Rh4BG322400

Multidrug resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
48812769 .. 48827343
14575 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG322400.1

Sequence Viewer

Length: 3099 bp
ATGAAAGGTTTGTCCAAGAAAGTGCAAAAAGCACAAATTAAGAGCAGTCAACAAGCAAGTGAAGCCACCATCAACCATAGAAATATCACTGAATCTTCGTCTCAGAAAAGGATAATGAGACTCTTTATAACTCCAACATATTGGTATGGAGGGAGGCTAATGAACAAAGGCTTCATAATTGCAGAGCACGTGTTTCAAACTTTCTTCTTATTGATGAGCACTGGTAAAAGCATTGCAGGTGCTGGAAGTTTGACCACTGATTTGGCCAAAGGCTACAATGCCCTGCTAGCAGTGTTTTCTATCCTAGATAGGTCAAGTGAGATTCAGCCTGATGAAGGCAATAAGGTGCAAAAGACTATTAAAGGCCACATAGAACTGAAGAATGTGTTTTTCTCTTACCCAGCAAGGCCAAAACAAATGATCTTCAAGGGCTTGAATCTCACGATTGAAGCTGGAAGAACAATGGCATTAGTGGGACAGTGTTTCAGGTTAGAGATGGGGAAGAAAGGTGGGTTGTTCAGGTATGCAGATGGTGTTGACAAGTTACTGATGGTGTTTGGAACTTTGGGTAGCATTGGAGATGGGTTGATGACACCTCTTACAATGTTTGTGCTCAGCCGCGTCATCAATGAGTATGGAGCTGCAACTCTTACTTTCTCTAACGACATTGTCGACGAGTACTCACTCAAGCTGCTCAGTGTAGCAATTGGAGTTGGAATATCTGCTTTCATTGAAGGGTTTTGTTGGACCAGAACTGCTGAGAGACAGACATCCAGAATGAGAATGGAATACTTAAAATCAGTCCTTAGGCAAGACGTTGCGTTCTTTGACAGTCAAGCAAATTCTTCCATGACCTTCCAAGTCATTTCCACAATCTCTTCTGATGCTCATTTTATCCAAGACACAATAGCTGAGAAGCTACCAAATTGCCTGGCTCACCTCTCATCATTTCTGTTCTGCTTTCCTGTTGCCTTTGTGCTTTCTTGGAGATTGGCACTGGCTGCTCTTCCATTCTCGGTCATGTTTATCATCCCCGGATTGGGATTTGGGAAGGTAATGCAAGACTTAGGAGTTAAGATAAATGGTGCCTATGGAGTTGCTGGAGGGATTGCAGAACAAGCAATCTCTTCAATCCGCACGGTCTATTCTTATGTTGGGGAGCGTCAAACACTGAAGAAGTTCAGCATTGCTCTTGAGAAAGTTACACAGCTTGGCATAAAGCAAGGATTCACAAAGGGATTACTAATAGGGAGCATGGGAATGATCTATGCTGCTTGGGCTTTTCAGGCTTGGGTTGGAAGCAAACTTGTTATTGAGAGAGGTGAAAAGGGTGGCCTCGTTTTTGTTTCTGGAATCTGTGTAATTCTGGGAGGATTGGCCATTATGAATGCACTTCCAAATCTCTCCTTCATCACTCAGGCAAGTACTGCTGCTACCCGAATATCTGAGATGATTGATCGCGTTCCGGTTATTGACTCTGAAGATGAAAGGGGAAAAGTTTTACCATATGTGAAAGGAGATATTGAGTTCAGAAAGGTTGACTTCTTCTACCCGTCAAGACCTGATACCCCAATTCTTCAAGGACTCAGCCTTAAGGTTCAAGCTGGGAGAGTGGTTGAGAAGGGATCCCATGACGAGTTGGTCAACATGAGAAATGGAGAAGCTGGAGCTTACAAAAAAATGCTGCAATTACAGAAACAAGCCATGCAAAATAGTAACCCCAACAGAATGGAGCAACCTCAAACTCCACAGACAGCAAGGGGTTTGGGGTCAAGCTGGCAAAACAGCCCACTGACCCCAGCATATGCAGTCACCCCAATATTTTCCATTAGTATAGCGAACTCCATCCAAACTCCCCAGTATGATGACTTTGACGATGAATGGTCAAAAGAAATCTCTAAAACTTCCTCATCTCAGTGGCGTTTGTTTCAAATGAATGCACCAGAGTGGAAGCAAGCAACACTGGGGTGTCTAGGTGCTGCTGGCTTTGGAACTCTTCAGCCAATTCATGCCTACTGCTTAGGAACAGTAGTGTCAATTTACTATGGATCAGACGATTCCACCATCAGATCACAGACCAGATTCTACTGCTACATCTTCTTAGGCTTAGCAGTTTTCAGCTTCTTTGCTAATCTCCTCCAGCATTACAACTTTGCAGTCATGGGAGAGAGATTATCTGAAAGAGTTCGAACAAAATTGCTAGAAAAACTTCTTACCTTTGAGATAGGGTGGTTTGATCAAGATGAGAACACAAGTGCTGCCATATGTGCCCGGCTAACCACTGAAGCCAACATTGTTAGATCCCTTACTGCAGACCGTATCTCATTGTTGGTTCAGGTTTTCTTCAGTGCCACCATAGCTTATATACTCGGATTAATGGTCACATGGAGGATAGCCATTGTCATGATTGCAATACAGCCTTTGCTCATTGGAAGCTTCTATTCTAGGAGTGTTCTAATGAAGAGTATGTCGAGAAAAGCACAGAAATCACAGGCTGTAGGTAGTCAACTTGCAAGTGAAGCTACTTTCAACCACAGGACAATCACTGCATTTTCCTCACAGACAAGGATATTAAACCTCTTTCGAGATGCTATGCAAGGCCCGAGGAACGAGAACATCAAACAGTCATGGGTTGCGGGTTTTGGTCTGTTCAGCTCTCAATTTCTGACCACAGTTGCTATAGCTTTGACATATTGGTATGGAGGGAGGCTTATGAATCAGAACTTAATATCATCAACGCACCTATTTCAAGTTTTCTTCATCCTAATGAGCACTGGTAAGAACATTGCAGATGCAGGAAGCATGACTTCTGATCTTGCAAGAAGTGGGAAAGCCATCACCTCAATATTTGCTATTCTAGACAGAGAAAGTGAGATTTCTTCTGAGGAGCTTAAAGGGGCTAAAAAGACTTTCAAGGGTTACATAGAGCTGAAAAATGTGTCCGAGACCCACCATCGCCCCAAGAACTTGGAGGAGACGCAGCCTCTGCTGCCGCTGGTCCAGCTAGGCGAGATCTCCGCTGAGGAGCTGAAGCAGTACGACGGCTCTGATCCCAACAAGCCTATGCTCATGGCCATCAAGTCTCAGATCTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

1032

Amino Acids

114.42

Weight (kDa)

9.31

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 185 - 443 1.2e-42 ABC transporter transmembrane region
ABC_membrane PF00664 660 - 924 3.7e-44 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 128
AarI CACCTGC 1 cut(s) 227
AasI GACNNNNNNGTC 1 cut(s) 1640
Acc36I ACCTGC 1 cut(s) 227
AccB1I GGYRCC 1 cut(s) 1085
AccI GTMKAC 1 cut(s) 672
AccII CGCG 2 cut(s) 621, 1461
AciI CCGC 5 cut(s) 619, 1135, 2636, 2993, 3018
AclWI GGATC 5 cut(s) 1620, 1633, 2056, 2295, 3044
AcoI YGGCCR 3 cut(s) 264, 1377, 3072
AcsI RAATTY 1 cut(s) 841
AcuI CTGAAG 7 cut(s) 398, 1193, 1500, 1982, 2304, 2329, 3050
AcvI CACGTG 1 cut(s) 190
AfaI GTAC 3 cut(s) 680, 1426, 3038
AfiI CCNNNNNNNGG 3 cut(s) 335, 1039, 1040
AflII CTTAAG 1 cut(s) 1592
AflIII ACRYGT 1 cut(s) 189
AjnI CCWGG 1 cut(s) 930
AleI CACNNNNGTG 2 cut(s) 1945, 1966
Alw21I GWGCWC 4 cut(s) 189, 221, 615, 2774
Alw26I GTCTC 6 cut(s) 105, 112, 757, 2939, 2969, 3087
AlwI GGATC 5 cut(s) 1620, 1633, 2056, 2295, 3044
AlwNI CAGNNNCTG 2 cut(s) 242, 2986
Ama87I CYCGRG 1 cut(s) 2602
AoxI GGCC 7 cut(s) 264, 364, 407, 1333, 1377, 2599, 3072
ApoI RAATTY 1 cut(s) 841
ArsI GACNNNNNNTTYG 2 cut(s) 244, 276
AseI ATTAAT 1 cut(s) 2375
Asp700I GAANNNNTTC 3 cut(s) 1178, 2184, 2208
AspS9I GGNCC 3 cut(s) 747, 2600, 2998
AsuC2I CCSGG 2 cut(s) 1035, 2272
AsuHPI GGTGA 4 cut(s) 929, 1334, 1804, 2830
AsuII TTCGAA 1 cut(s) 2188
AsuNHI GCTAGC 1 cut(s) 286
AvaI CYCGRG 1 cut(s) 2602
AvaII GGWCC 2 cut(s) 747, 2998
AxyI CCTNAGG 1 cut(s) 806
BaeGI GKGCMC 1 cut(s) 2272
BalI TGGCCA 3 cut(s) 266, 1379, 3074
BamHI GGATCC 1 cut(s) 1625
BanI GGYRCC 1 cut(s) 1085
BbrPI CACGTG 1 cut(s) 190
Bbv12I GWGCWC 4 cut(s) 189, 221, 615, 2774
BbvCI CCTCAGC 1 cut(s) 3021
BceAI ACGGC 1 cut(s) 3058
BciT130I CCWGG 1 cut(s) 932
BclI TGATCA 1 cut(s) 2236
BcnI CCSGG 2 cut(s) 1035, 2272
BcoDI GTCTC 6 cut(s) 105, 112, 757, 2939, 2969, 3087
BfaI CTAG 7 cut(s) 287, 305, 1973, 2201, 2445, 2858, 3005
BfmI CTRYAG 3 cut(s) 2310, 2496, 2679
BfrI CTTAAG 1 cut(s) 1592
BfuAI ACCTGC 1 cut(s) 227
BglII AGATCT 2 cut(s) 3012, 3087
BlpI GCTNAGC 2 cut(s) 614, 2107
BmcAI AGTACT 2 cut(s) 680, 1426
Bme1390I CCNGG 3 cut(s) 932, 1035, 2272
Bme18I GGWCC 2 cut(s) 747, 2998
BmeT110I CYCGRG 1 cut(s) 2602
BmgT120I GGNCC 3 cut(s) 747, 2600, 2998
BmiI GGNNCC 2 cut(s) 1087, 1627
BmrFI CCNGG 3 cut(s) 932, 1035, 2272
BmrI ACTGGG 2 cut(s) 1852, 1973
BmsI GCATC 3 cut(s) 874, 2578, 2782
BmtI GCTAGC 1 cut(s) 290
BmuI ACTGGG 2 cut(s) 1852, 1973
BpmI CTGGAG 3 cut(s) 1122, 1686, 2123
Bpu10I CCTNAGC 2 cut(s) 2020, 3021
Bpu1102I GCTNAGC 2 cut(s) 614, 2107
Bpu14I TTCGAA 1 cut(s) 2188
BpuEI CTTGAG 2 cut(s) 671, 1214
BpuMI CCSGG 2 cut(s) 1035, 2272
BsaAI YACGTR 1 cut(s) 190
BsaI GGTCTC 1 cut(s) 2939
BsaJI CCNNGG 2 cut(s) 1033, 2603
BsaWI WCCGGW 1 cut(s) 1465
Bsc4I CCNNNNNNNGG 3 cut(s) 335, 1039, 1040
Bse1I ACTGG 5 cut(s) 226, 1002, 1858, 1968, 2779
Bse21I CCTNAGG 1 cut(s) 806
Bse3DI GCAATG 3 cut(s) 231, 1185, 2784
BseBI CCWGG 1 cut(s) 932
BseDI CCNNGG 2 cut(s) 1033, 2603
BseGI GGATG 4 cut(s) 770, 1029, 1845, 2760
BseLI CCNNNNNNNGG 3 cut(s) 335, 1039, 1040
BseMI GCAATG 3 cut(s) 231, 1185, 2784
BseNI ACTGG 5 cut(s) 226, 1002, 1858, 1968, 2779
BseRI GAGGAG 4 cut(s) 2126, 2900, 2987, 3038
BseSI GKGCMC 1 cut(s) 2272
BseYI CCCAGC 3 cut(s) 400, 1604, 1798
Bsh1236I CGCG 2 cut(s) 621, 1461
BshFI GGCC 7 cut(s) 266, 366, 409, 1335, 1379, 2601, 3074
BshNI GGYRCC 1 cut(s) 1085
BsiHKAI GWGCWC 4 cut(s) 189, 221, 615, 2774
BsiHKCI CYCGRG 1 cut(s) 2602
BsiSI CCGG 3 cut(s) 1035, 1466, 2272
BslFI GGGAC 1 cut(s) 489
BslI CCNNNNNNNGG 3 cut(s) 335, 1039, 1040
BsmAI GTCTC 6 cut(s) 105, 112, 757, 2939, 2969, 3087
BsmBI CGTCTC 2 cut(s) 105, 2969
BsmFI GGGAC 1 cut(s) 489
BsmI GAATGC 2 cut(s) 1393, 1942
BsnI GGCC 7 cut(s) 266, 366, 409, 1335, 1379, 2601, 3074
Bso31I GGTCTC 1 cut(s) 2939
BsoBI CYCGRG 1 cut(s) 2602
Bsp119I TTCGAA 1 cut(s) 2188
Bsp1286I GDGCHC 5 cut(s) 189, 221, 615, 2272, 2774
Bsp1720I GCTNAGC 2 cut(s) 614, 2107
BspACI CCGC 5 cut(s) 619, 1135, 2636, 2993, 3018
BspANI GGCC 7 cut(s) 266, 366, 409, 1335, 1379, 2601, 3074
BspFNI CGCG 2 cut(s) 621, 1461
BspHI TCATGA 1 cut(s) 2403
BspLI GGNNCC 2 cut(s) 1087, 1627
BspMAI CTGCAG 1 cut(s) 2314
BspMI ACCTGC 1 cut(s) 227
BspOI GCTAGC 1 cut(s) 290
BspPI GGATC 5 cut(s) 1620, 1633, 2056, 2295, 3044
BspQI GCTCTTC 1 cut(s) 1011
BspT104I TTCGAA 1 cut(s) 2188
BspT107I GGYRCC 1 cut(s) 1085
BspTI CTTAAG 1 cut(s) 1592
BspTNI GGTCTC 1 cut(s) 2939
BsrDI GCAATG 3 cut(s) 231, 1185, 2784
BsrI ACTGG 5 cut(s) 226, 1002, 1858, 1968, 2779
BssECI CCNNGG 2 cut(s) 1033, 2603
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 7 cut(s) 480, 833, 1141, 2029, 2318, 2625, 2674
Bst6I CTCTTC 5 cut(s) 883, 1011, 1132, 2001, 2456
BstAFI CTTAAG 1 cut(s) 1592
BstAPI GCANNNNNTGC 3 cut(s) 1001, 1427, 2986
BstBAI YACGTR 1 cut(s) 190
BstBI TTCGAA 1 cut(s) 2188
BstC8I GCNNGC 4 cut(s) 288, 1778, 1956, 1984
BstENI CCTNNNNNAGG 1 cut(s) 333
BstF5I GGATG 4 cut(s) 770, 1029, 1845, 2760
BstFNI CGCG 2 cut(s) 621, 1461
BstMAI GTCTC 6 cut(s) 105, 112, 757, 2939, 2969, 3087
BstNI CCWGG 1 cut(s) 932
BstSCI CCNGG 3 cut(s) 930, 1033, 2270
BstSFI CTRYAG 3 cut(s) 2310, 2496, 2679
BstSLI GKGCMC 1 cut(s) 2272
BstUI CGCG 2 cut(s) 621, 1461
BstX2I RGATCY 4 cut(s) 1625, 2300, 3012, 3087
BstXI CCANNNNNNTGG 4 cut(s) 141, 262, 1729, 2968
BstYI RGATCY 4 cut(s) 1625, 2300, 3012, 3087
Bsu36I CCTNAGG 1 cut(s) 806
BsuRI GGCC 7 cut(s) 266, 366, 409, 1335, 1379, 2601, 3074
BtgZI GCGATG 1 cut(s) 2939
BtsCI GGATG 4 cut(s) 770, 1029, 1845, 2760
BtsI GCAGTG 2 cut(s) 297, 2544
BveI ACCTGC 1 cut(s) 227
Cac8I GCNNGC 4 cut(s) 288, 1778, 1956, 1984
CaiI CAGNNNCTG 2 cut(s) 242, 2986
CciI TCATGA 1 cut(s) 2403
Cfr13I GGNCC 3 cut(s) 747, 2600, 2998
CseI GACGC 3 cut(s) 610, 1151, 2986
Csp6I GTAC 3 cut(s) 679, 1425, 3037
CviQI GTAC 3 cut(s) 679, 1425, 3037
DrdI GACNNNNNNGTC 1 cut(s) 1640
DseDI GACNNNNNNGTC 1 cut(s) 1640
EaeI YGGCCR 3 cut(s) 264, 1377, 3072
Eam1104I CTCTTC 5 cut(s) 883, 1011, 1132, 2001, 2456
EarI CTCTTC 5 cut(s) 883, 1011, 1132, 2001, 2456
Eco31I GGTCTC 1 cut(s) 2939
Eco47I GGWCC 2 cut(s) 747, 2998
Eco57I CTGAAG 7 cut(s) 398, 1193, 1500, 1982, 2304, 2329, 3050
Eco72I CACGTG 1 cut(s) 190
Eco81I CCTNAGG 1 cut(s) 806
Eco88I CYCGRG 1 cut(s) 2602
EcoNI CCTNNNNNAGG 1 cut(s) 333
EcoRII CCWGG 1 cut(s) 930
Esp3I CGTCTC 2 cut(s) 105, 2969
FalI AAGNNNNNCTT 4 cut(s) 1526, 1558, 2791, 2823
FaqI GGGAC 1 cut(s) 489
FauI CCCGC 1 cut(s) 2629
FauNDI CATATG 3 cut(s) 1507, 1804, 2264
FbaI TGATCA 1 cut(s) 2236
FblI GTMKAC 1 cut(s) 672
FokI GGATG 4 cut(s) 757, 1016, 1832, 2747
FspBI CTAG 7 cut(s) 287, 305, 1973, 2201, 2445, 2858, 3005
GsaI CCCAGC 3 cut(s) 404, 1608, 1802
GsuI CTGGAG 3 cut(s) 1122, 1686, 2123
HaeIII GGCC 7 cut(s) 266, 366, 409, 1335, 1379, 2601, 3074
HapII CCGG 3 cut(s) 1035, 1466, 2272
HgaI GACGC 3 cut(s) 610, 1151, 2986
HincII GTYRAC 6 cut(s) 50, 538, 673, 1540, 1645, 2507
HindII GTYRAC 6 cut(s) 50, 538, 673, 1540, 1645, 2507
HindIII AAGCTT 1 cut(s) 2434
HpaII CCGG 3 cut(s) 1035, 1466, 2272
HphI GGTGA 4 cut(s) 929, 1334, 1804, 2830
Hpy166II GTNNAC 6 cut(s) 50, 538, 673, 1540, 1645, 2507
Hpy8I GTNNAC 6 cut(s) 50, 538, 673, 1540, 1645, 2507
Hpy99I CGWCG 2 cut(s) 677, 3044
HpyAV CCTTC 6 cut(s) 329, 728, 865, 1045, 1417, 1615
HpyCH4III ACNGT 7 cut(s) 480, 833, 1141, 2029, 2318, 2625, 2674
HpyCH4IV ACGT 2 cut(s) 189, 816
HpySE526I ACGT 2 cut(s) 189, 816
Ksp22I TGATCA 1 cut(s) 2236
LguI GCTCTTC 1 cut(s) 1011
LmnI GCTCC 7 cut(s) 638, 1159, 1251, 1667, 1732, 2887, 3025
LweI GCATC 3 cut(s) 874, 2578, 2782
MaeI CTAG 7 cut(s) 287, 305, 1973, 2201, 2445, 2858, 3005
MaeII ACGT 2 cut(s) 189, 816
MaeIII GTNAC 6 cut(s) 543, 1201, 1715, 1810, 2380, 2918
MfeI CAATTG 1 cut(s) 705
MflI RGATCY 4 cut(s) 1625, 2300, 3012, 3087
MhlI GDGCHC 5 cut(s) 189, 221, 615, 2272, 2774
MlsI TGGCCA 3 cut(s) 266, 1379, 3074
MluNI TGGCCA 3 cut(s) 266, 1379, 3074
MlyI GAGTC 3 cut(s) 114, 1469, 1578
MmeI TCCRAC 4 cut(s) 158, 694, 725, 1276
Mox20I TGGCCA 3 cut(s) 266, 1379, 3074
MroXI GAANNNNTTC 3 cut(s) 1178, 2184, 2208
MscI TGGCCA 3 cut(s) 266, 1379, 3074
MseI TTAA 9 cut(s) 39, 360, 794, 1074, 1593, 2375, 2573, 2726, 2892
MslI CAYNNNNRTG 6 cut(s) 1259, 1915, 1945, 1966, 2402, 2765
Msp20I TGGCCA 3 cut(s) 266, 1379, 3074
MspA1I CMGCKG 2 cut(s) 2995, 3020
MspCI CTTAAG 1 cut(s) 1592
MspI CCGG 3 cut(s) 1035, 1466, 2272
MspR9I CCNGG 3 cut(s) 932, 1035, 2272
MunI CAATTG 1 cut(s) 705
Mva1269I GAATGC 2 cut(s) 1393, 1942
MvaI CCWGG 1 cut(s) 932
MvnI CGCG 2 cut(s) 621, 1461
NciI CCSGG 2 cut(s) 1035, 2272
NdeI CATATG 3 cut(s) 1507, 1804, 2264
NheI GCTAGC 1 cut(s) 286
NlaIV GGNNCC 2 cut(s) 1087, 1627
NmuCI GTSAC 2 cut(s) 1810, 2380
NspV TTCGAA 1 cut(s) 2188
OliI CACNNNNGTG 2 cut(s) 1945, 1966
PagI TCATGA 1 cut(s) 2403
PaqCI CACCTGC 1 cut(s) 227
PciSI GCTCTTC 1 cut(s) 1011
PcsI WCGNNNNNNNCGW 1 cut(s) 669
PctI GAATGC 2 cut(s) 1393, 1942
PdmI GAANNNNTTC 3 cut(s) 1178, 2184, 2208
PfeI GAWTC 8 cut(s) 92, 322, 436, 1227, 1353, 2057, 2082, 2716
PflFI GACNNNGTC 1 cut(s) 668
PleI GAGTC 3 cut(s) 114, 1469, 1578
PmaCI CACGTG 1 cut(s) 190
PmlI CACGTG 1 cut(s) 190
PpsI GAGTC 3 cut(s) 114, 1469, 1578
Ppu21I YACGTR 1 cut(s) 190
PshBI ATTAAT 1 cut(s) 2375
PsiI TTATAA 1 cut(s) 128
Psp6I CCWGG 1 cut(s) 930
PspCI CACGTG 1 cut(s) 190
PspFI CCCAGC 3 cut(s) 400, 1604, 1798
PspGI CCWGG 1 cut(s) 930
PspN4I GGNNCC 2 cut(s) 1087, 1627
PspPI GGNCC 3 cut(s) 747, 2600, 2998
PstI CTGCAG 1 cut(s) 2314
PstNI CAGNNNCTG 2 cut(s) 242, 2986
PsuI RGATCY 4 cut(s) 1625, 2300, 3012, 3087
PsyI GACNNNGTC 1 cut(s) 668
RsaI GTAC 3 cut(s) 680, 1426, 3038
RsaNI GTAC 3 cut(s) 679, 1425, 3037
RseI CAYNNNNRTG 6 cut(s) 1259, 1915, 1945, 1966, 2402, 2765
SalI GTCGAC 1 cut(s) 671
SapI GCTCTTC 1 cut(s) 1011
SaqAI TTAA 9 cut(s) 39, 360, 794, 1074, 1593, 2375, 2573, 2726, 2892
Sau96I GGNCC 3 cut(s) 747, 2600, 2998
ScaI AGTACT 2 cut(s) 680, 1426
SchI GAGTC 3 cut(s) 114, 1469, 1578
ScrFI CCNGG 3 cut(s) 932, 1035, 2272
SduI GDGCHC 5 cut(s) 189, 221, 615, 2272, 2774
SfaNI GCATC 3 cut(s) 874, 2578, 2782
SfcI CTRYAG 3 cut(s) 2310, 2496, 2679
SfuI TTCGAA 1 cut(s) 2188
SinI GGWCC 2 cut(s) 747, 2998
SmiMI CAYNNNNRTG 6 cut(s) 1259, 1915, 1945, 1966, 2402, 2765
SmlI CTYRAG 3 cut(s) 686, 1193, 1592
SmoI CTYRAG 3 cut(s) 686, 1193, 1592
SsiI CCGC 5 cut(s) 619, 1135, 2636, 2993, 3018
SspI AATATT 2 cut(s) 1821, 2847
SspMI CTAG 7 cut(s) 287, 305, 1973, 2201, 2445, 2858, 3005
StyD4I CCNGG 3 cut(s) 930, 1033, 2270
TaaI ACNGT 7 cut(s) 480, 833, 1141, 2029, 2318, 2625, 2674
TaiI ACGT 2 cut(s) 192, 819
TaqI TCGA 4 cut(s) 672, 2188, 2471, 2584
TaqII GACCGA 1 cut(s) 1006
TatI WGTACW 2 cut(s) 678, 1424
TauI GCSGC 2 cut(s) 621, 2995
TfiI GAWTC 8 cut(s) 92, 322, 436, 1227, 1353, 2057, 2082, 2716
Tru1I TTAA 9 cut(s) 39, 360, 794, 1074, 1593, 2375, 2573, 2726, 2892
Tru9I TTAA 9 cut(s) 39, 360, 794, 1074, 1593, 2375, 2573, 2726, 2892
TseFI GTSAC 2 cut(s) 1810, 2380
Tsp45I GTSAC 2 cut(s) 1810, 2380
Tth111I GACNNNGTC 1 cut(s) 668
Vha464I CTTAAG 1 cut(s) 1592
VpaK11BI GGWCC 2 cut(s) 747, 2998
VspI ATTAAT 1 cut(s) 2375
XagI CCTNNNNNAGG 1 cut(s) 333
XapI RAATTY 1 cut(s) 841
XbaI TCTAGA 1 cut(s) 2857
XcmI CCANNNNNNNNNTGG 1 cut(s) 781
XmiI GTMKAC 1 cut(s) 672
XmnI GAANNNNTTC 3 cut(s) 1178, 2184, 2208
XspI CTAG 7 cut(s) 287, 305, 1973, 2201, 2445, 2858, 3005
ZrmI AGTACT 2 cut(s) 680, 1426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.