ABC transporter B family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 36 - 314 | 1.1e-45 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 385 - 538 | 1.2e-32 | ABC transporter |
| ABC_membrane | PF00664 | 690 - 959 | 1e-35 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1029 - 1180 | 1.5e-31 | ABC transporter |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 464, 1999 |
| Acc16I | TGCGCA | 1 cut(s) | 2763 |
| AccB1I | GGYRCC | 3 cut(s) | 493, 896, 2363 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2466 |
| AccBSI | CCGCTC | 1 cut(s) | 197 |
| AccI | GTMKAC | 2 cut(s) | 2044, 3348 |
| AccII | CGCG | 7 cut(s) | 74, 148, 530, 2153, 2698, 3542, 3725 |
| AclI | AACGTT | 1 cut(s) | 521 |
| AclWI | GGATC | 9 cut(s) | 1705, 1774, 1835, 2355, 2413, 3025, 3154, 3185, 3337 |
| AcoI | YGGCCR | 6 cut(s) | 567, 816, 2382, 2827, 2881, 3372 |
| AcsI | RAATTY | 4 cut(s) | 1115, 1157, 2353, 2673 |
| AcuI | CTGAAG | 3 cut(s) | 998, 1011, 2643 |
| AcyI | GRCGYC | 1 cut(s) | 290 |
| AdeI | CACNNNGTG | 1 cut(s) | 3432 |
| AflIII | ACRYGT | 1 cut(s) | 93 |
| AgeI | ACCGGT | 1 cut(s) | 1745 |
| AgsI | TTSAA | 7 cut(s) | 376, 1787, 2105, 2327, 2855, 3103, 3110 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2475 |
| AhlI | ACTAGT | 3 cut(s) | 1033, 1886, 1961 |
| AjiI | CACGTC | 1 cut(s) | 2833 |
| AjnI | CCWGG | 3 cut(s) | 607, 1937, 2124 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2658, 2690 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1260, 1292 |
| Alw26I | GTCTC | 2 cut(s) | 337, 1826 |
| AlwI | GGATC | 9 cut(s) | 1705, 1774, 1835, 2355, 2413, 3025, 3154, 3185, 3337 |
| Ama87I | CYCGRG | 4 cut(s) | 1930, 1971, 3489, 3581 |
| ApaI | GGGCCC | 2 cut(s) | 2708, 3723 |
| ApoI | RAATTY | 4 cut(s) | 1115, 1157, 2353, 2673 |
| AseI | ATTAAT | 2 cut(s) | 2235, 3173 |
| AsiGI | ACCGGT | 1 cut(s) | 1745 |
| AspLEI | GCGC | 8 cut(s) | 76, 1616, 2132, 2764, 3542, 3544, 3580, 3622 |
| AspS9I | GGNCC | 7 cut(s) | 1651, 2704, 2705, 2917, 2965, 3719, 3720 |
| AsuC2I | CCSGG | 3 cut(s) | 676, 3490, 3491 |
| AsuHPI | GGTGA | 6 cut(s) | 497, 1019, 1159, 1523, 2429, 2764 |
| AsuNHI | GCTAGC | 2 cut(s) | 167, 1454 |
| AvaI | CYCGRG | 4 cut(s) | 1930, 1971, 3489, 3581 |
| AvaII | GGWCC | 2 cut(s) | 2917, 2965 |
| AxyI | CCTNAGG | 1 cut(s) | 901 |
| BaeGI | GKGCMC | 2 cut(s) | 2708, 3723 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1491, 1524 |
| BalI | TGGCCA | 3 cut(s) | 569, 818, 2384 |
| BanI | GGYRCC | 3 cut(s) | 493, 896, 2363 |
| BanII | GRGCYC | 3 cut(s) | 2708, 2988, 3723 |
| BauI | CACGAG | 1 cut(s) | 3430 |
| BbvCI | CCTCAGC | 1 cut(s) | 3590 |
| BccI | CCATC | 9 cut(s) | 128, 1135, 1277, 1412, 2328, 2654, 2867, 3170, 3410 |
| BceAI | ACGGC | 7 cut(s) | 143, 1652, 1718, 2501, 2570, 2842, 3141 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1605, 1639, 3312, 3346 |
| BciT130I | CCWGG | 3 cut(s) | 609, 1939, 2126 |
| BciVI | GTATCC | 2 cut(s) | 1487, 3413 |
| BcnI | CCSGG | 3 cut(s) | 676, 3490, 3491 |
| BcoDI | GTCTC | 2 cut(s) | 337, 1826 |
| BcuI | ACTAGT | 3 cut(s) | 1033, 1886, 1961 |
| BfmI | CTRYAG | 1 cut(s) | 744 |
| BfoI | RGCGCY | 2 cut(s) | 2133, 3581 |
| BfuI | GTATCC | 2 cut(s) | 1487, 3413 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 692 |
| BlpI | GCTNAGC | 1 cut(s) | 1000 |
| BmcAI | AGTACT | 6 cut(s) | 264, 1885, 1960, 1966, 3498, 3634 |
| Bme1390I | CCNGG | 6 cut(s) | 609, 676, 1939, 2126, 3490, 3491 |
| Bme18I | GGWCC | 2 cut(s) | 2917, 2965 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2475 |
| BmeT110I | CYCGRG | 4 cut(s) | 1930, 1971, 3489, 3581 |
| BmgBI | CACGTC | 1 cut(s) | 2833 |
| BmgT120I | GGNCC | 7 cut(s) | 1651, 2704, 2705, 2917, 2965, 3719, 3720 |
| BmrFI | CCNGG | 6 cut(s) | 609, 676, 1939, 2126, 3490, 3491 |
| BmsI | GCATC | 4 cut(s) | 456, 1152, 2778, 2887 |
| BmtI | GCTAGC | 2 cut(s) | 171, 1458 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1932, 3608 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2547, 2579, 2591, 2623 |
| BpmI | CTGGAG | 1 cut(s) | 750 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1213, 1319, 3590 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1000 |
| BpuEI | CTTGAG | 4 cut(s) | 1283, 1295, 1473, 2663 |
| BpuMI | CCSGG | 3 cut(s) | 676, 3490, 3491 |
| BsaAI | YACGTR | 2 cut(s) | 2266, 2711 |
| BsaBI | GATNNNNATC | 2 cut(s) | 142, 2237 |
| BsaHI | GRCGYC | 1 cut(s) | 290 |
| BsaWI | WCCGGW | 5 cut(s) | 635, 869, 1745, 2047, 2967 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1056, 1086, 1260, 1290, 3677, 3707 |
| Bse118I | RCCGGY | 2 cut(s) | 171, 1745 |
| Bse1I | ACTGG | 4 cut(s) | 570, 1999, 2385, 2884 |
| Bse21I | CCTNAGG | 1 cut(s) | 901 |
| Bse3DI | GCAATG | 7 cut(s) | 590, 834, 960, 984, 1465, 1557, 3318 |
| Bse8I | GATNNNNATC | 2 cut(s) | 142, 2237 |
| BseBI | CCWGG | 3 cut(s) | 609, 1939, 2126 |
| BseGI | GGATG | 9 cut(s) | 428, 468, 1114, 1146, 1288, 1423, 2121, 2339, 3421 |
| BseJI | GATNNNNATC | 2 cut(s) | 142, 2237 |
| BseMI | GCAATG | 7 cut(s) | 590, 834, 960, 984, 1465, 1557, 3318 |
| BseMII | CTCAG | 9 cut(s) | 228, 945, 1014, 1227, 1517, 1545, 2673, 2988, 3581 |
| BseNI | ACTGG | 4 cut(s) | 570, 1999, 2385, 2884 |
| BsePI | GCGCGC | 1 cut(s) | 3540 |
| BseRI | GAGGAG | 4 cut(s) | 1427, 1798, 2357, 2768 |
| BseSI | GKGCMC | 2 cut(s) | 2708, 3723 |
| BseYI | CCCAGC | 1 cut(s) | 784 |
| BsgI | GTGCAG | 6 cut(s) | 30, 752, 780, 948, 3470, 3590 |
| Bsh1236I | CGCG | 7 cut(s) | 74, 148, 530, 2153, 2698, 3542, 3725 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2048, 3223 |
| BshNI | GGYRCC | 3 cut(s) | 493, 896, 2363 |
| BshTI | ACCGGT | 1 cut(s) | 1745 |
| BsiEI | CGRYCG | 2 cut(s) | 2048, 3223 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1930, 1971, 3489, 3581 |
| BslFI | GGGAC | 9 cut(s) | 590, 591, 691, 787, 922, 1022, 1920, 3452, 3477 |
| BsmAI | GTCTC | 2 cut(s) | 337, 1826 |
| BsmBI | CGTCTC | 1 cut(s) | 1826 |
| BsmFI | GGGAC | 9 cut(s) | 590, 591, 691, 787, 922, 1022, 1920, 3452, 3477 |
| BsmI | GAATGC | 1 cut(s) | 722 |
| BsoBI | CYCGRG | 4 cut(s) | 1930, 1971, 3489, 3581 |
| Bsp120I | GGGCCC | 2 cut(s) | 2704, 3719 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2708, 2988, 3723 |
| Bsp1407I | TGTACA | 2 cut(s) | 2437, 3637 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1000 |
| Bsp19I | CCATGG | 1 cut(s) | 570 |
| Bsp68I | TCGCGA | 1 cut(s) | 2153 |
| BspCNI | CTCAG | 9 cut(s) | 227, 944, 1013, 1226, 1516, 1544, 2672, 2989, 3582 |
| BspFNI | CGCG | 7 cut(s) | 74, 148, 530, 2153, 2698, 3542, 3725 |
| BspHI | TCATGA | 1 cut(s) | 3391 |
| BspOI | GCTAGC | 2 cut(s) | 171, 1458 |
| BspPI | GGATC | 9 cut(s) | 1705, 1774, 1835, 2355, 2413, 3025, 3154, 3185, 3337 |
| BspQI | GCTCTTC | 1 cut(s) | 1770 |
| BspT107I | GGYRCC | 3 cut(s) | 493, 896, 2363 |
| BsrBI | CCGCTC | 1 cut(s) | 197 |
| BsrDI | GCAATG | 7 cut(s) | 590, 834, 960, 984, 1465, 1557, 3318 |
| BsrFI | RCCGGY | 2 cut(s) | 171, 1745 |
| BsrGI | TGTACA | 2 cut(s) | 2437, 3637 |
| BsrI | ACTGG | 4 cut(s) | 570, 1999, 2385, 2884 |
| BssAI | RCCGGY | 2 cut(s) | 171, 1745 |
| BssHII | GCGCGC | 1 cut(s) | 3540 |
| BssNI | GRCGYC | 1 cut(s) | 290 |
| BssSI | CACGAG | 1 cut(s) | 3430 |
| BssT1I | CCWWGG | 3 cut(s) | 285, 570, 1194 |
| Bst2BI | CACGAG | 1 cut(s) | 3430 |
| Bst2UI | CCWGG | 3 cut(s) | 609, 1939, 2126 |
| Bst6I | CTCTTC | 8 cut(s) | 11, 644, 649, 654, 1398, 1404, 1770, 3706 |
| BstACI | GRCGYC | 1 cut(s) | 290 |
| BstAUI | TGTACA | 2 cut(s) | 2437, 3637 |
| BstBAI | YACGTR | 2 cut(s) | 2266, 2711 |
| BstDSI | CCRYGG | 4 cut(s) | 570, 892, 1668, 3723 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1658 |
| BstF5I | GGATG | 9 cut(s) | 428, 468, 1114, 1146, 1288, 1423, 2121, 2339, 3421 |
| BstFNI | CGCG | 7 cut(s) | 74, 148, 530, 2153, 2698, 3542, 3725 |
| BstH2I | RGCGCY | 2 cut(s) | 2133, 3581 |
| BstHHI | GCGC | 8 cut(s) | 76, 1616, 2132, 2764, 3542, 3544, 3580, 3622 |
| BstMAI | GTCTC | 2 cut(s) | 337, 1826 |
| BstMCI | CGRYCG | 2 cut(s) | 2048, 3223 |
| BstNI | CCWGG | 3 cut(s) | 609, 1939, 2126 |
| BstNSI | RCATGY | 6 cut(s) | 80, 97, 419, 999, 1525, 2815 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1932, 3608 |
| BstSCI | CCNGG | 6 cut(s) | 607, 674, 1937, 2124, 3488, 3489 |
| BstSFI | CTRYAG | 1 cut(s) | 744 |
| BstSLI | GKGCMC | 2 cut(s) | 2708, 3723 |
| BstUI | CGCG | 7 cut(s) | 74, 148, 530, 2153, 2698, 3542, 3725 |
| BstX2I | RGATCY | 2 cut(s) | 1840, 2405 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1618 |
| BstYI | RGATCY | 2 cut(s) | 1840, 2405 |
| Bsu36I | CCTNAGG | 1 cut(s) | 901 |
| BsuI | GTATCC | 2 cut(s) | 1487, 3413 |
| BtgI | CCRYGG | 4 cut(s) | 570, 892, 1668, 3723 |
| BtgZI | GCGATG | 3 cut(s) | 129, 511, 1675 |
| BtrI | CACGTC | 1 cut(s) | 2833 |
| BtsCI | GGATG | 9 cut(s) | 428, 468, 1114, 1146, 1288, 1423, 2121, 2339, 3421 |
| BtsI | GCAGTG | 4 cut(s) | 1344, 1575, 1873, 2649 |
| BtsIMutI | CAGTG | 7 cut(s) | 1233, 1344, 1575, 1873, 2391, 2649, 2962 |
| BtuMI | TCGCGA | 1 cut(s) | 2153 |
| CciI | TCATGA | 1 cut(s) | 3391 |
| CfoI | GCGC | 8 cut(s) | 76, 1616, 2132, 2764, 3542, 3544, 3580, 3622 |
| Cfr10I | RCCGGY | 2 cut(s) | 171, 1745 |
| Cfr13I | GGNCC | 7 cut(s) | 1651, 2704, 2705, 2917, 2965, 3719, 3720 |
| Cfr42I | CCGCGG | 1 cut(s) | 3726 |
| Cfr9I | CCCGGG | 1 cut(s) | 3489 |
| CseI | GACGC | 4 cut(s) | 233, 279, 2704, 3598 |
| CspAI | ACCGGT | 1 cut(s) | 1745 |
| DraIII | CACNNNGTG | 1 cut(s) | 3432 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 464, 1999 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2475 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 464, 1999 |
| EaeI | YGGCCR | 6 cut(s) | 567, 816, 2382, 2827, 2881, 3372 |
| Eam1104I | CTCTTC | 8 cut(s) | 11, 644, 649, 654, 1398, 1404, 1770, 3706 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2475 |
| EarI | CTCTTC | 8 cut(s) | 11, 644, 649, 654, 1398, 1404, 1770, 3706 |
| EciI | GGCGGA | 1 cut(s) | 3371 |
| Eco130I | CCWWGG | 3 cut(s) | 285, 570, 1194 |
| Eco24I | GRGCYC | 3 cut(s) | 2708, 2988, 3723 |
| Eco32I | GATATC | 1 cut(s) | 1233 |
| Eco47I | GGWCC | 2 cut(s) | 2917, 2965 |
| Eco57I | CTGAAG | 3 cut(s) | 998, 1011, 2643 |
| Eco81I | CCTNAGG | 1 cut(s) | 901 |
| Eco88I | CYCGRG | 4 cut(s) | 1930, 1971, 3489, 3581 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1658 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1651, 3719 |
| EcoRI | GAATTC | 1 cut(s) | 2353 |
| EcoRII | CCWGG | 3 cut(s) | 607, 1937, 2124 |
| EcoRV | GATATC | 1 cut(s) | 1233 |
| EcoT14I | CCWWGG | 3 cut(s) | 285, 570, 1194 |
| EcoT22I | ATGCAT | 1 cut(s) | 724 |
| EcoT38I | GRGCYC | 3 cut(s) | 2708, 2988, 3723 |
| ErhI | CCWWGG | 3 cut(s) | 285, 570, 1194 |
| Esp3I | CGTCTC | 1 cut(s) | 1826 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 465, 497, 785, 817, 2896, 2928 |
| FaqI | GGGAC | 9 cut(s) | 590, 591, 691, 787, 922, 1022, 1920, 3452, 3477 |
| FauI | CCCGC | 6 cut(s) | 523, 3398, 3428, 3589, 3718, 3730 |
| FauNDI | CATATG | 2 cut(s) | 1475, 3325 |
| FblI | GTMKAC | 2 cut(s) | 2044, 3348 |
| FokI | GGATG | 9 cut(s) | 415, 455, 1121, 1133, 1295, 1430, 2108, 2346, 3428 |
| FriOI | GRGCYC | 3 cut(s) | 2708, 2988, 3723 |
| FspI | TGCGCA | 1 cut(s) | 2763 |
| GlaI | GCGC | 8 cut(s) | 75, 1615, 2131, 2763, 3541, 3543, 3579, 3621 |
| GsaI | CCCAGC | 1 cut(s) | 788 |
| GsuI | CTGGAG | 1 cut(s) | 750 |
| HaeII | RGCGCY | 2 cut(s) | 2133, 3581 |
| HgaI | GACGC | 4 cut(s) | 233, 279, 2704, 3598 |
| HhaI | GCGC | 8 cut(s) | 76, 1616, 2132, 2764, 3542, 3544, 3580, 3622 |
| Hin1I | GRCGYC | 1 cut(s) | 290 |
| Hin6I | GCGC | 8 cut(s) | 74, 1614, 2130, 2762, 3540, 3542, 3578, 3620 |
| HinP1I | GCGC | 8 cut(s) | 74, 1614, 2130, 2762, 3540, 3542, 3578, 3620 |
| HincII | GTYRAC | 5 cut(s) | 519, 940, 2045, 3349, 3748 |
| HindII | GTYRAC | 5 cut(s) | 519, 940, 2045, 3349, 3748 |
| HindIII | AAGCTT | 2 cut(s) | 2495, 2612 |
| HphI | GGTGA | 6 cut(s) | 497, 1019, 1159, 1523, 2429, 2764 |
| Hpy166II | GTNNAC | 8 cut(s) | 91, 519, 940, 1538, 1707, 2045, 3349, 3748 |
| Hpy8I | GTNNAC | 8 cut(s) | 91, 519, 940, 1538, 1707, 2045, 3349, 3748 |
| HpyCH4IV | ACGT | 4 cut(s) | 521, 2265, 2710, 2832 |
| HpySE526I | ACGT | 4 cut(s) | 521, 2265, 2710, 2832 |
| Hsp92I | GRCGYC | 1 cut(s) | 290 |
| HspAI | GCGC | 8 cut(s) | 74, 1614, 2130, 2762, 3540, 3542, 3578, 3620 |
| KspI | CCGCGG | 1 cut(s) | 3726 |
| LguI | GCTCTTC | 1 cut(s) | 1770 |
| LmnI | GCTCC | 7 cut(s) | 68, 122, 209, 833, 959, 2096, 2612 |
| LweI | GCATC | 4 cut(s) | 456, 1152, 2778, 2887 |
| MaeII | ACGT | 4 cut(s) | 521, 2265, 2710, 2832 |
| MaeIII | GTNAC | 8 cut(s) | 401, 418, 439, 533, 1323, 2417, 2833, 2872 |
| MbiI | CCGCTC | 1 cut(s) | 197 |
| MfeI | CAATTG | 2 cut(s) | 1481, 2782 |
| MflI | RGATCY | 2 cut(s) | 1840, 2405 |
| MhlI | GDGCHC | 3 cut(s) | 2708, 2988, 3723 |
| MlsI | TGGCCA | 3 cut(s) | 569, 818, 2384 |
| MluNI | TGGCCA | 3 cut(s) | 569, 818, 2384 |
| MlyI | GAGTC | 6 cut(s) | 100, 573, 1616, 1922, 1942, 2050 |
| MmeI | TCCRAC | 6 cut(s) | 305, 593, 996, 1849, 2311, 3360 |
| Mox20I | TGGCCA | 3 cut(s) | 569, 818, 2384 |
| Mph1103I | ATGCAT | 1 cut(s) | 724 |
| MscI | TGGCCA | 3 cut(s) | 569, 818, 2384 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2396 |
| Msp20I | TGGCCA | 3 cut(s) | 569, 818, 2384 |
| MspA1I | CMGCKG | 4 cut(s) | 1004, 3405, 3512, 3725 |
| MspR9I | CCNGG | 6 cut(s) | 609, 676, 1939, 2126, 3490, 3491 |
| MunI | CAATTG | 2 cut(s) | 1481, 2782 |
| Mva1269I | GAATGC | 1 cut(s) | 722 |
| MvaI | CCWGG | 3 cut(s) | 609, 1939, 2126 |
| MvnI | CGCG | 7 cut(s) | 74, 148, 530, 2153, 2698, 3542, 3725 |
| NciI | CCSGG | 3 cut(s) | 676, 3490, 3491 |
| NcoI | CCATGG | 1 cut(s) | 570 |
| NdeI | CATATG | 2 cut(s) | 1475, 3325 |
| NheI | GCTAGC | 2 cut(s) | 167, 1454 |
| NmeAIII | GCCGAG | 1 cut(s) | 712 |
| NmuCI | GTSAC | 4 cut(s) | 439, 1323, 2417, 2833 |
| NruI | TCGCGA | 1 cut(s) | 2153 |
| NsbI | TGCGCA | 1 cut(s) | 2763 |
| NsiI | ATGCAT | 1 cut(s) | 724 |
| NspI | RCATGY | 6 cut(s) | 80, 97, 419, 999, 1525, 2815 |
| PaeI | GCATGC | 4 cut(s) | 80, 999, 1525, 2815 |
| PaeR7I | CTCGAG | 2 cut(s) | 1930, 3581 |
| PagI | TCATGA | 1 cut(s) | 3391 |
| PasI | CCCWGGG | 1 cut(s) | 1938 |
| PauI | GCGCGC | 1 cut(s) | 3540 |
| PciI | ACATGT | 1 cut(s) | 93 |
| PciSI | GCTCTTC | 1 cut(s) | 1770 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3345 |
| PctI | GAATGC | 1 cut(s) | 722 |
| PfeI | GAWTC | 6 cut(s) | 138, 1049, 1587, 1628, 2118, 3183 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2466 |
| PinAI | ACCGGT | 1 cut(s) | 1745 |
| PleI | GAGTC | 6 cut(s) | 100, 573, 1616, 1922, 1941, 2049 |
| PpsI | GAGTC | 6 cut(s) | 100, 573, 1616, 1922, 1941, 2049 |
| Ppu21I | YACGTR | 2 cut(s) | 2266, 2711 |
| PscI | ACATGT | 1 cut(s) | 93 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1932, 3608 |
| PshBI | ATTAAT | 2 cut(s) | 2235, 3173 |
| Psp1406I | AACGTT | 1 cut(s) | 521 |
| Psp6I | CCWGG | 3 cut(s) | 607, 1937, 2124 |
| PspFI | CCCAGC | 1 cut(s) | 784 |
| PspGI | CCWGG | 3 cut(s) | 607, 1937, 2124 |
| PspOMI | GGGCCC | 2 cut(s) | 2704, 3719 |
| PspPI | GGNCC | 7 cut(s) | 1651, 2704, 2705, 2917, 2965, 3719, 3720 |
| PspXI | VCTCGAGB | 1 cut(s) | 1930 |
| PsuI | RGATCY | 2 cut(s) | 1840, 2405 |
| PteI | GCGCGC | 1 cut(s) | 3540 |
| PvuII | CAGCTG | 1 cut(s) | 1004 |
| RruI | TCGCGA | 1 cut(s) | 2153 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2396 |
| SacII | CCGCGG | 1 cut(s) | 3726 |
| SalI | GTCGAC | 2 cut(s) | 2043, 3347 |
| SapI | GCTCTTC | 1 cut(s) | 1770 |
| Sau96I | GGNCC | 7 cut(s) | 1651, 2704, 2705, 2917, 2965, 3719, 3720 |
| ScaI | AGTACT | 6 cut(s) | 264, 1885, 1960, 1966, 3498, 3634 |
| SchI | GAGTC | 6 cut(s) | 100, 573, 1616, 1922, 1942, 2050 |
| ScrFI | CCNGG | 6 cut(s) | 609, 676, 1939, 2126, 3490, 3491 |
| SduI | GDGCHC | 3 cut(s) | 2708, 2988, 3723 |
| SfaNI | GCATC | 4 cut(s) | 456, 1152, 2778, 2887 |
| SfcI | CTRYAG | 1 cut(s) | 744 |
| Sfr274I | CTCGAG | 2 cut(s) | 1930, 3581 |
| Sfr303I | CCGCGG | 1 cut(s) | 3726 |
| SgrBI | CCGCGG | 1 cut(s) | 3726 |
| SinI | GGWCC | 2 cut(s) | 2917, 2965 |
| SlaI | CTCGAG | 2 cut(s) | 1930, 3581 |
| SmaI | CCCGGG | 1 cut(s) | 3491 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2396 |
| SmlI | CTYRAG | 6 cut(s) | 1262, 1310, 1488, 1930, 2678, 3581 |
| SmoI | CTYRAG | 6 cut(s) | 1262, 1310, 1488, 1930, 2678, 3581 |
| SpeI | ACTAGT | 3 cut(s) | 1033, 1886, 1961 |
| SphI | GCATGC | 4 cut(s) | 80, 999, 1525, 2815 |
| SrfI | GCCCGGGC | 1 cut(s) | 3491 |
| SspI | AATATT | 1 cut(s) | 1084 |
| StyD4I | CCNGG | 6 cut(s) | 607, 674, 1937, 2124, 3488, 3489 |
| StyI | CCWWGG | 3 cut(s) | 285, 570, 1194 |
| TaiI | ACGT | 4 cut(s) | 524, 2268, 2713, 2835 |
| TauI | GCSGC | 3 cut(s) | 1309, 2621, 3374 |
| TfiI | GAWTC | 6 cut(s) | 138, 1049, 1587, 1628, 2118, 3183 |
| TscAI | CASTG | 7 cut(s) | 1233, 1344, 1575, 1880, 2398, 2656, 2962 |
| TseFI | GTSAC | 4 cut(s) | 439, 1323, 2417, 2833 |
| Tsp45I | GTSAC | 4 cut(s) | 439, 1323, 2417, 2833 |
| TspDTI | ATGAA | 6 cut(s) | 262, 514, 1462, 1788, 2110, 3388 |
| TspGWI | ACGGA | 7 cut(s) | 99, 273, 1808, 2130, 2171, 2206, 3490 |
| TspMI | CCCGGG | 1 cut(s) | 3489 |
| TspRI | CASTG | 7 cut(s) | 1233, 1344, 1575, 1880, 2398, 2656, 2962 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2466 |
| VpaK11BI | GGWCC | 2 cut(s) | 2917, 2965 |
| VspI | ATTAAT | 2 cut(s) | 2235, 3173 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1658 |
| XapI | RAATTY | 4 cut(s) | 1115, 1157, 2353, 2673 |
| XbaI | TCTAGA | 1 cut(s) | 2375 |
| XceI | RCATGY | 6 cut(s) | 80, 97, 419, 999, 1525, 2815 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 479, 1615, 2866 |
| XhoI | CTCGAG | 2 cut(s) | 1930, 3581 |
| XmaI | CCCGGG | 1 cut(s) | 3489 |
| XmiI | GTMKAC | 2 cut(s) | 2044, 3348 |
| ZrmI | AGTACT | 6 cut(s) | 264, 1885, 1960, 1966, 3498, 3634 |
| Zsp2I | ATGCAT | 1 cut(s) | 724 |