transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G27740 AT5G43175 |
| fragaria_vesca | FvH4_2g04220 FvH4_2g33230 FvH4_4g05902 |
| malus_domestica | MD05G1098900.v1.1 MD08G1086200.v1.1 MD10G1104900.v1.1 MD15G1071200.v1.1 |
| prunus_persica | Prupe.1G424000_v2.0.a1 Prupe.1G424100_v2.0.a1 Prupe.8G143600_v2.0.a1 |
| pyrus_communis | pycom05g09790 |
| rosa_chinensis | RchiOBHm_Chr6g0253641 RchiOBHm_Chr6g0309431 |
| rosa_laevigata | RLG00000010566 RLG00000014997 |
| rosa_multiflora | Rmu_co8093044.1_g000001 Rmu_co8395731.1_g000001 Rmu_co8495863.1_g000001 Rmu_sc0000331.1_g000011 Rmu_sc0007785.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00159410 Rroxscaffold_7G00211740 |
| rosa_rugosa | Rorug05G0545200 Rorug06G0372000 |
| rosa_samantha | Rh4AG076300 Rh4CG081200 Rh6AG060900 Rh6AG485100 Rh6BG054700 Rh6BG494300 Rh6CG054300 Rh6CG499300 Rh6DG051800 Rh6DG485500 |
| rosa_wichuraiana | Rw4G006130 Rw4G006170 Rw6G005410 Rw6G042250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 42 |
| AclWI | GGATC | 1 cut(s) | 197 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 92 |
| AgsI | TTSAA | 1 cut(s) | 130 |
| AluBI | AGCT | 4 cut(s) | 33, 79, 119, 146 |
| AluI | AGCT | 4 cut(s) | 33, 79, 119, 146 |
| AlwI | GGATC | 1 cut(s) | 197 |
| ApeKI | GCWGC | 3 cut(s) | 33, 113, 116 |
| AseI | ATTAAT | 1 cut(s) | 63 |
| BbvI | GCAGC | 3 cut(s) | 20, 100, 128 |
| BccI | CCATC | 1 cut(s) | 44 |
| BfaI | CTAG | 1 cut(s) | 150 |
| BfmI | CTRYAG | 1 cut(s) | 114 |
| BisI | GCNGC | 3 cut(s) | 34, 114, 117 |
| BlsI | GCNGC | 3 cut(s) | 35, 115, 118 |
| BmsI | GCATC | 1 cut(s) | 157 |
| BsaBI | GATNNNNATC | 1 cut(s) | 54 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 92 |
| Bse8I | GATNNNNATC | 1 cut(s) | 54 |
| BseGI | GGATG | 1 cut(s) | 102 |
| BseJI | GATNNNNATC | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseRI | GAGGAG | 1 cut(s) | 25 |
| BseXI | GCAGC | 3 cut(s) | 20, 100, 128 |
| BslFI | GGGAC | 1 cut(s) | 169 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BsmFI | GGGAC | 1 cut(s) | 169 |
| Bsp143I | GATC | 1 cut(s) | 189 |
| BspACI | CCGC | 1 cut(s) | 42 |
| BspMAI | CTGCAG | 1 cut(s) | 118 |
| BspPI | GGATC | 1 cut(s) | 197 |
| BssMI | GATC | 1 cut(s) | 189 |
| Bst6I | CTCTTC | 1 cut(s) | 192 |
| BstDEI | CTNAG | 1 cut(s) | 173 |
| BstF5I | GGATG | 1 cut(s) | 102 |
| BstKTI | GATC | 1 cut(s) | 192 |
| BstMBI | GATC | 1 cut(s) | 189 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstSFI | CTRYAG | 1 cut(s) | 114 |
| BstV1I | GCAGC | 3 cut(s) | 20, 100, 128 |
| BtsCI | GGATG | 1 cut(s) | 102 |
| CviJI | RGCY | 6 cut(s) | 33, 79, 85, 113, 119, 146 |
| CviKI_1 | RGCY | 6 cut(s) | 33, 79, 85, 113, 119, 146 |
| DdeI | CTNAG | 1 cut(s) | 173 |
| DpnI | GATC | 1 cut(s) | 191 |
| DpnII | GATC | 1 cut(s) | 189 |
| Eam1104I | CTCTTC | 1 cut(s) | 192 |
| EarI | CTCTTC | 1 cut(s) | 192 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| FaiI | YATR | 2 cut(s) | 60, 183 |
| FaqI | GGGAC | 1 cut(s) | 169 |
| Fnu4HI | GCNGC | 3 cut(s) | 34, 114, 117 |
| FokI | GGATG | 1 cut(s) | 109 |
| Fsp4HI | GCNGC | 3 cut(s) | 34, 114, 117 |
| FspBI | CTAG | 1 cut(s) | 150 |
| GluI | GCNGC | 3 cut(s) | 34, 114, 117 |
| HinfI | GANTC | 2 cut(s) | 55, 100 |
| Hpy188I | TCNGA | 1 cut(s) | 105 |
| HpyCH4V | TGCA | 3 cut(s) | 36, 116, 185 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 1 cut(s) | 173 |
| Kzo9I | GATC | 1 cut(s) | 189 |
| LmnI | GCTCC | 1 cut(s) | 12 |
| Lsp1109I | GCAGC | 3 cut(s) | 20, 100, 128 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 150 |
| MalI | GATC | 1 cut(s) | 191 |
| MboI | GATC | 1 cut(s) | 189 |
| MboII | GAAGA | 3 cut(s) | 59, 206, 209 |
| MnlI | CCTC | 3 cut(s) | 3, 86, 103 |
| MseI | TTAA | 1 cut(s) | 63 |
| MspA1I | CMGCKG | 1 cut(s) | 33 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NdeII | GATC | 1 cut(s) | 189 |
| NmeAIII | GCCGAG | 1 cut(s) | 111 |
| PfeI | GAWTC | 2 cut(s) | 55, 100 |
| PkrI | GCNGC | 3 cut(s) | 35, 115, 118 |
| PshBI | ATTAAT | 1 cut(s) | 63 |
| PstI | CTGCAG | 1 cut(s) | 118 |
| PvuII | CAGCTG | 1 cut(s) | 33 |
| SaqAI | TTAA | 1 cut(s) | 63 |
| SatI | GCNGC | 3 cut(s) | 34, 114, 117 |
| Sau3AI | GATC | 1 cut(s) | 189 |
| SetI | ASST | 4 cut(s) | 35, 81, 121, 148 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| SfcI | CTRYAG | 1 cut(s) | 114 |
| SgeI | CNNG | 5 cut(s) | 99, 139, 153, 162, 198 |
| SsiI | CCGC | 1 cut(s) | 42 |
| SspI | AATATT | 1 cut(s) | 67 |
| SspMI | CTAG | 1 cut(s) | 150 |
| TaqI | TCGA | 1 cut(s) | 192 |
| TfiI | GAWTC | 2 cut(s) | 55, 100 |
| Tru1I | TTAA | 1 cut(s) | 63 |
| Tru9I | TTAA | 1 cut(s) | 63 |
| TseI | GCWGC | 3 cut(s) | 33, 113, 116 |
| TspDTI | ATGAA | 2 cut(s) | 17, 113 |
| VspI | ATTAAT | 1 cut(s) | 63 |
| XspI | CTAG | 1 cut(s) | 150 |