Rh1AG141700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
26815253 .. 26816787
1535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG141700.1

Sequence Viewer

Length: 186 bp
ATGGTGCTTTGGGCAGTTCAGGATCTGGATGTAGAGTGGCTAGAATTACAGAAGAGAAAAAGGGATTTGAACTCGAAGTGCATGGAGCTCTGTCCATGTATAACAGTATATGGCAAGTACATTGCTGATAAGCGCATTGATGGGGCAGAGAAGGGTAAGATCAATACTAAGGCATGCTTAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

61

Amino Acids

7.06

Weight (kDa)

7.62

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 30
AfaI GTAC 1 cut(s) 119
AgsI TTSAA 1 cut(s) 70
AluBI AGCT 1 cut(s) 88
AluI AGCT 1 cut(s) 88
Alw21I GWGCWC 1 cut(s) 90
AlwI GGATC 1 cut(s) 30
AlwNI CAGNNNCTG 1 cut(s) 25
AspLEI GCGC 1 cut(s) 135
BanII GRGCYC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 90
BccI CCATC 1 cut(s) 134
BfaI CTAG 1 cut(s) 41
Bse3DI GCAATG 1 cut(s) 120
BseGI GGATG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 90
Bsp1286I GDGCHC 1 cut(s) 90
Bsp143I GATC 2 cut(s) 22, 159
BspPI GGATC 1 cut(s) 30
BsrDI GCAATG 1 cut(s) 120
BssMI GATC 2 cut(s) 22, 159
Bst4CI ACNGT 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 47
BstC8I GCNNGC 1 cut(s) 175
BstDEI CTNAG 2 cut(s) 168, 178
BstF5I GGATG 1 cut(s) 34
BstHHI GCGC 1 cut(s) 135
BstKTI GATC 2 cut(s) 25, 162
BstMBI GATC 2 cut(s) 22, 159
BstNSI RCATGY 1 cut(s) 177
BstX2I RGATCY 1 cut(s) 22
BstYI RGATCY 1 cut(s) 22
BtsCI GGATG 1 cut(s) 34
Cac8I GCNNGC 1 cut(s) 175
CaiI CAGNNNCTG 1 cut(s) 25
CfoI GCGC 1 cut(s) 135
Csp6I GTAC 1 cut(s) 118
CviAII CATG 3 cut(s) 82, 96, 174
CviJI RGCY 2 cut(s) 40, 88
CviKI_1 RGCY 2 cut(s) 40, 88
CviQI GTAC 1 cut(s) 118
DdeI CTNAG 2 cut(s) 168, 178
DpnI GATC 2 cut(s) 24, 161
DpnII GATC 2 cut(s) 22, 159
Eam1104I CTCTTC 1 cut(s) 47
EarI CTCTTC 1 cut(s) 47
Ecl136II GAGCTC 1 cut(s) 88
Eco24I GRGCYC 1 cut(s) 90
Eco53kI GAGCTC 1 cut(s) 88
EcoICRI GAGCTC 1 cut(s) 88
EcoT38I GRGCYC 1 cut(s) 90
FaeI CATG 3 cut(s) 85, 99, 177
FaiI YATR 6 cut(s) 83, 97, 101, 109, 111, 175
FalI AAGNNNNNCTT 1 cut(s) 161
FatI CATG 3 cut(s) 81, 95, 173
FokI GGATG 1 cut(s) 41
FriOI GRGCYC 1 cut(s) 90
FspBI CTAG 1 cut(s) 41
GlaI GCGC 1 cut(s) 134
HhaI GCGC 1 cut(s) 135
Hin1II CATG 3 cut(s) 85, 99, 177
Hin6I GCGC 1 cut(s) 133
HinP1I GCGC 1 cut(s) 133
Hpy188III TCNNGA 2 cut(s) 20, 26
HpyAV CCTTC 1 cut(s) 145
HpyCH4III ACNGT 1 cut(s) 106
HpyCH4V TGCA 1 cut(s) 81
HpyF3I CTNAG 2 cut(s) 168, 178
Hsp92II CATG 3 cut(s) 85, 99, 177
HspAI GCGC 1 cut(s) 133
Kzo9I GATC 2 cut(s) 22, 159
LmnI GCTCC 1 cut(s) 85
LpnPI CCDG 2 cut(s) 5, 11
MaeI CTAG 1 cut(s) 41
MalI GATC 2 cut(s) 24, 161
MboI GATC 2 cut(s) 22, 159
MboII GAAGA 1 cut(s) 64
MflI RGATCY 1 cut(s) 22
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 1 cut(s) 44
NdeII GATC 2 cut(s) 22, 159
NlaIII CATG 3 cut(s) 85, 99, 177
NspI RCATGY 1 cut(s) 177
PaeI GCATGC 1 cut(s) 177
Psp124BI GAGCTC 1 cut(s) 90
PstNI CAGNNNCTG 1 cut(s) 25
PsuI RGATCY 1 cut(s) 22
RsaI GTAC 1 cut(s) 119
RsaNI GTAC 1 cut(s) 118
SacI GAGCTC 1 cut(s) 90
Sau3AI GATC 2 cut(s) 22, 159
SduI GDGCHC 1 cut(s) 90
SetI ASST 1 cut(s) 90
SgeI CNNG 7 cut(s) 32, 38, 53, 85, 94, 108, 127
SphI GCATGC 1 cut(s) 177
Sse9I AATT 1 cut(s) 44
SspMI CTAG 1 cut(s) 41
SstI GAGCTC 1 cut(s) 90
TaaI ACNGT 1 cut(s) 106
TaqI TCGA 1 cut(s) 74
TasI AATT 1 cut(s) 44
TatI WGTACW 1 cut(s) 117
XceI RCATGY 1 cut(s) 177
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.