAATATGGATGAAGTCACAGCTGCAGCCATGGCTGCCAATGCTCACAATTTCATAAGGCAGCTTCCTGAAGGGTATGAAACCAAGATTGGAGAGCGAGGATCACTTTTATCTGGGGGACAAAAGCAGCGGATAGCCATTGCTAGAGCAATTATCAAGAACCCTATAATTCTCTTACTAGATGAAGCAACAAGTGCTCTTGATTCTGAGTCAGAGACACTGGTCCAAAATGCTCTTGACCAAGCCTCCATGGGAAGAACCACATTGGTGGTAGCTCACAAGCTTTCTACAGTTCGAAATGCTGACCTCATTGCGGTGGTCAGTGGAGGTTGCATTATCGAAATAGGTTCGCACAACGACCTTATCAACCGTCAAAATGGGCAGTATGCAAAGCTAGCAAAGATGCAGAGGCAGTTCAGCACCTTTGATAATGTAGACCAAGACCAGAATTCTGATACACGCTTGTCTTCGGTTGCAAGAAGTAGTGCTGGCAGGTTAAGCACAGCAAGATCAAGCCCTGCAATGTTTGCAAAATCACCACTAGCAATTGAGACCCCACAATCTGCAGTACTGTCTCATCCCCCAACTTCCTTCTACCGCCTTCTCTCTTTAAACTCCCCTGAATGGAAGCAAGGCCTAATTGGAAGCCTCTCGGCGATAGCCTTTGGCTCAGTCCAACCTATCTATGCCCTCACTGTGGGGGGCATGATTTCAGCTTTCTTTGTGCAAAGCCATGAGGAAATGCGTGCAAGAATTCGAACATATTCATTGATTTTCTCTGCACTTTCCTTGGTCTCCATGACATTGAATCTTTTGCAACATTACAATTTTGCTTATATGGGTGAGCAGCTAACTAAAAGAATCCGATTGAAAATGCTACAAAAGATCTTGACCTTTGAGACAGCTTGGTTTGATGAGGAGCACAACACAAGCGGGCAATTGTGTTCAAGATTGAGCAATGAGGCTTCCATGGTGAAGTCGCTTGTGGCAGACAGGGTCTCTTTGTTGGTCCAAACCACTTCAGCCGTCACAATTGCTATGATATTGGGACTAATTGTGGCTTGGAAGCTAGCACTTGTTATGATTGCGGTCCAACCACTCACAATTCTTTGCTTCTACACCAAGAAAGTGTTGCTCTCTAGCCTTTCAGCCAATTTTGTCAAGGCACAAAACCATAGCACCCAAATTGCAGTAGAAGCTGTCTATAACCATAGAATTGTGACTTCATTTGGAAGTGTAGGGAAAGTGCTACAAATATTTGACAAAGCTCAAGAGGCGCCGAGAAAAGAGGCAAGGAAGAAGGCATGGCTGGCTGGGATTGGAATGGGGTCAGCTCAGTGCTTAACATTTATGTCATGGGCATTGGACTTTTGGTATGGTGGTAAACTAGTCAAAATGGGACAAATATCAGCTGGGGATGTGTTCAAAACATTTTTCATATTGGTTAGTACTGGTAAGGTTATAGCAGAAGCTGGGAGTATGACTTCTGATTTAGCCAAGGGTGCTACTGCAGTTGCATCTGTGTTTGAGATTCTTGACAGGCATTCACTGATACCAGGGTCACATAATGTTGGCTATGAAGATGGTACTAGTGGAATCAAGTTAGAGAAAGTAGCAGGCAAGATAGAAATGAGGAAAGTTGACTTTGCATATCCAAGCAGGCCAGAGACCCTAGTGTTGCGGCAGTTTAGCTTGGAGGTCAAGGCAGGCACAAGCATTGGACTTGTTGGGAAAAGTGGGTGCGGTAAATCAACTGTCATTGGACTGATACAAAGGTTTTATGATGTTGAGAGGGGGTCAGTGAAGGTAGATGGAGTTGATATAAGGGAGCTAGATGTTCAATGGTATAGGAAGCACACTGCCCTTGTTAGCCAAGAACCAGTGATATATTCAGGCACCATCCGCGATAACATAATGTTTGGGAAACTTGATGCTTCAGAAAATGAGGTAGCAGAGGCTGCCAGAGCTGCCAACGCTCACGAATTCATCTCAGCCTTGAAAGAAGGATATGAGACAGAATGTGGTGAAAGAGGAGTGCAGCTATCAGGAGGGCAAAAGCAAAGAATAGCAATTGCAAGAGCAATACTTAGGAACCCTACAATACTATTGCTAGATGAGGCAACAAGTGCTCTTGATGTGCAATCAGAGCACCTTGTGCAGGAAGCACTGGACCGAATCATGGTTGGAAGAACCACAATTGTGATAGCACATCGACTTAACACCATAAAAAACCTCGAGATGATTGCCTTTGTCGAAGATGGGAAGGTTATAGAGAAAGGCACTTTTGCTCAGCTCAAGCACAAGCGCGGTGCCTTCTTCAACCTTGCTAGCTGTCAAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1251

Amino Acids

137.68

Weight (kDa)

8.95

Isoelectric Point (pI)

30.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 75 - 301 2.5e-45 ABC transporter transmembrane region
ABC_tran PF00005 386 - 535 8.8e-31 ABC transporter
ABC_membrane PF00664 686 - 953 1.6e-47 ABC transporter transmembrane region
ABC_tran PF00005 1030 - 1179 1.1e-30 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 343
AasI GACNNNNNNGTC 1 cut(s) 1347
Acc36I ACCTGC 2 cut(s) 343, 1893
AccB1I GGYRCC 4 cut(s) 499, 2686, 3305, 3719
AccI GTMKAC 3 cut(s) 152, 282, 1845
AccII CGCG 2 cut(s) 3315, 3717
AccIII TCCGGA 1 cut(s) 1141
AclWI GGATC 2 cut(s) 803, 1519
AcsI RAATTY 4 cut(s) 1106, 1858, 2163, 3392
AcuI CTGAAG 4 cut(s) 380, 1500, 2415, 3330
AcyI GRCGYC 1 cut(s) 2687
AdeI CACNNNGTG 1 cut(s) 3565
AfaI GTAC 7 cut(s) 203, 377, 761, 1372, 1980, 2860, 2998
AfiI CCNNNNNNNGG 6 cut(s) 348, 1723, 2034, 2107, 3568, 3589
AflIII ACRYGT 1 cut(s) 519
AhlI ACTAGT 3 cut(s) 1201, 2797, 2999
AjiI CACGTC 1 cut(s) 522
AjnI CCWGG 2 cut(s) 10, 2965
AjuI GAANNNNNNNTTGG 2 cut(s) 1482, 1514
AleI CACNNNNGTG 4 cut(s) 524, 689, 1676, 3608
Alw21I GWGCWC 5 cut(s) 710, 1609, 2334, 3541, 3561
AlwI GGATC 2 cut(s) 803, 1519
AlwNI CAGNNNCTG 3 cut(s) 358, 2882, 3368
Ama87I CYCGRG 1 cut(s) 3644
Aor13HI TCCGGA 1 cut(s) 1141
AoxI GGCC 2 cut(s) 2044, 3071
ApoI RAATTY 4 cut(s) 1106, 1858, 2163, 3392
Asp700I GAANNNNTTC 2 cut(s) 387, 2173
AspLEI GCGC 2 cut(s) 2689, 3717
AspS9I GGNCC 4 cut(s) 1633, 2419, 2500, 3580
AsuC2I CCSGG 1 cut(s) 615
AsuHPI GGTGA 8 cut(s) 454, 901, 1070, 1109, 1938, 2264, 2395, 3446
AsuII TTCGAA 2 cut(s) 1705, 2167
AsuNHI GCTAGC 4 cut(s) 176, 1804, 2479, 3737
AvaI CYCGRG 1 cut(s) 3644
AvaII GGWCC 4 cut(s) 1633, 2419, 2500, 3580
BaeI ACNNNNGTAYC 4 cut(s) 2954, 2987, 3170, 3203
BanI GGYRCC 4 cut(s) 499, 2686, 3305, 3719
BanII GRGCYC 1 cut(s) 710
BarI GAAGNNNNNNTAC 2 cut(s) 353, 385
BbsI GAAGAC 2 cut(s) 1068, 1869
Bbv12I GWGCWC 5 cut(s) 710, 1609, 2334, 3541, 3561
BccI CCATC 9 cut(s) 134, 137, 241, 1049, 1283, 2987, 3215, 3317, 3662
BceAI ACGGC 3 cut(s) 165, 809, 2420
BcgI CGANNNNNNTGC 6 cut(s) 417, 451, 922, 956, 3635, 3669
BciT130I CCWGG 2 cut(s) 12, 2967
BclI TGATCA 2 cut(s) 444, 606
BcnI CCSGG 1 cut(s) 615
BcuI ACTAGT 3 cut(s) 1201, 2797, 2999
BfmI CTRYAG 4 cut(s) 1434, 1698, 1974, 2919
BfoI RGCGCY 1 cut(s) 2690
BfuAI ACCTGC 2 cut(s) 343, 1893
BglII AGATCT 1 cut(s) 2295
BlpI GCTNAGC 1 cut(s) 3699
BmcAI AGTACT 3 cut(s) 377, 1980, 2860
Bme1390I CCNGG 3 cut(s) 12, 615, 2967
Bme18I GGWCC 4 cut(s) 1633, 2419, 2500, 3580
BmeT110I CYCGRG 1 cut(s) 3644
BmgBI CACGTC 1 cut(s) 522
BmgT120I GGNCC 4 cut(s) 1633, 2419, 2500, 3580
BmiI GGNNCC 7 cut(s) 124, 501, 1210, 2688, 3307, 3503, 3721
BmrFI CCNGG 3 cut(s) 12, 615, 2967
BmsI GCATC 8 cut(s) 207, 942, 1022, 1252, 1399, 1803, 2936, 3331
BmtI GCTAGC 4 cut(s) 180, 1808, 2483, 3741
BoxI GACNNNNGTC 1 cut(s) 1631
BpiI GAAGAC 2 cut(s) 1068, 1869
BplI GAGNNNNNCTC 4 cut(s) 746, 778, 1086, 1118
Bpu1102I GCTNAGC 1 cut(s) 3699
Bpu14I TTCGAA 2 cut(s) 1705, 2167
BpuEI CTTGAG 2 cut(s) 2664, 3689
BpuMI CCSGG 1 cut(s) 615
BsaBI GATNNNNATC 1 cut(s) 1167
BsaHI GRCGYC 1 cut(s) 2687
BsaI GGTCTC 4 cut(s) 1955, 2209, 2413, 3071
BsaJI CCNNGG 8 cut(s) 11, 960, 1440, 1659, 2199, 2379, 2907, 2966
BsaWI WCCGGW 1 cut(s) 1141
BsaXI ACNNNNNCTCC 4 cut(s) 585, 615, 1640, 1670
Bsc4I CCNNNNNNNGG 6 cut(s) 348, 1723, 2034, 2107, 3568, 3589
Bse1I ACTGG 6 cut(s) 248, 1212, 1635, 2866, 3290, 3582
Bse3DI GCAATG 5 cut(s) 1005, 1548, 1719, 1938, 2374
Bse8I GATNNNNATC 1 cut(s) 1167
BseAI TCCGGA 1 cut(s) 1141
BseBI CCWGG 2 cut(s) 12, 2967
BseDI CCNNGG 8 cut(s) 11, 960, 1440, 1659, 2199, 2379, 2907, 2966
BseGI GGATG 5 cut(s) 252, 1426, 1987, 2833, 3309
BseJI GATNNNNATC 1 cut(s) 1167
BseLI CCNNNNNNNGG 6 cut(s) 348, 1723, 2034, 2107, 3568, 3589
BseMI GCAATG 5 cut(s) 1005, 1548, 1719, 1938, 2374
BseNI ACTGG 6 cut(s) 248, 1212, 1635, 2866, 3290, 3582
BseRI GAGGAG 2 cut(s) 2342, 3456
BseYI CCCAGC 4 cut(s) 790, 2723, 2822, 2882
BsgI GTGCAG 4 cut(s) 286, 2175, 3467, 3587
Bsh1236I CGCG 2 cut(s) 3315, 3717
BshFI GGCC 2 cut(s) 2046, 3073
BshNI GGYRCC 4 cut(s) 499, 2686, 3305, 3719
BsiHKAI GWGCWC 5 cut(s) 710, 1609, 2334, 3541, 3561
BsiHKCI CYCGRG 1 cut(s) 3644
BsiSI CCGG 2 cut(s) 614, 1142
BslFI GGGAC 4 cut(s) 1353, 1542, 2472, 2823
BslI CCNNNNNNNGG 6 cut(s) 348, 1723, 2034, 2107, 3568, 3589
BsmBI CGTCTC 2 cut(s) 474, 538
BsmFI GGGAC 4 cut(s) 1353, 1542, 2472, 2823
BsmI GAATGC 1 cut(s) 2953
BsnI GGCC 2 cut(s) 2046, 3073
Bso31I GGTCTC 4 cut(s) 1955, 2209, 2413, 3071
BsoBI CYCGRG 1 cut(s) 3644
Bsp119I TTCGAA 2 cut(s) 1705, 2167
Bsp1286I GDGCHC 5 cut(s) 710, 1609, 2334, 3541, 3561
Bsp13I TCCGGA 1 cut(s) 1141
Bsp143I GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
Bsp1720I GCTNAGC 1 cut(s) 3699
Bsp19I CCATGG 3 cut(s) 1440, 1659, 2379
BspANI GGCC 2 cut(s) 2046, 3073
BspEI TCCGGA 1 cut(s) 1141
BspFNI CGCG 2 cut(s) 3315, 3717
BspLI GGNNCC 7 cut(s) 124, 501, 1210, 2688, 3307, 3503, 3721
BspMAI CTGCAG 3 cut(s) 1438, 1978, 2923
BspMI ACCTGC 2 cut(s) 343, 1893
BspOI GCTAGC 4 cut(s) 180, 1808, 2483, 3741
BspPI GGATC 2 cut(s) 803, 1519
BspT104I TTCGAA 2 cut(s) 1705, 2167
BspT107I GGYRCC 4 cut(s) 499, 2686, 3305, 3719
BspTNI GGTCTC 4 cut(s) 1955, 2209, 2413, 3071
BsrDI GCAATG 5 cut(s) 1005, 1548, 1719, 1938, 2374
BsrI ACTGG 6 cut(s) 248, 1212, 1635, 2866, 3290, 3582
BssECI CCNNGG 8 cut(s) 11, 960, 1440, 1659, 2199, 2379, 2907, 2966
BssMI GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
BssNAI GTATAC 1 cut(s) 283
BssNI GRCGYC 1 cut(s) 2687
BssT1I CCWWGG 6 cut(s) 960, 1440, 1659, 2199, 2379, 2907
Bst1107I GTATAC 1 cut(s) 283
Bst2UI CCWGG 2 cut(s) 12, 2967
Bst6I CTCTTC 1 cut(s) 33
BstACI GRCGYC 1 cut(s) 2687
BstAPI GCANNNNNTGC 5 cut(s) 1604, 1937, 3368, 3536, 3565
BstBI TTCGAA 2 cut(s) 1705, 2167
BstDSI CCRYGG 3 cut(s) 1440, 1659, 2379
BstENI CCTNNNNNAGG 1 cut(s) 3566
BstF5I GGATG 5 cut(s) 252, 1426, 1987, 2833, 3309
BstFNI CGCG 2 cut(s) 3315, 3717
BstH2I RGCGCY 1 cut(s) 2690
BstHHI GCGC 2 cut(s) 2689, 3717
BstKTI GATC 8 cut(s) 447, 609, 624, 798, 1331, 1514, 1922, 2298
BstMBI GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
BstNI CCWGG 2 cut(s) 12, 2967
BstNSI RCATGY 2 cut(s) 151, 1361
BstPAI GACNNNNGTC 1 cut(s) 1631
BstSCI CCNGG 3 cut(s) 10, 613, 2965
BstSFI CTRYAG 4 cut(s) 1434, 1698, 1974, 2919
BstUI CGCG 2 cut(s) 3315, 3717
BstV2I GAAGAC 2 cut(s) 1068, 1869
BstX2I RGATCY 1 cut(s) 2295
BstXI CCANNNNNNTGG 1 cut(s) 1678
BstYI RGATCY 1 cut(s) 2295
BstZ17I GTATAC 1 cut(s) 283
BsuRI GGCC 2 cut(s) 2046, 3073
BtgI CCRYGG 3 cut(s) 1440, 1659, 2379
BtrI CACGTC 1 cut(s) 522
BtsCI GGATG 5 cut(s) 252, 1426, 1987, 2833, 3309
BtsI GCAGTG 1 cut(s) 3267
BveI ACCTGC 2 cut(s) 343, 1893
CaiI CAGNNNCTG 3 cut(s) 358, 2882, 3368
CfoI GCGC 2 cut(s) 2689, 3717
Cfr13I GGNCC 4 cut(s) 1633, 2419, 2500, 3580
Csp6I GTAC 7 cut(s) 202, 376, 760, 1371, 1979, 2859, 2997
CspCI CAANNNNNGTGG 4 cut(s) 1219, 1254, 1301, 1336
CviQI GTAC 7 cut(s) 202, 376, 760, 1371, 1979, 2859, 2997
DinI GGCGCC 1 cut(s) 2688
DpnI GATC 8 cut(s) 446, 608, 623, 797, 1330, 1513, 1921, 2297
DpnII GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
DraI TTTAAA 1 cut(s) 2022
DraIII CACNNNGTG 1 cut(s) 3565
DrdI GACNNNNNNGTC 1 cut(s) 1347
DseDI GACNNNNNNGTC 1 cut(s) 1347
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
Ecl136II GAGCTC 1 cut(s) 708
Eco130I CCWWGG 6 cut(s) 960, 1440, 1659, 2199, 2379, 2907
Eco147I AGGCCT 1 cut(s) 2046
Eco24I GRGCYC 1 cut(s) 710
Eco31I GGTCTC 4 cut(s) 1955, 2209, 2413, 3071
Eco47I GGWCC 4 cut(s) 1633, 2419, 2500, 3580
Eco53kI GAGCTC 1 cut(s) 708
Eco57I CTGAAG 4 cut(s) 380, 1500, 2415, 3330
Eco88I CYCGRG 1 cut(s) 3644
EcoICRI GAGCTC 1 cut(s) 708
EcoNI CCTNNNNNAGG 1 cut(s) 3566
EcoRI GAATTC 4 cut(s) 1106, 1858, 2163, 3392
EcoRII CCWGG 2 cut(s) 10, 2965
EcoT14I CCWWGG 6 cut(s) 960, 1440, 1659, 2199, 2379, 2907
EcoT38I GRGCYC 1 cut(s) 710
EgeI GGCGCC 1 cut(s) 2688
EheI GGCGCC 1 cut(s) 2688
ErhI CCWWGG 6 cut(s) 960, 1440, 1659, 2199, 2379, 2907
Esp3I CGTCTC 2 cut(s) 474, 538
FalI AAGNNNNNCTT 2 cut(s) 375, 407
FaqI GGGAC 4 cut(s) 1353, 1542, 2472, 2823
FauI CCCGC 1 cut(s) 2336
FbaI TGATCA 2 cut(s) 444, 606
FblI GTMKAC 3 cut(s) 152, 282, 1845
FokI GGATG 5 cut(s) 259, 1433, 1974, 2840, 3296
FriOI GRGCYC 1 cut(s) 710
GlaI GCGC 2 cut(s) 2688, 3716
GsaI CCCAGC 4 cut(s) 794, 2727, 2826, 2886
HaeII RGCGCY 1 cut(s) 2690
HaeIII GGCC 2 cut(s) 2046, 3073
HapII CCGG 2 cut(s) 614, 1142
HhaI GCGC 2 cut(s) 2689, 3717
Hin1I GRCGYC 1 cut(s) 2687
Hin6I GCGC 2 cut(s) 2687, 3715
HinP1I GCGC 2 cut(s) 2687, 3715
HincII GTYRAC 1 cut(s) 3052
HindII GTYRAC 1 cut(s) 3052
HindIII AAGCTT 3 cut(s) 999, 1403, 1691
HpaII CCGG 2 cut(s) 614, 1142
HphI GGTGA 8 cut(s) 454, 901, 1070, 1109, 1938, 2264, 2395, 3446
Hpy166II GTNNAC 7 cut(s) 153, 283, 953, 1100, 1846, 2795, 3052
Hpy8I GTNNAC 7 cut(s) 153, 283, 953, 1100, 1846, 2795, 3052
HpyCH4IV ACGT 2 cut(s) 467, 521
HpySE526I ACGT 2 cut(s) 467, 521
Hsp92I GRCGYC 1 cut(s) 2687
HspAI GCGC 2 cut(s) 2687, 3715
KasI GGCGCC 1 cut(s) 2686
Kpn2I TCCGGA 1 cut(s) 1141
Ksp22I TGATCA 2 cut(s) 444, 606
Kzo9I GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
LmnI GCTCC 7 cut(s) 131, 333, 694, 713, 1208, 2329, 3238
LweI GCATC 8 cut(s) 207, 942, 1022, 1252, 1399, 1803, 2936, 3331
MaeII ACGT 2 cut(s) 467, 521
MaeIII GTNAC 5 cut(s) 368, 1426, 2437, 2629, 2970
MalI GATC 8 cut(s) 446, 608, 623, 797, 1330, 1513, 1921, 2297
MboI GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
MfeI CAATTG 9 cut(s) 747, 1194, 1236, 1313, 1956, 2348, 2442, 3480, 3606
MflI RGATCY 1 cut(s) 2295
MhlI GDGCHC 5 cut(s) 710, 1609, 2334, 3541, 3561
Mly113I GGCGCC 1 cut(s) 2687
MlyI GAGTC 1 cut(s) 1628
MmeI TCCRAC 6 cut(s) 311, 614, 1186, 2110, 2527, 3574
MroI TCCGGA 1 cut(s) 1141
MroXI GAANNNNTTC 2 cut(s) 387, 2173
MseI TTAA 6 cut(s) 714, 1907, 2021, 2753, 3627, 3751
MslI CAYNNNNRTG 6 cut(s) 524, 557, 689, 1676, 1724, 3608
MspA1I CMGCKG 4 cut(s) 737, 1433, 1540, 2822
MspI CCGG 2 cut(s) 614, 1142
MspR9I CCNGG 3 cut(s) 12, 615, 2967
MunI CAATTG 9 cut(s) 747, 1194, 1236, 1313, 1956, 2348, 2442, 3480, 3606
Mva1269I GAATGC 1 cut(s) 2953
MvaI CCWGG 2 cut(s) 12, 2967
MvnI CGCG 2 cut(s) 3315, 3717
NarI GGCGCC 1 cut(s) 2687
NciI CCSGG 1 cut(s) 615
NcoI CCATGG 3 cut(s) 1440, 1659, 2379
NdeII GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
NheI GCTAGC 4 cut(s) 176, 1804, 2479, 3737
NlaIV GGNNCC 7 cut(s) 124, 501, 1210, 2688, 3307, 3503, 3721
NmeAIII GCCGAG 2 cut(s) 2042, 2715
NmuCI GTSAC 4 cut(s) 1426, 2437, 2629, 2970
NspI RCATGY 2 cut(s) 151, 1361
NspV TTCGAA 2 cut(s) 1705, 2167
OliI CACNNNNGTG 4 cut(s) 524, 689, 1676, 3608
PaeR7I CTCGAG 1 cut(s) 3644
PaqCI CACCTGC 1 cut(s) 343
PceI AGGCCT 1 cut(s) 2046
PctI GAATGC 1 cut(s) 2953
PdmI GAANNNNTTC 2 cut(s) 387, 2173
PflFI GACNNNGTC 1 cut(s) 2405
PleI GAGTC 1 cut(s) 1627
PluTI GGCGCC 1 cut(s) 2690
PpsI GAGTC 1 cut(s) 1627
PshAI GACNNNNGTC 1 cut(s) 1631
Psp124BI GAGCTC 1 cut(s) 710
Psp6I CCWGG 2 cut(s) 10, 2965
PspFI CCCAGC 4 cut(s) 790, 2723, 2822, 2882
PspGI CCWGG 2 cut(s) 10, 2965
PspN4I GGNNCC 7 cut(s) 124, 501, 1210, 2688, 3307, 3503, 3721
PspPI GGNCC 4 cut(s) 1633, 2419, 2500, 3580
PstI CTGCAG 3 cut(s) 1438, 1978, 2923
PstNI CAGNNNCTG 3 cut(s) 358, 2882, 3368
PsuI RGATCY 1 cut(s) 2295
PsyI GACNNNGTC 1 cut(s) 2405
PvuII CAGCTG 3 cut(s) 737, 1433, 2822
RsaI GTAC 7 cut(s) 203, 377, 761, 1372, 1980, 2860, 2998
RsaNI GTAC 7 cut(s) 202, 376, 760, 1371, 1979, 2859, 2997
RseI CAYNNNNRTG 6 cut(s) 524, 557, 689, 1676, 1724, 3608
SacI GAGCTC 1 cut(s) 710
SaqAI TTAA 6 cut(s) 714, 1907, 2021, 2753, 3627, 3751
Sau3AI GATC 8 cut(s) 444, 606, 621, 795, 1328, 1511, 1919, 2295
Sau96I GGNCC 4 cut(s) 1633, 2419, 2500, 3580
ScaI AGTACT 3 cut(s) 377, 1980, 2860
SchI GAGTC 1 cut(s) 1628
ScrFI CCNGG 3 cut(s) 12, 615, 2967
SduI GDGCHC 5 cut(s) 710, 1609, 2334, 3541, 3561
SfaNI GCATC 8 cut(s) 207, 942, 1022, 1252, 1399, 1803, 2936, 3331
SfcI CTRYAG 4 cut(s) 1434, 1698, 1974, 2919
SfoI GGCGCC 1 cut(s) 2688
Sfr274I CTCGAG 1 cut(s) 3644
SfuI TTCGAA 2 cut(s) 1705, 2167
SinI GGWCC 4 cut(s) 1633, 2419, 2500, 3580
SlaI CTCGAG 1 cut(s) 3644
SmiMI CAYNNNNRTG 6 cut(s) 524, 557, 689, 1676, 1724, 3608
SmlI CTYRAG 3 cut(s) 2679, 3644, 3704
SmoI CTYRAG 3 cut(s) 2679, 3644, 3704
SpeI ACTAGT 3 cut(s) 1201, 2797, 2999
SseBI AGGCCT 1 cut(s) 2046
SspDI GGCGCC 1 cut(s) 2686
SspI AATATT 2 cut(s) 771, 2667
SstI GAGCTC 1 cut(s) 710
StuI AGGCCT 1 cut(s) 2046
StyD4I CCNGG 3 cut(s) 10, 613, 2965
StyI CCWWGG 6 cut(s) 960, 1440, 1659, 2199, 2379, 2907
TaiI ACGT 2 cut(s) 470, 524
TaqII GACCGA 2 cut(s) 1053, 3597
TatI WGTACW 3 cut(s) 375, 1978, 2858
TauI GCSGC 1 cut(s) 3094
Tru1I TTAA 6 cut(s) 714, 1907, 2021, 2753, 3627, 3751
Tru9I TTAA 6 cut(s) 714, 1907, 2021, 2753, 3627, 3751
TseFI GTSAC 4 cut(s) 1426, 2437, 2629, 2970
Tsp45I GTSAC 4 cut(s) 1426, 2437, 2629, 2970
Tth111I GACNNNGTC 1 cut(s) 2405
VpaK11BI GGWCC 4 cut(s) 1633, 2419, 2500, 3580
XagI CCTNNNNNAGG 1 cut(s) 3566
XapI RAATTY 4 cut(s) 1106, 1858, 2163, 3392
XceI RCATGY 2 cut(s) 151, 1361
XhoI CTCGAG 1 cut(s) 3644
XmiI GTMKAC 3 cut(s) 152, 282, 1845
XmnI GAANNNNTTC 2 cut(s) 387, 2173
ZrmI AGTACT 3 cut(s) 377, 1980, 2860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.