Rorug07G0162100

protein At4g18490 isoform X1

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
13002915 .. 13007766
4852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0162100.1

Sequence Viewer

Length: 2286 bp
ATGGCCTTCACTTTCCTCTCAATCCCTCACTTTCTCTCTCCCCAACCCAACTTTCTCTCTCTAAAACCCCAATTCGCCTCTCTCCGACCCTCCATCTTCCCTCTCCCGGCCCGCCCACTCAAACCCGCCCACGCAATCGGCCCCGACGGCAAGTACTACCCGGACCCCTCCGACGACGACCCGCCCGAAGCCCCCGAAGACTCCGGCCACGGCGTCTCCAAATTCCAGCAAATCCAGCGCCAGGCCTCCCGCCACCAGAAGCTCCAGGAGGACGACTTCAAGAAGCACCAGAACACCATGCTCTCCGCCATTGCCGACGTCGAGGACCCGCCGGAGAACCCCGGCTCCGGAACTAGCCCCAGCTCCGGGGACGATTTGTTCGGCGACATCGACGAAGCTATTGCCTTGAAGCGCAAGGAGTTTGTGAAGCAAGGGCTTTTGAAGCCGAACCCTAAGGTGGAGGCGGTGGAGGAGCTGGGGCCGGAGGAGGTTGTGGACTTGGACGAGATTGATGAACTTCAGGGGCTGGCGATTGTGAGTGAGGAAGGGACTGAGAAATTCGACTCAAAGGTTAGTGATTTGGATGAGAAGGATGGTGTTTCGGTTTCGAGTTCTTTGTTTGATATGGATTTTGATAATTATGGTAAGACTAGGGCTAGAATTGTGGAACCTAAGTTTAAAATGAGCTTAGCTGAGCTTTTGGATGAGAGCAAAGTGGTGCCGATTTCGGTTTATGGTGATTTAGAGGTGGAGATAACCGGAATTCAGCATGATTCGAGGGTGGTTAGTGCCGGGGATTTGTTTGTGTGCTGTGTTGGGAGGAAAACCGACGGTCATTTGTATTTGAGTGAGGCTATTAAGAGAGGAGCGGTGGCTGTAGTAGCTAGTAAGGAGATATACATGGAGGAAAGCTTGGGGTGCAAGGCATTGGTCATTGTGGAAGATACCAATGCTGATTTACCTGCATTGGCTGCATCGTTTTATAGGTATCCGTCGAAGAATATGTCGGTGATTGGGATAACGGGGACAAATGGGAAGACGACGTCAGCGTATTTGATAAAGGGGATGTATGAAGCGATGGGATTGAGGACGGGTATGTTGAGCACGGTTGCGTATTATGTACATGGAGATAATAAGTTGGAATCGCCTAATACAACCCCGGATGCTGTTTTGGTTCAAAATATGATGGCCAAGATGCTCCATAATGGGGCTGAAGCAGTTGTCATGGAGGCTTCTTCTCACGGGCTAGCTCTGTCTAGGTGTGATGAAGTTGATATTGACATAGCGGTTTTCACAAATTTGACGGGAGACCATTTGGATTTTCACGTGACTGAGGAGGAGTACAGGGAGGCAAAGGGTAAGTTGTTTTCAAGGATGGTTGATCCAGAACGGCACAGGAAAGTTGTCAACATTGATGACCCAAATGCACCTTTCTTCATTTCACAGGGGAACCCTGATGTTCCAGTTGTGACCTTTGCCATGGAGAATAAGAATGCAGATGTCTATCCCTTGAAGTTTGAACTTTCCTTGTTTGAGACACAGGTTTTAGTCAATACTCCCAATGGTATATTGGAGATATCATCAGGGTTGCTTGGACGGCATAACATTTACAATATACTGGCTGCAGTAGCAGTTGGGATTGCAGTTGGAGCACCATTAGAAGACATCGTTAGGGGAATTGAAGAGGTTGATGCTGTTCCAGGGAGGTGTGAGTTGATAGACGAGGAACAGGCATTTGGAGTGATTGTGGATTATGCTCACACTCCTGATGCCTTGTCCAGGCTATTGGATTCTGTACGGGACCTTGGTGCAAGGAGGATTATTACTGTAATCGGTTGTCCTGGGGAGAGTGACAGAGGGAAAAGACCTATGATGGCGAAGATTGCAACAGATAAAAGTGATGTGACAATACTGACATCTGACAATCCAAAGAATGAAGATCCATTGGACATCTTGGATGATATGCTGGCTGGTATAGGATGGACAATGCAGGAATACTTGAAACATGGCGAGAATGATTACTACCCACCTCTTCCAAATGGTCATAGGATTTTCCTGCATGATATAAGACGAGTAGCCGTACGGTGTGCTGTTGCCATGGGTGAGGAAGGTGATATGGTTGTGGTTGCAGGCAAAGGCCATGAAGCGTATCAGATAGAAGGGGACAAAAAAGAGTTCTTTGATGACCGGGAAGAGTGTCGAGAGGCATTACAGTATGTTGATGAGCTTCACCAAGCTGGAATTGACACAAGTGAATTCCCGTGGAGGTTACCCGAGAGTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

761

Amino Acids

83.76

Weight (kDa)

4.7

Isoelectric Point (pI)

37.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mur_ligase PF01225 251 - 313 2.5e-08 Mur ligase family, catalytic domain
Mur_ligase_M PF08245 340 - 545 9.9e-55 Mur ligase middle domain
Mur_ligase_C PF02875 568 - 713 3.3e-25 Mur ligase, glutamate ligase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 321, 1046
Acc36I ACCTGC 1 cut(s) 970
AccB1I GGYRCC 1 cut(s) 718
AccBSI CCGCTC 1 cut(s) 869
AccIII TCCGGA 1 cut(s) 347
AciI CCGC 9 cut(s) 112, 126, 182, 250, 306, 329, 464, 869, 1286
AclWI GGATC 2 cut(s) 1376, 1934
AcoI YGGCCR 2 cut(s) 205, 1188
AcsI RAATTY 5 cut(s) 221, 557, 762, 1297, 2255
AcuI CTGAAG 2 cut(s) 503, 1233
AcvI CACGTG 1 cut(s) 1327
AcyI GRCGYC 3 cut(s) 213, 318, 1043
AfaI GTAC 5 cut(s) 155, 1122, 1343, 1797, 2082
AfiI CCNNNNNNNGG 8 cut(s) 106, 241, 347, 365, 366, 457, 1207, 1779
AgsI TTSAA 9 cut(s) 280, 409, 442, 1178, 1371, 1513, 1520, 1682, 2002
AjnI CCWGG 5 cut(s) 240, 264, 1699, 1778, 1840
AjuI GAANNNNNNNTTGG 4 cut(s) 36, 68, 1719, 1751
AloI GAACNNNNNNTCC 4 cut(s) 329, 361, 362, 394
Alw21I GWGCWC 2 cut(s) 1106, 1654
Alw26I GTCTC 3 cut(s) 220, 1302, 1529
AlwI GGATC 2 cut(s) 1376, 1934
AlwNI CAGNNNCTG 1 cut(s) 526
Ama87I CYCGRG 1 cut(s) 2273
Aor13HI TCCGGA 1 cut(s) 347
AoxI GGCC 8 cut(s) 3, 108, 139, 205, 243, 479, 1188, 2137
ApeKI GCWGC 2 cut(s) 971, 1622
ApoI RAATTY 5 cut(s) 221, 557, 762, 1297, 2255
ArsI GACNNNNNNTTYG 4 cut(s) 362, 394, 989, 1021
AspLEI GCGC 2 cut(s) 240, 414
AspS9I GGNCC 6 cut(s) 109, 140, 163, 325, 479, 1801
AsuC2I CCSGG 7 cut(s) 107, 161, 342, 367, 793, 1160, 2189
AsuHPI GGTGA 5 cut(s) 749, 1021, 2114, 2123, 2222
AsuNHI GCTAGC 1 cut(s) 1246
AvaI CYCGRG 1 cut(s) 2273
AvaII GGWCC 3 cut(s) 163, 325, 1801
AxyI CCTNAGG 1 cut(s) 453
BalI TGGCCA 1 cut(s) 1190
BanI GGYRCC 1 cut(s) 718
BbrPI CACGTG 1 cut(s) 1327
BbsI GAAGAC 3 cut(s) 204, 1043, 1668
Bbv12I GWGCWC 2 cut(s) 1106, 1654
BbvI GCAGC 2 cut(s) 958, 1609
BccI CCATC 7 cut(s) 101, 587, 1072, 1180, 1369, 1867, 1974
BceAI ACGGC 5 cut(s) 163, 226, 1406, 1613, 2063
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciT130I CCWGG 5 cut(s) 242, 266, 1701, 1780, 1842
BciVI GTATCC 1 cut(s) 999
BcnI CCSGG 7 cut(s) 107, 161, 342, 367, 793, 1160, 2189
BcoDI GTCTC 3 cut(s) 220, 1302, 1529
BfaI CTAG 6 cut(s) 354, 651, 657, 885, 1247, 1257
BfmI CTRYAG 2 cut(s) 876, 1623
BfoI RGCGCY 1 cut(s) 241
BfuAI ACCTGC 1 cut(s) 970
BfuI GTATCC 1 cut(s) 999
BglI GCCNNNNNGGC 1 cut(s) 147
BisI GCNGC 2 cut(s) 972, 1623
BlpI GCTNAGC 2 cut(s) 688, 693
BlsI GCNGC 2 cut(s) 973, 1624
BmcAI AGTACT 1 cut(s) 155
Bme18I GGWCC 3 cut(s) 163, 325, 1801
BmeT110I CYCGRG 1 cut(s) 2273
BmgT120I GGNCC 6 cut(s) 109, 140, 163, 325, 479, 1801
BmiI GGNNCC 9 cut(s) 142, 165, 327, 346, 480, 669, 720, 1451, 1802
BmsI GCATC 5 cut(s) 983, 1153, 1185, 1681, 1759
BmtI GCTAGC 1 cut(s) 1250
BpiI GAAGAC 3 cut(s) 204, 1043, 1668
BpmI CTGGAG 1 cut(s) 248
Bpu1102I GCTNAGC 2 cut(s) 688, 693
BpuMI CCSGG 7 cut(s) 107, 161, 342, 367, 793, 1160, 2189
BsaAI YACGTR 1 cut(s) 1327
BsaBI GATNNNNATC 1 cut(s) 1503
BsaHI GRCGYC 3 cut(s) 213, 318, 1043
BsaI GGTCTC 1 cut(s) 1302
BsaWI WCCGGW 2 cut(s) 347, 758
BsaXI ACNNNNNCTCC 6 cut(s) 200, 230, 329, 359, 1731, 1761
Bsc4I CCNNNNNNNGG 8 cut(s) 106, 241, 347, 365, 366, 457, 1207, 1779
Bse1I ACTGG 2 cut(s) 1463, 1623
Bse21I CCTNAGG 1 cut(s) 453
Bse3DI GCAATG 1 cut(s) 309
Bse8I GATNNNNATC 1 cut(s) 1503
BseAI TCCGGA 1 cut(s) 347
BseBI CCWGG 5 cut(s) 242, 266, 1701, 1780, 1842
BseGI GGATG 8 cut(s) 589, 598, 709, 1071, 1168, 1380, 1963, 1985
BseJI GATNNNNATC 1 cut(s) 1503
BseLI CCNNNNNNNGG 8 cut(s) 106, 241, 347, 365, 366, 457, 1207, 1779
BseMI GCAATG 1 cut(s) 309
BseMII CTCAG 3 cut(s) 543, 684, 1323
BseNI ACTGG 2 cut(s) 1463, 1623
BseRI GAGGAG 5 cut(s) 485, 500, 879, 1349, 1352
BseXI GCAGC 2 cut(s) 958, 1609
BseYI CCCAGC 2 cut(s) 359, 475
BshFI GGCC 8 cut(s) 5, 110, 141, 207, 245, 481, 1190, 2139
BshNI GGYRCC 1 cut(s) 718
BsiHKAI GWGCWC 2 cut(s) 1106, 1654
BsiHKCI CYCGRG 1 cut(s) 2273
BsiWI CGTACG 1 cut(s) 2080
BslFI GGGAC 5 cut(s) 383, 562, 1039, 1814, 2177
BslI CCNNNNNNNGG 8 cut(s) 106, 241, 347, 365, 366, 457, 1207, 1779
BsmAI GTCTC 3 cut(s) 220, 1302, 1529
BsmBI CGTCTC 1 cut(s) 220
BsmFI GGGAC 5 cut(s) 383, 562, 1039, 1814, 2177
BsmI GAATGC 1 cut(s) 1498
BsnI GGCC 8 cut(s) 5, 110, 141, 207, 245, 481, 1190, 2139
Bso31I GGTCTC 1 cut(s) 1302
BsoBI CYCGRG 1 cut(s) 2273
Bsp1286I GDGCHC 2 cut(s) 1106, 1654
Bsp13I TCCGGA 1 cut(s) 347
Bsp1407I TGTACA 1 cut(s) 1120
Bsp143I GATC 2 cut(s) 1381, 1939
Bsp1720I GCTNAGC 2 cut(s) 688, 693
Bsp19I CCATGG 2 cut(s) 1479, 2097
BspACI CCGC 9 cut(s) 112, 126, 182, 250, 306, 329, 464, 869, 1286
BspANI GGCC 8 cut(s) 5, 110, 141, 207, 245, 481, 1190, 2139
BspCNI CTCAG 3 cut(s) 544, 685, 1324
BspEI TCCGGA 1 cut(s) 347
BspLI GGNNCC 9 cut(s) 142, 165, 327, 346, 480, 669, 720, 1451, 1802
BspMAI CTGCAG 1 cut(s) 1627
BspMI ACCTGC 1 cut(s) 970
BspOI GCTAGC 1 cut(s) 1250
BspPI GGATC 2 cut(s) 1376, 1934
BspT107I GGYRCC 1 cut(s) 718
BspTNI GGTCTC 1 cut(s) 1302
BsrBI CCGCTC 1 cut(s) 869
BsrDI GCAATG 1 cut(s) 309
BsrGI TGTACA 1 cut(s) 1120
BsrI ACTGG 2 cut(s) 1463, 1623
BssMI GATC 2 cut(s) 1381, 1939
BssNI GRCGYC 3 cut(s) 213, 318, 1043
BssT1I CCWWGG 3 cut(s) 1479, 1804, 2097
Bst2UI CCWGG 5 cut(s) 242, 266, 1701, 1780, 1842
Bst4CI ACNGT 5 cut(s) 833, 1108, 1828, 2085, 2214
Bst6I CTCTTC 3 cut(s) 1677, 2037, 2187
BstACI GRCGYC 3 cut(s) 213, 318, 1043
BstAPI GCANNNNNTGC 1 cut(s) 971
BstAUI TGTACA 1 cut(s) 1120
BstBAI YACGTR 1 cut(s) 1327
BstC8I GCNNGC 5 cut(s) 112, 528, 1248, 1968, 2131
BstDEI CTNAG 6 cut(s) 453, 552, 672, 688, 693, 1332
BstDSI CCRYGG 4 cut(s) 208, 1479, 2097, 2261
BstEII GGTNACC 1 cut(s) 2268
BstENI CCTNNNNNAGG 1 cut(s) 1777
BstF5I GGATG 8 cut(s) 589, 598, 709, 1071, 1168, 1380, 1963, 1985
BstH2I RGCGCY 1 cut(s) 241
BstHHI GCGC 2 cut(s) 240, 414
BstKTI GATC 2 cut(s) 1384, 1942
BstMAI GTCTC 3 cut(s) 220, 1302, 1529
BstMBI GATC 2 cut(s) 1381, 1939
BstNI CCWGG 5 cut(s) 242, 266, 1701, 1780, 1842
BstPI GGTNACC 1 cut(s) 2268
BstSFI CTRYAG 2 cut(s) 876, 1623
BstV1I GCAGC 2 cut(s) 958, 1609
BstV2I GAAGAC 3 cut(s) 204, 1043, 1668
BstX2I RGATCY 1 cut(s) 1939
BstXI CCANNNNNNTGG 1 cut(s) 1786
BstYI RGATCY 1 cut(s) 1939
Bsu36I CCTNAGG 1 cut(s) 453
BsuI GTATCC 1 cut(s) 999
BsuRI GGCC 8 cut(s) 5, 110, 141, 207, 245, 481, 1190, 2139
BtgI CCRYGG 4 cut(s) 208, 1479, 2097, 2261
BtgZI GCGATG 1 cut(s) 1091
BtsCI GGATG 8 cut(s) 589, 598, 709, 1071, 1168, 1380, 1963, 1985
BveI ACCTGC 1 cut(s) 970
Cac8I GCNNGC 5 cut(s) 112, 528, 1248, 1968, 2131
CaiI CAGNNNCTG 1 cut(s) 526
CfoI GCGC 2 cut(s) 240, 414
Cfr13I GGNCC 6 cut(s) 109, 140, 163, 325, 479, 1801
CseI GACGC 1 cut(s) 202
Csp6I GTAC 5 cut(s) 154, 1121, 1342, 1796, 2081
CviQI GTAC 5 cut(s) 154, 1121, 1342, 1796, 2081
DdeI CTNAG 6 cut(s) 453, 552, 672, 688, 693, 1332
DpnI GATC 2 cut(s) 1383, 1941
DpnII GATC 2 cut(s) 1381, 1939
DraI TTTAAA 1 cut(s) 679
EaeI YGGCCR 2 cut(s) 205, 1188
Eam1104I CTCTTC 3 cut(s) 1677, 2037, 2187
EarI CTCTTC 3 cut(s) 1677, 2037, 2187
EciI GGCGGA 1 cut(s) 295
Eco130I CCWWGG 3 cut(s) 1479, 1804, 2097
Eco147I AGGCCT 1 cut(s) 245
Eco31I GGTCTC 1 cut(s) 1302
Eco32I GATATC 1 cut(s) 1578
Eco47I GGWCC 3 cut(s) 163, 325, 1801
Eco57I CTGAAG 2 cut(s) 503, 1233
Eco72I CACGTG 1 cut(s) 1327
Eco81I CCTNAGG 1 cut(s) 453
Eco88I CYCGRG 1 cut(s) 2273
Eco91I GGTNACC 1 cut(s) 2268
EcoNI CCTNNNNNAGG 1 cut(s) 1777
EcoO109I RGGNCCY 2 cut(s) 325, 1801
EcoO65I GGTNACC 1 cut(s) 2268
EcoRI GAATTC 2 cut(s) 762, 2255
EcoRII CCWGG 5 cut(s) 240, 264, 1699, 1778, 1840
EcoRV GATATC 1 cut(s) 1578
EcoT14I CCWWGG 3 cut(s) 1479, 1804, 2097
ErhI CCWWGG 3 cut(s) 1479, 1804, 2097
Esp3I CGTCTC 1 cut(s) 220
FaqI GGGAC 5 cut(s) 383, 562, 1039, 1814, 2177
FauI CCCGC 5 cut(s) 119, 133, 189, 257, 336
Fnu4HI GCNGC 2 cut(s) 972, 1623
FokI GGATG 8 cut(s) 596, 605, 716, 1078, 1175, 1387, 1970, 1992
Fsp4HI GCNGC 2 cut(s) 972, 1623
FspBI CTAG 6 cut(s) 354, 651, 657, 885, 1247, 1257
GlaI GCGC 2 cut(s) 239, 413
GluI GCNGC 2 cut(s) 972, 1623
GsaI CCCAGC 2 cut(s) 363, 479
GsuI CTGGAG 1 cut(s) 248
HaeII RGCGCY 1 cut(s) 241
HaeIII GGCC 8 cut(s) 5, 110, 141, 207, 245, 481, 1190, 2139
HgaI GACGC 1 cut(s) 202
HhaI GCGC 2 cut(s) 240, 414
Hin1I GRCGYC 3 cut(s) 213, 318, 1043
Hin6I GCGC 2 cut(s) 238, 412
HinP1I GCGC 2 cut(s) 238, 412
HincII GTYRAC 1 cut(s) 1408
HindII GTYRAC 1 cut(s) 1408
HindIII AAGCTT 1 cut(s) 910
HinfI GANTC 6 cut(s) 200, 563, 773, 1142, 1790, 2278
HphI GGTGA 5 cut(s) 749, 1021, 2114, 2123, 2222
Hpy166II GTNNAC 2 cut(s) 496, 1408
Hpy188I TCNGA 4 cut(s) 86, 172, 1921, 2154
Hpy188III TCNNGA 5 cut(s) 280, 348, 1385, 1766, 2201
Hpy8I GTNNAC 2 cut(s) 496, 1408
Hpy99I CGWCG 9 cut(s) 149, 176, 179, 320, 323, 395, 833, 997, 1045
HpyAV CCTTC 5 cut(s) 16, 539, 583, 2102, 2153
HpyCH4III ACNGT 5 cut(s) 833, 1108, 1828, 2085, 2214
HpyCH4IV ACGT 3 cut(s) 318, 1043, 1326
HpyF3I CTNAG 6 cut(s) 453, 552, 672, 688, 693, 1332
HpySE526I ACGT 3 cut(s) 318, 1043, 1326
Hsp92I GRCGYC 3 cut(s) 213, 318, 1043
HspAI GCGC 2 cut(s) 238, 412
Kpn2I TCCGGA 1 cut(s) 347
Kzo9I GATC 2 cut(s) 1381, 1939
LmnI GCTCC 7 cut(s) 267, 350, 368, 472, 866, 1203, 1649
Lsp1109I GCAGC 2 cut(s) 958, 1609
LweI GCATC 5 cut(s) 983, 1153, 1185, 1681, 1759
MaeI CTAG 6 cut(s) 354, 651, 657, 885, 1247, 1257
MaeII ACGT 3 cut(s) 318, 1043, 1326
MaeIII GTNAC 5 cut(s) 1327, 1468, 1850, 1903, 2268
MalI GATC 2 cut(s) 1383, 1941
MbiI CCGCTC 1 cut(s) 869
MboI GATC 2 cut(s) 1381, 1939
MflI RGATCY 1 cut(s) 1939
MhlI GDGCHC 2 cut(s) 1106, 1654
MlsI TGGCCA 1 cut(s) 1190
MluNI TGGCCA 1 cut(s) 1190
MlyI GAGTC 2 cut(s) 194, 557
MmeI TCCRAC 4 cut(s) 109, 195, 1119, 1627
Mox20I TGGCCA 1 cut(s) 1190
MroI TCCGGA 1 cut(s) 347
MscI TGGCCA 1 cut(s) 1190
MseI TTAA 2 cut(s) 678, 858
Msp20I TGGCCA 1 cut(s) 1190
Mva1269I GAATGC 1 cut(s) 1498
MvaI CCWGG 5 cut(s) 242, 266, 1701, 1780, 1842
NciI CCSGG 7 cut(s) 107, 161, 342, 367, 793, 1160, 2189
NcoI CCATGG 2 cut(s) 1479, 2097
NdeII GATC 2 cut(s) 1381, 1939
NheI GCTAGC 1 cut(s) 1246
NlaIV GGNNCC 9 cut(s) 142, 165, 327, 346, 480, 669, 720, 1451, 1802
NmuCI GTSAC 4 cut(s) 1327, 1468, 1850, 1903
PceI AGGCCT 1 cut(s) 245
PcsI WCGNNNNNNNCGW 3 cut(s) 183, 387, 1046
PctI GAATGC 1 cut(s) 1498
PfeI GAWTC 3 cut(s) 773, 1142, 1790
Pfl23II CGTACG 1 cut(s) 2080
PflFI GACNNNGTC 1 cut(s) 1042
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 2 cut(s) 973, 1624
PleI GAGTC 2 cut(s) 194, 557
PmaCI CACGTG 1 cut(s) 1327
PmlI CACGTG 1 cut(s) 1327
PpsI GAGTC 2 cut(s) 194, 557
Ppu21I YACGTR 1 cut(s) 1327
PpuMI RGGWCCY 2 cut(s) 325, 1801
Psp5II RGGWCCY 2 cut(s) 325, 1801
Psp6I CCWGG 5 cut(s) 240, 264, 1699, 1778, 1840
PspCI CACGTG 1 cut(s) 1327
PspEI GGTNACC 1 cut(s) 2268
PspFI CCCAGC 2 cut(s) 359, 475
PspGI CCWGG 5 cut(s) 240, 264, 1699, 1778, 1840
PspLI CGTACG 1 cut(s) 2080
PspN4I GGNNCC 9 cut(s) 142, 165, 327, 346, 480, 669, 720, 1451, 1802
PspPI GGNCC 6 cut(s) 109, 140, 163, 325, 479, 1801
PspPPI RGGWCCY 2 cut(s) 325, 1801
PstI CTGCAG 1 cut(s) 1627
PstNI CAGNNNCTG 1 cut(s) 526
PsuI RGATCY 1 cut(s) 1939
PsyI GACNNNGTC 1 cut(s) 1042
RsaI GTAC 5 cut(s) 155, 1122, 1343, 1797, 2082
RsaNI GTAC 5 cut(s) 154, 1121, 1342, 1796, 2081
SaqAI TTAA 2 cut(s) 678, 858
SatI GCNGC 2 cut(s) 972, 1623
Sau3AI GATC 2 cut(s) 1381, 1939
Sau96I GGNCC 6 cut(s) 109, 140, 163, 325, 479, 1801
ScaI AGTACT 1 cut(s) 155
SchI GAGTC 2 cut(s) 194, 557
SduI GDGCHC 2 cut(s) 1106, 1654
SfaNI GCATC 5 cut(s) 983, 1153, 1185, 1681, 1759
SfcI CTRYAG 2 cut(s) 876, 1623
SinI GGWCC 3 cut(s) 163, 325, 1801
SseBI AGGCCT 1 cut(s) 245
SsiI CCGC 9 cut(s) 112, 126, 182, 250, 306, 329, 464, 869, 1286
SspMI CTAG 6 cut(s) 354, 651, 657, 885, 1247, 1257
StuI AGGCCT 1 cut(s) 245
StyI CCWWGG 3 cut(s) 1479, 1804, 2097
TaaI ACNGT 5 cut(s) 833, 1108, 1828, 2085, 2214
TaiI ACGT 3 cut(s) 321, 1046, 1329
TaqI TCGA 7 cut(s) 321, 390, 561, 608, 776, 995, 2200
TatI WGTACW 3 cut(s) 153, 1120, 1341
TfiI GAWTC 3 cut(s) 773, 1142, 1790
Tru1I TTAA 2 cut(s) 678, 858
Tru9I TTAA 2 cut(s) 678, 858
TseFI GTSAC 4 cut(s) 1327, 1468, 1850, 1903
TseI GCWGC 2 cut(s) 971, 1622
Tsp45I GTSAC 4 cut(s) 1327, 1468, 1850, 1903
TspDTI ATGAA 6 cut(s) 528, 1086, 1281, 1426, 1950, 2157
TspGWI ACGGA 1 cut(s) 981
Tth111I GACNNNGTC 1 cut(s) 1042
VpaK11BI GGWCC 3 cut(s) 163, 325, 1801
XagI CCTNNNNNAGG 1 cut(s) 1777
XapI RAATTY 5 cut(s) 221, 557, 762, 1297, 2255
XcmI CCANNNNNNNNNTGG 1 cut(s) 1567
XspI CTAG 6 cut(s) 354, 651, 657, 885, 1247, 1257
ZraI GACGTC 2 cut(s) 319, 1044
ZrmI AGTACT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.