Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002320

Physical Location & Seq

Genomic Coordinates Reverse (-)

34596745 .. 34600328

Gene Structure 3584 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0299200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGGAACCAGATCTCGGCAAGATCTTCATTGGTGGGATTTCTTGGGACACAGATGAGGAACAGCTTAAAGAATATTTTAAGAAATATGGGGAGGTGGTGGAGGCTGTGATCATGAGGGATCGGGCAACCGGTCGTGCTCGTGGCTTTGGTTTTGTTGTCTTTGCTGATCCTGCTGTTGCAGATAGGGTAGTGAAGGACAAGCACATGATTGATAGCCGCACAGTGGAAGCAAAGAAGGCTGTTCCTAAGGAGGATCAGCACATGCTAAACAGAACTGGGGGTGCACATAGTTCTCCTGGTCCCGGACGCACGAGAAAGATCTTTGTTGGGGGTTTAGCATCCACAGTCACTGAGAATGACTTTAAGACATACTTTGATCAGTTTGGTACTGTCACTGATGTCGTAGTAATGTATGATCACAACACCCAAAGGCCTAGAGGCTTTGGCTTTATCACTTATGACTCGGAGGACGCAGTGGACAGAGTTCTGCATAAAACATTCCATGAACTCAATGGTAAGATGGTTGAGGTCAAGAGGGCAGTCCCCAAAGAGCAATCCCCAGGGCCCCTCCGGAGCCCTCAGATAGGATACAACTATAGTCCAGGTAGGGCCAATAACTTACTTAACAGTTATGCTCAGGGTTATAATATGAGCCTAGTTGGGGGCTTTGGTGTCGGTATGGATAACAGGTTCAATCCAATTTCTAGTGGTCGTAGTGGGTTTTCTCCAATTGGCACTAATAGATATGGAATGGGTATGAATTTGGAGCCAGGGTTGAGCTCAAGCTATGGTGGGAATTCCAACTTCGGTAATAGTCTAGGATATGCACTGATGTTGAGCCCCACTTATAATGGCAATTCGAACAGGTACACTAACCCTATTGGATATAATGCCGGTAATGGAAGGACCACCTCTCTAGTAAACTCACCTACTCGGAATGTCTGGGGAAACAGTGGCATCAACAATGCCATTAATCCTGGCAGTACTTCGGCTTACTTGAGCTCTGCAAATGGGGGGTTTGGCATTAGTGGTTCGACTTTGGGCCCCAGTTCTTTTTCAACTCAAGGTAGAGGGAATTTATCTGGCTTTACTAGTCCCAGTAATTATAGGAATGGAGGTAACAGCTATGGGTTTGAAGGAGCAGGTTATGGAAGAATAAATGGCACTGGTGTATCCCCAACATCATCATTTCCTACATCAACTGCTGGTTATGAGGGGTCTTATGGGGACTTCTACCATAGTGGTTCAGTTCATGGTGATTCAACTTGGCGCTCCACCACTCCTGAGCTAGATGGTTCTAGTACATTTAGTTATGGTCTGGGCGATATTGCCCCAGGTGCCACAGCCAGTAATTCTCAGGACTACATTGGAAGCTACAGTGTGACCAGTAGACAACCAAATAGAGGAATCGCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PLATZ

Protein Analysis

472

Amino Acids

50.39

Weight (kDa)

8.73

Isoelectric Point (pI)

29.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_7	PF16367	7 - 65	3.1e-06	RNA recognition motif
RRM_1	PF00076	8 - 75	4.6e-18	RNA recognition motif
RRM_7	PF16367	105 - 177	3.6e-07	RNA recognition motif
RRM_1	PF00076	107 - 164	5e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27930 AT2G27930 AT2G27930 AT2G27930 AT2G27930 AT2G27930
fragaria_vesca	FvH4_3g30410 FvH4_3g30410 FvH4_6g17200 FvH4_6g17200
malus_domestica	MD03G1129200.v1.1 MD11G1151300.v1.1 MD12G1103000.v1.1 MD14G1097400.v1.1
prunus_persica	Prupe.6G114500_v2.0.a1 Prupe.6G114500_v2.0.a1 Prupe.7G123100_v2.0.a1
pyrus_communis	pycom11g12330 pycom12g10120 pycom14g09510
rosa_chinensis	RchiOBHm_Chr3g0471281 RchiOBHm_Chr5g0056371
rosa_laevigata	RLG00000024191
rosa_multiflora	Rmu_co8075908.1_g000001 Rmu_sc0000317.1_g000021 Rmu_sc0009082.1_g000006
rosa_roxburghii	Rroxscaffold_1G00023940 Rroxscaffold_6G00410110
rosa_rugosa	Rorug03G0116700 Rorug03G0116800 Rorug05G0299200 Rorug05G0299200
rosa_samantha	Rh3AG166100 Rh3BG191500 Rh3CG181800 Rh3DG184100 Rh5AG370000 Rh5BG381000 Rh5CG404300 Rh5DG394300
rosa_wichuraiana	Rw3G015640 Rw5G034650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	645, 849
Acc36I	ACCTGC	1 cut(s)	1133
AccB1I	GGYRCC	1 cut(s)	1337
AccI	GTMKAC	1 cut(s)	1390
AccIII	TCCGGA	1 cut(s)	570
AciI	CCGC	1 cut(s)	217
AclWI	GGATC	3 cut(s)	126, 161, 261
AcsI	RAATTY	3 cut(s)	760, 796, 1075
AfaI	GTAC	4 cut(s)	388, 869, 985, 1303
AfiI	CCNNNNNNNGG	6 cut(s)	14, 223, 302, 584, 661, 1403
AgeI	ACCGGT	1 cut(s)	128
AgsI	TTSAA	4 cut(s)	694, 1059, 1136, 1263
AhlI	ACTAGT	1 cut(s)	1091
AjnI	CCWGG	6 cut(s)	295, 559, 601, 769, 976, 1333
AloI	GAACNNNNNNTCC	2 cut(s)	674, 706
AluBI	AGCT	7 cut(s)	64, 780, 786, 1002, 1125, 1288, 1374
AluI	AGCT	7 cut(s)	64, 780, 786, 1002, 1125, 1288, 1374
Alw21I	GWGCWC	4 cut(s)	139, 286, 782, 1004
Alw44I	GTGCAC	1 cut(s)	282
AlwI	GGATC	3 cut(s)	126, 161, 261
AlwNI	CAGNNNCTG	1 cut(s)	350
Aor13HI	TCCGGA	1 cut(s)	570
AoxI	GGCC	4 cut(s)	431, 563, 609, 1042
ApaI	GGGCCC	2 cut(s)	567, 1046
ApaLI	GTGCAC	1 cut(s)	282
ApoI	RAATTY	3 cut(s)	760, 796, 1075
AseI	ATTAAT	1 cut(s)	972
AsiGI	ACCGGT	1 cut(s)	128
AspLEI	GCGC	1 cut(s)	1272
AspS9I	GGNCC	7 cut(s)	299, 563, 564, 609, 906, 1042, 1043
AsuC2I	CCSGG	1 cut(s)	303
AsuHPI	GGTGA	2 cut(s)	918, 1268
AsuII	TTCGAA	1 cut(s)	860
AvaII	GGWCC	2 cut(s)	299, 906
AxyI	CCTNAGG	1 cut(s)	246
BaeGI	GKGCMC	3 cut(s)	286, 567, 1046
BaeI	ACNNNNGTAYC	2 cut(s)	1155, 1188
BanI	GGYRCC	1 cut(s)	1337
BanII	GRGCYC	6 cut(s)	567, 578, 782, 842, 1004, 1046
BauI	CACGAG	2 cut(s)	138, 310
Bbv12I	GWGCWC	4 cut(s)	139, 286, 782, 1004
BccI	CCATC	2 cut(s)	514, 1286
BciT130I	CCWGG	6 cut(s)	297, 561, 603, 771, 978, 1335
BciVI	GTATCC	2 cut(s)	581, 1183
BclI	TGATCA	3 cut(s)	108, 376, 415
BcnI	CCSGG	1 cut(s)	303
BcuI	ACTAGT	1 cut(s)	1091
BfaI	CTAG	8 cut(s)	435, 656, 705, 818, 917, 1092, 1289, 1299
BfmI	CTRYAG	2 cut(s)	595, 1375
BfoI	RGCGCY	1 cut(s)	1273
BfuAI	ACCTGC	1 cut(s)	1133
BfuI	GTATCC	2 cut(s)	581, 1183
BglII	AGATCT	3 cut(s)	10, 21, 318
BisI	GCNGC	1 cut(s)	217
BlsI	GCNGC	1 cut(s)	218
BmcAI	AGTACT	1 cut(s)	985
Bme1390I	CCNGG	7 cut(s)	297, 303, 561, 603, 771, 978, 1335
Bme18I	GGWCC	2 cut(s)	299, 906
BmgT120I	GGNCC	7 cut(s)	299, 563, 564, 609, 906, 1042, 1043
BmiI	GGNNCC	9 cut(s)	6, 301, 565, 566, 575, 768, 1044, 1045, 1339
BmrFI	CCNGG	7 cut(s)	297, 303, 561, 603, 771, 978, 1335
BmrI	ACTGGG	3 cut(s)	285, 1041, 1092
BmsI	GCATC	2 cut(s)	347, 966
BmuI	ACTGGG	3 cut(s)	285, 1041, 1092
Bpu10I	CCTNAGC	2 cut(s)	636, 1284
Bpu14I	TTCGAA	1 cut(s)	860
BpuEI	CTTGAG	3 cut(s)	766, 1018, 1047
BpuMI	CCSGG	1 cut(s)	303
BsaJI	CCNNGG	4 cut(s)	559, 560, 770, 1333
BsaWI	WCCGGW	2 cut(s)	128, 570
BsaXI	ACNNNNNCTCC	2 cut(s)	758, 788
Bsc4I	CCNNNNNNNGG	6 cut(s)	14, 223, 302, 584, 661, 1403
Bse118I	RCCGGY	2 cut(s)	128, 893
Bse1I	ACTGG	6 cut(s)	280, 1047, 1098, 1171, 1347, 1386
Bse21I	CCTNAGG	1 cut(s)	246
BseAI	TCCGGA	1 cut(s)	570
BseBI	CCWGG	6 cut(s)	297, 561, 603, 771, 978, 1335
BseDI	CCNNGG	4 cut(s)	559, 560, 770, 1333
BseGI	GGATG	1 cut(s)	338
BseLI	CCNNNNNNNGG	6 cut(s)	14, 223, 302, 584, 661, 1403
BseMII	CTCAG	5 cut(s)	342, 593, 650, 1275, 1370
BseNI	ACTGG	6 cut(s)	280, 1047, 1098, 1171, 1347, 1386
BseSI	GKGCMC	3 cut(s)	286, 567, 1046
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	4 cut(s)	433, 565, 611, 1044
BshNI	GGYRCC	1 cut(s)	1337
BshTI	ACCGGT	1 cut(s)	128
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	4 cut(s)	139, 286, 782, 1004
BsiSI	CCGG	4 cut(s)	129, 303, 571, 894
BslFI	GGGAC	5 cut(s)	59, 285, 527, 1080, 1241
BslI	CCNNNNNNNGG	6 cut(s)	14, 223, 302, 584, 661, 1403
BsmFI	GGGAC	5 cut(s)	59, 285, 527, 1080, 1241
BsnI	GGCC	4 cut(s)	433, 565, 611, 1044
Bsp119I	TTCGAA	1 cut(s)	860
Bsp120I	GGGCCC	2 cut(s)	563, 1042
Bsp1286I	GDGCHC	8 cut(s)	139, 286, 567, 578, 782, 842, 1004, 1046
Bsp13I	TCCGGA	1 cut(s)	570
Bsp143I	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
BspACI	CCGC	1 cut(s)	217
BspANI	GGCC	4 cut(s)	433, 565, 611, 1044
BspCNI	CTCAG	5 cut(s)	343, 592, 649, 1276, 1369
BspEI	TCCGGA	1 cut(s)	570
BspHI	TCATGA	1 cut(s)	111
BspLI	GGNNCC	9 cut(s)	6, 301, 565, 566, 575, 768, 1044, 1045, 1339
BspMI	ACCTGC	1 cut(s)	1133
BspPI	GGATC	3 cut(s)	126, 161, 261
BspT104I	TTCGAA	1 cut(s)	860
BspT107I	GGYRCC	1 cut(s)	1337
BsrFI	RCCGGY	2 cut(s)	128, 893
BsrI	ACTGG	6 cut(s)	280, 1047, 1098, 1171, 1347, 1386
BssAI	RCCGGY	2 cut(s)	128, 893
BssECI	CCNNGG	4 cut(s)	559, 560, 770, 1333
BssMI	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
BssSI	CACGAG	2 cut(s)	138, 310
Bst2BI	CACGAG	2 cut(s)	138, 310
Bst2UI	CCWGG	6 cut(s)	297, 561, 603, 771, 978, 1335
Bst4CI	ACNGT	6 cut(s)	223, 346, 391, 629, 953, 1379
BstBI	TTCGAA	1 cut(s)	860
BstDEI	CTNAG	7 cut(s)	246, 351, 579, 636, 1284, 1356, 1416
BstENI	CCTNNNNNAGG	1 cut(s)	582
BstF5I	GGATG	1 cut(s)	338
BstH2I	RGCGCY	1 cut(s)	1273
BstHHI	GCGC	1 cut(s)	1272
BstKTI	GATC	9 cut(s)	13, 24, 111, 121, 169, 256, 321, 379, 418
BstMBI	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
BstMCI	CGRYCG	1 cut(s)	133
BstMWI	GCNNNNNNNGC	3 cut(s)	170, 236, 1337
BstNI	CCWGG	6 cut(s)	297, 561, 603, 771, 978, 1335
BstNSI	RCATGY	1 cut(s)	265
BstSCI	CCNGG	7 cut(s)	295, 301, 559, 601, 769, 976, 1333
BstSFI	CTRYAG	2 cut(s)	595, 1375
BstSLI	GKGCMC	3 cut(s)	286, 567, 1046
BstX2I	RGATCY	3 cut(s)	10, 21, 318
BstYI	RGATCY	3 cut(s)	10, 21, 318
Bsu36I	CCTNAGG	1 cut(s)	246
BsuI	GTATCC	2 cut(s)	581, 1183
BsuRI	GGCC	4 cut(s)	433, 565, 611, 1044
BtsCI	GGATG	1 cut(s)	338
BtsI	GCAGTG	1 cut(s)	480
BtsIMutI	CAGTG	8 cut(s)	228, 348, 393, 480, 827, 958, 1164, 1384
BveI	ACCTGC	1 cut(s)	1133
CaiI	CAGNNNCTG	1 cut(s)	350
CciI	TCATGA	1 cut(s)	111
CfoI	GCGC	1 cut(s)	1272
Cfr10I	RCCGGY	2 cut(s)	128, 893
Cfr13I	GGNCC	7 cut(s)	299, 563, 564, 609, 906, 1042, 1043
CseI	GACGC	2 cut(s)	315, 479
Csp6I	GTAC	4 cut(s)	387, 868, 984, 1302
CspAI	ACCGGT	1 cut(s)	128
CviAII	CATG	5 cut(s)	112, 205, 262, 503, 1253
CviQI	GTAC	4 cut(s)	387, 868, 984, 1302
DdeI	CTNAG	7 cut(s)	246, 351, 579, 636, 1284, 1356, 1416
DpnI	GATC	9 cut(s)	12, 23, 110, 120, 168, 255, 320, 378, 417
DpnII	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
Ecl136II	GAGCTC	2 cut(s)	780, 1002
Eco147I	AGGCCT	1 cut(s)	433
Eco24I	GRGCYC	6 cut(s)	567, 578, 782, 842, 1004, 1046
Eco47I	GGWCC	2 cut(s)	299, 906
Eco53kI	GAGCTC	2 cut(s)	780, 1002
Eco81I	CCTNAGG	1 cut(s)	246
EcoICRI	GAGCTC	2 cut(s)	780, 1002
EcoNI	CCTNNNNNAGG	1 cut(s)	582
EcoO109I	RGGNCCY	3 cut(s)	563, 564, 1043
EcoRI	GAATTC	1 cut(s)	796
EcoRII	CCWGG	6 cut(s)	295, 559, 601, 769, 976, 1333
EcoT38I	GRGCYC	6 cut(s)	567, 578, 782, 842, 1004, 1046
FaeI	CATG	5 cut(s)	115, 208, 265, 506, 1256
FalI	AAGNNNNNCTT	2 cut(s)	356, 388
FaqI	GGGAC	5 cut(s)	59, 285, 527, 1080, 1241
FatI	CATG	5 cut(s)	111, 204, 261, 502, 1252
FbaI	TGATCA	3 cut(s)	108, 376, 415
FblI	GTMKAC	1 cut(s)	1390
Fnu4HI	GCNGC	1 cut(s)	217
FokI	GGATG	1 cut(s)	325
FriOI	GRGCYC	6 cut(s)	567, 578, 782, 842, 1004, 1046
Fsp4HI	GCNGC	1 cut(s)	217
FspBI	CTAG	8 cut(s)	435, 656, 705, 818, 917, 1092, 1289, 1299
GlaI	GCGC	1 cut(s)	1271
GluI	GCNGC	1 cut(s)	217
HaeII	RGCGCY	1 cut(s)	1273
HaeIII	GGCC	4 cut(s)	433, 565, 611, 1044
HapII	CCGG	4 cut(s)	129, 303, 571, 894
HgaI	GACGC	2 cut(s)	315, 479
HhaI	GCGC	1 cut(s)	1272
Hin1II	CATG	5 cut(s)	115, 208, 265, 506, 1256
Hin6I	GCGC	1 cut(s)	1270
HinP1I	GCGC	1 cut(s)	1270
HinfI	GANTC	3 cut(s)	461, 1259, 1407
HpaII	CCGG	4 cut(s)	129, 303, 571, 894
HphI	GGTGA	2 cut(s)	918, 1268
Hpy166II	GTNNAC	5 cut(s)	284, 478, 870, 922, 1391
Hpy188I	TCNGA	3 cut(s)	466, 582, 936
Hpy188III	TCNNGA	5 cut(s)	112, 532, 571, 1283, 1358
Hpy8I	GTNNAC	5 cut(s)	284, 478, 870, 922, 1391
HpyAV	CCTTC	4 cut(s)	187, 229, 897, 1130
HpyCH4III	ACNGT	6 cut(s)	223, 346, 391, 629, 953, 1379
HpyCH4V	TGCA	5 cut(s)	179, 284, 490, 827, 1007
HpyF10VI	GCNNNNNNNGC	3 cut(s)	170, 236, 1337
HpyF3I	CTNAG	7 cut(s)	246, 351, 579, 636, 1284, 1356, 1416
Hsp92II	CATG	5 cut(s)	115, 208, 265, 506, 1256
HspAI	GCGC	1 cut(s)	1270
Kpn2I	TCCGGA	1 cut(s)	570
Ksp22I	TGATCA	3 cut(s)	108, 376, 415
Kzo9I	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
LmnI	GCTCC	4 cut(s)	573, 766, 1139, 1277
LweI	GCATC	2 cut(s)	347, 966
MaeI	CTAG	8 cut(s)	435, 656, 705, 818, 917, 1092, 1289, 1299
MaeIII	GTNAC	4 cut(s)	346, 391, 1118, 1381
MalI	GATC	9 cut(s)	12, 23, 110, 120, 168, 255, 320, 378, 417
MboI	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
MboII	GAAGA	2 cut(s)	16, 1164
MfeI	CAATTG	1 cut(s)	729
MflI	RGATCY	3 cut(s)	10, 21, 318
MhlI	GDGCHC	8 cut(s)	139, 286, 567, 578, 782, 842, 1004, 1046
MluCI	AATT	8 cut(s)	699, 729, 760, 796, 856, 1075, 1102, 1351
MlyI	GAGTC	1 cut(s)	455
MmeI	TCCRAC	1 cut(s)	825
MroI	TCCGGA	1 cut(s)	570
MseI	TTAA	5 cut(s)	66, 78, 363, 624, 972
MspI	CCGG	4 cut(s)	129, 303, 571, 894
MspR9I	CCNGG	7 cut(s)	297, 303, 561, 603, 771, 978, 1335
MunI	CAATTG	1 cut(s)	729
MvaI	CCWGG	6 cut(s)	297, 561, 603, 771, 978, 1335
MwoI	GCNNNNNNNGC	3 cut(s)	170, 236, 1337
NciI	CCSGG	1 cut(s)	303
NdeII	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
NlaIII	CATG	5 cut(s)	115, 208, 265, 506, 1256
NlaIV	GGNNCC	9 cut(s)	6, 301, 565, 566, 575, 768, 1044, 1045, 1339
NmuCI	GTSAC	3 cut(s)	346, 391, 1381
NspI	RCATGY	1 cut(s)	265
NspV	TTCGAA	1 cut(s)	860
PagI	TCATGA	1 cut(s)	111
PasI	CCCWGGG	1 cut(s)	560
PceI	AGGCCT	1 cut(s)	433
PfeI	GAWTC	2 cut(s)	1259, 1407
PfoI	TCCNGGA	1 cut(s)	301
PinAI	ACCGGT	1 cut(s)	128
PkrI	GCNGC	1 cut(s)	218
PleI	GAGTC	1 cut(s)	455
PpsI	GAGTC	1 cut(s)	455
PshBI	ATTAAT	1 cut(s)	972
PsiI	TTATAA	2 cut(s)	645, 849
Psp124BI	GAGCTC	2 cut(s)	782, 1004
Psp6I	CCWGG	6 cut(s)	295, 559, 601, 769, 976, 1333
PspGI	CCWGG	6 cut(s)	295, 559, 601, 769, 976, 1333
PspN4I	GGNNCC	9 cut(s)	6, 301, 565, 566, 575, 768, 1044, 1045, 1339
PspOMI	GGGCCC	2 cut(s)	563, 1042
PspPI	GGNCC	7 cut(s)	299, 563, 564, 609, 906, 1042, 1043
PstNI	CAGNNNCTG	1 cut(s)	350
PsuI	RGATCY	3 cut(s)	10, 21, 318
RsaI	GTAC	4 cut(s)	388, 869, 985, 1303
RsaNI	GTAC	4 cut(s)	387, 868, 984, 1302
SacI	GAGCTC	2 cut(s)	782, 1004
SaqAI	TTAA	5 cut(s)	66, 78, 363, 624, 972
SatI	GCNGC	1 cut(s)	217
Sau3AI	GATC	9 cut(s)	10, 21, 108, 118, 166, 253, 318, 376, 415
Sau96I	GGNCC	7 cut(s)	299, 563, 564, 609, 906, 1042, 1043
ScaI	AGTACT	1 cut(s)	985
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	7 cut(s)	297, 303, 561, 603, 771, 978, 1335
SduI	GDGCHC	8 cut(s)	139, 286, 567, 578, 782, 842, 1004, 1046
SfaNI	GCATC	2 cut(s)	347, 966
SfcI	CTRYAG	2 cut(s)	595, 1375
SfuI	TTCGAA	1 cut(s)	860
SinI	GGWCC	2 cut(s)	299, 906
SmlI	CTYRAG	3 cut(s)	781, 997, 1062
SmoI	CTYRAG	3 cut(s)	781, 997, 1062
SpeI	ACTAGT	1 cut(s)	1091
Sse9I	AATT	8 cut(s)	699, 729, 760, 796, 856, 1075, 1102, 1351
SseBI	AGGCCT	1 cut(s)	433
SsiI	CCGC	1 cut(s)	217
SspI	AATATT	1 cut(s)	74
SspMI	CTAG	8 cut(s)	435, 656, 705, 818, 917, 1092, 1289, 1299
SstI	GAGCTC	2 cut(s)	782, 1004
StuI	AGGCCT	1 cut(s)	433
StyD4I	CCNGG	7 cut(s)	295, 301, 559, 601, 769, 976, 1333
TaaI	ACNGT	6 cut(s)	223, 346, 391, 629, 953, 1379
TaqI	TCGA	2 cut(s)	860, 1034
TasI	AATT	8 cut(s)	699, 729, 760, 796, 856, 1075, 1102, 1351
TatI	WGTACW	2 cut(s)	983, 1301
TauI	GCSGC	1 cut(s)	219
TfiI	GAWTC	2 cut(s)	1259, 1407
Tru1I	TTAA	5 cut(s)	66, 78, 363, 624, 972
Tru9I	TTAA	5 cut(s)	66, 78, 363, 624, 972
TscAI	CASTG	8 cut(s)	228, 355, 400, 480, 834, 958, 1171, 1384
TseFI	GTSAC	3 cut(s)	346, 391, 1381
Tsp45I	GTSAC	3 cut(s)	346, 391, 1381
TspDTI	ATGAA	4 cut(s)	16, 519, 773, 1241
TspRI	CASTG	8 cut(s)	228, 355, 400, 480, 834, 958, 1171, 1384
VneI	GTGCAC	1 cut(s)	282
VpaK11BI	GGWCC	2 cut(s)	299, 906
VspI	ATTAAT	1 cut(s)	972
XagI	CCTNNNNNAGG	1 cut(s)	582
XapI	RAATTY	3 cut(s)	760, 796, 1075
XceI	RCATGY	1 cut(s)	265
XcmI	CCANNNNNNNNNTGG	1 cut(s)	509
XmiI	GTMKAC	1 cut(s)	1390
XspI	CTAG	8 cut(s)	435, 656, 705, 818, 917, 1092, 1289, 1299
ZrmI	AGTACT	1 cut(s)	985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.