Belongs to the HisA HisF family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26900 |
| fragaria_vesca | FvH4_5g29730 FvH4_5g29730 FvH4_5g29730 |
| malus_domestica | MD03G1198000.v1.1 MD11G1214000.v1.1 |
| prunus_persica | Prupe.4G217200_v2.0.a1 |
| pyrus_communis | pycom03g14950 |
| rosa_chinensis | RchiOBHm_Chr4g0412471 RchiOBHm_Chr5g0040621 RchiOBHm_Chr5g0040671 |
| rosa_laevigata | RLG00000008296 RLG00000033991 RLG00000033993 |
| rosa_multiflora | Rmu_co8258425.1_g000001 Rmu_sc0000057.1_g000007 Rmu_sc0002604.1_g000021 Rmu_sc0003916.1_g000009 |
| rosa_roxburghii | Rroxscaffold_161G00448020 Rroxscaffold_1G00040000 Rroxscaffold_5G00356630 |
| rosa_rugosa | Rorug04G0104000.1 Rorug05G0186200 Rorug05G0186300 |
| rosa_samantha | Rh1DG043400 Rh4AG173300 Rh4BG172600 Rh4CG184200 Rh4DG168700 Rh5AG272700 Rh5BG277100 Rh5BG277700 Rh5CG309600 Rh5DG285600 |
| rosa_wichuraiana | Rw0G015610 Rw1G002220 Rw5G025570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1200 |
| Acc16I | TGCGCA | 1 cut(s) | 144 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 200 |
| AccI | GTMKAC | 1 cut(s) | 619 |
| AciI | CCGC | 1 cut(s) | 91 |
| AclI | AACGTT | 1 cut(s) | 1329 |
| AclWI | GGATC | 2 cut(s) | 1217, 1627 |
| AcsI | RAATTY | 3 cut(s) | 130, 1075, 1191 |
| AcuI | CTGAAG | 1 cut(s) | 1451 |
| AfaI | GTAC | 4 cut(s) | 330, 982, 1364, 1716 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 77, 200, 1701 |
| AflIII | ACRYGT | 1 cut(s) | 1549 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1278 |
| AjiI | CACGTC | 1 cut(s) | 1550 |
| AjnI | CCWGG | 2 cut(s) | 1110, 1569 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1497, 1529, 1566, 1598 |
| Alw21I | GWGCWC | 2 cut(s) | 767, 1135 |
| Alw26I | GTCTC | 4 cut(s) | 183, 801, 1265, 1540 |
| AlwI | GGATC | 2 cut(s) | 1217, 1627 |
| AoxI | GGCC | 2 cut(s) | 159, 1692 |
| ApeKI | GCWGC | 1 cut(s) | 206 |
| ApoI | RAATTY | 3 cut(s) | 130, 1075, 1191 |
| AseI | ATTAAT | 1 cut(s) | 456 |
| AspLEI | GCGC | 1 cut(s) | 145 |
| AspS9I | GGNCC | 7 cut(s) | 50, 398, 542, 686, 1223, 1280, 1692 |
| AsuC2I | CCSGG | 1 cut(s) | 1731 |
| AsuHPI | GGTGA | 1 cut(s) | 1099 |
| AvaII | GGWCC | 6 cut(s) | 50, 398, 542, 686, 1223, 1280 |
| BanII | GRGCYC | 1 cut(s) | 767 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 675, 707 |
| BbsI | GAAGAC | 1 cut(s) | 1230 |
| Bbv12I | GWGCWC | 2 cut(s) | 767, 1135 |
| BbvI | GCAGC | 1 cut(s) | 193 |
| BccI | CCATC | 6 cut(s) | 2, 559, 703, 956, 1308, 1689 |
| BceAI | ACGGC | 1 cut(s) | 1665 |
| BciT130I | CCWGG | 2 cut(s) | 1112, 1571 |
| BcnI | CCSGG | 1 cut(s) | 1731 |
| BcoDI | GTCTC | 4 cut(s) | 183, 801, 1265, 1540 |
| BfaI | CTAG | 6 cut(s) | 429, 560, 1040, 1400, 1517, 1628 |
| BfmI | CTRYAG | 1 cut(s) | 1493 |
| BisI | GCNGC | 2 cut(s) | 92, 207 |
| BlsI | GCNGC | 2 cut(s) | 93, 208 |
| Bme1390I | CCNGG | 3 cut(s) | 1112, 1571, 1731 |
| Bme18I | GGWCC | 6 cut(s) | 50, 398, 542, 686, 1223, 1280 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1278 |
| BmgBI | CACGTC | 1 cut(s) | 1550 |
| BmgT120I | GGNCC | 7 cut(s) | 50, 398, 542, 686, 1223, 1280, 1692 |
| BmiI | GGNNCC | 1 cut(s) | 1224 |
| BmrFI | CCNGG | 3 cut(s) | 1112, 1571, 1731 |
| BmsI | GCATC | 1 cut(s) | 602 |
| BpiI | GAAGAC | 1 cut(s) | 1230 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 754, 786 |
| BpmI | CTGGAG | 1 cut(s) | 207 |
| BpuEI | CTTGAG | 3 cut(s) | 463, 679, 907 |
| BpuMI | CCSGG | 1 cut(s) | 1731 |
| BsaBI | GATNNNNATC | 1 cut(s) | 237 |
| BsaI | GGTCTC | 2 cut(s) | 183, 1265 |
| BsaJI | CCNNGG | 6 cut(s) | 312, 448, 1110, 1276, 1570, 1729 |
| BsaWI | WCCGGW | 1 cut(s) | 905 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 77, 200, 1701 |
| Bse1I | ACTGG | 2 cut(s) | 190, 1348 |
| Bse3DI | GCAATG | 2 cut(s) | 43, 152 |
| Bse8I | GATNNNNATC | 1 cut(s) | 237 |
| BseBI | CCWGG | 2 cut(s) | 1112, 1571 |
| BseDI | CCNNGG | 6 cut(s) | 312, 448, 1110, 1276, 1570, 1729 |
| BseGI | GGATG | 2 cut(s) | 322, 948 |
| BseJI | GATNNNNATC | 1 cut(s) | 237 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 77, 200, 1701 |
| BseMI | GCAATG | 2 cut(s) | 43, 152 |
| BseMII | CTCAG | 5 cut(s) | 890, 1241, 1373, 1398, 1459 |
| BseNI | ACTGG | 2 cut(s) | 190, 1348 |
| BseRI | GAGGAG | 1 cut(s) | 1366 |
| BseXI | GCAGC | 1 cut(s) | 193 |
| BsgI | GTGCAG | 1 cut(s) | 684 |
| BshFI | GGCC | 2 cut(s) | 161, 1694 |
| BsiHKAI | GWGCWC | 2 cut(s) | 767, 1135 |
| BsiSI | CCGG | 3 cut(s) | 906, 1695, 1731 |
| BslFI | GGGAC | 2 cut(s) | 538, 1717 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 77, 200, 1701 |
| BsmAI | GTCTC | 4 cut(s) | 183, 801, 1265, 1540 |
| BsmBI | CGTCTC | 1 cut(s) | 1540 |
| BsmFI | GGGAC | 2 cut(s) | 538, 1717 |
| BsmI | GAATGC | 1 cut(s) | 1050 |
| BsnI | GGCC | 2 cut(s) | 161, 1694 |
| Bso31I | GGTCTC | 2 cut(s) | 183, 1265 |
| Bsp1286I | GDGCHC | 2 cut(s) | 767, 1135 |
| Bsp143I | GATC | 3 cut(s) | 238, 1209, 1619 |
| BspACI | CCGC | 1 cut(s) | 91 |
| BspANI | GGCC | 2 cut(s) | 161, 1694 |
| BspCNI | CTCAG | 5 cut(s) | 889, 1240, 1372, 1399, 1458 |
| BspLI | GGNNCC | 1 cut(s) | 1224 |
| BspPI | GGATC | 2 cut(s) | 1217, 1627 |
| BspQI | GCTCTTC | 2 cut(s) | 772, 1140 |
| BspTNI | GGTCTC | 2 cut(s) | 183, 1265 |
| BsrDI | GCAATG | 2 cut(s) | 43, 152 |
| BsrI | ACTGG | 2 cut(s) | 190, 1348 |
| BssECI | CCNNGG | 6 cut(s) | 312, 448, 1110, 1276, 1570, 1729 |
| BssMI | GATC | 3 cut(s) | 238, 1209, 1619 |
| BssNAI | GTATAC | 1 cut(s) | 620 |
| BssT1I | CCWWGG | 3 cut(s) | 312, 448, 1276 |
| Bst1107I | GTATAC | 1 cut(s) | 620 |
| Bst2UI | CCWGG | 2 cut(s) | 1112, 1571 |
| Bst4CI | ACNGT | 5 cut(s) | 266, 1118, 1181, 1486, 1497 |
| Bst6I | CTCTTC | 3 cut(s) | 772, 1014, 1140 |
| BstC8I | GCNNGC | 1 cut(s) | 434 |
| BstDEI | CTNAG | 7 cut(s) | 808, 815, 876, 1227, 1359, 1407, 1445 |
| BstF5I | GGATG | 2 cut(s) | 322, 948 |
| BstHHI | GCGC | 1 cut(s) | 145 |
| BstKTI | GATC | 3 cut(s) | 241, 1212, 1622 |
| BstMAI | GTCTC | 4 cut(s) | 183, 801, 1265, 1540 |
| BstMBI | GATC | 3 cut(s) | 238, 1209, 1619 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 42, 97, 1508 |
| BstNI | CCWGG | 2 cut(s) | 1112, 1571 |
| BstNSI | RCATGY | 1 cut(s) | 436 |
| BstSCI | CCNGG | 3 cut(s) | 1110, 1569, 1729 |
| BstSFI | CTRYAG | 1 cut(s) | 1493 |
| BstV1I | GCAGC | 1 cut(s) | 193 |
| BstV2I | GAAGAC | 1 cut(s) | 1230 |
| BstX2I | RGATCY | 1 cut(s) | 1619 |
| BstYI | RGATCY | 1 cut(s) | 1619 |
| BstZ17I | GTATAC | 1 cut(s) | 620 |
| BsuRI | GGCC | 2 cut(s) | 161, 1694 |
| BtrI | CACGTC | 1 cut(s) | 1550 |
| BtsCI | GGATG | 2 cut(s) | 322, 948 |
| BtsI | GCAGTG | 2 cut(s) | 179, 1135 |
| BtsIMutI | CAGTG | 6 cut(s) | 179, 498, 1135, 1186, 1341, 1491 |
| Cac8I | GCNNGC | 1 cut(s) | 434 |
| CfoI | GCGC | 1 cut(s) | 145 |
| Cfr13I | GGNCC | 7 cut(s) | 50, 398, 542, 686, 1223, 1280, 1692 |
| Csp6I | GTAC | 4 cut(s) | 329, 981, 1363, 1715 |
| CviAII | CATG | 3 cut(s) | 195, 433, 1530 |
| CviQI | GTAC | 4 cut(s) | 329, 981, 1363, 1715 |
| DdeI | CTNAG | 7 cut(s) | 808, 815, 876, 1227, 1359, 1407, 1445 |
| DpnI | GATC | 3 cut(s) | 240, 1211, 1621 |
| DpnII | GATC | 3 cut(s) | 238, 1209, 1619 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1278 |
| Eam1104I | CTCTTC | 3 cut(s) | 772, 1014, 1140 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1278 |
| EarI | CTCTTC | 3 cut(s) | 772, 1014, 1140 |
| Ecl136II | GAGCTC | 1 cut(s) | 765 |
| Eco130I | CCWWGG | 3 cut(s) | 312, 448, 1276 |
| Eco24I | GRGCYC | 1 cut(s) | 767 |
| Eco31I | GGTCTC | 2 cut(s) | 183, 1265 |
| Eco47I | GGWCC | 6 cut(s) | 50, 398, 542, 686, 1223, 1280 |
| Eco53kI | GAGCTC | 1 cut(s) | 765 |
| Eco57I | CTGAAG | 1 cut(s) | 1451 |
| EcoICRI | GAGCTC | 1 cut(s) | 765 |
| EcoO109I | RGGNCCY | 4 cut(s) | 50, 398, 686, 1223 |
| EcoRI | GAATTC | 1 cut(s) | 130 |
| EcoRII | CCWGG | 2 cut(s) | 1110, 1569 |
| EcoT14I | CCWWGG | 3 cut(s) | 312, 448, 1276 |
| EcoT38I | GRGCYC | 1 cut(s) | 767 |
| ErhI | CCWWGG | 3 cut(s) | 312, 448, 1276 |
| Esp3I | CGTCTC | 1 cut(s) | 1540 |
| FaeI | CATG | 3 cut(s) | 198, 436, 1533 |
| FaqI | GGGAC | 2 cut(s) | 538, 1717 |
| FatI | CATG | 3 cut(s) | 194, 432, 1529 |
| FblI | GTMKAC | 1 cut(s) | 619 |
| Fnu4HI | GCNGC | 2 cut(s) | 92, 207 |
| FokI | GGATG | 2 cut(s) | 329, 935 |
| FriOI | GRGCYC | 1 cut(s) | 767 |
| Fsp4HI | GCNGC | 2 cut(s) | 92, 207 |
| FspBI | CTAG | 6 cut(s) | 429, 560, 1040, 1400, 1517, 1628 |
| FspI | TGCGCA | 1 cut(s) | 144 |
| GlaI | GCGC | 1 cut(s) | 144 |
| GluI | GCNGC | 2 cut(s) | 92, 207 |
| GsuI | CTGGAG | 1 cut(s) | 207 |
| HaeIII | GGCC | 2 cut(s) | 161, 1694 |
| HapII | CCGG | 3 cut(s) | 906, 1695, 1731 |
| HhaI | GCGC | 1 cut(s) | 145 |
| Hin1II | CATG | 3 cut(s) | 198, 436, 1533 |
| Hin6I | GCGC | 1 cut(s) | 143 |
| HinP1I | GCGC | 1 cut(s) | 143 |
| HindIII | AAGCTT | 2 cut(s) | 123, 647 |
| HinfI | GANTC | 5 cut(s) | 215, 836, 992, 1403, 1520 |
| HpaII | CCGG | 3 cut(s) | 906, 1695, 1731 |
| HphI | GGTGA | 1 cut(s) | 1099 |
| Hpy166II | GTNNAC | 5 cut(s) | 329, 620, 1365, 1489, 1715 |
| Hpy188III | TCNNGA | 4 cut(s) | 335, 1188, 1400, 1417 |
| Hpy8I | GTNNAC | 5 cut(s) | 329, 620, 1365, 1489, 1715 |
| Hpy99I | CGWCG | 1 cut(s) | 233 |
| HpyAV | CCTTC | 7 cut(s) | 259, 677, 855, 1065, 1149, 1166, 1633 |
| HpyCH4III | ACNGT | 5 cut(s) | 266, 1118, 1181, 1486, 1497 |
| HpyCH4IV | ACGT | 2 cut(s) | 1329, 1549 |
| HpyCH4V | TGCA | 6 cut(s) | 100, 115, 436, 701, 1176, 1424 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 42, 97, 1508 |
| HpyF3I | CTNAG | 7 cut(s) | 808, 815, 876, 1227, 1359, 1407, 1445 |
| HpySE526I | ACGT | 2 cut(s) | 1329, 1549 |
| Hsp92II | CATG | 3 cut(s) | 198, 436, 1533 |
| HspAI | GCGC | 1 cut(s) | 143 |
| Kzo9I | GATC | 3 cut(s) | 238, 1209, 1619 |
| LguI | GCTCTTC | 2 cut(s) | 772, 1140 |
| LmnI | GCTCC | 4 cut(s) | 203, 472, 762, 1047 |
| Lsp1109I | GCAGC | 1 cut(s) | 193 |
| LweI | GCATC | 1 cut(s) | 602 |
| MaeI | CTAG | 6 cut(s) | 429, 560, 1040, 1400, 1517, 1628 |
| MaeII | ACGT | 2 cut(s) | 1329, 1549 |
| MaeIII | GTNAC | 4 cut(s) | 260, 277, 1475, 1722 |
| MalI | GATC | 3 cut(s) | 240, 1211, 1621 |
| MboI | GATC | 3 cut(s) | 238, 1209, 1619 |
| MboII | GAAGA | 4 cut(s) | 759, 1001, 1127, 1230 |
| MflI | RGATCY | 1 cut(s) | 1619 |
| MhlI | GDGCHC | 2 cut(s) | 767, 1135 |
| MlyI | GAGTC | 1 cut(s) | 209 |
| MmeI | TCCRAC | 1 cut(s) | 873 |
| MseI | TTAA | 7 cut(s) | 65, 372, 456, 783, 930, 1086, 1557 |
| MspA1I | CMGCKG | 1 cut(s) | 880 |
| MspI | CCGG | 3 cut(s) | 906, 1695, 1731 |
| MspR9I | CCNGG | 3 cut(s) | 1112, 1571, 1731 |
| Mva1269I | GAATGC | 1 cut(s) | 1050 |
| MvaI | CCWGG | 2 cut(s) | 1112, 1571 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 42, 97, 1508 |
| NciI | CCSGG | 1 cut(s) | 1731 |
| NdeII | GATC | 3 cut(s) | 238, 1209, 1619 |
| NlaIII | CATG | 3 cut(s) | 198, 436, 1533 |
| NlaIV | GGNNCC | 1 cut(s) | 1224 |
| NmuCI | GTSAC | 3 cut(s) | 260, 277, 1722 |
| NsbI | TGCGCA | 1 cut(s) | 144 |
| NspI | RCATGY | 1 cut(s) | 436 |
| PaeI | GCATGC | 1 cut(s) | 436 |
| PciSI | GCTCTTC | 2 cut(s) | 772, 1140 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 234 |
| PctI | GAATGC | 1 cut(s) | 1050 |
| PfeI | GAWTC | 4 cut(s) | 836, 992, 1403, 1520 |
| PflFI | GACNNNGTC | 1 cut(s) | 233 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 200 |
| PkrI | GCNGC | 2 cut(s) | 93, 208 |
| PleI | GAGTC | 1 cut(s) | 209 |
| PpsI | GAGTC | 1 cut(s) | 209 |
| PpuMI | RGGWCCY | 4 cut(s) | 50, 398, 686, 1223 |
| PshBI | ATTAAT | 1 cut(s) | 456 |
| PsiI | TTATAA | 1 cut(s) | 1200 |
| Psp124BI | GAGCTC | 1 cut(s) | 767 |
| Psp1406I | AACGTT | 1 cut(s) | 1329 |
| Psp5II | RGGWCCY | 4 cut(s) | 50, 398, 686, 1223 |
| Psp6I | CCWGG | 2 cut(s) | 1110, 1569 |
| PspGI | CCWGG | 2 cut(s) | 1110, 1569 |
| PspN4I | GGNNCC | 1 cut(s) | 1224 |
| PspPI | GGNCC | 7 cut(s) | 50, 398, 542, 686, 1223, 1280, 1692 |
| PspPPI | RGGWCCY | 4 cut(s) | 50, 398, 686, 1223 |
| PsuI | RGATCY | 1 cut(s) | 1619 |
| PsyI | GACNNNGTC | 1 cut(s) | 233 |
| PvuII | CAGCTG | 1 cut(s) | 880 |
| RsaI | GTAC | 4 cut(s) | 330, 982, 1364, 1716 |
| RsaNI | GTAC | 4 cut(s) | 329, 981, 1363, 1715 |
| SacI | GAGCTC | 1 cut(s) | 767 |
| SapI | GCTCTTC | 2 cut(s) | 772, 1140 |
| SaqAI | TTAA | 7 cut(s) | 65, 372, 456, 783, 930, 1086, 1557 |
| SatI | GCNGC | 2 cut(s) | 92, 207 |
| Sau3AI | GATC | 3 cut(s) | 238, 1209, 1619 |
| Sau96I | GGNCC | 7 cut(s) | 50, 398, 542, 686, 1223, 1280, 1692 |
| SchI | GAGTC | 1 cut(s) | 209 |
| ScrFI | CCNGG | 3 cut(s) | 1112, 1571, 1731 |
| SduI | GDGCHC | 2 cut(s) | 767, 1135 |
| SfaNI | GCATC | 1 cut(s) | 602 |
| SfcI | CTRYAG | 1 cut(s) | 1493 |
| SinI | GGWCC | 6 cut(s) | 50, 398, 542, 686, 1223, 1280 |
| SmlI | CTYRAG | 3 cut(s) | 442, 658, 886 |
| SmoI | CTYRAG | 3 cut(s) | 442, 658, 886 |
| SphI | GCATGC | 1 cut(s) | 436 |
| SsiI | CCGC | 1 cut(s) | 91 |
| SspI | AATATT | 1 cut(s) | 1561 |
| SspMI | CTAG | 6 cut(s) | 429, 560, 1040, 1400, 1517, 1628 |
| SstI | GAGCTC | 1 cut(s) | 767 |
| StyD4I | CCNGG | 3 cut(s) | 1110, 1569, 1729 |
| StyI | CCWWGG | 3 cut(s) | 312, 448, 1276 |
| TaaI | ACNGT | 5 cut(s) | 266, 1118, 1181, 1486, 1497 |
| TaiI | ACGT | 2 cut(s) | 1332, 1552 |
| TaqI | TCGA | 2 cut(s) | 228, 237 |
| TatI | WGTACW | 2 cut(s) | 328, 1362 |
| TauI | GCSGC | 1 cut(s) | 94 |
| TfiI | GAWTC | 4 cut(s) | 836, 992, 1403, 1520 |
| Tru1I | TTAA | 7 cut(s) | 65, 372, 456, 783, 930, 1086, 1557 |
| Tru9I | TTAA | 7 cut(s) | 65, 372, 456, 783, 930, 1086, 1557 |
| TscAI | CASTG | 6 cut(s) | 179, 505, 1135, 1186, 1348, 1491 |
| TseFI | GTSAC | 3 cut(s) | 260, 277, 1722 |
| TseI | GCWGC | 1 cut(s) | 206 |
| Tsp45I | GTSAC | 3 cut(s) | 260, 277, 1722 |
| TspDTI | ATGAA | 4 cut(s) | 241, 619, 806, 1428 |
| TspGWI | ACGGA | 1 cut(s) | 1277 |
| TspRI | CASTG | 6 cut(s) | 179, 505, 1135, 1186, 1348, 1491 |
| Tth111I | GACNNNGTC | 1 cut(s) | 233 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 200 |
| VpaK11BI | GGWCC | 6 cut(s) | 50, 398, 542, 686, 1223, 1280 |
| VspI | ATTAAT | 1 cut(s) | 456 |
| XapI | RAATTY | 3 cut(s) | 130, 1075, 1191 |
| XbaI | TCTAGA | 1 cut(s) | 1399 |
| XceI | RCATGY | 1 cut(s) | 436 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 35, 342 |
| XmiI | GTMKAC | 1 cut(s) | 619 |
| XspI | CTAG | 6 cut(s) | 429, 560, 1040, 1400, 1517, 1628 |