Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0004083

Physical Location & Seq

Genomic Coordinates Forward (+)

33265302 .. 33288174

Gene Structure 22873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0289800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2835 bp

ATGGGACTCAAACCAAGCTCTGATCGAGCTCGCAACATATCTCTATCATCCATCCATTCATCCATGTTGAGAATGGTTCTGCAACTTCAATTGCTCCTCTTTCTTTGCTTCATAATTCTTATCAGTACCCCCCTAAATCTTTCATTAGCTTTTGATTTAGAACTAGGTGCTGATGAGTTTAAAAGAGATGACTTCCCTCCCCCACCGGACTTTGTTTTTGGTGCTTCCTCCTCTGCTTATCAGGTGGAAGGTGCTGCGGACCAAGACGGGAGAACCCCAAGCATCTTGGACACCTATACTCATGCTGGGAAAATGCATGGAGCCACTGGAGATGTAGCGTGTGATGAGTATCATAAATACAAGGAAGATGTGCAACTGATGGTGGATACTGGTTTAGAGGCGTATAGATTTTCCATCTCATGGTCAAGACTTATACCCAATGGAAGAGGACCCGTGAATCCAAAGGGTGTACAATATTACAACAATCTCATTGACCAACTAATCAGCAAAGGAATCCAGCCTCATGTTACTTTACACCACAGTGATCTCCCACAGGCACTCGACGATGAGTATGGAGGATGGGTTAGCCCACAGATTGTAAAAGACTTCACTGCATATGCAAATGTTTGCTTCGAACAGTTTGGCGATCGAGTTGGGCATTGGACTACTATGAATGAGCCAAATGTTTTTGTACTCGGGGGTTATGATATTGGATTCCTTCCACCACAACGATGTTCAGCTCCATTTGGTCTTAATTGCTCGAGAGGTAACTCCTCAACTGAGCCATACATGGCAATTCATAATTTCTTGTTATCTCATGCATCAGCAGCAGCACTCTACAAGCATACCTACCAGCACAAGCAGCGTGGGTTTATAGGCATCAATGTATTTGCCTATTGGTTTGTTCCTCAAACCGAAACCCATCAAGACCAAGTTGCTACTCAAAGAGCCCTCGACTTCTATTTTGGTTGGGTTATGCATCCCTTGGTGTATGGAGAGTACCCTCAAGTAATGAAAAAGAATGCAGGCTCTAGAATTCCAACGTTCACCAGTGCTGAGTCTTCAAAGGTCAAGGGTTCCTTCGACTTCATTGGACTTAATTACTATAACACATTGTATGCCAGTGACAACTCTGCCGCATTAAACATTCAAAACAGAGACTATGTAGCGGATTCGGCAACCCAGATTTCTCCTTTGGATTACAATACATCAACGTTGGAGTTTCCGATAACACCTTGGGGTATGGAAGGACTGTTGGAATATATCAAACAACACTACGGCAATCCGCCCTTATATATCCATGAAAATGGCCAACAAACTCGACGCAATTCTTCGTTGGAGGATTGGTCCAGAATCGAATATTTGCATGGACACGTTCACAGTTTGCTTAATGTTATAAGGTGGAAGGTGCTGCGGACCAAGAAGGAAGAACCCCAAGCATCTTGGACACCTATGCGCATGCTGTTGCACGCATATTCCAGACTTGTGGAGATCATTACTAAGTATAAAAATTCAGGGAAAATGCATGGAGCCACCGGAGATGTAGCGTGTGATGAGTATCATAAATACAAGGAAGATGTGCAACTAATGGTGGATACTGGTTTAGAGGCGTATAGATTTTCTATCTCATGGTCAAGACTTATACCCAATGGAAGAGGACCTGTGAATCCAAAGGGTCTACAATATTACAACAATCTAATTGACCAACTAATCAGCAAAGGAATCCAGCCTCATGTTACTTTACACCACAGTGATCTCCCACAGGCACTCGACGATGAGTATGGAGGATGGGTTAGCCCACAGATTGTAAAAGACTTCACTGCATATGCAAATGTTTGCTTCGAACAGTTTGGCGATCGCGTTAGGCATTGGACTACTATGAATGAGCCAAATGTATTTGTACTCGGGGGTTATGATATTGGATTCCTTCCACCGTCACGATGTTCAGCTCCATTTGGTTTTAATTGCTCCAAGGGTAACTCCTCAACTGAGCCCTACATGGCCATTCATAATTTCTTGCTATCTCATGCATCAGCTGCTGCACTCTACAAGCAAACCTACCAGCACAAGCAGCGTGGGTTTATAGGCATCAATGTATTTGCCTATTGGTTTATTCCTCGAACCGAAACCCATCAAGACAAAGTTGCTGCTCAAAGAGCTATGGACTTCTACTTTGGTTGGGTTATGCATCCTTTGGTGTTTGGAGAGTACCCTCAAGTAATGAAAGAGAATGCAGGCTCTAGACTTCCGACGTTCACCAGTGCTGAGTCTTCAAAGGTCAAAGGCTCGTTGGACTTCATCGGACTCAATTACTATAACACATTGTATGCCAAGGACAACTCTGCCGCCCTAAACATTCCAAAAAGAGACTATATGGCTGATTCGGCAATCCAGATTTCTCCTTTGGATCACAATACATCAACGTTTGAGTATCCGATAACACCTTGGGGTATGGAAGAACTGTTGGAATATATCAAACAAAACTACGGCAATCCTCCCTTATATATCCATGAAAATGGTCAACGAACTCGACGCAATTCATCGTTGGAGGATTGGTCCAGAATCGAATATTTGCATGGACACATTCACAGTTTGCTTAATGTTTTAAGGAATGGATCAAATGCCAGAGGCTATTTTACCTGGTCTCTCTTGGATTCACTTGAGCTTTTGGATGGCTATGAATCAAGCTACGGCCTTTACTACATCGATCTGGACGATCCTGATTTAAAAAGACAGCCTAAACTCTCTGCGCATTGGTACTCAAAGTTTCTGAAGAACAAAAACTTCACTCCACGTTCAGTTTCAGATGCTGATCAACGTTACTTCTTTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dabb

Protein Analysis

944

Amino Acids

107.6

Weight (kDa)

6.24

Isoelectric Point (pI)

40.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	68 - 467	1.1e-116	Glycosyl hydrolase family 1
Glyco_hydro_1	PF00232	507 - 928	2.1e-124	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22580
fragaria_vesca	FvH4_3g29640
malus_domestica	MD03G1136000.v1.1 MD11G1158500.v1.1
prunus_persica	Prupe.6G120300_v2.0.a1
pyrus_communis	pycom03g09190
rosa_chinensis	RchiOBHm_Chr5g0055001
rosa_laevigata	RLG00000034955
rosa_multiflora	Rmu_co8073320.1_g000001 Rmu_sc0000502.1_g000018 Rmu_sc0000631.1_g000027 Rmu_sc0000894.1_g000005 Rmu_sc0001023.1_g000031 Rmu_sc0002590.1_g000009 Rmu_sc0002700.1_g000034 Rmu_sc0002831.1_g000015 Rmu_sc0003351.1_g000004 Rmu_sc0004354.1_g000003 Rmu_sc0007341.1_g000039 Rmu_sc0011695.1_g000003 Rmu_sc0018119.1_g000001 Rmu_ssc0000184.1_g000026 Rmu_ssc0000238.1_g000026
rosa_roxburghii	Rroxscaffold_1G00025510 Rroxscaffold_3G00240200 Rroxscaffold_4G00316460 Rroxscaffold_7G00186340
rosa_rugosa	Rorug05G0289800
rosa_samantha	Rh5AG359900 Rh5BG370900 Rh5CG393200 Rh5DG384700
rosa_wichuraiana	Rw5G033860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1397
Acc16I	TGCGCA	2 cut(s)	1457, 2751
AccB7I	CCANNNNNTGG	1 cut(s)	420
AccI	GTMKAC	1 cut(s)	1678
AccII	CGCG	1 cut(s)	1860
AciI	CCGC	6 cut(s)	257, 1137, 1169, 1286, 1414, 2346
AclI	AACGTT	4 cut(s)	1043, 1214, 2423, 2818
AclWI	GGATC	3 cut(s)	2415, 2623, 2711
AcoI	YGGCCR	2 cut(s)	1309, 2001
AcsI	RAATTY	2 cut(s)	1035, 1510
AcuI	CTGAAG	1 cut(s)	2792
AfaI	GTAC	7 cut(s)	127, 471, 693, 1001, 1902, 2210, 2759
AfiI	CCNNNNNNNGG	1 cut(s)	420
AflIII	ACRYGT	1 cut(s)	1372
AgsI	TTSAA	4 cut(s)	89, 1065, 1151, 2274
AjnI	CCWGG	1 cut(s)	2639
AleI	CACNNNNGTG	2 cut(s)	540, 1749
AluBI	AGCT	9 cut(s)	18, 29, 149, 740, 1949, 2036, 2159, 2665, 2688
AluI	AGCT	9 cut(s)	18, 29, 149, 740, 1949, 2036, 2159, 2665, 2688
Alw21I	GWGCWC	1 cut(s)	31
Alw26I	GTCTC	3 cut(s)	1152, 2361, 2649
AlwI	GGATC	3 cut(s)	2415, 2623, 2711
AlwNI	CAGNNNCTG	2 cut(s)	2039, 2810
Ama87I	CYCGRG	3 cut(s)	695, 760, 1904
AoxI	GGCC	3 cut(s)	1309, 2001, 2692
ApeKI	GCWGC	9 cut(s)	254, 827, 830, 862, 1411, 2036, 2039, 2071, 2147
ApoI	RAATTY	2 cut(s)	1035, 1510
ArsI	GACNNNNNNTTYG	6 cut(s)	200, 232, 947, 979, 2156, 2188
AsiSI	GCGATCGC	1 cut(s)	1858
AspLEI	GCGC	2 cut(s)	1458, 2752
AspS9I	GGNCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
AsuHPI	GGTGA	2 cut(s)	1039, 2248
AsuII	TTCGAA	2 cut(s)	633, 1842
AvaI	CYCGRG	3 cut(s)	695, 760, 1904
AvaII	GGWCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
BalI	TGGCCA	2 cut(s)	1311, 2003
BanII	GRGCYC	3 cut(s)	31, 952, 1995
BbsI	GAAGAC	2 cut(s)	1053, 2262
Bbv12I	GWGCWC	1 cut(s)	31
BbvI	GCAGC	9 cut(s)	241, 839, 842, 874, 1398, 2023, 2026, 2083, 2134
BccI	CCATC	8 cut(s)	59, 373, 422, 573, 930, 1782, 2139, 2666
BceAI	ACGGC	3 cut(s)	1294, 2503, 2707
BciT130I	CCWGG	1 cut(s)	2641
BciVI	GTATCC	3 cut(s)	379, 1588, 2442
BclI	TGATCA	1 cut(s)	2812
BcoDI	GTCTC	3 cut(s)	1152, 2361, 2649
BfaI	CTAG	3 cut(s)	164, 1032, 2241
BfuI	GTATCC	3 cut(s)	379, 1588, 2442
Bme1390I	CCNGG	1 cut(s)	2641
Bme18I	GGWCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
BmeT110I	CYCGRG	3 cut(s)	695, 760, 1904
BmgT120I	GGNCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
BmiI	GGNNCC	4 cut(s)	322, 451, 1078, 1531
BmrFI	CCNGG	1 cut(s)	2641
BmsI	GCATC	9 cut(s)	291, 830, 888, 988, 1448, 2039, 2097, 2197, 2797
BpiI	GAAGAC	2 cut(s)	1053, 2262
BpmI	CTGGAG	1 cut(s)	348
Bpu14I	TTCGAA	2 cut(s)	633, 1842
BpuEI	CTTGAG	3 cut(s)	990, 2199, 2681
Bsa29I	ATCGAT	1 cut(s)	2706
BsaBI	GATNNNNATC	3 cut(s)	348, 1557, 2811
BsaI	GGTCTC	1 cut(s)	2649
BsaJI	CCNNGG	5 cut(s)	984, 1235, 1971, 2331, 2444
BsaWI	WCCGGW	2 cut(s)	205, 1535
BsaXI	ACNNNNNCTCC	8 cut(s)	567, 597, 1331, 1361, 1776, 1806, 2540, 2570
Bsc4I	CCNNNNNNNGG	1 cut(s)	420
Bse1I	ACTGG	6 cut(s)	331, 394, 1050, 1122, 1603, 2259
Bse8I	GATNNNNATC	3 cut(s)	348, 1557, 2811
BseBI	CCWGG	1 cut(s)	2641
BseCI	ATCGAT	1 cut(s)	2706
BseDI	CCNNGG	5 cut(s)	984, 1235, 1971, 2331, 2444
BseGI	GGATG	8 cut(s)	47, 51, 59, 584, 979, 1793, 2188, 2677
BseJI	GATNNNNATC	3 cut(s)	348, 1557, 2811
BseLI	CCNNNNNNNGG	1 cut(s)	420
BseMII	CTCAG	4 cut(s)	771, 1047, 1980, 2256
BseNI	ACTGG	6 cut(s)	331, 394, 1050, 1122, 1603, 2259
BseRI	GAGGAG	4 cut(s)	86, 220, 763, 1972
BseXI	GCAGC	9 cut(s)	241, 839, 842, 874, 1398, 2023, 2026, 2083, 2134
BseYI	CCCAGC	1 cut(s)	305
BsgI	GTGCAG	1 cut(s)	2025
Bsh1236I	CGCG	1 cut(s)	1860
Bsh1285I	CGRYCG	2 cut(s)	649, 1858
BshFI	GGCC	3 cut(s)	1311, 2003, 2694
BshVI	ATCGAT	1 cut(s)	2706
BsiEI	CGRYCG	2 cut(s)	649, 1858
BsiHKAI	GWGCWC	1 cut(s)	31
BsiHKCI	CYCGRG	3 cut(s)	695, 760, 1904
BsiSI	CCGG	2 cut(s)	206, 1536
BslFI	GGGAC	1 cut(s)	18
BslI	CCNNNNNNNGG	1 cut(s)	420
BsmAI	GTCTC	3 cut(s)	1152, 2361, 2649
BsmFI	GGGAC	1 cut(s)	18
BsmI	GAATGC	2 cut(s)	1027, 2236
BsnI	GGCC	3 cut(s)	1311, 2003, 2694
Bso31I	GGTCTC	1 cut(s)	2649
BsoBI	CYCGRG	3 cut(s)	695, 760, 1904
Bsp119I	TTCGAA	2 cut(s)	633, 1842
Bsp1286I	GDGCHC	3 cut(s)	31, 952, 1995
Bsp1407I	TGTACA	1 cut(s)	469
BspACI	CCGC	6 cut(s)	257, 1137, 1169, 1286, 1414, 2346
BspANI	GGCC	3 cut(s)	1311, 2003, 2694
BspCNI	CTCAG	4 cut(s)	772, 1048, 1981, 2257
BspDI	ATCGAT	1 cut(s)	2706
BspFNI	CGCG	1 cut(s)	1860
BspLI	GGNNCC	4 cut(s)	322, 451, 1078, 1531
BspPI	GGATC	3 cut(s)	2415, 2623, 2711
BspT104I	TTCGAA	2 cut(s)	633, 1842
BspTNI	GGTCTC	1 cut(s)	2649
BsrGI	TGTACA	1 cut(s)	469
BsrI	ACTGG	6 cut(s)	331, 394, 1050, 1122, 1603, 2259
BssECI	CCNNGG	5 cut(s)	984, 1235, 1971, 2331, 2444
BssT1I	CCWWGG	5 cut(s)	984, 1235, 1971, 2331, 2444
Bst2UI	CCWGG	1 cut(s)	2641
Bst4CI	ACNGT	9 cut(s)	542, 639, 1254, 1382, 1751, 1848, 1935, 2463, 2591
Bst6I	CTCTTC	2 cut(s)	439, 1648
BstAPI	GCANNNNNTGC	1 cut(s)	2036
BstAUI	TGTACA	1 cut(s)	469
BstBI	TTCGAA	2 cut(s)	633, 1842
BstC8I	GCNNGC	5 cut(s)	31, 1027, 1460, 1470, 2236
BstDEI	CTNAG	5 cut(s)	780, 1056, 1500, 1989, 2265
BstF5I	GGATG	8 cut(s)	47, 51, 59, 584, 979, 1793, 2188, 2677
BstFNI	CGCG	1 cut(s)	1860
BstHHI	GCGC	2 cut(s)	1458, 2752
BstMAI	GTCTC	3 cut(s)	1152, 2361, 2649
BstMCI	CGRYCG	2 cut(s)	649, 1858
BstMWI	GCNNNNNNNGC	7 cut(s)	827, 862, 1175, 2036, 2071, 2156, 2384
BstNI	CCWGG	1 cut(s)	2641
BstNSI	RCATGY	1 cut(s)	1462
BstSCI	CCNGG	1 cut(s)	2639
BstUI	CGCG	1 cut(s)	1860
BstV1I	GCAGC	9 cut(s)	241, 839, 842, 874, 1398, 2023, 2026, 2083, 2134
BstV2I	GAAGAC	2 cut(s)	1053, 2262
BstXI	CCANNNNNNTGG	3 cut(s)	1307, 1486, 2516
Bsu15I	ATCGAT	1 cut(s)	2706
BsuI	GTATCC	3 cut(s)	379, 1588, 2442
BsuRI	GGCC	3 cut(s)	1311, 2003, 2694
BsuTUI	ATCGAT	1 cut(s)	2706
BtsCI	GGATG	8 cut(s)	47, 51, 59, 584, 979, 1793, 2188, 2677
BtsI	GCAGTG	2 cut(s)	609, 1818
BtsIMutI	CAGTG	8 cut(s)	324, 547, 609, 1057, 1129, 1756, 1818, 2266
Cac8I	GCNNGC	5 cut(s)	31, 1027, 1460, 1470, 2236
CaiI	CAGNNNCTG	2 cut(s)	2039, 2810
CfoI	GCGC	2 cut(s)	1458, 2752
Cfr13I	GGNCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
ClaI	ATCGAT	1 cut(s)	2706
CseI	GACGC	2 cut(s)	1332, 2541
CsiI	ACCWGGT	1 cut(s)	2639
Csp6I	GTAC	7 cut(s)	126, 470, 692, 1000, 1901, 2209, 2758
CspCI	CAANNNNNGTGG	4 cut(s)	847, 882, 2056, 2091
CviQI	GTAC	7 cut(s)	126, 470, 692, 1000, 1901, 2209, 2758
DdeI	CTNAG	5 cut(s)	780, 1056, 1500, 1989, 2265
DraI	TTTAAA	2 cut(s)	181, 2727
EaeI	YGGCCR	2 cut(s)	1309, 2001
Eam1104I	CTCTTC	2 cut(s)	439, 1648
EarI	CTCTTC	2 cut(s)	439, 1648
EciI	GGCGGA	1 cut(s)	1275
Ecl136II	GAGCTC	1 cut(s)	29
Eco130I	CCWWGG	5 cut(s)	984, 1235, 1971, 2331, 2444
Eco24I	GRGCYC	3 cut(s)	31, 952, 1995
Eco31I	GGTCTC	1 cut(s)	2649
Eco47I	GGWCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
Eco53kI	GAGCTC	1 cut(s)	29
Eco57I	CTGAAG	1 cut(s)	2792
Eco88I	CYCGRG	3 cut(s)	695, 760, 1904
EcoICRI	GAGCTC	1 cut(s)	29
EcoO109I	RGGNCCY	2 cut(s)	449, 1658
EcoRI	GAATTC	1 cut(s)	1035
EcoRII	CCWGG	1 cut(s)	2639
EcoT14I	CCWWGG	5 cut(s)	984, 1235, 1971, 2331, 2444
EcoT22I	ATGCAT	6 cut(s)	318, 823, 981, 1527, 2032, 2190
EcoT38I	GRGCYC	3 cut(s)	31, 952, 1995
ErhI	CCWWGG	5 cut(s)	984, 1235, 1971, 2331, 2444
FalI	AAGNNNNNCTT	2 cut(s)	1064, 1096
FaqI	GGGAC	1 cut(s)	18
FauNDI	CATATG	2 cut(s)	616, 1825
FbaI	TGATCA	1 cut(s)	2812
FblI	GTMKAC	1 cut(s)	1678
FokI	GGATG	8 cut(s)	34, 38, 46, 591, 966, 1800, 2175, 2684
FriOI	GRGCYC	3 cut(s)	31, 952, 1995
FspAI	RTGCGCAY	1 cut(s)	1457
FspBI	CTAG	3 cut(s)	164, 1032, 2241
FspI	TGCGCA	2 cut(s)	1457, 2751
GlaI	GCGC	2 cut(s)	1457, 2751
GsaI	CCCAGC	1 cut(s)	309
GsuI	CTGGAG	1 cut(s)	348
HaeIII	GGCC	3 cut(s)	1311, 2003, 2694
HapII	CCGG	2 cut(s)	206, 1536
HgaI	GACGC	2 cut(s)	1332, 2541
HhaI	GCGC	2 cut(s)	1458, 2752
Hin6I	GCGC	2 cut(s)	1456, 2750
HinP1I	GCGC	2 cut(s)	1456, 2750
HincII	GTYRAC	1 cut(s)	2522
HindII	GTYRAC	1 cut(s)	2522
HpaII	CCGG	2 cut(s)	206, 1536
HphI	GGTGA	2 cut(s)	1039, 2248
Hpy166II	GTNNAC	6 cut(s)	470, 1047, 1378, 1679, 2256, 2522
Hpy188I	TCNGA	7 cut(s)	22, 1227, 2250, 2303, 2436, 2772, 2806
Hpy8I	GTNNAC	6 cut(s)	470, 1047, 1378, 1679, 2256, 2522
Hpy99I	CGWCG	5 cut(s)	566, 1326, 1775, 2254, 2535
HpyAV	CCTTC	7 cut(s)	242, 728, 1090, 1241, 1399, 1417, 1937
HpyCH4III	ACNGT	9 cut(s)	542, 639, 1254, 1382, 1751, 1848, 1935, 2463, 2591
HpyCH4IV	ACGT	7 cut(s)	1043, 1214, 1374, 2252, 2423, 2794, 2818
HpyF10VI	GCNNNNNNNGC	7 cut(s)	827, 862, 1175, 2036, 2071, 2156, 2384
HpyF3I	CTNAG	5 cut(s)	780, 1056, 1500, 1989, 2265
HpySE526I	ACGT	7 cut(s)	1043, 1214, 1374, 2252, 2423, 2794, 2818
HspAI	GCGC	2 cut(s)	1456, 2750
Ksp22I	TGATCA	1 cut(s)	2812
LmnI	GCTCC	6 cut(s)	99, 320, 745, 1529, 1954, 1973
Lsp1109I	GCAGC	9 cut(s)	241, 839, 842, 874, 1398, 2023, 2026, 2083, 2134
LweI	GCATC	9 cut(s)	291, 830, 888, 988, 1448, 2039, 2097, 2197, 2797
MabI	ACCWGGT	1 cut(s)	2639
MaeI	CTAG	3 cut(s)	164, 1032, 2241
MaeII	ACGT	7 cut(s)	1043, 1214, 1374, 2252, 2423, 2794, 2818
MaeIII	GTNAC	7 cut(s)	526, 767, 1124, 1735, 1935, 1976, 2819
MfeI	CAATTG	1 cut(s)	89
MhlI	GDGCHC	3 cut(s)	31, 952, 1995
MlsI	TGGCCA	2 cut(s)	1311, 2003
MluNI	TGGCCA	2 cut(s)	1311, 2003
MlyI	GAGTC	3 cut(s)	1067, 2276, 2298
MmeI	TCCRAC	8 cut(s)	1064, 1197, 1236, 1317, 2271, 2273, 2445, 2526
Mox20I	TGGCCA	2 cut(s)	1311, 2003
Mph1103I	ATGCAT	6 cut(s)	318, 823, 981, 1527, 2032, 2190
MscI	TGGCCA	2 cut(s)	1311, 2003
MseI	TTAA	9 cut(s)	180, 753, 1098, 1142, 1389, 1962, 2598, 2606, 2726
MslI	CAYNNNNRTG	5 cut(s)	540, 730, 1305, 1749, 2514
Msp20I	TGGCCA	2 cut(s)	1311, 2003
MspA1I	CMGCKG	1 cut(s)	2036
MspI	CCGG	2 cut(s)	206, 1536
MspR9I	CCNGG	1 cut(s)	2641
MunI	CAATTG	1 cut(s)	89
Mva1269I	GAATGC	2 cut(s)	1027, 2236
MvaI	CCWGG	1 cut(s)	2641
MvnI	CGCG	1 cut(s)	1860
MwoI	GCNNNNNNNGC	7 cut(s)	827, 862, 1175, 2036, 2071, 2156, 2384
NdeI	CATATG	2 cut(s)	616, 1825
NlaIV	GGNNCC	4 cut(s)	322, 451, 1078, 1531
NmuCI	GTSAC	2 cut(s)	1124, 1935
NsbI	TGCGCA	2 cut(s)	1457, 2751
NsiI	ATGCAT	6 cut(s)	318, 823, 981, 1527, 2032, 2190
NspI	RCATGY	1 cut(s)	1462
NspV	TTCGAA	2 cut(s)	633, 1842
OliI	CACNNNNGTG	2 cut(s)	540, 1749
PaeI	GCATGC	1 cut(s)	1462
PaeR7I	CTCGAG	1 cut(s)	760
PcsI	WCGNNNNNNNCGW	1 cut(s)	2712
PctI	GAATGC	2 cut(s)	1027, 2236
PflMI	CCANNNNNTGG	1 cut(s)	420
Ple19I	CGATCG	2 cut(s)	649, 1858
PleI	GAGTC	3 cut(s)	1066, 2275, 2298
PpsI	GAGTC	3 cut(s)	1066, 2275, 2298
PpuMI	RGGWCCY	2 cut(s)	449, 1658
PsiI	TTATAA	1 cut(s)	1397
Psp124BI	GAGCTC	1 cut(s)	31
Psp1406I	AACGTT	4 cut(s)	1043, 1214, 2423, 2818
Psp5II	RGGWCCY	2 cut(s)	449, 1658
Psp6I	CCWGG	1 cut(s)	2639
PspFI	CCCAGC	1 cut(s)	305
PspGI	CCWGG	1 cut(s)	2639
PspN4I	GGNNCC	4 cut(s)	322, 451, 1078, 1531
PspPI	GGNCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
PspPPI	RGGWCCY	2 cut(s)	449, 1658
PstNI	CAGNNNCTG	2 cut(s)	2039, 2810
PvuI	CGATCG	2 cut(s)	649, 1858
PvuII	CAGCTG	1 cut(s)	2036
RgaI	GCGATCGC	1 cut(s)	1858
RsaI	GTAC	7 cut(s)	127, 471, 693, 1001, 1902, 2210, 2759
RsaNI	GTAC	7 cut(s)	126, 470, 692, 1000, 1901, 2209, 2758
RseI	CAYNNNNRTG	5 cut(s)	540, 730, 1305, 1749, 2514
SacI	GAGCTC	1 cut(s)	31
SaqAI	TTAA	9 cut(s)	180, 753, 1098, 1142, 1389, 1962, 2598, 2606, 2726
Sau96I	GGNCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
SchI	GAGTC	3 cut(s)	1067, 2276, 2298
ScrFI	CCNGG	1 cut(s)	2641
SduI	GDGCHC	3 cut(s)	31, 952, 1995
SexAI	ACCWGGT	1 cut(s)	2639
SfaAI	GCGATCGC	1 cut(s)	1858
SfaNI	GCATC	9 cut(s)	291, 830, 888, 988, 1448, 2039, 2097, 2197, 2797
Sfr274I	CTCGAG	1 cut(s)	760
SfuI	TTCGAA	2 cut(s)	633, 1842
SgfI	GCGATCGC	1 cut(s)	1858
SinI	GGWCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
SlaI	CTCGAG	1 cut(s)	760
SmiMI	CAYNNNNRTG	5 cut(s)	540, 730, 1305, 1749, 2514
SmlI	CTYRAG	4 cut(s)	760, 1005, 2214, 2660
SmoI	CTYRAG	4 cut(s)	760, 1005, 2214, 2660
SphI	GCATGC	1 cut(s)	1462
SsiI	CCGC	6 cut(s)	257, 1137, 1169, 1286, 1414, 2346
SspI	AATATT	4 cut(s)	476, 1361, 1685, 2570
SspMI	CTAG	3 cut(s)	164, 1032, 2241
SstI	GAGCTC	1 cut(s)	31
StyD4I	CCNGG	1 cut(s)	2639
StyI	CCWWGG	5 cut(s)	984, 1235, 1971, 2331, 2444
TaaI	ACNGT	9 cut(s)	542, 639, 1254, 1382, 1751, 1848, 1935, 2463, 2591
TaiI	ACGT	7 cut(s)	1046, 1217, 1377, 2255, 2426, 2797, 2821
TatI	WGTACW	3 cut(s)	469, 691, 1900
TauI	GCSGC	2 cut(s)	1139, 2348
Tru1I	TTAA	9 cut(s)	180, 753, 1098, 1142, 1389, 1962, 2598, 2606, 2726
Tru9I	TTAA	9 cut(s)	180, 753, 1098, 1142, 1389, 1962, 2598, 2606, 2726
TscAI	CASTG	8 cut(s)	331, 547, 616, 1057, 1129, 1756, 1825, 2266
TseFI	GTSAC	2 cut(s)	1124, 1935
TseI	GCWGC	9 cut(s)	254, 827, 830, 862, 1411, 2036, 2039, 2071, 2147
Tsp45I	GTSAC	2 cut(s)	1124, 1935
TspRI	CASTG	8 cut(s)	331, 547, 616, 1057, 1129, 1756, 1825, 2266
Van91I	CCANNNNNTGG	1 cut(s)	420
VpaK11BI	GGWCC	6 cut(s)	259, 449, 1347, 1416, 1658, 2556
XapI	RAATTY	2 cut(s)	1035, 1510
XbaI	TCTAGA	2 cut(s)	1031, 2240
XceI	RCATGY	1 cut(s)	1462
XcmI	CCANNNNNNNNNTGG	1 cut(s)	70
XhoI	CTCGAG	1 cut(s)	760
XmiI	GTMKAC	1 cut(s)	1678
XspI	CTAG	3 cut(s)	164, 1032, 2241
Zsp2I	ATGCAT	6 cut(s)	318, 823, 981, 1527, 2032, 2190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.