UPF0496 protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0337761 RchiOBHm_Chr1g0337831 |
| rosa_laevigata | RLG00000015780 RLG00000029499 RLG00000029520 RLG00000029773 |
| rosa_multiflora | Rmu_sc0002899.1_g000001 Rmu_sc0003367.1_g000022 Rmu_sc0006537.1_g000039 |
| rosa_roxburghii | Rroxscaffold_1G00022150 Rroxscaffold_4G00328560 |
| rosa_samantha | Rh1AG111900 Rh1CG099600 Rh1CG107600 Rh1CG108700 Rh1DG106800 Rh1DG115000 Rh1DG116400 Rh2AG020700 Rh2AG020800 Rh2CG021700 Rh2CG158100 Rh2DG021400 Rh2DG021500 Rh7AG065400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 59, 69 |
| AcsI | RAATTY | 1 cut(s) | 116 |
| AcuI | CTGAAG | 1 cut(s) | 118 |
| AcyI | GRCGYC | 1 cut(s) | 162 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AgsI | TTSAA | 4 cut(s) | 19, 94, 116, 227 |
| AluBI | AGCT | 4 cut(s) | 236, 250, 259, 264 |
| AluI | AGCT | 4 cut(s) | 236, 250, 259, 264 |
| Alw26I | GTCTC | 1 cut(s) | 188 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApoI | RAATTY | 1 cut(s) | 116 |
| BaeGI | GKGCMC | 1 cut(s) | 83 |
| BccI | CCATC | 4 cut(s) | 80, 151, 173, 197 |
| BceAI | ACGGC | 1 cut(s) | 22 |
| BcoDI | GTCTC | 1 cut(s) | 188 |
| BfaI | CTAG | 1 cut(s) | 265 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BisI | GCNGC | 1 cut(s) | 69 |
| BlpI | GCTNAGC | 1 cut(s) | 260 |
| BlsI | GCNGC | 1 cut(s) | 70 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 260 |
| BsaHI | GRCGYC | 1 cut(s) | 162 |
| BsaWI | WCCGGW | 1 cut(s) | 139 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| Bse3DI | GCAATG | 1 cut(s) | 122 |
| BseGI | GGATG | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseMI | GCAATG | 1 cut(s) | 122 |
| BseSI | GKGCMC | 1 cut(s) | 83 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BsiSI | CCGG | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BsmAI | GTCTC | 1 cut(s) | 188 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bsp1286I | GDGCHC | 1 cut(s) | 83 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 260 |
| BspACI | CCGC | 2 cut(s) | 59, 69 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BsrDI | GCAATG | 1 cut(s) | 122 |
| BssMI | GATC | 1 cut(s) | 109 |
| BssNI | GRCGYC | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 199 |
| BstACI | GRCGYC | 1 cut(s) | 162 |
| BstDEI | CTNAG | 1 cut(s) | 260 |
| BstF5I | GGATG | 1 cut(s) | 162 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMAI | GTCTC | 1 cut(s) | 188 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 65, 256 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstSLI | GKGCMC | 1 cut(s) | 83 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtsCI | GGATG | 1 cut(s) | 162 |
| CseI | GACGC | 1 cut(s) | 170 |
| CviAII | CATG | 1 cut(s) | 107 |
| CviJI | RGCY | 8 cut(s) | 5, 47, 68, 146, 236, 250, 259, 264 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 47, 68, 146, 236, 250, 259, 264 |
| DdeI | CTNAG | 1 cut(s) | 260 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| Eco57I | CTGAAG | 1 cut(s) | 118 |
| FaeI | CATG | 1 cut(s) | 110 |
| FaiI | YATR | 4 cut(s) | 52, 54, 108, 239 |
| FatI | CATG | 1 cut(s) | 106 |
| Fnu4HI | GCNGC | 1 cut(s) | 69 |
| FokI | GGATG | 1 cut(s) | 169 |
| Fsp4HI | GCNGC | 1 cut(s) | 69 |
| FspBI | CTAG | 1 cut(s) | 265 |
| GluI | GCNGC | 1 cut(s) | 69 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HapII | CCGG | 1 cut(s) | 140 |
| HgaI | GACGC | 1 cut(s) | 170 |
| Hin1I | GRCGYC | 1 cut(s) | 162 |
| Hin1II | CATG | 1 cut(s) | 110 |
| HpaII | CCGG | 1 cut(s) | 140 |
| Hpy188I | TCNGA | 1 cut(s) | 137 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 193 |
| HpyAV | CCTTC | 1 cut(s) | 221 |
| HpyCH4III | ACNGT | 1 cut(s) | 199 |
| HpyCH4V | TGCA | 1 cut(s) | 122 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 65, 256 |
| HpyF3I | CTNAG | 1 cut(s) | 260 |
| Hsp92I | GRCGYC | 1 cut(s) | 162 |
| Hsp92II | CATG | 1 cut(s) | 110 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| LpnPI | CCDG | 3 cut(s) | 29, 136, 153 |
| MaeI | CTAG | 1 cut(s) | 265 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MboII | GAAGA | 1 cut(s) | 226 |
| MhlI | GDGCHC | 1 cut(s) | 83 |
| MluCI | AATT | 2 cut(s) | 116, 222 |
| MnlI | CCTC | 1 cut(s) | 158 |
| MseI | TTAA | 1 cut(s) | 63 |
| MspI | CCGG | 1 cut(s) | 140 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 65, 256 |
| NdeII | GATC | 1 cut(s) | 109 |
| NlaIII | CATG | 1 cut(s) | 110 |
| PkrI | GCNGC | 1 cut(s) | 70 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| SatI | GCNGC | 1 cut(s) | 69 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| SduI | GDGCHC | 1 cut(s) | 83 |
| SetI | ASST | 5 cut(s) | 232, 238, 252, 261, 266 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SgeI | CNNG | 7 cut(s) | 56, 88, 119, 125, 152, 163, 205 |
| Sse9I | AATT | 2 cut(s) | 116, 222 |
| SsiI | CCGC | 2 cut(s) | 59, 69 |
| SspMI | CTAG | 1 cut(s) | 265 |
| TaaI | ACNGT | 1 cut(s) | 199 |
| TaqI | TCGA | 1 cut(s) | 192 |
| TasI | AATT | 2 cut(s) | 116, 222 |
| TauI | GCSGC | 1 cut(s) | 71 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| TspDTI | ATGAA | 1 cut(s) | 69 |
| XapI | RAATTY | 1 cut(s) | 116 |
| XspI | CTAG | 1 cut(s) | 265 |