Rorug06G0442600

Rare lipoprotein A (RlpA)-like double-psi beta-barrel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0003982
Physical Location & Seq
Reverse (-)
57451547 .. 57454809
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0442600.1

Sequence Viewer

Length: 1983 bp
ATGGAAGGTCTGCCGCAGGTGGAGGTGTCTGAAATCCACAACAACAACAAGGCGGCCGTCCTTGCCTACCCCGCCGGGGCTGCACAAGTTAATGCACAGTCTTTCCTACAACTCGCCATGTACCCTATTACTCTAAAGTTTGAGGAGGTGTTTTACAAAGTGAAAATGGAGCACAACGCTGGATTAGTACCGTGGCCGAGTAGTAGTAACAGGTCATCGTCTGAGAAAAGCATACTAAACGGAATATCAGGTGTGGTTTGCCCCGGAGAGATACTAGCCATGCTAGGTCCCTCCGGTAGTGGCAAAACAACTCTTCTCACAGCTCTCGGCGGCCGCCTCCACGGCAAGCTCTCCGGCAAAATCACCTACAACTCCCAGCCATTCTGCGGCTCCATCAAACGGAGAACCGGATTCGTCGCACAGGAGGACGTACTGTACCCTCACCTCACCGTAACCGAGACTCTCGTCTTCACCGCCCTGCTGCGGCTGCCCAACACCCTGACACGCGACGAGAAAGTGCAGCACGTAGAGCAAGTGATCAGCGAGCTCGGGCTGACCCGGTGCCGGAGCAGCATGATCGGGGGCCCCCTGTTTAGGGGAATATCTGGTGGAGAGAAGAAGAGGGTTAGTATTGGACAAGAGATGCTGATTAATCCAAGCTTGCTTTTGCTGGACGAGCCCACCTCGGGTTTGGACTCCACTACGGCTCAAAGAATTTTGACCACGGTGAAGAGGCTTGCAGGTGGGGGTCGGACCGTTGTCACCACAATCCATCAGCCCTCGAGCCGCCTCTACCACATGTTTGATAAACTGGTCTTGCTTTCCGAGGGCTACCCCATTTACTATGGCCCTGCTTCTGCTGCCCTCGAGTATTTTTCCTCTATTGGTTTCTCCACGTCCTTGCCTTATGTCAATCCAGCTGATCTCTTGCTCGATCTTGCTAACGGAATCGCCCCTGATTCGAAACCTGCCTCCGATCATCAACAACGTGAGAACATGGAACAGGATCAAAAGATGGTGAGAAAAGATCTCGTTTCGGCCTACGACAAAAACATTTACACAAGATTGAAAGCTGAGCTCTGTGGTGGTGGTTTGGAGGTCAACAATGTCTTCAATAATTACATCAAAGAAGCTGCTTCTTCAAGACACGATCAACATCATGAACATTTTTGGTGTACAAGCTGGTGGCACCAGTTCAAGGTACTACTCCAGAGGGGACTAAGGGAACGAAGGTACGAAGCATTCAACAGGCTAAGAATTTTCCAAGTCCTAAGCGTCGCCACGCTCGGTGGACTCCTCTGGTGGCACACCCCTTCTTCCCATATCGAAGATCGAATTGCCTTGCTCTTCTTCTTCTCCGTCTTCTGGGGATTCTACCCCCTCTACAATGCAGTCTTTACATTCCCCCAAGAAAGAAGAATGCTAATAAAAGAAAGATCTTCCGGAATGTACCGCCTCTCGTCATATTTTCTGGCCAGAACAGTGGGTGATCTACCACTCGAGCTTGCACTCCCCACCGCATTTGTGCTGATAATCTACTGGATGGGTGGACTCAAACCCGACCCGTTCACCTTCATCCTTTCTCTTCTCGTTGTTCTCTACAACGTCCTCGTCTCCCAGAGCCTCGGGTTGGCTATCGGCGCCATTCTCATGGACATAAAGCAAGCCACCACTTTGGCTTCGGTTACGACACTTGTTTTCCTCATCGCCGGAGGCTACTACATTCAACAGATTCCTCCGTTCATAGTGTGGCTAAAGTACTTGAGCTATAGCTTCTACTGCTACAAGCTTCTTCTCGGGGTTCAATACCGGGAAGACGATTACTACGAGTGCTCGAAAGGTGTCTTGTGCCGAGTTGGAGACTTGCCTGCCGTCAAGTCAATGGGAGATCTTAACAACTTGTGGATAGAGGTCTCCATTCTCGCCCTGATGTTACTAGGTTACCGACTTATTGCTTATCTCGCTTTGCATCGAGTTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005618 GO:0005623 GO:0016020 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DPBB_1 Pollen_allerg_1

Protein Analysis

660

Amino Acids

73.97

Weight (kDa)

8.9

Isoelectric Point (pI)

45.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 79 - 229 2.7e-26 ABC transporter
ABC2_membrane_7 PF19055 258 - 656 7.8e-12 ABC-2 type transporter
ABC2_membrane PF01061 397 - 603 2.3e-43 ABC-2 type transporter
ABC2_membrane_3 PF12698 448 - 654 7.8e-10 ABC-2 family transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 7, 731
Acc36I ACCTGC 3 cut(s) 7, 731, 976
AccB1I GGYRCC 3 cut(s) 561, 1188, 1640
AccII CGCG 1 cut(s) 507
AccIII TCCGGA 1 cut(s) 1442
AclWI GGATC 1 cut(s) 1014
AcoI YGGCCR 4 cut(s) 54, 194, 331, 1473
AcsI RAATTY 2 cut(s) 714, 1257
AcyI GRCGYC 1 cut(s) 1641
AfaI GTAC 9 cut(s) 122, 189, 432, 437, 1177, 1203, 1235, 1451, 1760
AflIII ACRYGT 1 cut(s) 798
AgsI TTSAA 7 cut(s) 1069, 1114, 1143, 1198, 1246, 1727, 1805
AjiI CACGTC 1 cut(s) 897
Alw21I GWGCWC 4 cut(s) 174, 549, 1080, 1835
Alw26I GTCTC 4 cut(s) 452, 1618, 1854, 1918
AlwI GGATC 1 cut(s) 1014
Ama87I CYCGRG 7 cut(s) 548, 685, 781, 866, 1499, 1625, 1796
Aor13HI TCCGGA 1 cut(s) 1442
AoxI GGCC 7 cut(s) 54, 194, 331, 583, 847, 1038, 1473
ApaI GGGCCC 1 cut(s) 587
ApeKI GCWGC 7 cut(s) 80, 481, 487, 520, 570, 860, 1133
ApoI RAATTY 2 cut(s) 714, 1257
AseI ATTAAT 1 cut(s) 651
AspLEI GCGC 1 cut(s) 1643
AspS9I GGNCC 5 cut(s) 287, 583, 584, 753, 848
AsuC2I CCSGG 4 cut(s) 76, 264, 559, 1811
AsuHPI GGTGA 9 cut(s) 355, 434, 439, 463, 739, 754, 1030, 1499, 1561
AsuII TTCGAA 1 cut(s) 962
AvaI CYCGRG 7 cut(s) 548, 685, 781, 866, 1499, 1625, 1796
AvaII GGWCC 2 cut(s) 287, 753
BaeGI GKGCMC 1 cut(s) 587
BalI TGGCCA 1 cut(s) 1475
BanI GGYRCC 3 cut(s) 561, 1188, 1640
BanII GRGCYC 4 cut(s) 549, 587, 681, 1080
BbsI GAAGAC 4 cut(s) 460, 1102, 1354, 1821
Bbv12I GWGCWC 4 cut(s) 174, 549, 1080, 1835
BbvI GCAGC 7 cut(s) 67, 468, 474, 532, 582, 847, 1120
BccI CCATC 4 cut(s) 401, 780, 1009, 1537
BceAI ACGGC 4 cut(s) 41, 358, 720, 1856
BcgI CGANNNNNNTGC 3 cut(s) 559, 593, 1958
BclI TGATCA 1 cut(s) 537
BcnI CCSGG 4 cut(s) 76, 264, 559, 1811
BcoDI GTCTC 4 cut(s) 452, 1618, 1854, 1918
BfaI CTAG 4 cut(s) 275, 284, 1937, 1981
BfmI CTRYAG 1 cut(s) 1768
BfoI RGCGCY 1 cut(s) 1644
BfuAI ACCTGC 3 cut(s) 7, 731, 976
BglI GCCNNNNNGGC 1 cut(s) 342
BglII AGATCT 3 cut(s) 1027, 1436, 1888
BlpI GCTNAGC 1 cut(s) 1074
BmcAI AGTACT 1 cut(s) 1760
Bme1390I CCNGG 4 cut(s) 76, 264, 559, 1811
Bme18I GGWCC 2 cut(s) 287, 753
BmeT110I CYCGRG 7 cut(s) 548, 685, 781, 866, 1499, 1625, 1796
BmgBI CACGTC 1 cut(s) 897
BmgT120I GGNCC 5 cut(s) 287, 583, 584, 753, 848
BmiI GGNNCC 8 cut(s) 289, 391, 563, 584, 585, 586, 1190, 1642
BmrFI CCNGG 4 cut(s) 76, 264, 559, 1811
BmsI GCATC 2 cut(s) 633, 1978
BoxI GACNNNNGTC 2 cut(s) 464, 758
BpiI GAAGAC 4 cut(s) 460, 1102, 1354, 1821
BplI GAGNNNNNCTC 2 cut(s) 668, 700
BpmI CTGGAG 1 cut(s) 1193
Bpu10I CCTNAGC 1 cut(s) 1271
Bpu1102I GCTNAGC 1 cut(s) 1074
Bpu14I TTCGAA 1 cut(s) 962
BpuEI CTTGAG 1 cut(s) 1783
BpuMI CCSGG 4 cut(s) 76, 264, 559, 1811
BsaAI YACGTR 1 cut(s) 526
BsaBI GATNNNNATC 1 cut(s) 1155
BsaHI GRCGYC 1 cut(s) 1641
BsaI GGTCTC 1 cut(s) 1918
BsaJI CCNNGG 8 cut(s) 75, 191, 262, 340, 684, 723, 825, 1624
BsaWI WCCGGW 3 cut(s) 293, 407, 1442
Bse1I ACTGG 3 cut(s) 816, 1192, 1544
Bse8I GATNNNNATC 1 cut(s) 1155
BseAI TCCGGA 1 cut(s) 1442
BseDI CCNNGG 8 cut(s) 75, 191, 262, 340, 684, 723, 825, 1624
BseGI GGATG 2 cut(s) 1548, 1575
BseJI GATNNNNATC 1 cut(s) 1155
BseMII CTCAG 2 cut(s) 213, 1065
BseNI ACTGG 3 cut(s) 816, 1192, 1544
BseRI GAGGAG 2 cut(s) 158, 1286
BseSI GKGCMC 1 cut(s) 587
BseX3I CGGCCG 2 cut(s) 54, 331
BseXI GCAGC 7 cut(s) 67, 468, 474, 532, 582, 847, 1120
BseYI CCCAGC 1 cut(s) 375
BsgI GTGCAG 2 cut(s) 66, 539
Bsh1236I CGCG 1 cut(s) 507
Bsh1285I CGRYCG 2 cut(s) 57, 334
BshFI GGCC 7 cut(s) 56, 196, 333, 585, 849, 1040, 1475
BshNI GGYRCC 3 cut(s) 561, 1188, 1640
BsiEI CGRYCG 2 cut(s) 57, 334
BsiHKAI GWGCWC 4 cut(s) 174, 549, 1080, 1835
BsiHKCI CYCGRG 7 cut(s) 548, 685, 781, 866, 1499, 1625, 1796
BslFI GGGAC 2 cut(s) 273, 1230
BsmAI GTCTC 4 cut(s) 452, 1618, 1854, 1918
BsmBI CGTCTC 1 cut(s) 1618
BsmFI GGGAC 2 cut(s) 273, 1230
BsmI GAATGC 2 cut(s) 1241, 1425
BsnI GGCC 7 cut(s) 56, 196, 333, 585, 849, 1040, 1475
Bso31I GGTCTC 1 cut(s) 1918
BsoBI CYCGRG 7 cut(s) 548, 685, 781, 866, 1499, 1625, 1796
Bsp119I TTCGAA 1 cut(s) 962
Bsp120I GGGCCC 1 cut(s) 583
Bsp1286I GDGCHC 6 cut(s) 174, 549, 587, 681, 1080, 1835
Bsp13I TCCGGA 1 cut(s) 1442
Bsp1407I TGTACA 1 cut(s) 1175
Bsp1720I GCTNAGC 1 cut(s) 1074
BspANI GGCC 7 cut(s) 56, 196, 333, 585, 849, 1040, 1475
BspCNI CTCAG 2 cut(s) 214, 1066
BspEI TCCGGA 1 cut(s) 1442
BspFNI CGCG 1 cut(s) 507
BspHI TCATGA 1 cut(s) 1159
BspLI GGNNCC 8 cut(s) 289, 391, 563, 584, 585, 586, 1190, 1642
BspMI ACCTGC 3 cut(s) 7, 731, 976
BspPI GGATC 1 cut(s) 1014
BspQI GCTCTTC 1 cut(s) 1352
BspT104I TTCGAA 1 cut(s) 962
BspT107I GGYRCC 3 cut(s) 561, 1188, 1640
BspTNI GGTCTC 1 cut(s) 1918
BsrGI TGTACA 1 cut(s) 1175
BsrI ACTGG 3 cut(s) 816, 1192, 1544
BssECI CCNNGG 8 cut(s) 75, 191, 262, 340, 684, 723, 825, 1624
BssNI GRCGYC 1 cut(s) 1641
Bst4CI ACNGT 7 cut(s) 99, 192, 435, 451, 727, 757, 1483
Bst6I CTCTTC 5 cut(s) 318, 614, 725, 1352, 1590
BstACI GRCGYC 1 cut(s) 1641
BstAUI TGTACA 1 cut(s) 1175
BstBAI YACGTR 1 cut(s) 526
BstBI TTCGAA 1 cut(s) 962
BstC8I GCNNGC 7 cut(s) 347, 545, 662, 738, 1506, 1665, 1869
BstDEI CTNAG 5 cut(s) 222, 1074, 1220, 1253, 1271
BstDSI CCRYGG 3 cut(s) 191, 340, 723
BstEII GGTNACC 1 cut(s) 1940
BstF5I GGATG 2 cut(s) 1548, 1575
BstFNI CGCG 1 cut(s) 507
BstH2I RGCGCY 1 cut(s) 1644
BstHHI GCGC 1 cut(s) 1643
BstMAI GTCTC 4 cut(s) 452, 1618, 1854, 1918
BstMCI CGRYCG 2 cut(s) 57, 334
BstNSI RCATGY 1 cut(s) 802
BstPAI GACNNNNGTC 2 cut(s) 464, 758
BstPI GGTNACC 1 cut(s) 1940
BstSCI CCNGG 4 cut(s) 74, 262, 557, 1809
BstSFI CTRYAG 1 cut(s) 1768
BstSLI GKGCMC 1 cut(s) 587
BstUI CGCG 1 cut(s) 507
BstV1I GCAGC 7 cut(s) 67, 468, 474, 532, 582, 847, 1120
BstV2I GAAGAC 4 cut(s) 460, 1102, 1354, 1821
BstX2I RGATCY 3 cut(s) 1027, 1436, 1888
BstXI CCANNNNNNTGG 3 cut(s) 1483, 1651, 1675
BstYI RGATCY 3 cut(s) 1027, 1436, 1888
BstZI CGGCCG 2 cut(s) 54, 331
BsuRI GGCC 7 cut(s) 56, 196, 333, 585, 849, 1040, 1475
BtgI CCRYGG 3 cut(s) 191, 340, 723
BtgZI GCGATG 1 cut(s) 1690
BtrI CACGTC 1 cut(s) 897
BtsCI GGATG 2 cut(s) 1548, 1575
BtsIMutI CAGTG 1 cut(s) 1488
BveI ACCTGC 3 cut(s) 7, 731, 976
Cac8I GCNNGC 7 cut(s) 347, 545, 662, 738, 1506, 1665, 1869
CciI TCATGA 1 cut(s) 1159
CciNI GCGGCCGC 1 cut(s) 331
CfoI GCGC 1 cut(s) 1643
Cfr13I GGNCC 5 cut(s) 287, 583, 584, 753, 848
CpoI CGGWCCG 1 cut(s) 753
CseI GACGC 1 cut(s) 1264
Csp6I GTAC 9 cut(s) 121, 188, 431, 436, 1176, 1202, 1234, 1450, 1759
CspCI CAANNNNNGTGG 2 cut(s) 1504, 1539
CspI CGGWCCG 1 cut(s) 753
CviAII CATG 7 cut(s) 118, 280, 574, 799, 997, 1160, 1651
CviQI GTAC 9 cut(s) 121, 188, 431, 436, 1176, 1202, 1234, 1450, 1759
DdeI CTNAG 5 cut(s) 222, 1074, 1220, 1253, 1271
DinI GGCGCC 1 cut(s) 1642
EaeI YGGCCR 4 cut(s) 54, 194, 331, 1473
EagI CGGCCG 2 cut(s) 54, 331
Eam1104I CTCTTC 5 cut(s) 318, 614, 725, 1352, 1590
EarI CTCTTC 5 cut(s) 318, 614, 725, 1352, 1590
Ecl136II GAGCTC 2 cut(s) 547, 1078
EclXI CGGCCG 2 cut(s) 54, 331
Eco24I GRGCYC 4 cut(s) 549, 587, 681, 1080
Eco31I GGTCTC 1 cut(s) 1918
Eco47I GGWCC 2 cut(s) 287, 753
Eco52I CGGCCG 2 cut(s) 54, 331
Eco53kI GAGCTC 2 cut(s) 547, 1078
Eco88I CYCGRG 7 cut(s) 548, 685, 781, 866, 1499, 1625, 1796
Eco91I GGTNACC 1 cut(s) 1940
EcoICRI GAGCTC 2 cut(s) 547, 1078
EcoO109I RGGNCCY 3 cut(s) 287, 583, 584
EcoO65I GGTNACC 1 cut(s) 1940
EcoT38I GRGCYC 4 cut(s) 549, 587, 681, 1080
EgeI GGCGCC 1 cut(s) 1642
EheI GGCGCC 1 cut(s) 1642
Esp3I CGTCTC 1 cut(s) 1618
FaeI CATG 7 cut(s) 121, 283, 577, 802, 1000, 1163, 1654
FaqI GGGAC 2 cut(s) 273, 1230
FatI CATG 7 cut(s) 117, 279, 573, 798, 996, 1159, 1650
FauI CCCGC 1 cut(s) 79
FbaI TGATCA 1 cut(s) 537
FokI GGATG 2 cut(s) 1555, 1562
FriOI GRGCYC 4 cut(s) 549, 587, 681, 1080
FspBI CTAG 4 cut(s) 275, 284, 1937, 1981
GlaI GCGC 1 cut(s) 1642
GsaI CCCAGC 1 cut(s) 379
GsuI CTGGAG 1 cut(s) 1193
HaeII RGCGCY 1 cut(s) 1644
HaeIII GGCC 7 cut(s) 56, 196, 333, 585, 849, 1040, 1475
HgaI GACGC 1 cut(s) 1264
HhaI GCGC 1 cut(s) 1643
Hin1I GRCGYC 1 cut(s) 1641
Hin1II CATG 7 cut(s) 121, 283, 577, 802, 1000, 1163, 1654
Hin6I GCGC 1 cut(s) 1641
HinP1I GCGC 1 cut(s) 1641
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HindIII AAGCTT 2 cut(s) 658, 1787
HinfI GANTC 9 cut(s) 411, 460, 695, 948, 959, 1293, 1371, 1551, 1732
HphI GGTGA 9 cut(s) 355, 434, 439, 463, 739, 754, 1030, 1499, 1561
Hpy166II GTNNAC 5 cut(s) 1102, 1176, 1292, 1550, 1569
Hpy188I TCNGA 5 cut(s) 31, 223, 753, 826, 976
Hpy188III TCNNGA 4 cut(s) 1143, 1160, 1210, 1443
Hpy8I GTNNAC 5 cut(s) 1102, 1176, 1292, 1550, 1569
Hpy99I CGWCG 3 cut(s) 419, 512, 1280
HpyAV CCTTC 3 cut(s) 1224, 1323, 1582
HpyCH4III ACNGT 7 cut(s) 99, 192, 435, 451, 727, 757, 1483
HpyCH4IV ACGT 5 cut(s) 429, 525, 896, 988, 1605
HpyCH4V TGCA 7 cut(s) 83, 95, 520, 740, 1391, 1508, 1969
HpyF3I CTNAG 5 cut(s) 222, 1074, 1220, 1253, 1271
HpySE526I ACGT 5 cut(s) 429, 525, 896, 988, 1605
Hsp92I GRCGYC 1 cut(s) 1641
Hsp92II CATG 7 cut(s) 121, 283, 577, 802, 1000, 1163, 1654
HspAI GCGC 1 cut(s) 1641
KasI GGCGCC 1 cut(s) 1640
Kpn2I TCCGGA 1 cut(s) 1442
Ksp22I TGATCA 1 cut(s) 537
LguI GCTCTTC 1 cut(s) 1352
LmnI GCTCC 3 cut(s) 169, 395, 567
Lsp1109I GCAGC 7 cut(s) 67, 468, 474, 532, 582, 847, 1120
LweI GCATC 2 cut(s) 633, 1978
MaeI CTAG 4 cut(s) 275, 284, 1937, 1981
MaeII ACGT 5 cut(s) 429, 525, 896, 988, 1605
MaeIII GTNAC 6 cut(s) 206, 451, 760, 1684, 1932, 1940
MflI RGATCY 3 cut(s) 1027, 1436, 1888
MhlI GDGCHC 6 cut(s) 174, 549, 587, 681, 1080, 1835
MlsI TGGCCA 1 cut(s) 1475
MluCI AATT 4 cut(s) 714, 1117, 1257, 1335
MluNI TGGCCA 1 cut(s) 1475
Mly113I GGCGCC 1 cut(s) 1641
MlyI GAGTC 4 cut(s) 454, 689, 1287, 1545
MmeI TCCRAC 2 cut(s) 731, 1837
Mox20I TGGCCA 1 cut(s) 1475
MroI TCCGGA 1 cut(s) 1442
MscI TGGCCA 1 cut(s) 1475
MseI TTAA 3 cut(s) 90, 651, 1893
MslI CAYNNNNRTG 1 cut(s) 1649
Msp20I TGGCCA 1 cut(s) 1475
MspA1I CMGCKG 1 cut(s) 920
MspR9I CCNGG 4 cut(s) 76, 264, 559, 1811
Mva1269I GAATGC 2 cut(s) 1241, 1425
MvnI CGCG 1 cut(s) 507
NarI GGCGCC 1 cut(s) 1641
NciI CCSGG 4 cut(s) 76, 264, 559, 1811
NlaIII CATG 7 cut(s) 121, 283, 577, 802, 1000, 1163, 1654
NlaIV GGNNCC 8 cut(s) 289, 391, 563, 584, 585, 586, 1190, 1642
NmeAIII GCCGAG 3 cut(s) 222, 306, 1877
NmuCI GTSAC 1 cut(s) 760
NotI GCGGCCGC 1 cut(s) 331
NspI RCATGY 1 cut(s) 802
NspV TTCGAA 1 cut(s) 962
PaeR7I CTCGAG 3 cut(s) 781, 866, 1499
PagI TCATGA 1 cut(s) 1159
PaqCI CACCTGC 2 cut(s) 7, 731
PciI ACATGT 1 cut(s) 798
PciSI GCTCTTC 1 cut(s) 1352
PcsI WCGNNNNNNNCGW 1 cut(s) 1824
PctI GAATGC 2 cut(s) 1241, 1425
PfeI GAWTC 5 cut(s) 411, 948, 959, 1371, 1732
PleI GAGTC 4 cut(s) 454, 689, 1287, 1545
PluTI GGCGCC 1 cut(s) 1644
PpsI GAGTC 4 cut(s) 454, 689, 1287, 1545
Ppu21I YACGTR 1 cut(s) 526
PpuMI RGGWCCY 1 cut(s) 287
PscI ACATGT 1 cut(s) 798
PshAI GACNNNNGTC 2 cut(s) 464, 758
PshBI ATTAAT 1 cut(s) 651
Psp124BI GAGCTC 2 cut(s) 549, 1080
Psp5II RGGWCCY 1 cut(s) 287
PspEI GGTNACC 1 cut(s) 1940
PspFI CCCAGC 1 cut(s) 375
PspN4I GGNNCC 8 cut(s) 289, 391, 563, 584, 585, 586, 1190, 1642
PspOMI GGGCCC 1 cut(s) 583
PspPI GGNCC 5 cut(s) 287, 583, 584, 753, 848
PspPPI RGGWCCY 1 cut(s) 287
PspXI VCTCGAGB 3 cut(s) 781, 866, 1499
PsuI RGATCY 3 cut(s) 1027, 1436, 1888
PvuII CAGCTG 1 cut(s) 920
RsaI GTAC 9 cut(s) 122, 189, 432, 437, 1177, 1203, 1235, 1451, 1760
RsaNI GTAC 9 cut(s) 121, 188, 431, 436, 1176, 1202, 1234, 1450, 1759
RseI CAYNNNNRTG 1 cut(s) 1649
Rsr2I CGGWCCG 1 cut(s) 753
RsrII CGGWCCG 1 cut(s) 753
SacI GAGCTC 2 cut(s) 549, 1080
SapI GCTCTTC 1 cut(s) 1352
SaqAI TTAA 3 cut(s) 90, 651, 1893
Sau96I GGNCC 5 cut(s) 287, 583, 584, 753, 848
ScaI AGTACT 1 cut(s) 1760
SchI GAGTC 4 cut(s) 454, 689, 1287, 1545
ScrFI CCNGG 4 cut(s) 76, 264, 559, 1811
SduI GDGCHC 6 cut(s) 174, 549, 587, 681, 1080, 1835
SfaNI GCATC 2 cut(s) 633, 1978
SfcI CTRYAG 1 cut(s) 1768
SfoI GGCGCC 1 cut(s) 1642
Sfr274I CTCGAG 3 cut(s) 781, 866, 1499
SfuI TTCGAA 1 cut(s) 962
SinI GGWCC 2 cut(s) 287, 753
SlaI CTCGAG 3 cut(s) 781, 866, 1499
SmiMI CAYNNNNRTG 1 cut(s) 1649
SmlI CTYRAG 4 cut(s) 781, 866, 1499, 1762
SmoI CTYRAG 4 cut(s) 781, 866, 1499, 1762
Sse9I AATT 4 cut(s) 714, 1117, 1257, 1335
SspDI GGCGCC 1 cut(s) 1640
SspMI CTAG 4 cut(s) 275, 284, 1937, 1981
SstI GAGCTC 2 cut(s) 549, 1080
StyD4I CCNGG 4 cut(s) 74, 262, 557, 1809
TaaI ACNGT 7 cut(s) 99, 192, 435, 451, 727, 757, 1483
TaiI ACGT 5 cut(s) 432, 528, 899, 991, 1608
TaqI TCGA 9 cut(s) 782, 867, 933, 962, 1326, 1333, 1500, 1835, 1972
TasI AATT 4 cut(s) 714, 1117, 1257, 1335
TatI WGTACW 2 cut(s) 1175, 1758
TauI GCSGC 7 cut(s) 16, 56, 333, 336, 390, 487, 789
TfiI GAWTC 5 cut(s) 411, 948, 959, 1371, 1732
Tru1I TTAA 3 cut(s) 90, 651, 1893
Tru9I TTAA 3 cut(s) 90, 651, 1893
TscAI CASTG 1 cut(s) 1488
TseFI GTSAC 1 cut(s) 760
TseI GCWGC 7 cut(s) 80, 481, 487, 520, 570, 860, 1133
Tsp45I GTSAC 1 cut(s) 760
TspDTI ATGAA 3 cut(s) 1176, 1564, 1732
TspGWI ACGGA 5 cut(s) 255, 415, 960, 1348, 1728
TspRI CASTG 1 cut(s) 1488
VpaK11BI GGWCC 2 cut(s) 287, 753
VspI ATTAAT 1 cut(s) 651
XapI RAATTY 2 cut(s) 714, 1257
XceI RCATGY 1 cut(s) 802
XcmI CCANNNNNNNNNTGG 1 cut(s) 688
XhoI CTCGAG 3 cut(s) 781, 866, 1499
XspI CTAG 4 cut(s) 275, 284, 1937, 1981
ZrmI AGTACT 1 cut(s) 1760
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.