Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002318

Physical Location & Seq

Genomic Coordinates Reverse (-)

44063612 .. 44065306

Gene Structure 1695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0352900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCATTTGAATGCCAAGTGAATACTGAGGTTTCTAAGAATTTGATCGACTCTCTAGACAATCCGCTCGGACAGTTAGCTGAATCTAATCAATTTCATTCTCAAATTGAAGCTGAAAATTTTGGTGTTTCAAAAGTAGCTTCAGATTCATATACTAAAAAAGAAAAAGGTGTAATTTCAAAACCCAAACCAGTTTCTAGTTCCAAGAAAGCAAATCCGGACTCTTGTGGTTCGAAACACCTTTTGTCAACTGATCGGTCAATCACTGACCTTCCTCCAGCTTTGATATCCGAAATTCTGAATTGCCTTGACCCGAAAGAGCTAGGCATAGTTTCATGTGCATCGACATATCTCTGTAGGCTCGCATCTGAGCACCATGTTTGGAAGGAGTTTTATTGTGAGAGATGGGGACTTTCAGCGGCTCCAGCATCCTTGGGTTCAGGACTTTCTGATGACAAGTCATGGAAGGATTTTTTTGTCGAAAGGGAGTTTAGGAGTAAGACTTTTATGGGACGGTATAGCATGGAAATTTTGTATGGTCATACTGAACCTGTTCGAACAGTTTTCCTTTTGGCCTCGGCAAAGCTCTTATTTACATCAGGTTATGACCAAACCGTAAAAATGTGGAACATGGAAGAAGGGCTGTTGATTGCTTCTTCAAGGTCTCTTGGTTGCACTATCCGTGCAGTTGCTGCAGATACAAAACTCTTGGTTGCGGGTGGCACTGATGGTTTTATCCACTGTTGGAAGGCAATAGAAGGGAGTCCACACTTGTTTAATATCAGGGGTCCTCAAAATGAGAATACTGAGTTTCGTCTGTGGGAGCATCAGGGTCCTATAACATCTCTTGCGTTGGATTTTACAAGGATTTATAGTGGTTCGTGGGATATGACTGTTCGTGTATGGGATCGACTTTCACTGAAGTGTGTTAAGGTCCTGCGCCATAGTGATTGGGTTGGGGGACTTGCACCTCATGATACTACACTTGCTAGCACAGCTGGTTCGGATGTCTATGTTTGGGACACTAGCAGTGGGAATCTGATGACCATTATTCATAATGCTCATGTTGGCAAAACTTGCTCCTTGGCCAGAAACCACAAAGGGGATTTTCTATTTACCGGAGGGGAAGATGGTGCAATTCACATGTATGAAATTCTGAGTCATGGGCTTGAGACTAATGAATATTTGGTTGCAACATGGATCCCTCACTCGGGCCCTGTGCATTCCCTTGCGTTTGAGTTTCCATGGCTTGTTTCTGCTTCTGGTGATGGGAAGCTATCACTAATTGATGTGAGAAAGCTTTTAAAAACTAGAAAGCGTGCTTCAGGGACAAGTGCTTCATGTGTTAAGCATGGAGACCGGAGTAGTGTAGAAGCCCCACAGAGAATGCTACATGGATTTGCAAAGAATCTCCTCTCAGTCAACATTGGTGCTGATCGTATTGTATGTGGGGGTGAGGAAGGTGTTGTTAGGATCTGGAACTTCACACAAGCTCTGGAGATTGAGCGAAGGGCTAATGCTTTAAGAGGAATACGATTAGAGAATAGGATGAGGCGGCGTAAGCTCCATGTAGAGAATAGCAGCAAAGGTGGTCGCACTGATCAATGCTCAGTTGCAGCCAAGAAGAATCCAGTCACTGGTGAAAGGAGTGGTTGGCACAGTAAACGTGGGGCGAGTGGCAAGCTGAGAGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0008150 GO:0008327 GO:0009628 GO:0009893 GO:0010369 GO:0010604 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031325 GO:0036094 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043565 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0060255 GO:0065007 GO:0080090 GO:0080167 GO:0097159 GO:0098687 GO:1901265 GO:1901363 GO:1901535 GO:1901537

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MBD

Protein Analysis

564

Amino Acids

62.34

Weight (kDa)

8.82

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	88 - 133	1e-06	F-box-like
Beta-prop_WDR5	PF25175	150 - 254	3.4e-07	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	176 - 250	1.5e-07	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	180 - 384	1.4e-16	WDR5 beta-propeller domain
WD40_Prp19	PF24814	221 - 441	6.8e-12	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	231 - 438	1.9e-12	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	276 - 497	2.8e-13	WDR5 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	283 - 386	4.8e-06	WDR3 second beta-propeller domain
WD40_CDC20-Fz	PF24807	328 - 434	6.3e-07	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	329 - 432	2.9e-08	WDR3 first beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002318)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59800
fragaria_vesca	FvH4_3g35002 FvH4_3g35002 FvH4_3g35010
malus_domestica	MD03G1099400.v1.1 MD03G1099500.v1.1 MD11G1113700.v1.1
prunus_persica	Prupe.6G084200_v2.0.a1 Prupe.6G084200_v2.0.a1 Prupe.6G084200_v2.0.a1 Prupe.6G084300_v2.0.a1 Prupe.6G084500_v2.0.a1
pyrus_communis	pycom03g08180 pycom03g08190 pycom11g09570
rosa_chinensis	RchiOBHm_Chr5g0062921 RchiOBHm_Chr5g0062931
rosa_laevigata	RLG00000009507 RLG00000035590 RLG00000035591
rosa_multiflora	Rmu_co7996734.1_g000001 Rmu_sc0000192.1_g000027 Rmu_sc0001738.1_g000035 Rmu_sc0003303.1_g000011 Rmu_sc0006171.1_g000008 Rmu_sc0010322.1_g000002 Rmu_sc0010322.1_g000003
rosa_roxburghii	Rroxscaffold_1G00017700 Rroxscaffold_1G00017710
rosa_rugosa	Rorug05G0352700 Rorug05G0352700 Rorug05G0352800 Rorug05G0352900
rosa_samantha	Rh5AG413800 Rh5AG413900 Rh5BG428000 Rh5BG428100 Rh5CG451600 Rh5CG451700 Rh5DG441700 Rh5DG441800
rosa_wichuraiana	Rw5G038880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1637
AccBSI	CCGCTC	1 cut(s)	67
AccIII	TCCGGA	1 cut(s)	217
AciI	CCGC	4 cut(s)	65, 419, 716, 1555
AclWI	GGATC	4 cut(s)	915, 1195, 1208, 1481
AcoI	YGGCCR	1 cut(s)	1086
AcsI	RAATTY	5 cut(s)	40, 118, 294, 528, 1152
AcuI	CTGAAG	3 cut(s)	126, 941, 1308
AfiI	CCNNNNNNNGG	4 cut(s)	1102, 1210, 1211, 1637
AflIII	ACRYGT	1 cut(s)	1143
AgsI	TTSAA	5 cut(s)	11, 110, 132, 180, 660
AleI	CACNNNNGTG	1 cut(s)	922
Alw21I	GWGCWC	1 cut(s)	375
Alw26I	GTCTC	3 cut(s)	669, 1166, 1350
AlwI	GGATC	4 cut(s)	915, 1195, 1208, 1481
AlwNI	CAGNNNCTG	2 cut(s)	692, 1637
Ama87I	CYCGRG	1 cut(s)	1210
Aor13HI	TCCGGA	1 cut(s)	217
AoxI	GGCC	3 cut(s)	573, 1086, 1213
ApaI	GGGCCC	1 cut(s)	1217
ApeKI	GCWGC	3 cut(s)	692, 1581, 1616
ApoI	RAATTY	5 cut(s)	40, 118, 294, 528, 1152
Asp700I	GAANNNNTTC	1 cut(s)	552
AspLEI	GCGC	1 cut(s)	942
AspS9I	GGNCC	5 cut(s)	788, 833, 934, 1213, 1214
AsuHPI	GGTGA	3 cut(s)	1277, 1466, 1652
AsuII	TTCGAA	2 cut(s)	233, 556
AsuNHI	GCTAGC	1 cut(s)	989
AvaI	CYCGRG	1 cut(s)	1210
AvaII	GGWCC	3 cut(s)	788, 833, 934
BaeGI	GKGCMC	1 cut(s)	1217
BalI	TGGCCA	1 cut(s)	1088
BamHI	GGATCC	1 cut(s)	1200
BanII	GRGCYC	1 cut(s)	1217
Bbv12I	GWGCWC	1 cut(s)	375
BbvI	GCAGC	3 cut(s)	679, 1593, 1628
BccI	CCATC	4 cut(s)	399, 722, 1124, 1262
BclI	TGATCA	1 cut(s)	1600
BcoDI	GTCTC	3 cut(s)	669, 1166, 1350
BfaI	CTAG	6 cut(s)	56, 198, 323, 990, 1026, 1311
BfmI	CTRYAG	2 cut(s)	355, 693
BisI	GCNGC	5 cut(s)	420, 693, 1556, 1582, 1617
BlsI	GCNGC	5 cut(s)	421, 694, 1557, 1583, 1618
Bme18I	GGWCC	3 cut(s)	788, 833, 934
BmeT110I	CYCGRG	1 cut(s)	1210
BmgT120I	GGNCC	5 cut(s)	788, 833, 934, 1213, 1214
BmiI	GGNNCC	5 cut(s)	423, 789, 834, 1202, 1215
BmsI	GCATC	4 cut(s)	350, 374, 437, 835
BmtI	GCTAGC	1 cut(s)	993
BpmI	CTGGAG	3 cut(s)	261, 408, 1517
Bpu14I	TTCGAA	2 cut(s)	233, 556
BpuEI	CTTGAG	1 cut(s)	1190
BsaI	GGTCTC	2 cut(s)	669, 1350
BsaJI	CCNNGG	4 cut(s)	432, 576, 1083, 1244
BsaWI	WCCGGW	3 cut(s)	217, 1118, 1359
Bsc4I	CCNNNNNNNGG	4 cut(s)	1102, 1210, 1211, 1637
Bse1I	ACTGG	3 cut(s)	191, 1631, 1642
BseAI	TCCGGA	1 cut(s)	217
BseDI	CCNNGG	4 cut(s)	432, 576, 1083, 1244
BseGI	GGATG	3 cut(s)	428, 1012, 1554
BseLI	CCNNNNNNNGG	4 cut(s)	1102, 1210, 1211, 1637
BseMII	CTCAG	7 cut(s)	18, 360, 798, 1148, 1431, 1623, 1676
BseNI	ACTGG	3 cut(s)	191, 1631, 1642
BseRI	GAGGAG	1 cut(s)	1403
BseSI	GKGCMC	1 cut(s)	1217
BseXI	GCAGC	3 cut(s)	679, 1593, 1628
BsgI	GTGCAG	1 cut(s)	705
BshFI	GGCC	3 cut(s)	575, 1088, 1215
BsiHKAI	GWGCWC	1 cut(s)	375
BsiHKCI	CYCGRG	1 cut(s)	1210
BsiSI	CCGG	3 cut(s)	218, 1119, 1360
BslFI	GGGAC	5 cut(s)	423, 525, 975, 1034, 1342
BslI	CCNNNNNNNGG	4 cut(s)	1102, 1210, 1211, 1637
BsmAI	GTCTC	3 cut(s)	669, 1166, 1350
BsmFI	GGGAC	5 cut(s)	423, 525, 975, 1034, 1342
BsmI	GAATGC	3 cut(s)	17, 1222, 1392
BsnI	GGCC	3 cut(s)	575, 1088, 1215
Bso31I	GGTCTC	2 cut(s)	669, 1350
BsoBI	CYCGRG	1 cut(s)	1210
Bsp119I	TTCGAA	2 cut(s)	233, 556
Bsp120I	GGGCCC	1 cut(s)	1213
Bsp1286I	GDGCHC	2 cut(s)	375, 1217
Bsp13I	TCCGGA	1 cut(s)	217
Bsp143I	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
Bsp19I	CCATGG	1 cut(s)	1244
BspACI	CCGC	4 cut(s)	65, 419, 716, 1555
BspANI	GGCC	3 cut(s)	575, 1088, 1215
BspCNI	CTCAG	7 cut(s)	19, 361, 799, 1149, 1430, 1622, 1677
BspEI	TCCGGA	1 cut(s)	217
BspHI	TCATGA	1 cut(s)	973
BspLI	GGNNCC	5 cut(s)	423, 789, 834, 1202, 1215
BspMAI	CTGCAG	1 cut(s)	697
BspOI	GCTAGC	1 cut(s)	993
BspPI	GGATC	4 cut(s)	915, 1195, 1208, 1481
BspT104I	TTCGAA	2 cut(s)	233, 556
BspTNI	GGTCTC	2 cut(s)	669, 1350
BsrBI	CCGCTC	1 cut(s)	67
BsrI	ACTGG	3 cut(s)	191, 1631, 1642
BssECI	CCNNGG	4 cut(s)	432, 576, 1083, 1244
BssMI	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
BssT1I	CCWWGG	3 cut(s)	432, 1083, 1244
Bst4CI	ACNGT	7 cut(s)	75, 516, 562, 616, 743, 895, 1661
BstAPI	GCANNNNNTGC	2 cut(s)	692, 1077
BstBI	TTCGAA	2 cut(s)	233, 556
BstC8I	GCNNGC	4 cut(s)	363, 991, 1320, 1682
BstDEI	CTNAG	8 cut(s)	27, 36, 369, 807, 1157, 1417, 1609, 1685
BstDSI	CCRYGG	1 cut(s)	1244
BstF5I	GGATG	3 cut(s)	428, 1012, 1554
BstHHI	GCGC	1 cut(s)	942
BstKTI	GATC	7 cut(s)	48, 256, 910, 1203, 1438, 1476, 1603
BstMAI	GTCTC	3 cut(s)	669, 1166, 1350
BstMBI	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
BstMWI	GCNNNNNNNGC	5 cut(s)	425, 692, 995, 1077, 1561
BstNSI	RCATGY	1 cut(s)	1147
BstSFI	CTRYAG	2 cut(s)	355, 693
BstSLI	GKGCMC	1 cut(s)	1217
BstV1I	GCAGC	3 cut(s)	679, 1593, 1628
BstX2I	RGATCY	2 cut(s)	1200, 1473
BstYI	RGATCY	2 cut(s)	1200, 1473
BsuRI	GGCC	3 cut(s)	575, 1088, 1215
BtgI	CCRYGG	1 cut(s)	1244
BtsCI	GGATG	3 cut(s)	428, 1012, 1554
BtsI	GCAGTG	1 cut(s)	1036
BtsIMutI	CAGTG	7 cut(s)	264, 723, 739, 917, 1036, 1596, 1635
Cac8I	GCNNGC	4 cut(s)	363, 991, 1320, 1682
CaiI	CAGNNNCTG	2 cut(s)	692, 1637
CciI	TCATGA	1 cut(s)	973
CfoI	GCGC	1 cut(s)	942
Cfr13I	GGNCC	5 cut(s)	788, 833, 934, 1213, 1214
DdeI	CTNAG	8 cut(s)	27, 36, 369, 807, 1157, 1417, 1609, 1685
DpnI	GATC	7 cut(s)	47, 255, 909, 1202, 1437, 1475, 1602
DpnII	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
DraI	TTTAAA	1 cut(s)	1305
EaeI	YGGCCR	1 cut(s)	1086
Eco130I	CCWWGG	3 cut(s)	432, 1083, 1244
Eco24I	GRGCYC	1 cut(s)	1217
Eco31I	GGTCTC	2 cut(s)	669, 1350
Eco32I	GATATC	1 cut(s)	288
Eco47I	GGWCC	3 cut(s)	788, 833, 934
Eco57I	CTGAAG	3 cut(s)	126, 941, 1308
Eco88I	CYCGRG	1 cut(s)	1210
EcoO109I	RGGNCCY	4 cut(s)	788, 833, 934, 1214
EcoRV	GATATC	1 cut(s)	288
EcoT14I	CCWWGG	3 cut(s)	432, 1083, 1244
EcoT38I	GRGCYC	1 cut(s)	1217
ErhI	CCWWGG	3 cut(s)	432, 1083, 1244
FaqI	GGGAC	5 cut(s)	423, 525, 975, 1034, 1342
FauI	CCCGC	1 cut(s)	709
FbaI	TGATCA	1 cut(s)	1600
Fnu4HI	GCNGC	5 cut(s)	420, 693, 1556, 1582, 1617
FokI	GGATG	3 cut(s)	415, 1019, 1561
FriOI	GRGCYC	1 cut(s)	1217
Fsp4HI	GCNGC	5 cut(s)	420, 693, 1556, 1582, 1617
FspBI	CTAG	6 cut(s)	56, 198, 323, 990, 1026, 1311
GlaI	GCGC	1 cut(s)	941
GluI	GCNGC	5 cut(s)	420, 693, 1556, 1582, 1617
GsuI	CTGGAG	3 cut(s)	261, 408, 1517
HaeIII	GGCC	3 cut(s)	575, 1088, 1215
HapII	CCGG	3 cut(s)	218, 1119, 1360
HhaI	GCGC	1 cut(s)	942
Hin6I	GCGC	1 cut(s)	940
HinP1I	GCGC	1 cut(s)	940
HincII	GTYRAC	2 cut(s)	249, 1423
HindII	GTYRAC	2 cut(s)	249, 1423
HindIII	AAGCTT	1 cut(s)	1298
HinfI	GANTC	9 cut(s)	50, 83, 146, 221, 763, 1036, 1159, 1408, 1627
HpaII	CCGG	3 cut(s)	218, 1119, 1360
HphI	GGTGA	3 cut(s)	1277, 1466, 1652
Hpy166II	GTNNAC	4 cut(s)	249, 767, 1423, 1664
Hpy188I	TCNGA	9 cut(s)	71, 145, 292, 300, 370, 451, 1006, 1041, 1158
Hpy188III	TCNNGA	6 cut(s)	56, 218, 441, 974, 1477, 1496
Hpy8I	GTNNAC	4 cut(s)	249, 767, 1423, 1664
HpyAV	CCTTC	8 cut(s)	281, 379, 460, 632, 742, 752, 1454, 1503
HpyCH4III	ACNGT	7 cut(s)	75, 516, 562, 616, 743, 895, 1661
HpyCH4IV	ACGT	1 cut(s)	1666
HpyF10VI	GCNNNNNNNGC	5 cut(s)	425, 692, 995, 1077, 1561
HpyF3I	CTNAG	8 cut(s)	27, 36, 369, 807, 1157, 1417, 1609, 1685
HpySE526I	ACGT	1 cut(s)	1666
HspAI	GCGC	1 cut(s)	940
Kpn2I	TCCGGA	1 cut(s)	217
Ksp22I	TGATCA	1 cut(s)	1600
Kzo9I	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
LmnI	GCTCC	4 cut(s)	427, 823, 1085, 1569
Lsp1109I	GCAGC	3 cut(s)	679, 1593, 1628
LweI	GCATC	4 cut(s)	350, 374, 437, 835
MaeI	CTAG	6 cut(s)	56, 198, 323, 990, 1026, 1311
MaeII	ACGT	1 cut(s)	1666
MaeIII	GTNAC	1 cut(s)	1633
MalI	GATC	7 cut(s)	47, 255, 909, 1202, 1437, 1475, 1602
MbiI	CCGCTC	1 cut(s)	67
MboI	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
MboII	GAAGA	4 cut(s)	647, 648, 1139, 1636
MflI	RGATCY	2 cut(s)	1200, 1473
MhlI	GDGCHC	2 cut(s)	375, 1217
MlsI	TGGCCA	1 cut(s)	1088
MluNI	TGGCCA	1 cut(s)	1088
MlyI	GAGTC	4 cut(s)	44, 215, 772, 1168
MmeI	TCCRAC	2 cut(s)	725, 834
Mox20I	TGGCCA	1 cut(s)	1088
MroI	TCCGGA	1 cut(s)	217
MroXI	GAANNNNTTC	1 cut(s)	552
MscI	TGGCCA	1 cut(s)	1088
MseI	TTAA	5 cut(s)	777, 930, 1304, 1347, 1523
MslI	CAYNNNNRTG	3 cut(s)	10, 922, 1146
Msp20I	TGGCCA	1 cut(s)	1088
MspA1I	CMGCKG	2 cut(s)	419, 998
MspI	CCGG	3 cut(s)	218, 1119, 1360
Mva1269I	GAATGC	3 cut(s)	17, 1222, 1392
MwoI	GCNNNNNNNGC	5 cut(s)	425, 692, 995, 1077, 1561
NcoI	CCATGG	1 cut(s)	1244
NdeII	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
NheI	GCTAGC	1 cut(s)	989
NlaIV	GGNNCC	5 cut(s)	423, 789, 834, 1202, 1215
NmeAIII	GCCGAG	1 cut(s)	557
NmuCI	GTSAC	1 cut(s)	1633
NspI	RCATGY	1 cut(s)	1147
NspV	TTCGAA	2 cut(s)	233, 556
OliI	CACNNNNGTG	1 cut(s)	922
PagI	TCATGA	1 cut(s)	973
PciI	ACATGT	1 cut(s)	1143
PctI	GAATGC	3 cut(s)	17, 1222, 1392
PdmI	GAANNNNTTC	1 cut(s)	552
PfeI	GAWTC	5 cut(s)	83, 146, 1036, 1408, 1627
PflMI	CCANNNNNTGG	1 cut(s)	1637
PkrI	GCNGC	5 cut(s)	421, 694, 1557, 1583, 1618
PleI	GAGTC	4 cut(s)	44, 215, 771, 1167
PpsI	GAGTC	4 cut(s)	44, 215, 771, 1167
PpuMI	RGGWCCY	3 cut(s)	788, 833, 934
PscI	ACATGT	1 cut(s)	1143
Psp5II	RGGWCCY	3 cut(s)	788, 833, 934
PspN4I	GGNNCC	5 cut(s)	423, 789, 834, 1202, 1215
PspOMI	GGGCCC	1 cut(s)	1213
PspPI	GGNCC	5 cut(s)	788, 833, 934, 1213, 1214
PspPPI	RGGWCCY	3 cut(s)	788, 833, 934
PstI	CTGCAG	1 cut(s)	697
PstNI	CAGNNNCTG	2 cut(s)	692, 1637
PsuI	RGATCY	2 cut(s)	1200, 1473
PvuII	CAGCTG	1 cut(s)	998
RseI	CAYNNNNRTG	3 cut(s)	10, 922, 1146
SaqAI	TTAA	5 cut(s)	777, 930, 1304, 1347, 1523
SatI	GCNGC	5 cut(s)	420, 693, 1556, 1582, 1617
Sau3AI	GATC	7 cut(s)	45, 253, 907, 1200, 1435, 1473, 1600
Sau96I	GGNCC	5 cut(s)	788, 833, 934, 1213, 1214
SchI	GAGTC	4 cut(s)	44, 215, 772, 1168
SduI	GDGCHC	2 cut(s)	375, 1217
SfaNI	GCATC	4 cut(s)	350, 374, 437, 835
SfcI	CTRYAG	2 cut(s)	355, 693
SfuI	TTCGAA	2 cut(s)	233, 556
SinI	GGWCC	3 cut(s)	788, 833, 934
SmiMI	CAYNNNNRTG	3 cut(s)	10, 922, 1146
SmlI	CTYRAG	1 cut(s)	1169
SmoI	CTYRAG	1 cut(s)	1169
SsiI	CCGC	4 cut(s)	65, 419, 716, 1555
SspI	AATATT	1 cut(s)	1184
SspMI	CTAG	6 cut(s)	56, 198, 323, 990, 1026, 1311
StyI	CCWWGG	3 cut(s)	432, 1083, 1244
TaaI	ACNGT	7 cut(s)	75, 516, 562, 616, 743, 895, 1661
TaiI	ACGT	1 cut(s)	1669
TaqI	TCGA	6 cut(s)	48, 233, 344, 480, 556, 910
TaqII	GACCGA	1 cut(s)	246
TauI	GCSGC	2 cut(s)	422, 1558
TfiI	GAWTC	5 cut(s)	83, 146, 1036, 1408, 1627
Tru1I	TTAA	5 cut(s)	777, 930, 1304, 1347, 1523
Tru9I	TTAA	5 cut(s)	777, 930, 1304, 1347, 1523
TscAI	CASTG	7 cut(s)	271, 730, 746, 924, 1036, 1603, 1642
TseFI	GTSAC	1 cut(s)	1633
TseI	GCWGC	3 cut(s)	692, 1581, 1616
Tsp45I	GTSAC	1 cut(s)	1633
TspDTI	ATGAA	7 cut(s)	86, 138, 324, 1043, 1164, 1194, 1329
TspGWI	ACGGA	1 cut(s)	671
TspRI	CASTG	7 cut(s)	271, 730, 746, 924, 1036, 1603, 1642
Van91I	CCANNNNNTGG	1 cut(s)	1637
VpaK11BI	GGWCC	3 cut(s)	788, 833, 934
XapI	RAATTY	5 cut(s)	40, 118, 294, 528, 1152
XbaI	TCTAGA	1 cut(s)	55
XceI	RCATGY	1 cut(s)	1147
XmnI	GAANNNNTTC	1 cut(s)	552
XspI	CTAG	6 cut(s)	56, 198, 323, 990, 1026, 1311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.