Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002318

Physical Location & Seq

Genomic Coordinates Forward (+)

44040138 .. 44049507

Gene Structure 9370 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0352700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGATTTGTCAACCCTCCAAATCCAATCGAAGAGAGCTCCACCACCACCACCACCAGTCTCTCGCAACAATCGCCAGTGCCTCCTCATCTCCTGCCTCTCTCTCCTCGCCCTCCCCTTCCTCTTCTACCTCGTCTCCACCGCCCACAAGCTCCACCTCTCCCCCAAATTCACCCACTCCGAATCCACCCTCTTCGGCATTGTCATCACCGCCGCCCCCACCGCCTCCCGCATCCGCGTCTTCCATTTCCTCGACGCCACCGCCACCGCTCCCTCTACCTCCTCCCGCTCTCGCCCCGCCCTCTCCTCCTTCGCCGCCCGCCCCGACGCCGCCGGCGCCTCCCTCGCGCCGCTGCTCCGCTTCGCCAAGTCGCAGGTGCCGATGAAAGAGCGAGCCAGTACGAAGCTCCTCTTGTTTGCTTCCCCGGAGCTCCAGGACTTGGGCCAGGAGATCGCCGAGAAGCTTCTCGAGTCGTGTAGGAAGGTGCTCAGATCTTCCGGGTTTTGGTTCAAGGACGATTGGGCCAGAGTGGTCTCAGGTGAAGAGCAAGGGGTTTATGCTTGGGTGAGTGCCAATTACGCTCTCGGAACATTGAAGAGTGAGGCTGAAGAAACCACTGGGATAGTTGAACTCGGTGGGGCTTCTTTGCAGGTTACATTTGCCCAAAAAGAAACACTCCAAGTGCAATCTTCTCCGTCTCGAGTTATCAAATTGTTTGGAGTTACTTATCACCTTTATAGCCACGGCTTGCCGCAATTTGGCCAGGATGCGGCTTGGGAATCATTGTATGAAAACTACAGAAAATCGACACCTTTTTCAGATTCTAGAAAGGGGAGTATTGTTAACCCTTGTGTACCTAGAGGATATAAGCTGACAGTGAATGCCAGTGATGAACAACTTCTAGTGTCTTCGCTGGGCGGAAACTTTTCTGAATGCAAGTCTCAAGTTTTGGCACTATTAAAGAGCAAACGAGATAAATGCGTGCAGGCACCTTGCACAATTGTCTCATCATTTCCTTTCGAGATAGGGGGCAAGCCAATTTCCGCAAACTTCTTATTTACTTCTGAGGGGGTCAAGCAATCAAGGCATCAGACATCCTACGCAACACAGACAGCCTACACAACACACAGTAATGGACCAAACCTTTTTGGGCTTGTTCCCAGGGCTTCTTTGTTTGAGTTGGAGGCAGCTGGTCTACAATACTGTGAAGACGAATGGGACAAACAGAAAAATCAACATAATATTGTTGATGATTCAGATCTGCTGAAATATTGTTTCTCATCTGCTTATATGGTGGCGCTGTTGCATGACAGTCTAGGAATCCCCATGGATGAGAAAAGGGTTGGATTTGCAAACCAGACTGGAAATATTCTCCATGATTGGACTCTCGGTGCTTTCATTGTTGAAACAATGCTGGAACCCCTTGAATGGGAACTTGATAATAATCTGGGCCAGATTGTTGGAAATGAGTCACTCACGTATTTCTCTGTCTTTGCATTTCTTTTAATAGCTGTGTTTGCTGTATTCTTTGTATTGCAATCGCGGAAACCACAGTTAAAGACTATATACGATTTAGAAAAAGGACGCTATATTATTACACGTGTACGTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0008150 GO:0008327 GO:0009628 GO:0009893 GO:0010369 GO:0010604 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031325 GO:0036094 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0080090 GO:0080167 GO:0097159 GO:0098687 GO:1901265 GO:1901363 GO:1901535 GO:1901537

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

537

Amino Acids

59.51

Weight (kDa)

8.43

Isoelectric Point (pI)

47.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDA1_CD39	PF01150	58 - 475	1.1e-54	GDA1/CD39 (nucleoside phosphatase) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002318)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59800
fragaria_vesca	FvH4_3g35002 FvH4_3g35002 FvH4_3g35010
malus_domestica	MD03G1099400.v1.1 MD03G1099500.v1.1 MD11G1113700.v1.1
prunus_persica	Prupe.6G084200_v2.0.a1 Prupe.6G084200_v2.0.a1 Prupe.6G084200_v2.0.a1 Prupe.6G084300_v2.0.a1 Prupe.6G084500_v2.0.a1
pyrus_communis	pycom03g08180 pycom03g08190 pycom11g09570
rosa_chinensis	RchiOBHm_Chr5g0062921 RchiOBHm_Chr5g0062931
rosa_laevigata	RLG00000009507 RLG00000035590 RLG00000035591
rosa_multiflora	Rmu_co7996734.1_g000001 Rmu_sc0000192.1_g000027 Rmu_sc0001738.1_g000035 Rmu_sc0003303.1_g000011 Rmu_sc0006171.1_g000008 Rmu_sc0010322.1_g000002 Rmu_sc0010322.1_g000003
rosa_roxburghii	Rroxscaffold_1G00017700 Rroxscaffold_1G00017710
rosa_rugosa	Rorug05G0352700 Rorug05G0352700 Rorug05G0352800 Rorug05G0352900
rosa_samantha	Rh5AG413800 Rh5AG413900 Rh5BG428000 Rh5BG428100 Rh5CG451600 Rh5CG451700 Rh5DG441700 Rh5DG441800
rosa_wichuraiana	Rw5G038880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	364
Acc36I	ACCTGC	2 cut(s)	364, 640
AccB1I	GGYRCC	3 cut(s)	335, 376, 988
AccB7I	CCANNNNNTGG	1 cut(s)	439
AccBSI	CCGCTC	2 cut(s)	269, 288
AccI	GTMKAC	1 cut(s)	1195
AccII	CGCG	3 cut(s)	237, 347, 1543
AcoI	YGGCCR	1 cut(s)	760
AcsI	RAATTY	1 cut(s)	167
AcuI	CTGAAG	1 cut(s)	627
AcvI	CACGTG	1 cut(s)	1601
AcyI	GRCGYC	3 cut(s)	255, 327, 336
AfaI	GTAC	3 cut(s)	400, 855, 1605
AfiI	CCNNNNNNNGG	6 cut(s)	439, 504, 758, 769, 1428, 1429
AflIII	ACRYGT	2 cut(s)	1598, 1600
AgsI	TTSAA	5 cut(s)	511, 595, 629, 1406, 1427
AjnI	CCWGG	4 cut(s)	432, 444, 762, 1160
AluBI	AGCT	8 cut(s)	38, 151, 406, 430, 463, 871, 1190, 1511
AluI	AGCT	8 cut(s)	38, 151, 406, 430, 463, 871, 1190, 1511
Alw21I	GWGCWC	3 cut(s)	40, 432, 489
Alw26I	GTCTC	6 cut(s)	64, 139, 538, 702, 945, 1009
Ama87I	CYCGRG	2 cut(s)	467, 699
AoxI	GGCC	4 cut(s)	442, 522, 760, 1450
ApeKI	GCWGC	2 cut(s)	352, 1187
ApoI	RAATTY	1 cut(s)	167
Asp700I	GAANNNNTTC	2 cut(s)	897, 925
AspLEI	GCGC	3 cut(s)	338, 349, 1300
AspS9I	GGNCC	4 cut(s)	442, 522, 1136, 1450
AsuC2I	CCSGG	2 cut(s)	425, 499
AsuHPI	GGTGA	5 cut(s)	163, 199, 551, 577, 722
AvaI	CYCGRG	2 cut(s)	467, 699
AvaII	GGWCC	1 cut(s)	1136
BalI	TGGCCA	1 cut(s)	762
BanI	GGYRCC	3 cut(s)	335, 376, 988
BanII	GRGCYC	2 cut(s)	40, 432
BbrPI	CACGTG	1 cut(s)	1601
BbsI	GAAGAC	3 cut(s)	232, 900, 1215
Bbv12I	GWGCWC	3 cut(s)	40, 432, 489
BbvI	GCAGC	2 cut(s)	339, 1199
BceAI	ACGGC	1 cut(s)	760
BcgI	CGANNNNNNTGC	2 cut(s)	960, 994
BciT130I	CCWGG	4 cut(s)	434, 446, 764, 1162
BcnI	CCSGG	2 cut(s)	425, 499
BcoDI	GTCTC	6 cut(s)	64, 139, 538, 702, 945, 1009
BfaI	CTAG	4 cut(s)	825, 858, 902, 1316
BfmI	CTRYAG	1 cut(s)	796
BfoI	RGCGCY	2 cut(s)	339, 1301
BfuAI	ACCTGC	2 cut(s)	364, 640
BglII	AGATCT	2 cut(s)	491, 1258
BisI	GCNGC	8 cut(s)	213, 315, 330, 350, 353, 752, 771, 1188
BlsI	GCNGC	8 cut(s)	214, 316, 331, 351, 354, 753, 772, 1189
Bme1390I	CCNGG	6 cut(s)	425, 434, 446, 499, 764, 1162
Bme18I	GGWCC	1 cut(s)	1136
BmeT110I	CYCGRG	2 cut(s)	467, 699
BmgT120I	GGNCC	4 cut(s)	442, 522, 1136, 1450
BmiI	GGNNCC	4 cut(s)	337, 378, 990, 1419
BmrFI	CCNGG	6 cut(s)	425, 434, 446, 499, 764, 1162
BmrI	ACTGGG	1 cut(s)	627
BmsI	GCATC	3 cut(s)	240, 757, 1096
BmuI	ACTGGG	1 cut(s)	627
BpiI	GAAGAC	3 cut(s)	232, 900, 1215
BpmI	CTGGAG	1 cut(s)	416
BpuEI	CTTGAG	1 cut(s)	927
BpuMI	CCSGG	2 cut(s)	425, 499
BsaAI	YACGTR	3 cut(s)	1479, 1601, 1607
BsaBI	GATNNNNATC	2 cut(s)	1257, 1443
BsaHI	GRCGYC	3 cut(s)	255, 327, 336
BsaI	GGTCTC	1 cut(s)	538
BsaJI	CCNNGG	5 cut(s)	423, 742, 1160, 1161, 1326
BsaXI	ACNNNNNCTCC	2 cut(s)	119, 149
Bsc4I	CCNNNNNNNGG	6 cut(s)	439, 504, 758, 769, 1428, 1429
Bse118I	RCCGGY	1 cut(s)	332
Bse1I	ACTGG	6 cut(s)	56, 76, 396, 622, 885, 1366
Bse8I	GATNNNNATC	2 cut(s)	1257, 1443
BseBI	CCWGG	4 cut(s)	434, 446, 764, 1162
BseDI	CCNNGG	5 cut(s)	423, 742, 1160, 1161, 1326
BseGI	GGATG	4 cut(s)	231, 772, 1094, 1336
BseJI	GATNNNNATC	2 cut(s)	1257, 1443
BseLI	CCNNNNNNNGG	6 cut(s)	439, 504, 758, 769, 1428, 1429
BseMII	CTCAG	3 cut(s)	502, 549, 1056
BseNI	ACTGG	6 cut(s)	56, 76, 396, 622, 885, 1366
BseRI	GAGGAG	5 cut(s)	74, 95, 271, 295, 398
BseXI	GCAGC	2 cut(s)	339, 1199
BseYI	CCCAGC	1 cut(s)	913
BsgI	GTGCAG	1 cut(s)	1004
Bsh1236I	CGCG	3 cut(s)	237, 347, 1543
BshFI	GGCC	4 cut(s)	444, 524, 762, 1452
BshNI	GGYRCC	3 cut(s)	335, 376, 988
BsiHKAI	GWGCWC	3 cut(s)	40, 432, 489
BsiHKCI	CYCGRG	2 cut(s)	467, 699
BsiSI	CCGG	3 cut(s)	333, 425, 498
BslFI	GGGAC	1 cut(s)	1232
BslI	CCNNNNNNNGG	6 cut(s)	439, 504, 758, 769, 1428, 1429
BsmAI	GTCTC	6 cut(s)	64, 139, 538, 702, 945, 1009
BsmBI	CGTCTC	2 cut(s)	139, 702
BsmFI	GGGAC	1 cut(s)	1232
BsmI	GAATGC	2 cut(s)	886, 938
BsnI	GGCC	4 cut(s)	444, 524, 762, 1452
Bso31I	GGTCTC	1 cut(s)	538
BsoBI	CYCGRG	2 cut(s)	467, 699
Bsp1286I	GDGCHC	3 cut(s)	40, 432, 489
Bsp143I	GATC	3 cut(s)	450, 491, 1258
Bsp19I	CCATGG	1 cut(s)	1326
BspANI	GGCC	4 cut(s)	444, 524, 762, 1452
BspCNI	CTCAG	3 cut(s)	501, 548, 1057
BspFNI	CGCG	3 cut(s)	237, 347, 1543
BspLI	GGNNCC	4 cut(s)	337, 378, 990, 1419
BspMI	ACCTGC	2 cut(s)	364, 640
BspQI	GCTCTTC	1 cut(s)	537
BspT107I	GGYRCC	3 cut(s)	335, 376, 988
BspTNI	GGTCTC	1 cut(s)	538
BsrBI	CCGCTC	2 cut(s)	269, 288
BsrFI	RCCGGY	1 cut(s)	332
BsrI	ACTGG	6 cut(s)	56, 76, 396, 622, 885, 1366
BssAI	RCCGGY	1 cut(s)	332
BssECI	CCNNGG	5 cut(s)	423, 742, 1160, 1161, 1326
BssMI	GATC	3 cut(s)	450, 491, 1258
BssNI	GRCGYC	3 cut(s)	255, 327, 336
BssT1I	CCWWGG	1 cut(s)	1326
Bst2UI	CCWGG	4 cut(s)	434, 446, 764, 1162
Bst4CI	ACNGT	5 cut(s)	877, 1130, 1205, 1313, 1554
Bst6I	CTCTTC	5 cut(s)	26, 128, 197, 537, 590
BstACI	GRCGYC	3 cut(s)	255, 327, 336
BstBAI	YACGTR	3 cut(s)	1479, 1601, 1607
BstC8I	GCNNGC	7 cut(s)	319, 334, 393, 749, 983, 987, 1034
BstDEI	CTNAG	3 cut(s)	488, 535, 1065
BstDSI	CCRYGG	2 cut(s)	742, 1326
BstF5I	GGATG	4 cut(s)	231, 772, 1094, 1336
BstFNI	CGCG	3 cut(s)	237, 347, 1543
BstH2I	RGCGCY	2 cut(s)	339, 1301
BstHHI	GCGC	3 cut(s)	338, 349, 1300
BstKTI	GATC	3 cut(s)	453, 494, 1261
BstMAI	GTCTC	6 cut(s)	64, 139, 538, 702, 945, 1009
BstMBI	GATC	3 cut(s)	450, 491, 1258
BstMWI	GCNNNNNNNGC	7 cut(s)	72, 221, 335, 344, 578, 1084, 1517
BstNI	CCWGG	4 cut(s)	434, 446, 764, 1162
BstSCI	CCNGG	6 cut(s)	423, 432, 444, 497, 762, 1160
BstSFI	CTRYAG	1 cut(s)	796
BstSNI	TACGTA	1 cut(s)	1607
BstUI	CGCG	3 cut(s)	237, 347, 1543
BstV1I	GCAGC	2 cut(s)	339, 1199
BstV2I	GAAGAC	3 cut(s)	232, 900, 1215
BstX2I	RGATCY	2 cut(s)	491, 1258
BstXI	CCANNNNNNTGG	1 cut(s)	1460
BstYI	RGATCY	2 cut(s)	491, 1258
BsuRI	GGCC	4 cut(s)	444, 524, 762, 1452
BtgI	CCRYGG	2 cut(s)	742, 1326
BtsCI	GGATG	4 cut(s)	231, 772, 1094, 1336
BtsIMutI	CAGTG	4 cut(s)	83, 615, 882, 892
BveI	ACCTGC	2 cut(s)	364, 640
Cac8I	GCNNGC	7 cut(s)	319, 334, 393, 749, 983, 987, 1034
CfoI	GCGC	3 cut(s)	338, 349, 1300
Cfr10I	RCCGGY	1 cut(s)	332
Cfr13I	GGNCC	4 cut(s)	442, 522, 1136, 1450
CseI	GACGC	4 cut(s)	226, 263, 335, 1593
Csp6I	GTAC	3 cut(s)	399, 854, 1604
CviAII	CATG	3 cut(s)	1307, 1327, 1376
CviQI	GTAC	3 cut(s)	399, 854, 1604
DdeI	CTNAG	3 cut(s)	488, 535, 1065
DinI	GGCGCC	1 cut(s)	337
DpnI	GATC	3 cut(s)	452, 493, 1260
DpnII	GATC	3 cut(s)	450, 491, 1258
EaeI	YGGCCR	1 cut(s)	760
Eam1104I	CTCTTC	5 cut(s)	26, 128, 197, 537, 590
EarI	CTCTTC	5 cut(s)	26, 128, 197, 537, 590
EciI	GGCGGA	1 cut(s)	933
Ecl136II	GAGCTC	2 cut(s)	38, 430
Eco105I	TACGTA	1 cut(s)	1607
Eco130I	CCWWGG	1 cut(s)	1326
Eco24I	GRGCYC	2 cut(s)	40, 432
Eco31I	GGTCTC	1 cut(s)	538
Eco47I	GGWCC	1 cut(s)	1136
Eco53kI	GAGCTC	2 cut(s)	38, 430
Eco57I	CTGAAG	1 cut(s)	627
Eco72I	CACGTG	1 cut(s)	1601
Eco88I	CYCGRG	2 cut(s)	467, 699
EcoICRI	GAGCTC	2 cut(s)	38, 430
EcoRII	CCWGG	4 cut(s)	432, 444, 762, 1160
EcoT14I	CCWWGG	1 cut(s)	1326
EcoT38I	GRGCYC	2 cut(s)	40, 432
EgeI	GGCGCC	1 cut(s)	337
EheI	GGCGCC	1 cut(s)	337
ErhI	CCWWGG	1 cut(s)	1326
Esp3I	CGTCTC	2 cut(s)	139, 702
FaeI	CATG	3 cut(s)	1310, 1330, 1379
FalI	AAGNNNNNCTT	2 cut(s)	395, 427
FaqI	GGGAC	1 cut(s)	1232
FatI	CATG	3 cut(s)	1306, 1326, 1375
FauI	CCCGC	4 cut(s)	236, 293, 304, 326
FblI	GTMKAC	1 cut(s)	1195
Fnu4HI	GCNGC	8 cut(s)	213, 315, 330, 350, 353, 752, 771, 1188
FokI	GGATG	4 cut(s)	218, 779, 1081, 1343
FriOI	GRGCYC	2 cut(s)	40, 432
Fsp4HI	GCNGC	8 cut(s)	213, 315, 330, 350, 353, 752, 771, 1188
FspBI	CTAG	4 cut(s)	825, 858, 902, 1316
GlaI	GCGC	3 cut(s)	337, 348, 1299
GluI	GCNGC	8 cut(s)	213, 315, 330, 350, 353, 752, 771, 1188
GsaI	CCCAGC	1 cut(s)	917
GsuI	CTGGAG	1 cut(s)	416
HaeII	RGCGCY	2 cut(s)	339, 1301
HaeIII	GGCC	4 cut(s)	444, 524, 762, 1452
HapII	CCGG	3 cut(s)	333, 425, 498
HgaI	GACGC	4 cut(s)	226, 263, 335, 1593
HhaI	GCGC	3 cut(s)	338, 349, 1300
Hin1I	GRCGYC	3 cut(s)	255, 327, 336
Hin1II	CATG	3 cut(s)	1310, 1330, 1379
Hin6I	GCGC	3 cut(s)	336, 347, 1298
HinP1I	GCGC	3 cut(s)	336, 347, 1298
HincII	GTYRAC	2 cut(s)	12, 844
HindII	GTYRAC	2 cut(s)	12, 844
HindIII	AAGCTT	1 cut(s)	461
HinfI	GANTC	8 cut(s)	182, 470, 779, 821, 1253, 1320, 1384, 1469
HpaI	GTTAAC	1 cut(s)	844
HpaII	CCGG	3 cut(s)	333, 425, 498
HphI	GGTGA	5 cut(s)	163, 199, 551, 577, 722
Hpy166II	GTNNAC	5 cut(s)	12, 844, 854, 1196, 1604
Hpy188I	TCNGA	8 cut(s)	181, 491, 587, 820, 931, 1066, 1092, 1258
Hpy188III	TCNNGA	4 cut(s)	467, 699, 825, 1021
Hpy8I	GTNNAC	5 cut(s)	12, 844, 854, 1196, 1604
Hpy99I	CGWCG	2 cut(s)	257, 329
HpyAV	CCTTC	3 cut(s)	127, 319, 475
HpyCH4III	ACNGT	5 cut(s)	877, 1130, 1205, 1313, 1554
HpyCH4IV	ACGT	3 cut(s)	1478, 1600, 1606
HpyCH4V	TGCA	9 cut(s)	649, 685, 936, 985, 996, 1306, 1352, 1496, 1537
HpyF10VI	GCNNNNNNNGC	7 cut(s)	72, 221, 335, 344, 578, 1084, 1517
HpyF3I	CTNAG	3 cut(s)	488, 535, 1065
HpySE526I	ACGT	3 cut(s)	1478, 1600, 1606
Hsp92I	GRCGYC	3 cut(s)	255, 327, 336
Hsp92II	CATG	3 cut(s)	1310, 1330, 1379
HspAI	GCGC	3 cut(s)	336, 347, 1298
KasI	GGCGCC	1 cut(s)	335
KroI	GCCGGC	1 cut(s)	332
KroNI	GCCGGC	1 cut(s)	334
KspAI	GTTAAC	1 cut(s)	844
Kzo9I	GATC	3 cut(s)	450, 491, 1258
LguI	GCTCTTC	1 cut(s)	537
LmnI	GCTCC	7 cut(s)	43, 156, 274, 360, 411, 427, 435
Lsp1109I	GCAGC	2 cut(s)	339, 1199
LweI	GCATC	3 cut(s)	240, 757, 1096
MaeI	CTAG	4 cut(s)	825, 858, 902, 1316
MaeII	ACGT	3 cut(s)	1478, 1600, 1606
MaeIII	GTNAC	3 cut(s)	652, 721, 1470
MalI	GATC	3 cut(s)	452, 493, 1260
MbiI	CCGCTC	2 cut(s)	269, 288
MboI	GATC	3 cut(s)	450, 491, 1258
MfeI	CAATTG	1 cut(s)	999
MflI	RGATCY	2 cut(s)	491, 1258
MhlI	GDGCHC	3 cut(s)	40, 432, 489
MlsI	TGGCCA	1 cut(s)	762
MluCI	AATT	6 cut(s)	167, 574, 710, 755, 999, 1038
MluNI	TGGCCA	1 cut(s)	762
Mly113I	GGCGCC	1 cut(s)	336
MlyI	GAGTC	3 cut(s)	479, 1378, 1478
MmeI	TCCRAC	3 cut(s)	1161, 1324, 1441
Mox20I	TGGCCA	1 cut(s)	762
MreI	CGCCGGCG	1 cut(s)	332
MroNI	GCCGGC	1 cut(s)	332
MroXI	GAANNNNTTC	2 cut(s)	897, 925
MscI	TGGCCA	1 cut(s)	762
MseI	TTAA	4 cut(s)	843, 959, 1505, 1556
MslI	CAYNNNNRTG	1 cut(s)	1131
Msp20I	TGGCCA	1 cut(s)	762
MspA1I	CMGCKG	2 cut(s)	352, 1190
MspI	CCGG	3 cut(s)	333, 425, 498
MspR9I	CCNGG	6 cut(s)	425, 434, 446, 499, 764, 1162
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	2 cut(s)	886, 938
MvaI	CCWGG	4 cut(s)	434, 446, 764, 1162
MvnI	CGCG	3 cut(s)	237, 347, 1543
MwoI	GCNNNNNNNGC	7 cut(s)	72, 221, 335, 344, 578, 1084, 1517
NaeI	GCCGGC	1 cut(s)	334
NarI	GGCGCC	1 cut(s)	336
NciI	CCSGG	2 cut(s)	425, 499
NcoI	CCATGG	1 cut(s)	1326
NdeII	GATC	3 cut(s)	450, 491, 1258
NgoMIV	GCCGGC	1 cut(s)	332
NlaIII	CATG	3 cut(s)	1310, 1330, 1379
NlaIV	GGNNCC	4 cut(s)	337, 378, 990, 1419
NmeAIII	GCCGAG	1 cut(s)	481
NmuCI	GTSAC	1 cut(s)	1470
PaeR7I	CTCGAG	2 cut(s)	467, 699
PaqCI	CACCTGC	1 cut(s)	364
PasI	CCCWGGG	1 cut(s)	1161
PciSI	GCTCTTC	1 cut(s)	537
PcsI	WCGNNNNNNNCGW	1 cut(s)	377
PctI	GAATGC	2 cut(s)	886, 938
PdiI	GCCGGC	1 cut(s)	334
PdmI	GAANNNNTTC	2 cut(s)	897, 925
PfeI	GAWTC	5 cut(s)	182, 779, 821, 1253, 1320
PflMI	CCANNNNNTGG	1 cut(s)	439
PfoI	TCCNGGA	1 cut(s)	432
PkrI	GCNGC	8 cut(s)	214, 316, 331, 351, 354, 753, 772, 1189
PleI	GAGTC	3 cut(s)	478, 1378, 1477
PluTI	GGCGCC	1 cut(s)	339
PmaCI	CACGTG	1 cut(s)	1601
PmlI	CACGTG	1 cut(s)	1601
PpsI	GAGTC	3 cut(s)	478, 1378, 1477
Ppu21I	YACGTR	3 cut(s)	1479, 1601, 1607
Psp124BI	GAGCTC	2 cut(s)	40, 432
Psp6I	CCWGG	4 cut(s)	432, 444, 762, 1160
PspCI	CACGTG	1 cut(s)	1601
PspFI	CCCAGC	1 cut(s)	913
PspGI	CCWGG	4 cut(s)	432, 444, 762, 1160
PspN4I	GGNNCC	4 cut(s)	337, 378, 990, 1419
PspPI	GGNCC	4 cut(s)	442, 522, 1136, 1450
PsuI	RGATCY	2 cut(s)	491, 1258
PvuII	CAGCTG	1 cut(s)	1190
RsaI	GTAC	3 cut(s)	400, 855, 1605
RsaNI	GTAC	3 cut(s)	399, 854, 1604
RseI	CAYNNNNRTG	1 cut(s)	1131
SacI	GAGCTC	2 cut(s)	40, 432
SapI	GCTCTTC	1 cut(s)	537
SaqAI	TTAA	4 cut(s)	843, 959, 1505, 1556
SatI	GCNGC	8 cut(s)	213, 315, 330, 350, 353, 752, 771, 1188
Sau3AI	GATC	3 cut(s)	450, 491, 1258
Sau96I	GGNCC	4 cut(s)	442, 522, 1136, 1450
SchI	GAGTC	3 cut(s)	479, 1378, 1478
ScrFI	CCNGG	6 cut(s)	425, 434, 446, 499, 764, 1162
SduI	GDGCHC	3 cut(s)	40, 432, 489
SfaNI	GCATC	3 cut(s)	240, 757, 1096
SfcI	CTRYAG	1 cut(s)	796
SfoI	GGCGCC	1 cut(s)	337
Sfr274I	CTCGAG	2 cut(s)	467, 699
SgrAI	CRCCGGYG	1 cut(s)	332
SinI	GGWCC	1 cut(s)	1136
SlaI	CTCGAG	2 cut(s)	467, 699
SmiMI	CAYNNNNRTG	1 cut(s)	1131
SmlI	CTYRAG	3 cut(s)	467, 699, 942
SmoI	CTYRAG	3 cut(s)	467, 699, 942
SnaBI	TACGTA	1 cut(s)	1607
Sse9I	AATT	6 cut(s)	167, 574, 710, 755, 999, 1038
SspDI	GGCGCC	1 cut(s)	335
SspI	AATATT	3 cut(s)	1243, 1271, 1369
SspMI	CTAG	4 cut(s)	825, 858, 902, 1316
SstI	GAGCTC	2 cut(s)	40, 432
StyD4I	CCNGG	6 cut(s)	423, 432, 444, 497, 762, 1160
StyI	CCWWGG	1 cut(s)	1326
TaaI	ACNGT	5 cut(s)	877, 1130, 1205, 1313, 1554
TaiI	ACGT	3 cut(s)	1481, 1603, 1609
TaqI	TCGA	6 cut(s)	29, 252, 468, 700, 806, 1020
TasI	AATT	6 cut(s)	167, 574, 710, 755, 999, 1038
TauI	GCSGC	6 cut(s)	215, 317, 332, 352, 754, 773
TfiI	GAWTC	5 cut(s)	182, 779, 821, 1253, 1320
Tru1I	TTAA	4 cut(s)	843, 959, 1505, 1556
Tru9I	TTAA	4 cut(s)	843, 959, 1505, 1556
TscAI	CASTG	4 cut(s)	83, 622, 882, 892
TseFI	GTSAC	1 cut(s)	1470
TseI	GCWGC	2 cut(s)	352, 1187
Tsp45I	GTSAC	1 cut(s)	1470
TspDTI	ATGAA	4 cut(s)	398, 804, 906, 1387
TspGWI	ACGGA	1 cut(s)	684
TspRI	CASTG	4 cut(s)	83, 622, 882, 892
Van91I	CCANNNNNTGG	1 cut(s)	439
VpaK11BI	GGWCC	1 cut(s)	1136
XapI	RAATTY	1 cut(s)	167
XbaI	TCTAGA	1 cut(s)	824
XhoI	CTCGAG	2 cut(s)	467, 699
XmiI	GTMKAC	1 cut(s)	1195
XmnI	GAANNNNTTC	2 cut(s)	897, 925
XspI	CTAG	4 cut(s)	825, 858, 902, 1316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.