Rorug05G0327300

MLO-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
39374573 .. 39375784
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0327300.1

Sequence Viewer

Length: 432 bp
ATGTCAATTAAGCCAAAGAAAATTATGAGTAAGTTCCAGTCGATTTACGGGTTTGATATTTCCTACAAAATTGCTTGGAACACAAAGAAAAAGGCTAAGGAAATTATTTATGGTTCCGAGGCGGATTCCTTTAACATGCTATCTTCGCATAGAGAAGCTGTTTTGGAGAGTAATCGGGGCTCTACTTTTGTGTTAGAAGTTGATCCATCTAGTAATAGGTTTGAAAGGCTTTTCTTAGCTTATGGAGGCTATGTTGAAGGTTTTCGATTCTATCTTCCGGTATTTCATGTGGATGGAACTTTTGGGAAGAGCATGTACAAGGGTCTCATTTCTCTCATCATTTATGGTACTGGACTCTTGTGTGCTTGTGATAAGCACTTTGTGGATATTCTTATGAGAAGATATCTGGGTAAAGGTGATTCTAGACATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

16.38

Weight (kDa)

9.42

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 122
AclWI GGATC 1 cut(s) 197
AdeI CACNNNGTG 1 cut(s) 382
AfaI GTAC 2 cut(s) 317, 349
AgsI TTSAA 2 cut(s) 224, 257
AluBI AGCT 2 cut(s) 158, 239
AluI AGCT 2 cut(s) 158, 239
Alw26I GTCTC 1 cut(s) 329
AlwI GGATC 1 cut(s) 197
Asp700I GAANNNNTTC 1 cut(s) 261
AsuHPI GGTGA 1 cut(s) 428
BanII GRGCYC 1 cut(s) 182
BarI GAAGNNNNNNTAC 2 cut(s) 299, 331
BccI CCATC 2 cut(s) 214, 287
BcoDI GTCTC 1 cut(s) 329
BfaI CTAG 2 cut(s) 210, 423
BmiI GGNNCC 1 cut(s) 115
Bpu10I CCTNAGC 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 1 cut(s) 117
BsaWI WCCGGW 1 cut(s) 277
BsaXI ACNNNNNCTCC 2 cut(s) 237, 267
Bse1I ACTGG 2 cut(s) 37, 355
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 298
BseNI ACTGG 2 cut(s) 37, 355
BsiSI CCGG 1 cut(s) 278
BsmAI GTCTC 1 cut(s) 329
Bso31I GGTCTC 1 cut(s) 329
Bsp1286I GDGCHC 1 cut(s) 182
Bsp1407I TGTACA 1 cut(s) 315
Bsp143I GATC 1 cut(s) 202
BspACI CCGC 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 115
BspPI GGATC 1 cut(s) 197
BspQI GCTCTTC 1 cut(s) 302
BspTNI GGTCTC 1 cut(s) 329
BsrGI TGTACA 1 cut(s) 315
BsrI ACTGG 2 cut(s) 37, 355
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 1 cut(s) 202
Bst6I CTCTTC 1 cut(s) 302
BstAUI TGTACA 1 cut(s) 315
BstDEI CTNAG 2 cut(s) 96, 235
BstF5I GGATG 1 cut(s) 298
BstKTI GATC 1 cut(s) 205
BstMAI GTCTC 1 cut(s) 329
BstMBI GATC 1 cut(s) 202
BstMWI GCNNNNNNNGC 1 cut(s) 145
BstNSI RCATGY 2 cut(s) 139, 316
BtsCI GGATG 1 cut(s) 298
Csp6I GTAC 2 cut(s) 316, 348
CviAII CATG 3 cut(s) 136, 287, 313
CviJI RGCY 7 cut(s) 13, 95, 158, 180, 229, 239, 249
CviKI_1 RGCY 7 cut(s) 13, 95, 158, 180, 229, 239, 249
CviQI GTAC 2 cut(s) 316, 348
DdeI CTNAG 2 cut(s) 96, 235
DpnI GATC 1 cut(s) 204
DpnII GATC 1 cut(s) 202
DraIII CACNNNGTG 1 cut(s) 382
Eam1104I CTCTTC 1 cut(s) 302
EarI CTCTTC 1 cut(s) 302
EciI GGCGGA 1 cut(s) 137
Eco24I GRGCYC 1 cut(s) 182
Eco31I GGTCTC 1 cut(s) 329
Eco32I GATATC 1 cut(s) 404
EcoRV GATATC 1 cut(s) 404
EcoT38I GRGCYC 1 cut(s) 182
FaeI CATG 3 cut(s) 139, 290, 316
FatI CATG 3 cut(s) 135, 286, 312
FokI GGATG 1 cut(s) 305
FriOI GRGCYC 1 cut(s) 182
FspBI CTAG 2 cut(s) 210, 423
HapII CCGG 1 cut(s) 278
Hin1II CATG 3 cut(s) 139, 290, 316
HinfI GANTC 4 cut(s) 125, 267, 354, 419
HpaII CCGG 1 cut(s) 278
HphI GGTGA 1 cut(s) 428
Hpy188I TCNGA 1 cut(s) 118
Hpy188III TCNNGA 1 cut(s) 423
HpyAV CCTTC 1 cut(s) 251
HpyF10VI GCNNNNNNNGC 1 cut(s) 145
HpyF3I CTNAG 2 cut(s) 96, 235
Hsp92II CATG 3 cut(s) 139, 290, 316
Kzo9I GATC 1 cut(s) 202
LguI GCTCTTC 1 cut(s) 302
LpnPI CCDG 4 cut(s) 50, 291, 336, 392
MaeI CTAG 2 cut(s) 210, 423
MalI GATC 1 cut(s) 204
MboI GATC 1 cut(s) 202
MboII GAAGA 4 cut(s) 135, 266, 319, 411
MhlI GDGCHC 1 cut(s) 182
MluCI AATT 4 cut(s) 6, 21, 69, 102
MlyI GAGTC 1 cut(s) 348
MnlI CCTC 2 cut(s) 112, 239
MroXI GAANNNNTTC 1 cut(s) 261
MseI TTAA 3 cut(s) 9, 132, 430
MslI CAYNNNNRTG 1 cut(s) 291
MspI CCGG 1 cut(s) 278
MwoI GCNNNNNNNGC 1 cut(s) 145
NdeII GATC 1 cut(s) 202
NlaIII CATG 3 cut(s) 139, 290, 316
NlaIV GGNNCC 1 cut(s) 115
NspI RCATGY 2 cut(s) 139, 316
PciSI GCTCTTC 1 cut(s) 302
PdmI GAANNNNTTC 1 cut(s) 261
PfeI GAWTC 3 cut(s) 125, 267, 419
PleI GAGTC 1 cut(s) 348
PpsI GAGTC 1 cut(s) 348
PspN4I GGNNCC 1 cut(s) 115
RsaI GTAC 2 cut(s) 317, 349
RsaNI GTAC 2 cut(s) 316, 348
RseI CAYNNNNRTG 1 cut(s) 291
SapI GCTCTTC 1 cut(s) 302
SaqAI TTAA 3 cut(s) 9, 132, 430
Sau3AI GATC 1 cut(s) 202
SchI GAGTC 1 cut(s) 348
SduI GDGCHC 1 cut(s) 182
SetI ASST 5 cut(s) 160, 221, 241, 262, 418
SmiMI CAYNNNNRTG 1 cut(s) 291
Sse9I AATT 4 cut(s) 6, 21, 69, 102
SsiI CCGC 1 cut(s) 122
SspMI CTAG 2 cut(s) 210, 423
TaqI TCGA 2 cut(s) 41, 265
TasI AATT 4 cut(s) 6, 21, 69, 102
TatI WGTACW 1 cut(s) 315
TfiI GAWTC 3 cut(s) 125, 267, 419
Tru1I TTAA 3 cut(s) 9, 132, 430
Tru9I TTAA 3 cut(s) 9, 132, 430
TspDTI ATGAA 1 cut(s) 275
XbaI TCTAGA 1 cut(s) 422
XceI RCATGY 2 cut(s) 139, 316
XmnI GAANNNNTTC 1 cut(s) 261
XspI CTAG 2 cut(s) 210, 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.