Rh5BG403800

MLO-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
65464219 .. 65468055
3837 bp
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UTR
Exon/CDS
Intron
Rh5BG403800.1

Sequence Viewer

Length: 834 bp
ATGGCTTCCGAAGGAACAAGTCGCTCCCTGCAAGACACACCCAGTTGGGCTCTGGCAACAGTTTGCTTCGTCTTCATCTTTCTCTCTCTCTTCATAGAGCACTTGATCCATCTCCTTTCCCAATTTCTCAAAAAGCATAGAAAGACTGCATTGTTCGAGGCCGTAGAGAAGCTCAAATCAGTGCTTATTTTTCTGGGTTTCATGTCCCTAATACTGACAGTAACACAGAGATGGATAGCCAATATTTGCATACCCACAGAAGTTGCATATACTATGCTTCCTTGCAGAAAATCAGTATCAACTAAAACAACCAAAGCAGTTGGTTTCGATCGCATGTGGAGCACCGGGGCATCTACAACTTTTGAAGTAATACAAAGAAGACTAGCAGAAACAGAAGATAGTACTACTAGTTCCACTTCTACCACTTCTGAGGATCACTGCGAATCCCAGGGGAAGACCTCATTTATATCACAAGGGGGACTAAATCAGCTCAACAACTTCATCTTTGCTCTGGCAATTATGCAGATCGTGTACAGTGTTCTGACAATGGCCTTAGGAAGAGCCAAGATGAAGCGTTGGGAAGCGTGGGAAAGAGAAACTCAGACGGTGGATTACCAAGTCGCAAATGGTAAGATAAATGATATGAGCAAACAAAAAATTGTGCTAGTTCTTGGAACCAAACTGGAAGTGGTGGTGGCCAGAATGGCTCACCAACTCGGTGACCAGCATAATGTAATCAAAGGAACTCCTCTGGTTCAACCAAAGGACAGTCACTTCTGGTTCAATAGACCGCGTTACAATTTGGGATACACTCTTGCTACCATGAACACATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

277

Amino Acids

31.29

Weight (kDa)

9.37

Isoelectric Point (pI)

32.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 8 - 211 3.4e-62 Mlo family
Mlo PF03094 220 - 267 3.9e-15 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 793
AciI CCGC 1 cut(s) 791
AclWI GGATC 2 cut(s) 100, 441
AcoI YGGCCR 1 cut(s) 696
AfaI GTAC 2 cut(s) 403, 533
AgsI TTSAA 3 cut(s) 365, 758, 784
AhlI ACTAGT 1 cut(s) 407
AjnI CCWGG 1 cut(s) 447
AluBI AGCT 2 cut(s) 172, 490
AluI AGCT 2 cut(s) 172, 490
Alw21I GWGCWC 2 cut(s) 102, 344
AlwI GGATC 2 cut(s) 100, 441
AoxI GGCC 3 cut(s) 159, 549, 696
AsuC2I CCSGG 1 cut(s) 346
AsuHPI GGTGA 2 cut(s) 701, 731
AxyI CCTNAGG 1 cut(s) 553
BalI TGGCCA 1 cut(s) 698
BanII GRGCYC 1 cut(s) 52
BbsI GAAGAC 3 cut(s) 64, 385, 461
Bbv12I GWGCWC 2 cut(s) 102, 344
BccI CCATC 2 cut(s) 117, 225
BceAI ACGGC 1 cut(s) 146
BciT130I CCWGG 1 cut(s) 449
BciVI GTATCC 1 cut(s) 800
BcnI CCSGG 1 cut(s) 346
BcuI ACTAGT 1 cut(s) 407
BfaI CTAG 3 cut(s) 383, 408, 665
BfuI GTATCC 1 cut(s) 800
BglI GCCNNNNNGGC 1 cut(s) 704
BmcAI AGTACT 1 cut(s) 403
Bme1390I CCNGG 2 cut(s) 346, 449
BmiI GGNNCC 1 cut(s) 676
BmrFI CCNGG 2 cut(s) 346, 449
BmrI ACTGGG 1 cut(s) 36
BmsI GCATC 1 cut(s) 359
BmuI ACTGGG 1 cut(s) 36
BpiI GAAGAC 3 cut(s) 64, 385, 461
BpuMI CCSGG 1 cut(s) 346
BsaJI CCNNGG 3 cut(s) 345, 447, 448
Bse1I ACTGG 2 cut(s) 42, 687
Bse21I CCTNAGG 1 cut(s) 553
BseBI CCWGG 1 cut(s) 449
BseDI CCNNGG 3 cut(s) 345, 447, 448
BseMII CTCAG 2 cut(s) 420, 614
BseNI ACTGG 2 cut(s) 42, 687
BseRI GAGGAG 1 cut(s) 738
Bsh1236I CGCG 1 cut(s) 793
Bsh1285I CGRYCG 1 cut(s) 331
BshFI GGCC 3 cut(s) 161, 551, 698
BsiEI CGRYCG 1 cut(s) 331
BsiHKAI GWGCWC 2 cut(s) 102, 344
BsiSI CCGG 1 cut(s) 345
BslFI GGGAC 2 cut(s) 190, 492
BsmFI GGGAC 2 cut(s) 190, 492
BsnI GGCC 3 cut(s) 161, 551, 698
Bsp1286I GDGCHC 3 cut(s) 52, 102, 344
Bsp1407I TGTACA 1 cut(s) 531
Bsp143I GATC 4 cut(s) 105, 328, 433, 525
BspACI CCGC 1 cut(s) 791
BspANI GGCC 3 cut(s) 161, 551, 698
BspCNI CTCAG 2 cut(s) 421, 613
BspFNI CGCG 1 cut(s) 793
BspLI GGNNCC 1 cut(s) 676
BspPI GGATC 2 cut(s) 100, 441
BspQI GCTCTTC 1 cut(s) 553
BsrGI TGTACA 1 cut(s) 531
BsrI ACTGG 2 cut(s) 42, 687
BssECI CCNNGG 3 cut(s) 345, 447, 448
BssMI GATC 4 cut(s) 105, 328, 433, 525
Bst2UI CCWGG 1 cut(s) 449
Bst4CI ACNGT 5 cut(s) 61, 220, 536, 607, 770
Bst6I CTCTTC 2 cut(s) 95, 553
BstAUI TGTACA 1 cut(s) 531
BstDEI CTNAG 3 cut(s) 429, 553, 600
BstEII GGTNACC 1 cut(s) 719
BstFNI CGCG 1 cut(s) 793
BstKTI GATC 4 cut(s) 108, 331, 436, 528
BstMBI GATC 4 cut(s) 105, 328, 433, 525
BstMCI CGRYCG 1 cut(s) 331
BstMWI GCNNNNNNNGC 2 cut(s) 339, 704
BstNI CCWGG 1 cut(s) 449
BstNSI RCATGY 1 cut(s) 337
BstPI GGTNACC 1 cut(s) 719
BstSCI CCNGG 2 cut(s) 344, 447
BstUI CGCG 1 cut(s) 793
BstV2I GAAGAC 3 cut(s) 64, 385, 461
Bsu36I CCTNAGG 1 cut(s) 553
BsuI GTATCC 1 cut(s) 800
BsuRI GGCC 3 cut(s) 161, 551, 698
BtsI GCAGTG 1 cut(s) 436
BtsIMutI CAGTG 3 cut(s) 186, 436, 541
Csp6I GTAC 2 cut(s) 402, 532
CspCI CAANNNNNGTGG 2 cut(s) 244, 279
CviAII CATG 3 cut(s) 202, 334, 823
CviQI GTAC 2 cut(s) 402, 532
DdeI CTNAG 3 cut(s) 429, 553, 600
DpnI GATC 4 cut(s) 107, 330, 435, 527
DpnII GATC 4 cut(s) 105, 328, 433, 525
EaeI YGGCCR 1 cut(s) 696
Eam1104I CTCTTC 2 cut(s) 95, 553
EarI CTCTTC 2 cut(s) 95, 553
Eco24I GRGCYC 1 cut(s) 52
Eco81I CCTNAGG 1 cut(s) 553
Eco91I GGTNACC 1 cut(s) 719
EcoO65I GGTNACC 1 cut(s) 719
EcoRII CCWGG 1 cut(s) 447
EcoT38I GRGCYC 1 cut(s) 52
FaeI CATG 3 cut(s) 205, 337, 826
FaqI GGGAC 2 cut(s) 190, 492
FatI CATG 3 cut(s) 201, 333, 822
FriOI GRGCYC 1 cut(s) 52
FspBI CTAG 3 cut(s) 383, 408, 665
HaeIII GGCC 3 cut(s) 161, 551, 698
HapII CCGG 1 cut(s) 345
Hin1II CATG 3 cut(s) 205, 337, 826
HinfI GANTC 1 cut(s) 443
HpaII CCGG 1 cut(s) 345
HphI GGTGA 2 cut(s) 701, 731
Hpy166II GTNNAC 1 cut(s) 532
Hpy188I TCNGA 4 cut(s) 10, 430, 543, 603
Hpy8I GTNNAC 1 cut(s) 532
HpyAV CCTTC 1 cut(s) 5
HpyCH4III ACNGT 5 cut(s) 61, 220, 536, 607, 770
HpyCH4V TGCA 6 cut(s) 31, 149, 249, 266, 285, 523
HpyF10VI GCNNNNNNNGC 2 cut(s) 339, 704
HpyF3I CTNAG 3 cut(s) 429, 553, 600
Hsp92II CATG 3 cut(s) 205, 337, 826
Kzo9I GATC 4 cut(s) 105, 328, 433, 525
LguI GCTCTTC 1 cut(s) 553
LmnI GCTCC 2 cut(s) 29, 339
LweI GCATC 1 cut(s) 359
MaeI CTAG 3 cut(s) 383, 408, 665
MaeIII GTNAC 4 cut(s) 220, 719, 770, 794
MalI GATC 4 cut(s) 107, 330, 435, 527
MboI GATC 4 cut(s) 105, 328, 433, 525
MboII GAAGA 6 cut(s) 64, 82, 390, 407, 466, 570
MhlI GDGCHC 3 cut(s) 52, 102, 344
MlsI TGGCCA 1 cut(s) 698
MluCI AATT 4 cut(s) 122, 516, 657, 799
MluNI TGGCCA 1 cut(s) 698
MnlI CCTC 4 cut(s) 151, 424, 469, 759
Mox20I TGGCCA 1 cut(s) 698
MscI TGGCCA 1 cut(s) 698
MslI CAYNNNNRTG 1 cut(s) 229
Msp20I TGGCCA 1 cut(s) 698
MspI CCGG 1 cut(s) 345
MspR9I CCNGG 2 cut(s) 346, 449
MvaI CCWGG 1 cut(s) 449
MvnI CGCG 1 cut(s) 793
MwoI GCNNNNNNNGC 2 cut(s) 339, 704
NciI CCSGG 1 cut(s) 346
NdeII GATC 4 cut(s) 105, 328, 433, 525
NlaIII CATG 3 cut(s) 205, 337, 826
NlaIV GGNNCC 1 cut(s) 676
NmuCI GTSAC 2 cut(s) 719, 770
NspI RCATGY 1 cut(s) 337
PasI CCCWGGG 1 cut(s) 448
PciSI GCTCTTC 1 cut(s) 553
PfeI GAWTC 1 cut(s) 443
Ple19I CGATCG 1 cut(s) 331
Psp6I CCWGG 1 cut(s) 447
PspEI GGTNACC 1 cut(s) 719
PspGI CCWGG 1 cut(s) 447
PspN4I GGNNCC 1 cut(s) 676
PsrI GAACNNNNNNTAC 2 cut(s) 394, 426
PvuI CGATCG 1 cut(s) 331
RsaI GTAC 2 cut(s) 403, 533
RsaNI GTAC 2 cut(s) 402, 532
RseI CAYNNNNRTG 1 cut(s) 229
SapI GCTCTTC 1 cut(s) 553
Sau3AI GATC 4 cut(s) 105, 328, 433, 525
ScaI AGTACT 1 cut(s) 403
ScrFI CCNGG 2 cut(s) 346, 449
SduI GDGCHC 3 cut(s) 52, 102, 344
SetI ASST 3 cut(s) 174, 461, 492
SfaNI GCATC 1 cut(s) 359
SmiMI CAYNNNNRTG 1 cut(s) 229
SpeI ACTAGT 1 cut(s) 407
Sse9I AATT 4 cut(s) 122, 516, 657, 799
SsiI CCGC 1 cut(s) 791
SspI AATATT 1 cut(s) 244
SspMI CTAG 3 cut(s) 383, 408, 665
StyD4I CCNGG 2 cut(s) 344, 447
TaaI ACNGT 5 cut(s) 61, 220, 536, 607, 770
TaqI TCGA 2 cut(s) 156, 327
TasI AATT 4 cut(s) 122, 516, 657, 799
TatI WGTACW 2 cut(s) 401, 531
TfiI GAWTC 1 cut(s) 443
TscAI CASTG 3 cut(s) 186, 443, 541
TseFI GTSAC 2 cut(s) 719, 770
Tsp45I GTSAC 2 cut(s) 719, 770
TspDTI ATGAA 5 cut(s) 64, 82, 190, 490, 584
TspRI CASTG 3 cut(s) 186, 443, 541
XceI RCATGY 1 cut(s) 337
XcmI CCANNNNNNNNNTGG 3 cut(s) 49, 623, 685
XspI CTAG 3 cut(s) 383, 408, 665
ZrmI AGTACT 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.