Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0002839

Physical Location & Seq

Genomic Coordinates Forward (+)

58829335 .. 58835739

Gene Structure 6405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG327500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGTGCAGGTTGAGGGGACGTTTCGTGATGGGACCAAGTTAATCACCATTCATGATCCAATTTCTTGTGATAATGGAGATCTGGAACTAGCTTTAAAGAACTCTTTTCTTCCTGTTCCCTCAATTGATAAGTTTTCGGAAATGGTGGATGGTGGAGTTCCTGGTGAAATAATCTTCAAAGGTGGTAATATTGTAATTAATGAAGGAAGGAAGGGAATAATTCTGAAAGTTGTCAATACTGGAGACAGGCCAGTTCAGGTTGGCAGTCACTATCACTTTATTGAGGTCAATCCCCACTTGGTCTTTGATCGAATGAAATCATATGGTATGCGCCTGAATATACCTGCTGGAACAGCCAAGAGATTTGAGCCGGGGGAATGTAAACATGTCGTACTTGTAAGCATTGGAGGTAATAGAGTAATCAGAGGAGGAAATGACATTGTTGATGGTGCAGTACGAAGCTTTGACAGATACCAAGTAGTCAAGGGAGCTTTGGAAGCCAGACGATTTGGGAATGAAGAAGAACCAAATGCTAGGGAAGGTGTTGCAGGAATAGATGCAGCTTTTACCACTGTAATTTCTCATGAGTCATATGCAAACATGTATGGCCCTACTACCGGTGATAAAGTTCGGCTCGGTGATACCAACTTGTTTGCTGAAATTGAAAAAGATTATACTGTTCATGGGGATGAATCTGTATTTGGAGGTGGCAAAGTTATAAGAGACGGAATGGGCCAGTCATCAAGGAGTGAACTAGCTGACTCATTGGACACAGTTATAACTAATGCTGTAATCATTGATTATAGTGGGATCTTCAAGGCAGATATTGGTATTAAAGATCATCATATAGTTGCCCTTGGGAAATCAGGCAATCCAGATGTTATGGATGGTATGGATGGTGCATCTAGCAATATGATCATTGGGGTTAACACAGAGGTCATTGCAGCGGAAGGACAAATTGTGACTGCTGGAGCTATAGACTGTCATGTGCATTTCATATGCCCTCAGTTGGCATATGAAGCAATATCAAGTGGTATCACAACCCTAGTGGGAGGTGGAACAGGACCTGCTACAGGGACTCGTGCAACAACATGCACACCATCTCCATTGCAAATGAAGTTAATGCTGCAATCAACTGATGAAGTGCCTCTAAATTTTGGCTTTACAGGGAAGGGGAACAGTGCCAAACCTGATGGGCTACGCAAGATAATCAAGGCTGGAGCAATGGGTCTGAAGCTGCATGAAGACTGGGGCACAACTCCTGCTGCAATAGACAATTGTTTGAGTGTTGGAGACCAATATGACGTCCAGGTTAATATCCACACGGACACCTTGAATGAATCTGGATTTGTGGAACACACAATCGCTGCATTTAAAGACAGAACTATCCATACTTACCACAGTGAAGGTGCAGGTGGGGGTCATGCTCCAGATATTATCAAAGTATGTGGTGTGGAAAATGTCCTGCCCTCATCAACGAATCCCACACGGCCTTTCACCTCCAATACTATAGATGAGCATCTTGATATGCTGATGGTTTGCCATCACCTTGACAAGGACAATCCAGAAGATGTAGCTTTTGCTGAATCAAGGATAAGAGCTGAAACAATTGCCGCAGAAGATATATTGCATGATATGGGGGCAATTAGCATGGTAGCTTCTGATTCACAGGCTATGGGTCGCATTGGAGAGGTGATAACCAGAACTTGGCAAACTGCTGACAAGATGAAATCACAAAGAGGGTCAATAGAACCTAGTGGATCCAACAATGACAATCTCCGGATCAAGAGATACATTGCAAAGTACACCATAAATCCAGCAATAGCAAATGGATTTTCTAAATATGTTGGTTCCGTTCAGGCGGGCAAGTTCGCTGATCTTGTTCTATGGAAGCCATCTTTCTTTGGGGCAAAACCAGAAATGGTGATCAAAGGTGGTGCAATTGCATGGGCTAATATGGGTGATCCAAACGCAAGCATCCCGACACCTGAACCGGTCATTTCAAGACCTATGTTTGGTGCATTTGGCAAGGCTAGTAGTGCTCATTCCATTGCCTTTGTCAGCAAGGCAGCTAAAGAAAATGGGGTTAAAGCCTTGTATGACCTGAACAAGAGAGTGGAAGCTGTGGGCAATGTTAGGAAGCTCCGCAAACGCGACATGGAGCTCAATGACGCCCTGCCAAATATTAAAGTTGACCCAGAGACATACACGGTGACAGCAGACGGCGAGGTTCTGACCTGCAGTGCAGCCACCACCGTTCCCCTATCCCGGAATTACTTCCTGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006807 GO:0008150 GO:0008152 GO:0009039 GO:0016787 GO:0016810 GO:0016811

KEGG Pathways

Metabolic & Signaling

ko00220 ko00230 ko00791 ko01100 ko01120 map00220 map00230 map00791 map01100 map01120

Pfam Domains

Protein Families

Amidohydro_1 Urease_alpha Urease_beta Urease_gamma

Protein Analysis

762

Amino Acids

81.77

Weight (kDa)

5.68

Isoelectric Point (pI)

29.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Urease_beta	PF00699	54 - 150	5.1e-41	Urease beta subunit
Urease_alpha	PF00449	193 - 314	7.9e-53	Urease alpha-subunit, N-terminal domain
Amidohydro_1	PF01979	320 - 646	1.4e-76	Amidohydrolase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002839)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67550
fragaria_vesca	FvH4_4g24160 FvH4_4g24160 FvH4_4g24160
malus_domestica	MD13G1114100.v1.1 MD13G1114500.v1.1 MD13G1114900.v1.1 MD13G1115100.v1.1 MD16G1113300.v1.1 MD16G1113700.v1.1
prunus_persica	Prupe.1G232300_v2.0.a1 Prupe.1G232300_v2.0.a1 Prupe.1G232300_v2.0.a1 Prupe.1G232300_v2.0.a1
pyrus_communis	pycom13g09950 pycom16g09630 pycom16g09640 pycom16g09650
rosa_chinensis	RchiOBHm_Chr1g0326041 RchiOBHm_Chr4g0430931
rosa_laevigata	RLG00000006937
rosa_multiflora	Rmu_sc0006022.1_g000001 Rmu_ssc0000176.1_g000001
rosa_roxburghii	Rroxscaffold_3G00223360 Rroxscaffold_5G00372620
rosa_rugosa	Rorug02G0437300 Rorug04G0247300 Rorug05G0134300
rosa_samantha	Rh2BG408000 Rh4AG303000 Rh4AG303900 Rh4BG311200 Rh4CG327500 Rh4DG307300 Rh7CG419200 Rh7CG419300 Rh7CG439900
rosa_wichuraiana	Rw4G026340 Rw7G035140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	719, 779
AarI	CACCTGC	1 cut(s)	1403
AatII	GACGTC	1 cut(s)	1308
Acc36I	ACCTGC	4 cut(s)	352, 1075, 1403, 2246
AccB7I	CCANNNNNTGG	1 cut(s)	1707
AccII	CGCG	1 cut(s)	2154
AccIII	TCCGGA	1 cut(s)	1779
AciI	CCGC	4 cut(s)	947, 1614, 1862, 2146
AclWI	GGATC	6 cut(s)	50, 818, 1755, 1768, 1790, 1958
AcsI	RAATTY	1 cut(s)	1153
AcuI	CTGAAG	1 cut(s)	1253
AcyI	GRCGYC	2 cut(s)	1305, 2172
AfaI	GTAC	3 cut(s)	393, 456, 1805
AfiI	CCNNNNNNNGG	7 cut(s)	617, 1009, 1073, 1555, 1707, 2015, 2268
AflIII	ACRYGT	2 cut(s)	385, 600
AgeI	ACCGGT	2 cut(s)	617, 1993
AgsI	TTSAA	5 cut(s)	178, 665, 817, 1336, 2004
AjnI	CCWGG	2 cut(s)	160, 1308
AjuI	GAANNNNNNNTTGG	2 cut(s)	684, 716
Alw21I	GWGCWC	2 cut(s)	2044, 2166
Alw26I	GTCTC	4 cut(s)	237, 717, 1287, 2195
AlwI	GGATC	6 cut(s)	50, 818, 1755, 1768, 1790, 1958
AlwNI	CAGNNNCTG	1 cut(s)	1067
Aor13HI	TCCGGA	1 cut(s)	1779
AoxI	GGCC	4 cut(s)	248, 607, 733, 1490
ApeKI	GCWGC	8 cut(s)	560, 944, 1126, 1237, 1265, 1367, 2069, 2246
ApoI	RAATTY	1 cut(s)	1153
AseI	ATTAAT	1 cut(s)	198
AsiGI	ACCGGT	2 cut(s)	617, 1993
Asp700I	GAANNNNTTC	1 cut(s)	2276
AspLEI	GCGC	1 cut(s)	333
AspS9I	GGNCC	4 cut(s)	33, 608, 733, 1064
AsuC2I	CCSGG	2 cut(s)	372, 2269
AvaII	GGWCC	2 cut(s)	33, 1064
BaeGI	GKGCMC	1 cut(s)	1256
BamHI	GGATCC	1 cut(s)	1760
BanII	GRGCYC	1 cut(s)	2166
BauI	CACGAG	1 cut(s)	1080
BbsI	GAAGAC	1 cut(s)	1251
Bbv12I	GWGCWC	2 cut(s)	2044, 2166
BbvI	GCAGC	8 cut(s)	572, 956, 1113, 1224, 1252, 1354, 2081, 2258
BceAI	ACGGC	2 cut(s)	1505, 2239
BciT130I	CCWGG	2 cut(s)	162, 1310
BclI	TGATCA	2 cut(s)	915, 1926
BcnI	CCSGG	2 cut(s)	372, 2269
BcoDI	GTCTC	4 cut(s)	237, 717, 1287, 2195
BfaI	CTAG	7 cut(s)	89, 534, 755, 906, 1046, 1755, 2034
BfmI	CTRYAG	4 cut(s)	975, 1071, 1509, 2239
BfuAI	ACCTGC	4 cut(s)	352, 1075, 1403, 2246
BglII	AGATCT	1 cut(s)	79
BisI	GCNGC	9 cut(s)	561, 945, 1127, 1238, 1266, 1368, 1614, 2070, 2247
BlsI	GCNGC	9 cut(s)	562, 946, 1128, 1239, 1267, 1369, 1615, 2071, 2248
Bme1390I	CCNGG	4 cut(s)	162, 372, 1310, 2269
Bme18I	GGWCC	2 cut(s)	33, 1064
BmgT120I	GGNCC	4 cut(s)	33, 608, 733, 1064
BmiI	GGNNCC	3 cut(s)	34, 1762, 1852
BmrFI	CCNGG	4 cut(s)	162, 372, 1310, 2269
BmrI	ACTGGG	1 cut(s)	1258
BmsI	GCATC	4 cut(s)	547, 911, 1528, 1986
BmuI	ACTGGG	1 cut(s)	1258
BpiI	GAAGAC	1 cut(s)	1251
BpmI	CTGGAG	4 cut(s)	261, 990, 1239, 1413
BpuMI	CCSGG	2 cut(s)	372, 2269
BsaBI	GATNNNNATC	1 cut(s)	1518
BsaHI	GRCGYC	2 cut(s)	1305, 2172
BsaI	GGTCTC	1 cut(s)	1287
BsaJI	CCNNGG	2 cut(s)	371, 856
BsaWI	WCCGGW	3 cut(s)	617, 1779, 1993
BsaXI	ACNNNNNCTCC	2 cut(s)	1087, 1117
Bsc4I	CCNNNNNNNGG	7 cut(s)	617, 1009, 1073, 1555, 1707, 2015, 2268
Bse118I	RCCGGY	2 cut(s)	617, 1993
Bse1I	ACTGG	4 cut(s)	244, 251, 736, 1253
Bse3DI	GCAATG	6 cut(s)	939, 1106, 1230, 1794, 2049, 2137
Bse8I	GATNNNNATC	1 cut(s)	1518
BseAI	TCCGGA	1 cut(s)	1779
BseBI	CCWGG	2 cut(s)	162, 1310
BseDI	CCNNGG	2 cut(s)	371, 856
BseGI	GGATG	5 cut(s)	154, 694, 892, 901, 1977
BseJI	GATNNNNATC	1 cut(s)	1518
BseLI	CCNNNNNNNGG	7 cut(s)	617, 1009, 1073, 1555, 1707, 2015, 2268
BseMI	GCAATG	6 cut(s)	939, 1106, 1230, 1794, 2049, 2137
BseMII	CTCAG	1 cut(s)	1019
BseNI	ACTGG	4 cut(s)	244, 251, 736, 1253
BseRI	GAGGAG	1 cut(s)	441
BseSI	GKGCMC	1 cut(s)	1256
BseXI	GCAGC	8 cut(s)	572, 956, 1113, 1224, 1252, 1354, 2081, 2258
BsgI	GTGCAG	4 cut(s)	26, 471, 1431, 2265
Bsh1236I	CGCG	1 cut(s)	2154
BshFI	GGCC	4 cut(s)	250, 609, 735, 1492
BshTI	ACCGGT	2 cut(s)	617, 1993
BsiHKAI	GWGCWC	2 cut(s)	2044, 2166
BsiSI	CCGG	5 cut(s)	371, 618, 1780, 1994, 2269
BslFI	GGGAC	3 cut(s)	31, 46, 1090
BslI	CCNNNNNNNGG	7 cut(s)	617, 1009, 1073, 1555, 1707, 2015, 2268
BsmAI	GTCTC	4 cut(s)	237, 717, 1287, 2195
BsmBI	CGTCTC	1 cut(s)	717
BsmFI	GGGAC	3 cut(s)	31, 46, 1090
BsnI	GGCC	4 cut(s)	250, 609, 735, 1492
Bso31I	GGTCTC	1 cut(s)	1287
Bsp1286I	GDGCHC	3 cut(s)	1256, 2044, 2166
Bsp13I	TCCGGA	1 cut(s)	1779
BspACI	CCGC	4 cut(s)	947, 1614, 1862, 2146
BspANI	GGCC	4 cut(s)	250, 609, 735, 1492
BspCNI	CTCAG	1 cut(s)	1018
BspEI	TCCGGA	1 cut(s)	1779
BspFNI	CGCG	1 cut(s)	2154
BspHI	TCATGA	2 cut(s)	52, 583
BspLI	GGNNCC	3 cut(s)	34, 1762, 1852
BspMAI	CTGCAG	1 cut(s)	2243
BspMI	ACCTGC	4 cut(s)	352, 1075, 1403, 2246
BspPI	GGATC	6 cut(s)	50, 818, 1755, 1768, 1790, 1958
BspTNI	GGTCTC	1 cut(s)	1287
BsrDI	GCAATG	6 cut(s)	939, 1106, 1230, 1794, 2049, 2137
BsrFI	RCCGGY	2 cut(s)	617, 1993
BsrI	ACTGG	4 cut(s)	244, 251, 736, 1253
BssAI	RCCGGY	2 cut(s)	617, 1993
BssECI	CCNNGG	2 cut(s)	371, 856
BssNI	GRCGYC	2 cut(s)	1305, 2172
BssSI	CACGAG	1 cut(s)	1080
BssT1I	CCWWGG	1 cut(s)	856
Bst2BI	CACGAG	1 cut(s)	1080
Bst2UI	CCWGG	2 cut(s)	162, 1310
Bst4CI	ACNGT	8 cut(s)	574, 679, 775, 983, 1181, 1403, 2212, 2257
BstACI	GRCGYC	2 cut(s)	1305, 2172
BstC8I	GCNNGC	2 cut(s)	1864, 1975
BstDEI	CTNAG	1 cut(s)	1005
BstENI	CCTNNNNNAGG	2 cut(s)	1071, 1553
BstF5I	GGATG	5 cut(s)	154, 694, 892, 901, 1977
BstFNI	CGCG	1 cut(s)	2154
BstHHI	GCGC	1 cut(s)	333
BstMAI	GTCTC	4 cut(s)	237, 717, 1287, 2195
BstMWI	GCNNNNNNNGC	4 cut(s)	353, 497, 1019, 2039
BstNI	CCWGG	2 cut(s)	162, 1310
BstNSI	RCATGY	3 cut(s)	389, 604, 1095
BstSCI	CCNGG	4 cut(s)	160, 370, 1308, 2267
BstSFI	CTRYAG	4 cut(s)	975, 1071, 1509, 2239
BstSLI	GKGCMC	1 cut(s)	1256
BstUI	CGCG	1 cut(s)	2154
BstV1I	GCAGC	8 cut(s)	572, 956, 1113, 1224, 1252, 1354, 2081, 2258
BstV2I	GAAGAC	1 cut(s)	1251
BstX2I	RGATCY	3 cut(s)	79, 810, 1760
BstYI	RGATCY	3 cut(s)	79, 810, 1760
BsuRI	GGCC	4 cut(s)	250, 609, 735, 1492
BtsCI	GGATG	5 cut(s)	154, 694, 892, 901, 1977
BtsI	GCAGTG	1 cut(s)	2248
BtsIMutI	CAGTG	4 cut(s)	570, 1186, 1408, 2248
BveI	ACCTGC	4 cut(s)	352, 1075, 1403, 2246
Cac8I	GCNNGC	2 cut(s)	1864, 1975
CaiI	CAGNNNCTG	1 cut(s)	1067
CciI	TCATGA	2 cut(s)	52, 583
CfoI	GCGC	1 cut(s)	333
Cfr10I	RCCGGY	2 cut(s)	617, 1993
Cfr13I	GGNCC	4 cut(s)	33, 608, 733, 1064
CseI	GACGC	1 cut(s)	2180
Csp6I	GTAC	3 cut(s)	392, 455, 1804
CspAI	ACCGGT	2 cut(s)	617, 1993
CspCI	CAANNNNNGTGG	4 cut(s)	1029, 1064, 1429, 1464
CviQI	GTAC	3 cut(s)	392, 455, 1804
DdeI	CTNAG	1 cut(s)	1005
DraI	TTTAAA	2 cut(s)	96, 1375
Ecl136II	GAGCTC	1 cut(s)	2164
Eco130I	CCWWGG	1 cut(s)	856
Eco24I	GRGCYC	1 cut(s)	2166
Eco31I	GGTCTC	1 cut(s)	1287
Eco47I	GGWCC	2 cut(s)	33, 1064
Eco53kI	GAGCTC	1 cut(s)	2164
Eco57I	CTGAAG	1 cut(s)	1253
EcoICRI	GAGCTC	1 cut(s)	2164
EcoNI	CCTNNNNNAGG	2 cut(s)	1071, 1553
EcoO109I	RGGNCCY	1 cut(s)	1064
EcoRII	CCWGG	2 cut(s)	160, 1308
EcoT14I	CCWWGG	1 cut(s)	856
EcoT38I	GRGCYC	1 cut(s)	2166
ErhI	CCWWGG	1 cut(s)	856
Esp3I	CGTCTC	1 cut(s)	717
FaqI	GGGAC	3 cut(s)	31, 46, 1090
FauI	CCCGC	1 cut(s)	1855
FauNDI	CATATG	4 cut(s)	322, 592, 998, 1015
FbaI	TGATCA	2 cut(s)	915, 1926
Fnu4HI	GCNGC	9 cut(s)	561, 945, 1127, 1238, 1266, 1368, 1614, 2070, 2247
FokI	GGATG	5 cut(s)	161, 701, 899, 908, 1964
FriOI	GRGCYC	1 cut(s)	2166
Fsp4HI	GCNGC	9 cut(s)	561, 945, 1127, 1238, 1266, 1368, 1614, 2070, 2247
FspBI	CTAG	7 cut(s)	89, 534, 755, 906, 1046, 1755, 2034
GlaI	GCGC	1 cut(s)	332
GluI	GCNGC	9 cut(s)	561, 945, 1127, 1238, 1266, 1368, 1614, 2070, 2247
GsuI	CTGGAG	4 cut(s)	261, 990, 1239, 1413
HaeIII	GGCC	4 cut(s)	250, 609, 735, 1492
HapII	CCGG	5 cut(s)	371, 618, 1780, 1994, 2269
HgaI	GACGC	1 cut(s)	2180
HhaI	GCGC	1 cut(s)	333
Hin1I	GRCGYC	2 cut(s)	1305, 2172
Hin6I	GCGC	1 cut(s)	331
HinP1I	GCGC	1 cut(s)	331
HincII	GTYRAC	2 cut(s)	928, 2194
HindII	GTYRAC	2 cut(s)	928, 2194
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	8 cut(s)	587, 692, 761, 1078, 1340, 1480, 1586, 1664
HpaI	GTTAAC	1 cut(s)	928
HpaII	CCGG	5 cut(s)	371, 618, 1780, 1994, 2269
Hpy166II	GTNNAC	5 cut(s)	383, 752, 928, 1806, 2194
Hpy188I	TCNGA	6 cut(s)	139, 225, 425, 1233, 1663, 2235
Hpy8I	GTNNAC	5 cut(s)	383, 752, 928, 1806, 2194
HpyAV	CCTTC	7 cut(s)	197, 201, 205, 533, 944, 1165, 1400
HpyCH4III	ACNGT	8 cut(s)	574, 679, 775, 983, 1181, 1403, 2212, 2257
HpyCH4IV	ACGT	2 cut(s)	20, 1305
HpyF10VI	GCNNNNNNNGC	4 cut(s)	353, 497, 1019, 2039
HpyF3I	CTNAG	1 cut(s)	1005
HpySE526I	ACGT	2 cut(s)	20, 1305
Hsp92I	GRCGYC	2 cut(s)	1305, 2172
HspAI	GCGC	1 cut(s)	331
Kpn2I	TCCGGA	1 cut(s)	1779
Ksp22I	TGATCA	2 cut(s)	915, 1926
KspAI	GTTAAC	1 cut(s)	928
LmnI	GCTCC	6 cut(s)	488, 971, 1220, 1432, 2148, 2161
Lsp1109I	GCAGC	8 cut(s)	572, 956, 1113, 1224, 1252, 1354, 2081, 2258
LweI	GCATC	4 cut(s)	547, 911, 1528, 1986
MaeI	CTAG	7 cut(s)	89, 534, 755, 906, 1046, 1755, 2034
MaeII	ACGT	2 cut(s)	20, 1305
MaeIII	GTNAC	3 cut(s)	266, 961, 2212
MboII	GAAGA	8 cut(s)	101, 166, 530, 533, 805, 1256, 1580, 1631
MfeI	CAATTG	4 cut(s)	123, 1276, 1608, 1941
MflI	RGATCY	3 cut(s)	79, 810, 1760
MhlI	GDGCHC	3 cut(s)	1256, 2044, 2166
MlyI	GAGTC	3 cut(s)	596, 755, 1072
MmeI	TCCRAC	2 cut(s)	1270, 1788
MroI	TCCGGA	1 cut(s)	1779
MroXI	GAANNNNTTC	1 cut(s)	2276
MslI	CAYNNNNRTG	1 cut(s)	687
MspA1I	CMGCKG	1 cut(s)	947
MspI	CCGG	5 cut(s)	371, 618, 1780, 1994, 2269
MspR9I	CCNGG	4 cut(s)	162, 372, 1310, 2269
MunI	CAATTG	4 cut(s)	123, 1276, 1608, 1941
MvaI	CCWGG	2 cut(s)	162, 1310
MvnI	CGCG	1 cut(s)	2154
MwoI	GCNNNNNNNGC	4 cut(s)	353, 497, 1019, 2039
NciI	CCSGG	2 cut(s)	372, 2269
NdeI	CATATG	4 cut(s)	322, 592, 998, 1015
NlaIV	GGNNCC	3 cut(s)	34, 1762, 1852
NmuCI	GTSAC	3 cut(s)	266, 961, 2212
NspI	RCATGY	3 cut(s)	389, 604, 1095
PagI	TCATGA	2 cut(s)	52, 583
PaqCI	CACCTGC	1 cut(s)	1403
PciI	ACATGT	2 cut(s)	385, 600
PdmI	GAANNNNTTC	1 cut(s)	2276
PfeI	GAWTC	5 cut(s)	692, 1340, 1480, 1586, 1664
PflMI	CCANNNNNTGG	1 cut(s)	1707
PfoI	TCCNGGA	1 cut(s)	2267
PinAI	ACCGGT	2 cut(s)	617, 1993
PkrI	GCNGC	9 cut(s)	562, 946, 1128, 1239, 1267, 1369, 1615, 2071, 2248
PleI	GAGTC	3 cut(s)	595, 755, 1072
PpsI	GAGTC	3 cut(s)	595, 755, 1072
PpuMI	RGGWCCY	1 cut(s)	1064
PscI	ACATGT	2 cut(s)	385, 600
PshBI	ATTAAT	1 cut(s)	198
PsiI	TTATAA	2 cut(s)	719, 779
Psp124BI	GAGCTC	1 cut(s)	2166
Psp5II	RGGWCCY	1 cut(s)	1064
Psp6I	CCWGG	2 cut(s)	160, 1308
PspGI	CCWGG	2 cut(s)	160, 1308
PspN4I	GGNNCC	3 cut(s)	34, 1762, 1852
PspPI	GGNCC	4 cut(s)	33, 608, 733, 1064
PspPPI	RGGWCCY	1 cut(s)	1064
PsrI	GAACNNNNNNTAC	2 cut(s)	1375, 1407
PstI	CTGCAG	1 cut(s)	2243
PstNI	CAGNNNCTG	1 cut(s)	1067
PsuI	RGATCY	3 cut(s)	79, 810, 1760
RsaI	GTAC	3 cut(s)	393, 456, 1805
RsaNI	GTAC	3 cut(s)	392, 455, 1804
RseI	CAYNNNNRTG	1 cut(s)	687
SacI	GAGCTC	1 cut(s)	2166
SatI	GCNGC	9 cut(s)	561, 945, 1127, 1238, 1266, 1368, 1614, 2070, 2247
Sau96I	GGNCC	4 cut(s)	33, 608, 733, 1064
SchI	GAGTC	3 cut(s)	596, 755, 1072
ScrFI	CCNGG	4 cut(s)	162, 372, 1310, 2269
SduI	GDGCHC	3 cut(s)	1256, 2044, 2166
SfaNI	GCATC	4 cut(s)	547, 911, 1528, 1986
SfcI	CTRYAG	4 cut(s)	975, 1071, 1509, 2239
SinI	GGWCC	2 cut(s)	33, 1064
SmiMI	CAYNNNNRTG	1 cut(s)	687
SsiI	CCGC	4 cut(s)	947, 1614, 1862, 2146
SspI	AATATT	2 cut(s)	190, 2185
SspMI	CTAG	7 cut(s)	89, 534, 755, 906, 1046, 1755, 2034
SstI	GAGCTC	1 cut(s)	2166
StyD4I	CCNGG	4 cut(s)	160, 370, 1308, 2267
StyI	CCWWGG	1 cut(s)	856
TaaI	ACNGT	8 cut(s)	574, 679, 775, 983, 1181, 1403, 2212, 2257
TaiI	ACGT	2 cut(s)	23, 1308
TaqI	TCGA	1 cut(s)	310
TatI	WGTACW	1 cut(s)	1803
TauI	GCSGC	1 cut(s)	1616
TfiI	GAWTC	5 cut(s)	692, 1340, 1480, 1586, 1664
TscAI	CASTG	4 cut(s)	577, 1186, 1408, 2248
TseFI	GTSAC	3 cut(s)	266, 961, 2212
TseI	GCWGC	8 cut(s)	560, 944, 1126, 1237, 1265, 1367, 2069, 2246
Tsp45I	GTSAC	3 cut(s)	266, 961, 2212
TspGWI	ACGGA	3 cut(s)	741, 1340, 1843
TspRI	CASTG	4 cut(s)	577, 1186, 1408, 2248
Van91I	CCANNNNNTGG	1 cut(s)	1707
VpaK11BI	GGWCC	2 cut(s)	33, 1064
VspI	ATTAAT	1 cut(s)	198
XagI	CCTNNNNNAGG	2 cut(s)	1071, 1553
XapI	RAATTY	1 cut(s)	1153
XceI	RCATGY	3 cut(s)	389, 604, 1095
XmnI	GAANNNNTTC	1 cut(s)	2276
XspI	CTAG	7 cut(s)	89, 534, 755, 906, 1046, 1755, 2034
ZraI	GACGTC	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.