Rh2CG222800

Elongator complex protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
22389390 .. 22390913
1524 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG222800.1

Sequence Viewer

Length: 267 bp
ATGGCTGCGACCAAGACTAGGAGGAGTAGCTTCTCTCGCAGTTTTTCGGGTGCAAGCTCACCTCAAATCCCAGGACTCAAGCATGGACCCAATGGGACAATGTTTGTGTCATCTGGGATTCCAGACCTTGACAATGAGGACAAGGAATTGGCAACGCTCCTTACTGGTTACCAGGACATGGTTGGCCTTCTTAATGTGCAGAAAGTAGCGCAGATTAACACACAGGTAGTGCAAAAGTTTGCTTCACCCAAATCAAACACTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000993 GO:0001098 GO:0001099 GO:0001101 GO:0001932 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006325 GO:0006351 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006368 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0006996 GO:0008023 GO:0008150 GO:0008152 GO:0008284 GO:0008607 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009744 GO:0009889 GO:0009892 GO:0009966 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010928 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019207 GO:0019219 GO:0019220 GO:0019222 GO:0019438 GO:0019538 GO:0019887 GO:0019899 GO:0023051 GO:0030234 GO:0031248 GO:0031323 GO:0031326 GO:0031399 GO:0031537 GO:0031538 GO:0031974 GO:0031981 GO:0032268 GO:0032774 GO:0032991 GO:0033588 GO:0033993 GO:0034285 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042127 GO:0042221 GO:0042325 GO:0043170 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043549 GO:0043609 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045859 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048831 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051239 GO:0051246 GO:0051252 GO:0051276 GO:0051338 GO:0051716 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0070063 GO:0070887 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097305 GO:0097659 GO:0098772 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902493 GO:1902494 GO:1903506 GO:1990234 GO:2000024 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

9.41

Weight (kDa)

9.22

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 178
AfiI CCNNNNNNNGG 2 cut(s) 18, 178
AjnI CCWGG 2 cut(s) 70, 171
AluBI AGCT 2 cut(s) 30, 57
AluI AGCT 2 cut(s) 30, 57
AoxI GGCC 1 cut(s) 184
ApeKI GCWGC 1 cut(s) 5
AspLEI GCGC 1 cut(s) 211
AspS9I GGNCC 1 cut(s) 86
AsuHPI GGTGA 2 cut(s) 51, 237
AvaII GGWCC 1 cut(s) 86
BciT130I CCWGG 2 cut(s) 72, 173
BfaI CTAG 1 cut(s) 18
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme1390I CCNGG 2 cut(s) 72, 173
Bme18I GGWCC 1 cut(s) 86
BmgT120I GGNCC 1 cut(s) 86
BmiI GGNNCC 1 cut(s) 88
BmrFI CCNGG 2 cut(s) 72, 173
BpuEI CTTGAG 1 cut(s) 62
BsaJI CCNNGG 1 cut(s) 70
Bsc4I CCNNNNNNNGG 2 cut(s) 18, 178
Bse1I ACTGG 1 cut(s) 169
BseBI CCWGG 2 cut(s) 72, 173
BseDI CCNNGG 1 cut(s) 70
BseLI CCNNNNNNNGG 2 cut(s) 18, 178
BseNI ACTGG 1 cut(s) 169
BseRI GAGGAG 1 cut(s) 37
BsgI GTGCAG 1 cut(s) 218
BshFI GGCC 1 cut(s) 186
BslFI GGGAC 1 cut(s) 109
BslI CCNNNNNNNGG 2 cut(s) 18, 178
BsmFI GGGAC 1 cut(s) 109
BsnI GGCC 1 cut(s) 186
BspANI GGCC 1 cut(s) 186
BspLI GGNNCC 1 cut(s) 88
BsrI ACTGG 1 cut(s) 169
BssECI CCNNGG 1 cut(s) 70
Bst2UI CCWGG 2 cut(s) 72, 173
BstC8I GCNNGC 1 cut(s) 55
BstEII GGTNACC 1 cut(s) 167
BstHHI GCGC 1 cut(s) 211
BstMWI GCNNNNNNNGC 1 cut(s) 36
BstNI CCWGG 2 cut(s) 72, 173
BstPI GGTNACC 1 cut(s) 167
BstSCI CCNGG 2 cut(s) 70, 171
BsuRI GGCC 1 cut(s) 186
BtsIMutI CAGTG 1 cut(s) 258
Cac8I GCNNGC 1 cut(s) 55
CfoI GCGC 1 cut(s) 211
Cfr13I GGNCC 1 cut(s) 86
CviAII CATG 2 cut(s) 83, 178
CviJI RGCY 4 cut(s) 5, 30, 57, 186
CviKI_1 RGCY 4 cut(s) 5, 30, 57, 186
Eco47I GGWCC 1 cut(s) 86
Eco91I GGTNACC 1 cut(s) 167
EcoO65I GGTNACC 1 cut(s) 167
EcoRII CCWGG 2 cut(s) 70, 171
FaeI CATG 2 cut(s) 86, 181
FaiI YATR 2 cut(s) 84, 179
FaqI GGGAC 1 cut(s) 109
FatI CATG 2 cut(s) 82, 177
Fnu4HI GCNGC 1 cut(s) 6
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 1 cut(s) 18
GlaI GCGC 1 cut(s) 210
GluI GCNGC 1 cut(s) 6
HaeIII GGCC 1 cut(s) 186
HhaI GCGC 1 cut(s) 211
Hin1II CATG 2 cut(s) 86, 181
Hin6I GCGC 1 cut(s) 209
HinP1I GCGC 1 cut(s) 209
HinfI GANTC 2 cut(s) 75, 118
HphI GGTGA 2 cut(s) 51, 237
Hpy188III TCNNGA 1 cut(s) 122
HpyAV CCTTC 1 cut(s) 197
HpyCH4V TGCA 3 cut(s) 53, 199, 232
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
Hsp92II CATG 2 cut(s) 86, 181
HspAI GCGC 1 cut(s) 209
LmnI GCTCC 1 cut(s) 162
LpnPI CCDG 8 cut(s) 57, 84, 99, 135, 150, 158, 185, 209
MaeI CTAG 1 cut(s) 18
MaeIII GTNAC 1 cut(s) 167
MluCI AATT 1 cut(s) 146
MlyI GAGTC 1 cut(s) 69
MnlI CCTC 3 cut(s) 15, 72, 130
MseI TTAA 2 cut(s) 192, 216
MspR9I CCNGG 2 cut(s) 72, 173
MvaI CCWGG 2 cut(s) 72, 173
MwoI GCNNNNNNNGC 1 cut(s) 36
NlaIII CATG 2 cut(s) 86, 181
NlaIV GGNNCC 1 cut(s) 88
PfeI GAWTC 1 cut(s) 118
PflMI CCANNNNNTGG 1 cut(s) 178
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
Psp6I CCWGG 2 cut(s) 70, 171
PspEI GGTNACC 1 cut(s) 167
PspGI CCWGG 2 cut(s) 70, 171
PspN4I GGNNCC 1 cut(s) 88
PspPI GGNCC 1 cut(s) 86
SaqAI TTAA 2 cut(s) 192, 216
SatI GCNGC 1 cut(s) 6
Sau96I GGNCC 1 cut(s) 86
SchI GAGTC 1 cut(s) 69
ScrFI CCNGG 2 cut(s) 72, 173
SetI ASST 5 cut(s) 32, 59, 64, 129, 228
SinI GGWCC 1 cut(s) 86
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
Sse9I AATT 1 cut(s) 146
SspMI CTAG 1 cut(s) 18
StyD4I CCNGG 2 cut(s) 70, 171
TasI AATT 1 cut(s) 146
TfiI GAWTC 1 cut(s) 118
Tru1I TTAA 2 cut(s) 192, 216
Tru9I TTAA 2 cut(s) 192, 216
TscAI CASTG 1 cut(s) 265
TseI GCWGC 1 cut(s) 5
TspRI CASTG 1 cut(s) 265
Van91I CCANNNNNTGG 1 cut(s) 178
VpaK11BI GGWCC 1 cut(s) 86
XcmI CCANNNNNNNNNTGG 1 cut(s) 179
XspI CTAG 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.