Rw0G002540

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00076
OG0000317
Physical Location & Seq
Forward (+)
759 .. 3345
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G002540.1

Sequence Viewer

Length: 2334 bp
ATGTATAATATGCTGCAGGTTGGCGAGAGAGGTGTTCAAATGTCGGGAGGGCAGAAGCAAAGAATAGCCATTGCCCGAGCAATCATCAAGAAACCACGCATCCTTCTTCTAGATGAAGCCACGAGCGCATTGGACTCCGAATCGGAGCGTGTAGTTCAAGAAGCTCTTGATAAAGCAGCTGTCGGACGTACGACGATAATCATCGCCCACCGCCTCTCTACCATCCGAAACGCCGACGTCATTGCTGTCGTTCAAAACGGGCAGGTCATGGAGACGGGCTCACACAACGAGCTATTCCAACGTGAAAATGGTCTCTATACCTCGCTTGTCCGCTTACAACAAACAGAGAAGCAAAGAGGACCAGAAGAGCAAGGACATTGCGCATCGTCATCTATATCAAACATGGACATTCACAACACAAGCAGTCGTAGGCTTTCTATGGTCAGCCGCTCCAGTTCTGCTAACTCATTTGCGCAAGGTCGAGCTTCATCAGTGGTTGCTGGGGAAGATGAGATCGTAGAAGGGCAGAAGCTGCCTGTCCCATCTTTTCGGAGATTGATAGCTTTGAACCTTCCGGAGTGGAAACAAGCGCTTTTGGGGTGCTTCAGTGCTGTTCTTTTTGGTGCAGTTCAGCCAGCATATGCATTTGCTATGGGGTCAATGGTGTCGGTTTATTTCTTGACAGATCACGATGAGATCAAGGAGAAGACGAGGATTTATTCACTTTGCTTTCTGGGGTTGGCTATTTTCTCTTTGCTGGTTAACATTTGCCAGCATTACAACTTTGCCTACATGGGAGAGTACTTGACTAAGAGAGTTAGAGAGAGGATGCTTTCCAAGATTCTTACATTCGAAGTTGGGTGGTTTGATCAAGATGAGAATTCCAGTGGTGCCATTTGCTCTAGACTCGCCAAAGATGCCAATGTGGTGAGATCTTTAGTGGGTGATCGGATGGCTCTACTTGTTCAAACTTTCTCAGCTGTGACTGTAGCCTGCACAATGGGTTTGGTCATTGCATGGAGACTTGCCTCAGTTATGATAGCAGTACAACCCATTATCATTGTGAGCTACTACACCAGGCGTGTCCTGCTCAAAAGTATGTCCAGGAAAGCCATCAAAGCTCAAGATGAAAGCAGCAAGCTAGCTGCAGAAGCAGTCTCCAACCTCAGAACCATCACTGCCTTCTCATCTCAGGACCGTCTGTTGAAAATGCTCGAAAAGGCCCAAGAAGGCCCACGTAAGGAAAGCATCCGACAATCGTGGTTTGCGGGGATTGGACTTGGTTGTTCTCAAAGCCTTACGACTATCACCTGGGCTTTTGACTTTTGGTACGGTGGCAAGCTCGTTGCCAAGGGCTACGTCACAGCAAAAGCTCTTTTTGAGACTTTCATGATATTGGTGAGCACGGGCCGGGTTATTGCCGATGCCGGAAGCATGACTTCAGATCTTGCGAAAGGGTCGGATGCTGTTGCGTCCGTATCTGTTGCGTCCGTATTTGCCGTGTTGGACCGGTACACAAAAATAGAACCCGAAGACCCGGAAGGTTGCGAGCCCAAAAGAATAACCGGTCACATAGAATTTCGTAACGTACATTTTGCATACCCCGCTAGGCCTGATGTGATGATTTTCAAAGGATTCTCAATCAAAATCGAAGCTGGAAAATCAACTGCATTGGTGGGACAAAGCGGGTCTGGAAAGTCAACAATCATTGGATTAATCGAAAGATTTTATGATCCATTAAAAGGAGAAGTGATAATTGACGGTCGAGACACGAAATCGTACCACCTCAGGTCATTAAGGAAACATATAGCACTTGTTAGCCAAGAGCCAACGCTATTTTTAGGTACCATAAGAGAGAACATCATATATGGCGTGTCGGATAAGATTGATGAATTGGAGATAATCGAAGCAGCGAAGGCAGCCAACGCTCATGATTTCATTTCAAGCCTTAAGGAGGGATATGACACTTCATGTGGAGACAGAGGAGTGCAACTGTCTGGGGGACAGAAGCAACGCATTGCTATAGCGAGAGCTATATTGAGAAACCCAGTGGTGTTACTATTAGATGAGGCGACCAGTGCGCTTGATAGTCAGTCGGAGAAGGTGGTGCAAGATGCGCTAGAGCGGGTGATGGTGGGGAGGACTAGTGTGGTGGTGGCACACAGGTTGAGTACCATACAACACTGTGATCTTATCACCGTACTTGATAAGGGAAGGGTAGTGGAGAAAGGGACTCACTCATCTCTTTTGGCCAAAGGGCCTAAAGGTTCTTACTACTCATTGGTTAGCTTGCAAAGGACGCCATCTGCATCAGATCTTACTAAATTGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

777

Amino Acids

85.25

Weight (kDa)

9.07

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 7 - 42 1.5e-09 ABC transporter
ABC_membrane PF00664 198 - 467 2.6e-50 ABC transporter transmembrane region
ABC_tran PF00005 544 - 693 1.9e-32 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000317)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28345 AT3G28360 AT3G28380 AT3G28390 AT3G28415 AT3G28415
fragaria_vesca FvH4_1g06060 FvH4_3g21880 FvH4_4g25260 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49750 FvH4_6g49760
malus_domestica MD00G1221200.v1.1 MD02G1065200.v1.1 MD03G1211200.v1.1 MD09G1041500.v1.1 MD09G1041600.v1.1 MD09G1041900.v1.1 MD15G1196000.v1.1 MD16G1105600.v1.1 MD17G1042800.v1.1
prunus_persica Prupe.1G241000_v2.0.a1 Prupe.3G275900_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.3G276100_v2.0.a1 Prupe.4G204300_v2.0.a1 Prupe.7G220300_v2.0.a1
pyrus_communis pycom111g03260 pycom16g08980 pycom17g03840
rosa_chinensis RchiOBHm_Chr2g0091821 RchiOBHm_Chr2g0169781 RchiOBHm_Chr2g0169791 RchiOBHm_Chr2g0169801 RchiOBHm_Chr2g0169841 RchiOBHm_Chr2g0169851 RchiOBHm_Chr2g0169861 RchiOBHm_Chr4g0432501 RchiOBHm_Chr5g0037681 RchiOBHm_Chr5g0037691
rosa_laevigata RLG00000006836 RLG00000016254 RLG00000021903 RLG00000021904 RLG00000021905 RLG00000021906 RLG00000021907 RLG00000021908 RLG00000033801
rosa_multiflora Rmu_sc0001084.1_g000003 Rmu_sc0021402.1_g000003 Rmu_ssc0000389.1_g000016 Rmu_ssc0000389.1_g000019 Rmu_ssc0000389.1_g000024 Rmu_ssc0000389.1_g000027
rosa_roxburghii Rroxscaffold_1G00043250 Rroxscaffold_2G00081770 Rroxscaffold_2G00081780 Rroxscaffold_2G00081790 Rroxscaffold_2G00149710 Rroxscaffold_5G00373960
rosa_rugosa Rorug02G0021300 Rorug02G0543400.1 Rorug02G0543500.1 Rorug02G0543600.1 Rorug02G0543700.1 Rorug02G0543800 Rorug02G0543900 Rorug02G0544000 Rorug04G0259900.1 Rorug05G0166300 Rorug05G0166300
rosa_samantha Rh2AG065900 Rh2AG615300 Rh2AG615400 Rh2AG615500 Rh2AG615600 Rh2AG615700 Rh2AG615800 Rh2AG616000 Rh2AG616200 Rh2BG627600 Rh2BG627700 Rh2BG627800 Rh2BG627900 Rh2BG628000 Rh2BG628100 Rh2CG596900 Rh2CG597000 Rh2CG597100 Rh2CG597200 Rh2DG065000 Rh2DG638400 Rh2DG638600 Rh2DG638700 Rh2DG638800 Rh2DG638900 Rh2DG639000 Rh4AG314700 Rh4BG322400 Rh4CG337600 Rh4DG318300 Rh5AG255800 Rh5BG257900 Rh5CG291300
rosa_wichuraiana Rw0G002540 Rw2G005480 Rw2G051010 Rw2G051020 Rw2G051030 Rw2G051040 Rw4G027360 Rw5G023710 Rw5G024000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 240
Acc16I TGCGCA 2 cut(s) 382, 474
Acc36I ACCTGC 2 cut(s) 7, 253
Acc65I GGTACC 1 cut(s) 1844
AccB1I GGYRCC 2 cut(s) 890, 1844
AccBSI CCGCTC 2 cut(s) 450, 2125
AccIII TCCGGA 1 cut(s) 574
AciI CCGC 7 cut(s) 211, 331, 448, 1268, 1605, 1686, 2125
AclWI GGATC 1 cut(s) 1727
AcoI YGGCCR 1 cut(s) 2250
AcsI RAATTY 2 cut(s) 880, 1577
AcuI CTGAAG 2 cut(s) 589, 1425
AcyI GRCGYC 2 cut(s) 237, 2300
AfeI AGCGCT 1 cut(s) 591
AfiI CCNNNNNNNGG 3 cut(s) 1240, 1742, 1954
AflII CTTAAG 1 cut(s) 1949
AgeI ACCGGT 2 cut(s) 1509, 1565
AgsI TTSAA 8 cut(s) 38, 158, 254, 568, 968, 1207, 1630, 1944
AhlI ACTAGT 1 cut(s) 2144
AjnI CCWGG 3 cut(s) 1076, 1103, 1310
Alw21I GWGCWC 1 cut(s) 1406
Alw26I GTCTC 7 cut(s) 266, 317, 1015, 1162, 1376, 1761, 1971
AlwI GGATC 1 cut(s) 1727
AlwNI CAGNNNCTG 1 cut(s) 532
Ama87I CYCGRG 1 cut(s) 75
Aor13HI TCCGGA 1 cut(s) 574
Aor51HI AGCGCT 1 cut(s) 591
AoxI GGCC 6 cut(s) 1221, 1231, 1408, 1610, 2250, 2258
ApeKI GCWGC 7 cut(s) 13, 176, 532, 1134, 1145, 1910, 1919
ApoI RAATTY 2 cut(s) 880, 1577
AseI ATTAAT 1 cut(s) 1715
AsiGI ACCGGT 2 cut(s) 1509, 1565
Asp718I GGTACC 1 cut(s) 1844
AspLEI GCGC 6 cut(s) 128, 383, 475, 592, 2083, 2119
AspS9I GGNCC 7 cut(s) 359, 1195, 1222, 1232, 1408, 1507, 2258
AsuC2I CCSGG 2 cut(s) 1412, 1538
AsuHPI GGTGA 6 cut(s) 940, 956, 1300, 1411, 2140, 2188
AsuII TTCGAA 1 cut(s) 852
AsuNHI GCTAGC 1 cut(s) 1141
AvaI CYCGRG 1 cut(s) 75
AvaII GGWCC 3 cut(s) 359, 1195, 1507
AxyI CCTNAGG 1 cut(s) 1787
BalI TGGCCA 1 cut(s) 2252
BanI GGYRCC 2 cut(s) 890, 1844
BanII GRGCYC 2 cut(s) 281, 1554
BauI CACGAG 1 cut(s) 121
BbsI GAAGAC 2 cut(s) 713, 1539
Bbv12I GWGCWC 1 cut(s) 1406
BbvI GCAGC 6 cut(s) 188, 519, 1132, 1146, 1922, 1931
BccI CCATC 7 cut(s) 230, 550, 946, 1121, 1181, 2125, 2311
BceAI ACGGC 1 cut(s) 1484
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BciT130I CCWGG 3 cut(s) 1078, 1105, 1312
BclI TGATCA 1 cut(s) 868
BcnI CCSGG 2 cut(s) 1412, 1538
BcoDI GTCTC 7 cut(s) 266, 317, 1015, 1162, 1376, 1761, 1971
BcuI ACTAGT 1 cut(s) 2144
BfaI CTAG 6 cut(s) 110, 903, 1142, 1608, 2120, 2145
BfmI CTRYAG 4 cut(s) 14, 987, 1146, 2022
BfoI RGCGCY 1 cut(s) 593
BfrI CTTAAG 1 cut(s) 1949
BfuAI ACCTGC 2 cut(s) 7, 253
BglII AGATCT 3 cut(s) 932, 1444, 2314
BisI GCNGC 8 cut(s) 14, 177, 448, 533, 1135, 1146, 1911, 1920
BlsI GCNGC 8 cut(s) 15, 178, 449, 534, 1136, 1147, 1912, 1921
BmcAI AGTACT 1 cut(s) 803
Bme1390I CCNGG 5 cut(s) 1078, 1105, 1312, 1412, 1538
Bme18I GGWCC 3 cut(s) 359, 1195, 1507
BmeT110I CYCGRG 1 cut(s) 75
BmgT120I GGNCC 7 cut(s) 359, 1195, 1222, 1232, 1408, 1507, 2258
BmiI GGNNCC 2 cut(s) 892, 1846
BmrFI CCNGG 5 cut(s) 1078, 1105, 1312, 1412, 1538
BmrI ACTGGG 1 cut(s) 2042
BmsI GCATC 9 cut(s) 108, 392, 819, 907, 1257, 1414, 1453, 2104, 2318
BmtI GCTAGC 1 cut(s) 1145
BmuI ACTGGG 1 cut(s) 2042
BpiI GAAGAC 2 cut(s) 713, 1539
BplI GAGNNNNNCTC 2 cut(s) 263, 295
BpmI CTGGAG 1 cut(s) 436
Bpu14I TTCGAA 1 cut(s) 852
BpuEI CTTGAG 1 cut(s) 1107
BpuMI CCSGG 2 cut(s) 1412, 1538
BsaAI YACGTR 1 cut(s) 1238
BsaBI GATNNNNATC 1 cut(s) 200
BsaHI GRCGYC 2 cut(s) 237, 2300
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 2 cut(s) 1311, 1350
BsaWI WCCGGW 3 cut(s) 574, 1509, 1565
BsaXI ACNNNNNCTCC 2 cut(s) 2131, 2161
Bsc4I CCNNNNNNNGG 3 cut(s) 1240, 1742, 1954
Bse118I RCCGGY 2 cut(s) 1509, 1565
Bse1I ACTGG 4 cut(s) 453, 885, 2048, 2076
Bse21I CCTNAGG 1 cut(s) 1787
Bse3DI GCAATG 5 cut(s) 69, 240, 376, 1011, 2016
Bse8I GATNNNNATC 1 cut(s) 200
BseAI TCCGGA 1 cut(s) 574
BseBI CCWGG 3 cut(s) 1078, 1105, 1312
BseDI CCNNGG 2 cut(s) 1311, 1350
BseGI GGATG 6 cut(s) 99, 222, 834, 957, 1248, 1468
BseJI GATNNNNATC 1 cut(s) 200
BseLI CCNNNNNNNGG 3 cut(s) 1240, 1742, 1954
BseMI GCAATG 5 cut(s) 69, 240, 376, 1011, 2016
BseMII CTCAG 5 cut(s) 990, 1044, 1180, 1205, 1801
BseNI ACTGG 4 cut(s) 453, 885, 2048, 2076
BseRI GAGGAG 1 cut(s) 1998
BseXI GCAGC 6 cut(s) 188, 519, 1132, 1146, 1922, 1931
BseYI CCCAGC 1 cut(s) 500
BsgI GTGCAG 2 cut(s) 645, 979
Bsh1285I CGRYCG 1 cut(s) 1765
BshFI GGCC 6 cut(s) 1223, 1233, 1410, 1612, 2252, 2260
BshNI GGYRCC 2 cut(s) 890, 1844
BshTI ACCGGT 2 cut(s) 1509, 1565
BsiEI CGRYCG 1 cut(s) 1765
BsiHKAI GWGCWC 1 cut(s) 1406
BsiHKCI CYCGRG 1 cut(s) 75
BsiSI CCGG 6 cut(s) 575, 1411, 1428, 1510, 1538, 1566
BsiWI CGTACG 1 cut(s) 188
BslFI GGGAC 4 cut(s) 524, 1692, 2016, 2245
BslI CCNNNNNNNGG 3 cut(s) 1240, 1742, 1954
BsmAI GTCTC 7 cut(s) 266, 317, 1015, 1162, 1376, 1761, 1971
BsmBI CGTCTC 1 cut(s) 266
BsmFI GGGAC 4 cut(s) 524, 1692, 2016, 2245
BsnI GGCC 6 cut(s) 1223, 1233, 1410, 1612, 2252, 2260
Bso31I GGTCTC 1 cut(s) 317
BsoBI CYCGRG 1 cut(s) 75
Bsp119I TTCGAA 1 cut(s) 852
Bsp1286I GDGCHC 3 cut(s) 281, 1406, 1554
Bsp13I TCCGGA 1 cut(s) 574
BspACI CCGC 7 cut(s) 211, 331, 448, 1268, 1605, 1686, 2125
BspANI GGCC 6 cut(s) 1223, 1233, 1410, 1612, 2252, 2260
BspCNI CTCAG 5 cut(s) 989, 1043, 1179, 1204, 1800
BspEI TCCGGA 1 cut(s) 574
BspHI TCATGA 2 cut(s) 1389, 1930
BspLI GGNNCC 2 cut(s) 892, 1846
BspMAI CTGCAG 2 cut(s) 18, 1150
BspMI ACCTGC 2 cut(s) 7, 253
BspOI GCTAGC 1 cut(s) 1145
BspPI GGATC 1 cut(s) 1727
BspQI GCTCTTC 1 cut(s) 360
BspT104I TTCGAA 1 cut(s) 852
BspT107I GGYRCC 2 cut(s) 890, 1844
BspTI CTTAAG 1 cut(s) 1949
BspTNI GGTCTC 1 cut(s) 317
BsrBI CCGCTC 2 cut(s) 450, 2125
BsrDI GCAATG 5 cut(s) 69, 240, 376, 1011, 2016
BsrFI RCCGGY 2 cut(s) 1509, 1565
BsrI ACTGG 4 cut(s) 453, 885, 2048, 2076
BssAI RCCGGY 2 cut(s) 1509, 1565
BssECI CCNNGG 2 cut(s) 1311, 1350
BssNI GRCGYC 2 cut(s) 237, 2300
BssSI CACGAG 1 cut(s) 121
BssT1I CCWWGG 1 cut(s) 1350
Bst2BI CACGAG 1 cut(s) 121
Bst2UI CCWGG 3 cut(s) 1078, 1105, 1312
Bst4CI ACNGT 7 cut(s) 988, 1199, 1334, 1763, 1995, 2186, 2200
Bst6I CTCTTC 1 cut(s) 360
BstACI GRCGYC 2 cut(s) 237, 2300
BstAFI CTTAAG 1 cut(s) 1949
BstAPI GCANNNNNTGC 1 cut(s) 532
BstBAI YACGTR 1 cut(s) 1238
BstBI TTCGAA 1 cut(s) 852
BstC8I GCNNGC 8 cut(s) 636, 773, 994, 1139, 1143, 1340, 1550, 2291
BstDEI CTNAG 6 cut(s) 810, 976, 1030, 1166, 1191, 1787
BstENI CCTNNNNNAGG 1 cut(s) 1952
BstF5I GGATG 6 cut(s) 99, 222, 834, 957, 1248, 1468
BstH2I RGCGCY 1 cut(s) 593
BstHHI GCGC 6 cut(s) 128, 383, 475, 592, 2083, 2119
BstMAI GTCTC 7 cut(s) 266, 317, 1015, 1162, 1376, 1761, 1971
BstMCI CGRYCG 1 cut(s) 1765
BstNI CCWGG 3 cut(s) 1078, 1105, 1312
BstSCI CCNGG 5 cut(s) 1076, 1103, 1310, 1410, 1536
BstSFI CTRYAG 4 cut(s) 14, 987, 1146, 2022
BstV1I GCAGC 6 cut(s) 188, 519, 1132, 1146, 1922, 1931
BstV2I GAAGAC 2 cut(s) 713, 1539
BstX2I RGATCY 3 cut(s) 932, 1444, 2314
BstYI RGATCY 3 cut(s) 932, 1444, 2314
Bsu36I CCTNAGG 1 cut(s) 1787
BsuRI GGCC 6 cut(s) 1223, 1233, 1410, 1612, 2252, 2260
BtgZI GCGATG 1 cut(s) 187
BtsCI GGATG 6 cut(s) 99, 222, 834, 957, 1248, 1468
BtsI GCAGTG 1 cut(s) 1176
BtsIMutI CAGTG 7 cut(s) 498, 613, 892, 1176, 2055, 2083, 2182
BveI ACCTGC 2 cut(s) 7, 253
Cac8I GCNNGC 8 cut(s) 636, 773, 994, 1139, 1143, 1340, 1550, 2291
CaiI CAGNNNCTG 1 cut(s) 532
CciI TCATGA 2 cut(s) 1389, 1930
CfoI GCGC 6 cut(s) 128, 383, 475, 592, 2083, 2119
Cfr10I RCCGGY 2 cut(s) 1509, 1565
Cfr13I GGNCC 7 cut(s) 359, 1195, 1222, 1232, 1408, 1507, 2258
CseI GACGC 3 cut(s) 1461, 1476, 2308
CspAI ACCGGT 2 cut(s) 1509, 1565
CviAII CATG 9 cut(s) 268, 403, 793, 1017, 1390, 1435, 1931, 1971, 2331
DdeI CTNAG 6 cut(s) 810, 976, 1030, 1166, 1191, 1787
EaeI YGGCCR 1 cut(s) 2250
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
Eco130I CCWWGG 1 cut(s) 1350
Eco147I AGGCCT 1 cut(s) 1612
Eco24I GRGCYC 2 cut(s) 281, 1554
Eco31I GGTCTC 1 cut(s) 317
Eco47I GGWCC 3 cut(s) 359, 1195, 1507
Eco47III AGCGCT 1 cut(s) 591
Eco57I CTGAAG 2 cut(s) 589, 1425
Eco81I CCTNAGG 1 cut(s) 1787
Eco88I CYCGRG 1 cut(s) 75
EcoNI CCTNNNNNAGG 1 cut(s) 1952
EcoO109I RGGNCCY 1 cut(s) 2258
EcoRI GAATTC 1 cut(s) 880
EcoRII CCWGG 3 cut(s) 1076, 1103, 1310
EcoT14I CCWWGG 1 cut(s) 1350
EcoT22I ATGCAT 1 cut(s) 646
EcoT38I GRGCYC 2 cut(s) 281, 1554
ErhI CCWWGG 1 cut(s) 1350
Esp3I CGTCTC 1 cut(s) 266
FaeI CATG 9 cut(s) 271, 406, 796, 1020, 1393, 1438, 1934, 1974, 2334
FalI AAGNNNNNCTT 4 cut(s) 150, 182, 1423, 1455
FaqI GGGAC 4 cut(s) 524, 1692, 2016, 2245
FatI CATG 9 cut(s) 267, 402, 792, 1016, 1389, 1434, 1930, 1970, 2330
FauI CCCGC 4 cut(s) 1261, 1612, 1679, 2118
FauNDI CATATG 1 cut(s) 640
FbaI TGATCA 1 cut(s) 868
Fnu4HI GCNGC 8 cut(s) 14, 177, 448, 533, 1135, 1146, 1911, 1920
FokI GGATG 6 cut(s) 86, 209, 841, 964, 1235, 1475
FriOI GRGCYC 2 cut(s) 281, 1554
Fsp4HI GCNGC 8 cut(s) 14, 177, 448, 533, 1135, 1146, 1911, 1920
FspBI CTAG 6 cut(s) 110, 903, 1142, 1608, 2120, 2145
FspI TGCGCA 2 cut(s) 382, 474
GlaI GCGC 6 cut(s) 127, 382, 474, 591, 2082, 2118
GluI GCNGC 8 cut(s) 14, 177, 448, 533, 1135, 1146, 1911, 1920
GsaI CCCAGC 1 cut(s) 504
GsuI CTGGAG 1 cut(s) 436
HaeII RGCGCY 1 cut(s) 593
HaeIII GGCC 6 cut(s) 1223, 1233, 1410, 1612, 2252, 2260
HapII CCGG 6 cut(s) 575, 1411, 1428, 1510, 1538, 1566
HgaI GACGC 3 cut(s) 1461, 1476, 2308
HhaI GCGC 6 cut(s) 128, 383, 475, 592, 2083, 2119
Hin1I GRCGYC 2 cut(s) 237, 2300
Hin1II CATG 9 cut(s) 271, 406, 796, 1020, 1393, 1438, 1934, 1974, 2334
Hin6I GCGC 6 cut(s) 126, 381, 473, 590, 2081, 2117
HinP1I GCGC 6 cut(s) 126, 381, 473, 590, 2081, 2117
HincII GTYRAC 2 cut(s) 763, 1701
HindII GTYRAC 2 cut(s) 763, 1701
HinfI GANTC 6 cut(s) 134, 140, 841, 906, 1635, 2233
HpaI GTTAAC 1 cut(s) 763
HpaII CCGG 6 cut(s) 575, 1411, 1428, 1510, 1538, 1566
HphI GGTGA 6 cut(s) 940, 956, 1300, 1411, 2140, 2188
Hpy166II GTNNAC 3 cut(s) 763, 1515, 1701
Hpy8I GTNNAC 3 cut(s) 763, 1515, 1701
Hpy99I CGWCG 2 cut(s) 196, 239
HpyAV CCTTC 9 cut(s) 113, 515, 581, 1192, 1223, 1535, 1909, 2095, 2208
HpyCH4III ACNGT 7 cut(s) 988, 1199, 1334, 1763, 1995, 2186, 2200
HpyCH4IV ACGT 6 cut(s) 187, 237, 301, 1237, 1359, 1587
HpyF3I CTNAG 6 cut(s) 810, 976, 1030, 1166, 1191, 1787
HpySE526I ACGT 6 cut(s) 187, 237, 301, 1237, 1359, 1587
Hsp92I GRCGYC 2 cut(s) 237, 2300
Hsp92II CATG 9 cut(s) 271, 406, 796, 1020, 1393, 1438, 1934, 1974, 2334
HspAI GCGC 6 cut(s) 126, 381, 473, 590, 2081, 2117
Kpn2I TCCGGA 1 cut(s) 574
KpnI GGTACC 1 cut(s) 1848
Ksp22I TGATCA 1 cut(s) 868
KspAI GTTAAC 1 cut(s) 763
LguI GCTCTTC 1 cut(s) 360
LmnI GCTCC 2 cut(s) 145, 455
Lsp1109I GCAGC 6 cut(s) 188, 519, 1132, 1146, 1922, 1931
LweI GCATC 9 cut(s) 108, 392, 819, 907, 1257, 1414, 1453, 2104, 2318
MaeI CTAG 6 cut(s) 110, 903, 1142, 1608, 2120, 2145
MaeII ACGT 6 cut(s) 187, 237, 301, 1237, 1359, 1587
MaeIII GTNAC 5 cut(s) 982, 1360, 1568, 1583, 2055
MbiI CCGCTC 2 cut(s) 450, 2125
MboII GAAGA 5 cut(s) 98, 377, 518, 718, 1544
MflI RGATCY 3 cut(s) 932, 1444, 2314
MhlI GDGCHC 3 cut(s) 281, 1406, 1554
MlsI TGGCCA 1 cut(s) 2252
MluCI AATT 5 cut(s) 880, 1577, 1755, 1892, 2324
MluNI TGGCCA 1 cut(s) 2252
MlyI GAGTC 3 cut(s) 128, 900, 2227
MmeI TCCRAC 8 cut(s) 163, 322, 1185, 1276, 1440, 1485, 1857, 2076
Mox20I TGGCCA 1 cut(s) 2252
Mph1103I ATGCAT 1 cut(s) 646
MroI TCCGGA 1 cut(s) 574
MscI TGGCCA 1 cut(s) 2252
MseI TTAA 5 cut(s) 762, 1715, 1739, 1796, 1950
Msp20I TGGCCA 1 cut(s) 2252
MspA1I CMGCKG 2 cut(s) 179, 980
MspCI CTTAAG 1 cut(s) 1949
MspI CCGG 6 cut(s) 575, 1411, 1428, 1510, 1538, 1566
MspR9I CCNGG 5 cut(s) 1078, 1105, 1312, 1412, 1538
MvaI CCWGG 3 cut(s) 1078, 1105, 1312
NciI CCSGG 2 cut(s) 1412, 1538
NdeI CATATG 1 cut(s) 640
NheI GCTAGC 1 cut(s) 1141
NlaIII CATG 9 cut(s) 271, 406, 796, 1020, 1393, 1438, 1934, 1974, 2334
NlaIV GGNNCC 2 cut(s) 892, 1846
NmuCI GTSAC 3 cut(s) 982, 1360, 1568
NsbI TGCGCA 2 cut(s) 382, 474
NsiI ATGCAT 1 cut(s) 646
NspV TTCGAA 1 cut(s) 852
PagI TCATGA 2 cut(s) 1389, 1930
PceI AGGCCT 1 cut(s) 1612
PciSI GCTCTTC 1 cut(s) 360
PfeI GAWTC 3 cut(s) 140, 841, 1635
Pfl23II CGTACG 1 cut(s) 188
PfoI TCCNGGA 1 cut(s) 1103
PinAI ACCGGT 2 cut(s) 1509, 1565
PkrI GCNGC 8 cut(s) 15, 178, 449, 534, 1136, 1147, 1912, 1921
PleI GAGTC 3 cut(s) 128, 900, 2227
PpsI GAGTC 3 cut(s) 128, 900, 2227
Ppu21I YACGTR 1 cut(s) 1238
PshBI ATTAAT 1 cut(s) 1715
Psp6I CCWGG 3 cut(s) 1076, 1103, 1310
PspFI CCCAGC 1 cut(s) 500
PspGI CCWGG 3 cut(s) 1076, 1103, 1310
PspLI CGTACG 1 cut(s) 188
PspN4I GGNNCC 2 cut(s) 892, 1846
PspPI GGNCC 7 cut(s) 359, 1195, 1222, 1232, 1408, 1507, 2258
PstI CTGCAG 2 cut(s) 18, 1150
PstNI CAGNNNCTG 1 cut(s) 532
PsuI RGATCY 3 cut(s) 932, 1444, 2314
PvuII CAGCTG 2 cut(s) 179, 980
SapI GCTCTTC 1 cut(s) 360
SaqAI TTAA 5 cut(s) 762, 1715, 1739, 1796, 1950
SatI GCNGC 8 cut(s) 14, 177, 448, 533, 1135, 1146, 1911, 1920
Sau96I GGNCC 7 cut(s) 359, 1195, 1222, 1232, 1408, 1507, 2258
ScaI AGTACT 1 cut(s) 803
SchI GAGTC 3 cut(s) 128, 900, 2227
ScrFI CCNGG 5 cut(s) 1078, 1105, 1312, 1412, 1538
SduI GDGCHC 3 cut(s) 281, 1406, 1554
SfaNI GCATC 9 cut(s) 108, 392, 819, 907, 1257, 1414, 1453, 2104, 2318
SfcI CTRYAG 4 cut(s) 14, 987, 1146, 2022
SfuI TTCGAA 1 cut(s) 852
SinI GGWCC 3 cut(s) 359, 1195, 1507
SmlI CTYRAG 2 cut(s) 1122, 1949
SmoI CTYRAG 2 cut(s) 1122, 1949
SpeI ACTAGT 1 cut(s) 2144
Sse9I AATT 5 cut(s) 880, 1577, 1755, 1892, 2324
SseBI AGGCCT 1 cut(s) 1612
SsiI CCGC 7 cut(s) 211, 331, 448, 1268, 1605, 1686, 2125
SspMI CTAG 6 cut(s) 110, 903, 1142, 1608, 2120, 2145
StuI AGGCCT 1 cut(s) 1612
StyD4I CCNGG 5 cut(s) 1076, 1103, 1310, 1410, 1536
StyI CCWWGG 1 cut(s) 1350
TaaI ACNGT 7 cut(s) 988, 1199, 1334, 1763, 1995, 2186, 2200
TaiI ACGT 6 cut(s) 190, 240, 304, 1240, 1362, 1590
TaqI TCGA 7 cut(s) 481, 852, 1215, 1650, 1719, 1765, 1905
TasI AATT 5 cut(s) 880, 1577, 1755, 1892, 2324
TatI WGTACW 2 cut(s) 801, 1045
TauI GCSGC 1 cut(s) 450
TfiI GAWTC 3 cut(s) 140, 841, 1635
Tru1I TTAA 5 cut(s) 762, 1715, 1739, 1796, 1950
Tru9I TTAA 5 cut(s) 762, 1715, 1739, 1796, 1950
TscAI CASTG 7 cut(s) 498, 613, 892, 1183, 2055, 2083, 2189
TseFI GTSAC 3 cut(s) 982, 1360, 1568
TseI GCWGC 7 cut(s) 13, 176, 532, 1134, 1145, 1910, 1919
Tsp45I GTSAC 3 cut(s) 982, 1360, 1568
TspDTI ATGAA 7 cut(s) 129, 477, 1143, 1378, 1905, 1927, 1959
TspGWI ACGGA 2 cut(s) 1465, 1480
TspRI CASTG 7 cut(s) 498, 613, 892, 1183, 2055, 2083, 2189
Vha464I CTTAAG 1 cut(s) 1949
VpaK11BI GGWCC 3 cut(s) 359, 1195, 1507
VspI ATTAAT 1 cut(s) 1715
XagI CCTNNNNNAGG 1 cut(s) 1952
XapI RAATTY 2 cut(s) 880, 1577
XbaI TCTAGA 2 cut(s) 109, 902
XcmI CCANNNNNNNNNTGG 2 cut(s) 127, 305
XspI CTAG 6 cut(s) 110, 903, 1142, 1608, 2120, 2145
ZraI GACGTC 1 cut(s) 238
ZrmI AGTACT 1 cut(s) 803
Zsp2I ATGCAT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.